Changes between Version 10 and Version 11 of Needed Command Functionality

Timestamp:

May 5, 2015, 2:13:37 PM (10 years ago)

Author:

Elaine Meng

Comment:

--

Needed Command Functionality

@@ -9 +9 @@
 * '''open''' (suggest same general syntax as Chimera1, possibly adjusting prefixes; covers both local files and web-fetch)
 * '''display''', '''modeldisplay''' (suggest replacing with '''show/hide''' and eliminating our current '''show''')
-* '''color''' (suggest consolidating with '''rainbow''' but leaving color-by-attr and color-by-scalar-field separate)
 * '''ribbon''' (suggest replacing with '''cartoon''' and including spline and any other whole-chain parameters)
 * '''surface''' (see [https://www.rbvi.ucsf.edu/trac/chimera2/wiki/SurfaceCategories command and category thoughts])
 * '''repr''', '''ribrepr''','''ribscale''', '''surfrepr''' (suggest consolidating into a new '''style''' command, generalizing ribbon to cartoon as per [http://www.cgl.ucsf.edu/home/meng/chi2/ribbons.html ribbons writeup], and including pseudobonds)
+* '''color''' (suggest consolidating with '''rainbow''' but leaving color-by-attr and color-by-scalar-field separate)
 * '''volume''' (redundancy with show/hide/color etc. OK with me, but should review structure and keywords vs. the negotiable [http://www.cgl.ucsf.edu/home/meng/chi2/command-structure.html command guidelines])
 * some way to adjust subdivision/smoothness; any global setting could be covered by '''set''' (see below) and any attribute by '''setattr''', but there could also be options in '''surface''', '''cartoon''' and/or a top-level '''quality''' command or logical equivalent
 
 Extremely useful catchalls, suggest retaining as permanent commands even though there will be some redundancy:
-* '''set''' global settings: silhouettes, background color, depth-cuing, shadows, lighting (if many sub-options, e.g. lighting, judiciously consider making a separate top-level command; also keeping a redundant but longer '''set''' command is OK with me) 
+* '''set''' global settings: silhouettes, background color, depth-cuing parameters, shadows, lighting (if many sub-options, e.g. lighting, judiciously consider making a separate top-level command; also keeping a redundant but longer '''set''' command is OK with me) 
 * '''setattr''' (general set-attributes functionality)