Changes between Version 68 and Version 69 of NTTData

Timestamp:

Dec 9, 2021, 12:31:50 PM (4 years ago)

Author:

Elaine Meng

Comment:

--

NTTData

@@ -421 +421 @@
 Eric 3D pipeline updates: as mentioned in emails, has worked on script: EMDB fetch https, bypolymer coloring, fixed ensemble handling, map contour-surface adjustments
 
-Scooter: ChimeraX 1.3 release is available
-
-Phil: vaccine res center wants SARS CoV-2 spike models, has been using Chimera because the whole 3D print process has been worked out more thoroughly.  Also would be useful if ChimeraX vdw adjustment included +/- current size instead of needing to specify absolute value.
+Phil: vaccine res center wants SARS CoV-2 spike models, has been using Chimera because the whole 3D print process has been worked out more thoroughly.  Also would be useful if ChimeraX vdw adjustment ("size" command) allowed incremental changes +/- current size instead of needing to specify absolute value.
 
 Meghan: showed image of trimer 3D print for museum. Switched to epoxy instead of cyanoacrylate, is stronger. Still was hard to make it hold together, had to put white cylinder through the middle. Tom G: try ChimeraX tube helices. Could also make coil fatter. 
 
 We should collaborate on a 3D print bundle for ChimeraX that adds custom presets with the settings that Phil likes. TomG and Scooter: should also make simpler Toolshed tutorials like one just for presets, and encourage more people to deposit their favorites.  Elaine: analogous to COLOURlovers for palettes.
+
+Meghan and Phil: could something malicious be placed in a ChimeraX session, and if so can we scan to check for them? Greg: .cxs is pure data like JSON but a custom bundle could execute the data.  None of our bundles do that, but a 3rd-party one could.  Another possibility is buffer overflow bug.  Neither of those would be identified by scanning the session file. Meghan: We could have a repository of session files with DOIs at NIH 3D.