Changes between Version 55 and Version 56 of NTTData

Timestamp:

Oct 7, 2021, 1:55:35 PM (4 years ago)

Author:

Elaine Meng

Comment:

--

NTTData

@@ -356 +356 @@
 
 Phil: if you didn't yet, take a look at the stuff we prepared for the H3 Africa workshop. Areas with more advanced research include Uganda, Kenya, South Africa.
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+== 10/07/2021 ==
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+Phil, Philip; Elaine, Eric, TomG, Zach, Scooter (first part)
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+Scooter showed vacation photos from his cabin (North woods area of Wisconsin).
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+Phil asked about AlphaFold getting more use after the 1.3 release. We plan to put a candidate on the download page next week.
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+Eric: four issues relating to 3D pipeline processing. 
+- Phil: outputs are all a fat ribbon with struts, but also wants a more normal ribbon for visualization. There are four ribbons with these printing changes, also want four more (with same colorings) that do not have these printing changes (fattening and struts). For small molecules, want another version of the sticks that is not so fat. 
+- 5ire virus generation, seems OK now. 
+- What colors to use for 7+ chains? Phil: can we have a palette repeat?  Eric, yes among the other possibilities. Phil likes the interpolated one but wants to check with Darrell and get back to us. Tom G suggests doing something fancier based on symmetries, maybe as a longer-term goal. Phil: another fancy coloring is by domain.
+- What to do when map level produces disconnected surface bits, with only a very small bit left after hide dust? Elaine: Doesn't that mean the level is wrong?  Tom: may be correct level for step 1 but gets fragmented at the higher step automatically used for larger data. Even a single piece may be too fragile if it's a thin shell. Phil: printing software automatically thickens a too-thin shell. More discussion of just using step 1 (too many vertices is problematic for printing), map smoothing, iterating threshold adjustment vs. "measure volume" with "includeMasked false" (probably too slow).  May need to leave this one to manual interactive adjustment. Tom G has fancier ideas like struts.