Changes between Version 1 and Version 2 of NTTData


Ignore:
Timestamp:
Apr 22, 2021, 3:13:19 PM (4 years ago)
Author:
Tom Goddard
Comment:

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  • NTTData

    v1 v2  
    1 NTT_DATA_UCSF_NIAID-SEB_Subcontract_2021
    2 Task Order !#2
     1= NTT DATA UCSF NIAID SEB Subcontract 2021 Task Order !#2 =
    32
    43March 1, 2021 - February 28, 2022
     4from [https://docs.google.com/document/d/17qUf02UIClFEmNinBcHIdM920V1ffDemtzmSoePYa7A/edit#heading=h.7ls6rkll1yod Google Doc]
    55
    661. General ChimeraX improvements to support NIAID (Eric: 20%)
    … …  
    99
    10103. Improve multi-person VR (Tom: 35%)
    11 - Create video tutorials in how to use multi-person VR
    12 - Hold VR office hours to train researchers to use VR capabilities
    13 - Allow participants to add models from local files during a VR session
    14 - Set up VR meeting servers for Africa, Europe, Asia
     11  a. Create video tutorials in how to use multi-person VR
     12  a. Hold VR office hours to train researchers to use VR capabilities
     13  a. Allow participants to add models from local files during a VR session
     14  a. Set up VR meeting servers for Africa, Europe, Asia
    1515
    16164. Human Biomolecular Atlas Program (HuBMAP) multiscale visualization (Eric: 30%)
    17 * Develop ChimeraX tool to browse and select HuBMAP datasets for loading
     17  a. Develop ChimeraX tool to browse and select HuBMAP datasets for loading
    1818
    19195. Enhance ChimeraX’s segmentation capabilities
    20 * Investigate increased use of simple ITK to support segmentation (Tom: 15%)
    21 * Investigate utilizing web services to support more complex machine learning-based segmentation algorithms (Tom: 15%)
    22 * Investigate reading and displaying segmentation format(s) available from imaging databases (tissue microscopy, cancer imaging data, etc.) (Tom: 10%)
     20  a. Investigate increased use of simple ITK to support segmentation (Tom: 15%)
     21  a. Investigate utilizing web services to support more complex machine learning-based segmentation algorithms (Tom: 15%)
     22  a. Investigate reading and displaying segmentation format(s) available from imaging databases (tissue microscopy, cancer imaging data, etc.) (Tom: 10%)
    2323
    24246. DICOM (Tom: 25%, Eric: 5%)
    25 * Improve ability to visualize and analyze medical images in VR with ChimeraX
    26 * Develop browser-style interface to show DICOM dataset contents and associated metadata such as sample characteristics
     25  a. Improve ability to visualize and analyze medical images in VR with ChimeraX
     26  a. Develop browser-style interface to show DICOM dataset contents and associated metadata such as sample characteristics
    2727
    28287. Outreach
    29 * Instructional material and tools documentation. (20%)
    30 * Detailed instructions for all features shall be provided in a user manual
    31 * Written user guides and tutorials shall be available as an HTML page
     29  a. Instructional material and tools documentation. (20%)
     30    i. Detailed instructions for all features shall be provided in a user manual
     31    i. Written user guides and tutorials shall be available as an HTML page
    3232
    33338. Administration (10%)
    34 * Submit monthly written reports of accomplishments
     34  a. Submit monthly written reports of accomplishments