Changes between Version 21 and Version 22 of NIAID2024


Ignore:
Timestamp:
Aug 15, 2024, 1:24:06 PM (14 months ago)
Author:
Elaine Meng
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • NIAID2024

    v21 v22  
    8585== 8/15/24 ==
    8686
     87Eric, Elaine, Zach; Phil, Mike Bopf, Kristen, Darrell (last part)
     88
     89Phil: short meeting today. Re NIH3D, discussion of Eric's email showing that the "contacts" approach is fine for identifying a contiguous structure with molecular surface or VDW spheres, but not ribbons or other representations if sidechains are not shown.  Phil: I think it's OK to get rid of the smaller disconnected piece in the ribbons case.  Eric: I can use an alternative method of identifying discontinuous parts in the case of ribbons/struts and only show the largest one. Kristen: I've seen a few with floaters like ions. Eric: printable presets should hide ions. Send us the info when you see cases like this.
     90
     91Kristen: for NIH3D, we figured out that we don't need ChimeraX to have TotalSegmentator.  We've been able to use it directly as a python package. However, you may want to include it for other reasons. Zach: it may be in the final SOW but deprioritized. Elaine: I see "add support for ML-based tumor segmentation tool" in the SOW, don't know if that's the same thing.
     92
     93Darrell: when were we thinking about a visit? Phil: February, we think was the conclusion. Can you send us information about places to stay (and in budget and convenient location).
     94
    8795== 8/1/24 ==
    8896