Changes between Version 4 and Version 5 of Functionality

Timestamp:

Apr 6, 2015, 11:35:55 AM (11 years ago)

Author:

Tom Goddard

Comment:

--

Functionality

@@ -9 +9 @@
  * Scenes
  * Presentation images (ribbons, pipes planks, nucleotides, surface capping, pseudobonds)
- * cellPACK / multiscale models (opening data, grouping, clipping, running cellPACK)
+ * Animations (timeline gui with more automatic transitions, commands with frames options, morphing)
+ * cellPACK / multiscale models (opening data, grouping, clipping, running cellPACK, cage builder, symmetry copies)
  * Multi-Domain Assembler (port?)
  * Comparitive structure analysis (match maker, morphing, tiling, clustering, showing differences)
  * Single sequences, interactive display, secondary structure, database annotations
  * Sequence alignments
- * Structure build/refine (addH, loop model, homology model, minimize, swapaa, build standard geom)
+ * Structure build/refine (addH, loop model, homology model, minimize, swapaa, build standard geom, symmetric copies)
  * Optical microscopy 3d time series
  * Cross-links and EM, Jan Kosinski EMBL, IMP, Rosetta
  * Protein-protein interfaces (clashes, electrostatic potential, add charge, hydrogen bonds, nice contact map depictions)
- * Measurements, axes/planes/centroids/angles/distances/buried area/cavity volumes with graphical depictions.
+ * Measurements, rmsd/axes/planes/centroids/angles/distances/buried area/cavity volumes/symmetry with graphical depictions.
  * Docking results analysis, !ViewDock
- * Small ligand binding analysis (pocket surfaces, areas, hydrogen bonds, metal coordination, electrostatics...)
+ * Small ligand binding analysis (zones, pocket surfaces, areas, hydrogen bonds, metal coordination, electrostatics...)
  * Evaluating 3A EM maps and atomic models
  * Map fitting