Changes between Version 2 and Version 3 of Dev2026-06-29


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Timestamp:
Jun 29, 2026, 4:27:52 PM (3 days ago)
Author:
Tom Goddard
Comment:

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  • Dev2026-06-29

    v2 v3  
    2525= Discussion =
    2626
     27* Ssh security warning on Mac
     28 - Greg says Tom's Mac still has an ssh security warning.
     29 - Needs ssh 10.3 but has 10.2p1.
     30 - Mac is at macOS 26.5.1.  Tom will update to 26.5.2.
     31 - Check other Macs to see if they have newer ssh.
     32 - Greg may file exemption if macOS does not offer a fix.
     33
     34* Package updates
     35 - Eric update PyPi packages used by ChimeraX Python shell.
     36 - New window resize bug reported by Tristan in Qt 6.11.
     37
     38* AI visualization
     39 - Tom Ferrin asked about AI visualization example from OMSF workshop.
     40 - TomG got slides for Open Molecular Software Foundation talk on AI visualization by Dion Whitehead.
     41 - Might be interesting to try to make a coupled sequence alignment and structure web view using these tools.
     42
     43* Chimera 1.20 release
     44 - Greg made Mac and Windows Chimera 1.20 release with newer Tcl/Tk that fixes Mac graphics not being positioned correctly in window.
     45 - Linux Chimera 1.20 build failed not finding freetype2 headers.  Greg is looking at it.
     46
     47* Doing Elaine's tasks
     48 - Discussed how to write documentation, answer user email, quality control on new features, make feature highlights, document new citations, without Elaine.
     49 - Aim is to keep up Elaine's high standards.
     50
     51* Roadmap for ChimeraX 1.13 release in December
     52 - Eric working on writing DMS surface files and making metal geometry tool.
     53 - Tom working on handling deletions and insertions in mutation data, and fetching mutation data from MaveDB.
    2754
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