Changes between Version 1 and Version 2 of Dev2024-4-22


Ignore:
Timestamp:
Apr 22, 2024, 4:23:49 PM (18 months ago)
Author:
Tom Goddard
Comment:

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  • Dev2024-4-22

    v1 v2  
    1818= Discussion =
    1919
     20* Toolshed improvements
     21  - Greg is adding check that tool category is given when user submits a new bundle.  Also will check for other mandatory items.
     22  - Will prepopulate Toolshed tool description with text from bundle info.
     23  - Greg working on making Toolshed cache initialization not download metadata on every version of every bundle every submitted.  Only use 3 most recent revisions, and only metadata used by ChimeraX.
     24
     25* ChimeraX 1.8 release candidate date
     26  - Tentatively aim for May 6 release candidate.
     27  - Will discuss again at next week's ChimeraX meeting.
     28  - R01 annual report due May 15, and want to be able to say ChimeraX 1.8 prerelease is out and when release is anticipated.
     29
     30* Plato backup computer
     31  - plato-backup has RAID hardware that is deprecated by Rocky 8 and eliminated in Rocky 9.
     32  - No home directory backups to tape made last 10 days.
     33  - plato-back connects to tape drives.
     34  - Scooter is working on getting quote for new hardware.
     35  - Scooter also is currently working on backups of all wynton home directories, including plato ones.
     36  - Scooter proposed today at Wynton meeting restricting backups to directories containing less than 10,000 files.
     37
     38* Profile grids sequence visualization
     39  - Eric working on profile grid sequence viewer.
     40  - Wants to get minimum usable features working, that includes cross-talk with selections between structure and sequence and sequence headers.
     41
     42* UMAP structure plots
     43  - Tom cleaning up new code that makes 2d plot clustering hundreds or thousands of structures by conformational differences.
     44  - New command is diffplot.
     45  - Probably will not be included in 1.8, but will go in daily builds for Klim Verba's lab to try.
     46
     47* Zach's current projects
     48  - Adding BLAST command options to simplify use of umap structure plots.
     49  - Fixing segmentation tool bugs for 1.8 release.
     50  - Working on raytracing OpenGL code.  Trying to improve speed.  Comparing to 3D Slicer that has fast implementation.
     51  - Medical imaging move to Toolshed bundle, made branch where Med Image toolbar has button to install from Toolshed.  Need to add capability to populate toolbar tabs.  Probably for ChimeraX 1.9
     52
    2053--------------------------
    2154= Action Items =