| | 24 | * Update ChimeraX to Python 3.11 |
| | 25 | - Zach will try compiling ChimeraX for Python 3.11 using a branch he made months ago. |
| | 26 | - Should test building on Mac ARM/Intel, Linux and Windows before making the move to 3.11. |
| | 27 | - Tinyarray, pyopengl-accelerate and tables may need to be compiled by us. |
| | 28 | |
| | 29 | * ChimeraX library |
| | 30 | - User asked on mailing list about using ChimeraX in notebook (possibly Google Colab). |
| | 31 | - Zach has initial version of library with gui code removed. |
| | 32 | - Need examples and documentation to use the library. |
| | 33 | - Might release initially just for linux built for one Python version. |
| | 34 | - CZI grant funding library ends Aug 1, 2023. Probably will ask for extension. But initial library should be released before then. |
| | 35 | |
| | 36 | * Plato update to Rocky 8 |
| | 37 | - Power outage Tuesday night 11 pm to Wed 6 am. |
| | 38 | - Plan is to switch to Rocky 8 after outage. |
| | 39 | |
| | 40 | * mmCIF out of memory errors |
| | 41 | - Got another report with user email, but no reply from any user yet. |
| | 42 | - Greg has added a sanity check when allocating size of memory mapped file. |
| | 43 | - Greg changed error message so it is distinct from system out of memory message. |
| | 44 | |
| | 45 | * Memory leak opening and closing atomic models |
| | 46 | - Eric solved biggest memory leak opening and closing atomic models. |
| | 47 | - Looking for source of next biggest leak. |
| | 48 | - Discussed flushing in-memory ligand cache in mmCIF reader so those don't accumulate when loading all PDB models. |
| | 49 | |
| | 50 | * ChimeraX builds with Github actions |
| | 51 | - Might be troublesome accessing licensed PyQt from could machine. |