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Changes between Version 562 and Version 563 of ChangeLog

v562	v563
5	5	March 12, 2026: Commands to reproduce clipping plane positions - [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/clip.html#list clip list] logs the current clipping plane positions in the form of the exact commands needed to reproduce them
6	6
7		March 5, 2026: Trajectory clustering - clustering of trajectory frames by RMSD available from the context menu of the [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/coordset.html#slider coordset slider] trajectory playback GUI, uses new [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/md.html#cluster md cluster] command
	7	March 5, 2026: Trajectory clustering - [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/md.html#cluster md cluster] command for clustering trajectory frames by RMSD; also available from the context menu of the [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/coordset.html#slider coordset slider] trajectory playback GUI
8	8
9	9	February 13, 2026: OpenFold3 structure prediction - [http://www.rbvi.ucsf.edu/chimerax/docs/user/tools/openfold.html OpenFold tool] and [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/openfold.html openfold command] to install OpenFold3 and run it to predict structures consisting of proteins, RNA, DNA, ligands and ions. Capabilities include batch prediction, server calculations, and retrieving results from the associated [http://www.rbvi.ucsf.edu/chimerax/docs/user/tools/openfold.html#history OpenFold History].

v562	v563
5	5	March 12, 2026: Commands to reproduce clipping plane positions - [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/clip.html#list clip list] logs the current clipping plane positions in the form of the exact commands needed to reproduce them
6	6
7		March 5, 2026: Trajectory clustering - clustering of trajectory frames by RMSD available from the context menu of the [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/coordset.html#slider coordset slider] trajectory playback GUI, uses new [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/md.html#cluster md cluster] command
	7	March 5, 2026: Trajectory clustering - [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/md.html#cluster md cluster] command for clustering trajectory frames by RMSD; also available from the context menu of the [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/coordset.html#slider coordset slider] trajectory playback GUI
8	8
9	9	February 13, 2026: OpenFold3 structure prediction - [http://www.rbvi.ucsf.edu/chimerax/docs/user/tools/openfold.html OpenFold tool] and [http://www.rbvi.ucsf.edu/chimerax/docs/user/commands/openfold.html openfold command] to install OpenFold3 and run it to predict structures consisting of proteins, RNA, DNA, ligands and ions. Capabilities include batch prediction, server calculations, and retrieving results from the associated [http://www.rbvi.ucsf.edu/chimerax/docs/user/tools/openfold.html#history OpenFold History].