wiki:CellPack

Version 3 (modified by Tom Goddard, 11 years ago) ( diff )

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Chimera 2 cellPACK Features

Existing cellPACK user interface is through Cinema4d, Maya, Blender, or uPy. Installation is difficult and most front-ends are expensive commercial products. Has dialogs for simple and advanced users. Very big button farm dialogs.

Russell (student intern?) has been working on a web browser front-end for viewing and creating cellPACK models.

cellPACK web site.

Viewing cellPACK models

  • Open cellPACK models, fetching JSON files from web.
  • Open collada surface files used to represent cellPACK molecules.
  • Hierarchical collapsible list of model components, checkbuttons for display
  • Clipping that hides whole molecules (instead of cutting them).
  • Animate layout of model from regular grids of component molecules.

Creating cellPACK models

  • Simple interface to run cellPACK, place molecules on a surface or within a surface.
  • Export low resolution surfaces (hundreds of triangles) for pdb models.
  • Export multi-sphere bounds file for molecular components.
  • Specify axis for molecules embedded in surface (e.g. virus spike).
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