Changes between Version 1 and Version 2 of 2023-11-16

Timestamp:

Nov 16, 2023, 12:18:12 PM (2 years ago)

Author:

Tom Goddard

Comment:

--

2023-11-16

@@ -1 +1 @@
  = Attendees =
 
-Selina, Zach, Eric, Elaine, TomG, Greg, Scooter, TomF
+Selina, Zach, Eric, Elaine, TomG, Greg, TomF
 
 November 16, 2023
@@ -12 +12 @@
 = Discussion Notes =
 
+* ChimeraX license management web page
+  - Greg working on web page for managing Chimera and ChimeraX licenses including handling revoked or expired licenses.
+
+* Kansas Phenix workshop
+  - Zach's ChimeraX cryoEM tutorial at the Phenix workshop at Kansas Univ was well received.
+  - Survey of most appreciated talks rated ChimeraX and AlphaFold talks highest.
+
+* Google AlphaFold with ligands
+  - Google DeepMind published in Nature new results predicting ligands with proteins and nucleic acids.
+  - Ligand prediction out-performed AutoDock Vina on benchmark by a large margin.
+  - Ligand is input as SMILES string, individual heavy atoms are "tokens" for neural net input.
+  - Code has not been released.  Will it be commercialized?
+
+* Elaine journal club, SlicerTMS
+  - Showed fast machine learning prediction of electric field in brain for treating depression.
+  - Software is an extension to Slicer 3D.
+  - Can be used with visualization of MRI and tractography.
+  - Can work with Slicer VR and AR.
+
+* New Mac computers
+  - Tom Ferrin ordered new iMac for Elaine and Mac Studio for Tom G.
 
 = Action Items =