Changes between Version 2 and Version 3 of 2022-3-31


Ignore:
Timestamp:
Mar 31, 2022, 2:25:17 PM (4 years ago)
Author:
Tom Goddard
Comment:

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  • 2022-3-31

    v2 v3  
    22= Attendees =
    33
    4 * Zach, Eric,  Elaine, Greg, TomG, Scooter, TomF
     4* Zach, Eric,  Elaine, Greg, TomG, Scooter
    55
    66On-site Genentech Hall N436A
     
    1515= Discussion Notes =
    1616
     17* NIAID contract
     18  - Scooter will talk to Darrell and with UCSF and MSC finance people to figure out hourly vs fixed price contract.
     19  - Everyone should look at statement of work today and make modifications for reduction from 12 month time period to 10 months.
     20
     21* Computer security
     22  - Some SPOKE developers work with PHI Wynton data so cannot use plato which prohibits PHI data users.
     23  - May setup a plato-phi wynton node that can do plato sudo SPOKE operations and be managed by wynton team meeting PHI requirements.
     24  - plato-phi should not effect any uses we make of plato
     25  - Security audit - UCSF may pay for new system administrator to implement requirements of security audit.
     26
     27* Wynton
     28  - Scooter giving presentation next week to UCSF IT governance committee on adding backups to Wynton.
     29
     30* New offices
     31  - Elaine is moving to Conrad's old office in N453.
     32  - Scooter is moving to Al's old office in N453.
     33  - Zach needs an office key.
     34
     35* CZI grant progress report by Zach
     36  - Chimera session converter
     37    * Zach made ticket of things left to do on this.
     38    * Probably development will be done by Eric and TomG (volumes).
     39  - REST
     40    * Modeller has been ported from Opal to REST and is in daily builds.
     41    * Currently working with Eric to port alignment services to REST.
     42    * Plan is to have ported alignment services in ChimeraX 1.4 release.
     43    * Opal may be shutdown when Wynton moves to CentOS 9 in 1 to 2 years because Opal will no longer run.  This will eliminate Chimera web services.
     44    * We should give Chimera users warning that web services are likely to be dropped in 1-2 years due to circumstances beyond our control.
     45  - Qt 6
     46    * 525 downloads of daily builds since March 11 with Qt 6
     47    * 7 open Qt 6 tickets, none show-stoppers
     48    * Still intend to release ChimeraX 1.4 with Qt 6
     49  - Vulkan
     50    * Reliable OpenGL on Mac M1 machines has made this unnecessary.
     51    * CZI reduced our requested funding and we told them we would drop this subproject.
     52  - ARM64 Mac port
     53    * 3 remaining packages to port: pytables, imagecodecs, netcdf4
     54    * netcdf4 may release arm64 port soon
     55    * imagecodecs and pytables available for arm64 mac on conda-forge.  Can use those.
     56    * Scooter suggests using conda-forge packages and completing this task with minimal effort.  Avoid becoming maintainers of PyPi versions of these packages.
     57  - PyPi library
     58    * Should we offer library or better non-gui ChimeraX?  Definitely library.
     59    * Discussed current python packaging methods for metadata, setup.cfg and pyproject.toml
     60    * Modernizing Toolshed packaging (bundle_info.xml) need not be connected to this project.  Would make it too hard.
     61    * TomG suggests making library in collaboration with specific developers who have requested it in the past to meet the most essential needs.
     62
    1763= Action Items =
    1864