Attendees

• Zach, Eric, Elaine, Greg, TomG, Scooter

Agenda

• CZI Essential Software grant, can we complete goals with reduced budget?
• ChimeraX 1.3 release goals, create roadmap.
• New hire job description. Has HR processed our job posting?

• Funding Update:
  • Adelson grant status report - Scooter
• SPOKE:
  • Status report - Scooter
  • Do we need to re-consider our level of involvement in this project?
    • what are the scientific benefits? - Scooter
    • what level of funding do we receive? - Scooter
    • what is the level of enthusiasm of RBVI staff? - All
    • does this project leverage our expertise? - All
• Review Action Items list below - TomG

Discussion Notes

• Network problems
  • The .27 subnet was down this morning. Lab web sites, plato unreachable.
  • Appears .27 network has unexpected dependency on N108 power.
  • Should only require Byers 101 to get .27.
  • Subnet .27 comes to N453 via N108.
  • UPS put in bypass mode while power was off. Power came back on and UPS tripped.
  • Discussion of moving "alex" machine from N108 to N453.

• Job posting
  • Have green light to post as an academic position.
  • Tom Ferrin will look through paperwork.
  • Tom Ferrin says Michelle Arkin (department chair) approval is needed.

• Phenix R24 meeting
  • First was held this morning
  • Monthly meetings will be 2nd Thursday of month 10 AM
  • Tom Ferrin suggests putting Zach in that meeting, involves REST
  • TomF, TomG (25%), Eric (25%) and Elaine (25%) listed on this grant.
  • Discussed 5 goals in statement of work, initial ones
    • REST communication
    • Phenix sends structure to show in ChimeraX
    • Place ligand in map

• CZE essential software grant awarded
  • Funding cut slightly
  • 2 years funding
  • 15% overhead
  • 6 goals
    • Chimera session converter to ChimeraX - Eric and TomG
    • Port multi-sequence alignment and homology - Zach and Eric
    • Qt 5 to 6 - TomG
    • Replace OpenGL graphics with Vulkan. Hamish could work on this if hired.
    • Distribute a native ChimeraX for Mac ARM CPUs.
    • Develop a PyPi library to distribute non-UI components of ChimeraX.
  • Scooter will say we will make best effort on Vulkan, and meet other goals.

• ChimeraX task manager
  • Will interact with REST services Zach is working on
  • Should not hold up 1.3 release

• UPS battery
  • Greg says UPS at TomG's mission bay desk beeping.
  • Tom Ferrin will get replacement battery, deliver on Monday for TomG to install

Action Items

• Tweet welcoming Zach to team, TomG.
• Have ChimeraX announce major releases (1.4, 1.5...) for ChimeraX 1.3. Greg
• Investigate paid AWS account for vr meeting server - TomG
• Create tutorial for putting model on web page - TomG
• Figure out what additional plato directories need backup - Scooter
• Set up 2-factor authentication for hal2 vpn - Scooter
• Document new vpn setup on Linux - Scooter