wiki:2018-04-19

Version 1 (modified by Conrad Huang, 8 years ago) ( diff )

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Attendees

  • Eric, TomG, Greg, Conrad, TomF

Agenda

  • mmCIF
  • Documentation and tutorial strategy
  • Chimera 1.13 release
  • Release 0.7
  • Wildcard/regex/case matching in commands
  • What to show in log when opening model? Citation? Title? ticket #1030

Discussion

  • mmCIF
    • Fix reading so that non-standard monomer connectivity is handled properly
    • Fix writing to generate non-standard flags correctly
  • Documentation and tutorial strategy
    • Allow users to add subcommands to existing commands
    • Must list all commands and subcommands in bundle_info.xml
    • List URI for each commands/subcommands
    • Above are suggestions, more discussion needed, particularly with Elaine
  • Chimera 1.13 release
    • OpenSSL
      • pip is standard now
      • need to remove MacOS/python2.7, use Resources/bin/python instead
    • Additional tools menu now being tested -- couple more days
    • Very close to including new rotamer library too
    • Conrad will add code to limit ligand size to 100 heavy atoms for Vina
    • Goal: have a release candidate up by the end of next week

Action Items

  • Conrad will look into making toolshed add selector descriptions from bundle_info.xml
  • Eric will update Chimera programmer FAQ for pip
  • Conrad will switch to using new openssl for Chimera 1.13 release
  • Eric will update/close-and-open-new ticket #978
  • Greg will create a "flat pack" example and demo it at April 26 CDM
  • Greg will finish writing technical documentation for mmCIF output
  • TEF will check on status of rotamer library license
  • Conrad will edit bundle code tutorial
  • Conrad will continue working on ribbon tickets
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