Changes between Version 21 and Version 22 of 2018-01-25

Timestamp:

Feb 7, 2018, 2:04:55 PM (8 years ago)

Author:

Eric Pettersen

Comment:

--

2018-01-25

@@ -37 +37 @@
      - returning numpy '''1.48s'''
      - returning tuple '''0.103s'''
+   - Cythonize Atom methods? function: '''0.074s'''; method: '''0.204s'''; prop: '''0.135s'''
+   - Cythonize hydrogen bond code?  How hard is this?
    - Cythonize '''Atom''' (2ajq; 14791 atoms; ''contacts'': chain A against others)
     - addh '''1.1x faster''' (22.21s -> 20.14s)
@@ -51 +53 @@
    - Above plus trivial Cythonization of module
     - contacts '''2.7x faster''' (0.444s -> 0.164s)
-   - Cythonize Atom methods? function: '''0.074s'''; method: '''0.204s'''; prop: '''0.135s'''
-   - Cythonize hydrogen bond code?  How hard is this?
   - Approach
    - Cythonize major objects (ctypes)