Changes between Version 18 and Version 19 of 2018-01-25

Timestamp:

Feb 7, 2018, 11:22:43 AM (8 years ago)

Author:

Eric Pettersen

Comment:

--

2018-01-25

@@ -37 +37 @@
      - returning numpy '''1.48s'''
      - returning tuple '''0.103s'''
-   - Cythonize '''Atom'''
+   - Cythonize '''Atom''' (2ajq; 14791 atoms; ''contacts'': chain A against others)
     - addh '''9.3% faster''' (22.21s -> 20.14s)
     - hbonds '''3.3% faster''' (3.44s -> 3.30s)
     - contacts '''25.0% faster''' (0.444s -> 0.333s)
-      - chain A against others
    - Cythonize '''Atom''' + '''Element'''
     - addh '''29.3% faster''' (22.21s -> 15.71s) [C1: 8.68s]
     - hbonds '''18.3% faster''' (3.44s -> 2.81s) [C1: 3.04s]
     - contacts '''43.0% faster''' (0.444s -> 0.253s) [C1: 0.216s]
-      - chain A against others
    - Cythonize Atom methods? function: '''0.074s'''; method: '''0.204s'''; prop: '''0.135s'''
    - Cythonize hydrogen bond code?  How hard is this?