Changes between Version 1 and Version 2 of 2017-08-17
- Timestamp:
- Aug 17, 2017, 2:29:20 PM (8 years ago)
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2017-08-17
v1 v2 5 5 = Agenda = 6 6 * Review action items from 8/10 meeting 7 * ChimeraX paper8 7 * Yet another new bundle building change 9 8 * Sessions: msgpack vs pickle 10 * Chimera 1 fetching vs SSL certificate on Windows11 9 * ChimeraX alpha 2 release? 12 * Log vs session in ChimeraX13 10 * Rotamer library license 11 * Chimera 1.12 12 * Preferences GUI 13 * Alpha 4 14 * Undo manager 14 15 * Next meeting 15 - Chimera 1.12 release?16 - Preserve logs in sessions as history? 16 17 - Who will develop mmCIF writer? [https://plato.cgl.ucsf.edu/trac/ChimeraX/ticket/752#comment:3 ticket] 17 18 - ChimeraX on Github … … 19 20 = Discussion = 20 21 * ChimeraX paper 21 - Cannot run Adobe Acrobat in a browser, waiting on Wiley 22 - Ignore latest email message 22 - Sent a PDF with changes, which was acknowledged 23 23 * Yet another new bundle building change 24 - Works for daily build24 - Using API version attr instead of testing for exceptions 25 25 - Enhance bundle API to pass bundle/command info to '''register_command''' and '''start_tool''' 26 - Bump version to 0.227 - Use try/except to handle 0.1 bundles in 0.228 26 * Sessions: msgpack vs pickle 29 - Need to distinguish between tuples and lists when restoring30 - Development version of msgpack supports better type extensions31 - New msgpack session code handles tuples/lists but is ~10% slower than before32 27 - Use different extension mechanism to handle tuples/lists instead of overloading map serialization and checking for special {{{ __type__ }}} key 33 28 - Other custom types, e.g., DateTime, will use new extension mechanism as well 34 * ChimeraX alpha 2 release? 35 - All will test sessions as much as possible. 36 - ~~Eric will update splash screen image. 37 - Conrad will generate session "release notes" limitations. 38 - Check back on Monday. 39 - Tom will make a list of major features added since alpha 1. 40 - Eric will look into Elaine's core dump. 41 - Need to run {{{ debug test }}}. 42 * Log vs session 43 - Preserve logs as history but not displayed when session is opened 29 * ChimeraX alpha 2 release 30 - announcements 44 31 * Rotamer library license 45 - "We will not divulge source to rotamer library"46 - We distribute a binary encoded file for part of the source data47 32 - Revise license to say "Chimera and ChimeraX" instead of just "Chimera" 48 33 … … 52 37 - e.g., to specify polymer in atomspec 53 38 * Scooter will investigate making tickets public (possibly marking some tickets private) 39 * Elaine Alpha 2 announcements