wiki:2015-4-6

Version 1 (modified by Tom Goddard, 11 years ago) ( diff )

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Attendees

Elaine, Eric, Greg, Scooter, TomG, Graham, Conrad

Agenda

  • Chimera 2 functionality for initial release
  • Blobs or no?

Discussion

  • Discussed what user functionality to put in first Chimera 2 release
  • Chose from list of functions to emphasize "presentation images" and cellPACK/multiscale.
  • Eric discussed problems using atom indices in blobs.
  • Decided bonds could be returned at two atom blobs instead of pairs of atom indices.
  • Discussed whether we will have Python atom objects, also bonds, residues, chains.... Yes.
  • Conrad discussed using atom blobs in "collections" (= "selections" in Chimera 1 terminology)
  • Discussed how to register new object types that go into collections to be used by atom spec code.

Action Items

  • Elaine and Conrad will propose ideal presentation image features and UI for initial release.
  • Graham and Tom G will propose ideal cellPACK/multiscale features and UI for initial release.
  • Conrad will make APIs to register object types for atom spec parsing
  • Eric will have atom blob bonds return two atom blobs of paired atoms instead of atom indices.
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