Changes between Initial Version and Version 1 of Ticket #9224


Ignore:
Timestamp:
Jun 21, 2023, 11:03:54 AM (2 years ago)
Author:
Eric Pettersen
Comment:

Reported by Sudipa Rijal

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #9224

    • Property Component Unassigned → Volume Data
    • Property Owner set to Tom Goddard
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → Crash showing vseries

  • Ticket #9224 – Description

    initial v1  
    66Last time you used ChimeraX it crashed
    77During Vseries display
     8===== Log before crash start =====
     9UCSF ChimeraX version: 1.3 (2021-12-08) 
     10© 2016-2021 Regents of the University of California. All rights reserved. 
     11How to cite UCSF ChimeraX 
     12
     13> toolshed show
     14
     15> ui tool show "Volume Viewer"
     16
     17> open "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     18> datasets in cryosparc/3D variability
     19> display/cryosparc_P39_J499_component_000/J499_component_000_frame_000.mrc"
     20> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     21> in cryosparc/3D variability
     22> display/cryosparc_P39_J499_component_000/J499_component_000_frame_001.mrc"
     23> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     24> in cryosparc/3D variability
     25> display/cryosparc_P39_J499_component_000/J499_component_000_frame_002.mrc"
     26> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     27> in cryosparc/3D variability
     28> display/cryosparc_P39_J499_component_000/J499_component_000_frame_003.mrc"
     29> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     30> in cryosparc/3D variability
     31> display/cryosparc_P39_J499_component_000/J499_component_000_frame_004.mrc"
     32> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     33> in cryosparc/3D variability
     34> display/cryosparc_P39_J499_component_000/J499_component_000_frame_005.mrc"
     35> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     36> in cryosparc/3D variability
     37> display/cryosparc_P39_J499_component_000/J499_component_000_frame_006.mrc"
     38> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     39> in cryosparc/3D variability
     40> display/cryosparc_P39_J499_component_000/J499_component_000_frame_007.mrc"
     41> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     42> in cryosparc/3D variability
     43> display/cryosparc_P39_J499_component_000/J499_component_000_frame_008.mrc"
     44> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     45> in cryosparc/3D variability
     46> display/cryosparc_P39_J499_component_000/J499_component_000_frame_009.mrc"
     47> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     48> in cryosparc/3D variability
     49> display/cryosparc_P39_J499_component_000/J499_component_000_frame_010.mrc"
     50> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     51> in cryosparc/3D variability
     52> display/cryosparc_P39_J499_component_000/J499_component_000_frame_011.mrc"
     53> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     54> in cryosparc/3D variability
     55> display/cryosparc_P39_J499_component_000/J499_component_000_frame_012.mrc"
     56> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     57> in cryosparc/3D variability
     58> display/cryosparc_P39_J499_component_000/J499_component_000_frame_013.mrc"
     59> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     60> in cryosparc/3D variability
     61> display/cryosparc_P39_J499_component_000/J499_component_000_frame_014.mrc"
     62> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     63> in cryosparc/3D variability
     64> display/cryosparc_P39_J499_component_000/J499_component_000_frame_015.mrc"
     65> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     66> in cryosparc/3D variability
     67> display/cryosparc_P39_J499_component_000/J499_component_000_frame_016.mrc"
     68> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     69> in cryosparc/3D variability
     70> display/cryosparc_P39_J499_component_000/J499_component_000_frame_017.mrc"
     71> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     72> in cryosparc/3D variability
     73> display/cryosparc_P39_J499_component_000/J499_component_000_frame_018.mrc"
     74> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     75> in cryosparc/3D variability
     76> display/cryosparc_P39_J499_component_000/J499_component_000_frame_019.mrc"
     77
     78Opened J499_component_000_frame_000.mrc as #1.1, grid size 400,400,400, pixel
     790.813, shown at level 0.0193, step 2, values float32 
     80Opened J499_component_000_frame_001.mrc as #1.2, grid size 400,400,400, pixel
     810.813, shown at level 0.0193, step 2, values float32 
     82Opened J499_component_000_frame_002.mrc as #1.3, grid size 400,400,400, pixel
     830.813, shown at level 0.0193, step 2, values float32 
     84Opened J499_component_000_frame_003.mrc as #1.4, grid size 400,400,400, pixel
     850.813, shown at level 0.0193, step 2, values float32 
     86Opened J499_component_000_frame_004.mrc as #1.5, grid size 400,400,400, pixel
     870.813, shown at level 0.0194, step 2, values float32 
     88Opened J499_component_000_frame_005.mrc as #1.6, grid size 400,400,400, pixel
     890.813, shown at level 0.0194, step 2, values float32 
     90Opened J499_component_000_frame_006.mrc as #1.7, grid size 400,400,400, pixel
     910.813, shown at level 0.0194, step 2, values float32 
     92Opened J499_component_000_frame_007.mrc as #1.8, grid size 400,400,400, pixel
     930.813, shown at level 0.0195, step 2, values float32 
     94Opened J499_component_000_frame_008.mrc as #1.9, grid size 400,400,400, pixel
     950.813, shown at level 0.0196, step 2, values float32 
     96Opened J499_component_000_frame_009.mrc as #1.10, grid size 400,400,400, pixel
     970.813, shown at level 0.0197, step 2, values float32 
     98Opened J499_component_000_frame_010.mrc as #1.11, grid size 400,400,400, pixel
     990.813, shown at level 0.0197, step 2, values float32 
     100Opened J499_component_000_frame_011.mrc as #1.12, grid size 400,400,400, pixel
     1010.813, shown at level 0.0197, step 2, values float32 
     102Opened J499_component_000_frame_012.mrc as #1.13, grid size 400,400,400, pixel
     1030.813, shown at level 0.0198, step 2, values float32 
     104Opened J499_component_000_frame_013.mrc as #1.14, grid size 400,400,400, pixel
     1050.813, shown at level 0.0198, step 2, values float32 
     106Opened J499_component_000_frame_014.mrc as #1.15, grid size 400,400,400, pixel
     1070.813, shown at level 0.0198, step 2, values float32 
     108Opened J499_component_000_frame_015.mrc as #1.16, grid size 400,400,400, pixel
     1090.813, shown at level 0.0198, step 2, values float32 
     110Opened J499_component_000_frame_016.mrc as #1.17, grid size 400,400,400, pixel
     1110.813, shown at level 0.0199, step 2, values float32 
     112Opened J499_component_000_frame_017.mrc as #1.18, grid size 400,400,400, pixel
     1130.813, shown at level 0.0199, step 2, values float32 
     114Opened J499_component_000_frame_018.mrc as #1.19, grid size 400,400,400, pixel
     1150.813, shown at level 0.02, step 2, values float32 
     116Opened J499_component_000_frame_019.mrc as #1.20, grid size 400,400,400, pixel
     1170.813, shown at level 0.02, step 2, values float32 
     118
     119>
     120
     121Incomplete command: vseries 
     122
     123> play
     124
     125Unknown command: play 
     126
     127> select #1
     128
     12941 models selected 
     130
     131> play
     132
     133Unknown command: play 
     134
     135> ui tool show "Show Volume Menu"
     136
     137> volume #1.12 color red
     138
     139>
     140
     141Incomplete command: vseries 
     142
     143> view
     144
     145> view orient
     146
     147> lighting shadows true
     148
     149> lighting shadows false
     150
     151> graphics silhouettes true
     152
     153> graphics silhouettes false
     154
     155> lighting soft
     156
     157> lighting full
     158
     159> lighting soft
     160
     161> lighting full
     162
     163> lighting simple
     164
     165> ui tool show Toolbar
     166
     167> oscillate
     168
     169Unknown command: oscillate 
     170
     171> oscillate 1.1 1.2 1.3
     172
     173Unknown command: oscillate 1.1 1.2 1.3 
     174
     175> help help:user/tools/modelpanel.html
     176
     177> volume all hide
     178
     179> movie record
     180
     181> vop morph #0 playStep 0.05 frames 20
     182
     183volume morph requires 2 or more volumes, got 0 
     184
     185> show #!1.1 models
     186
     187> hide #!1.1 models
     188
     189> show #!1.1 models
     190
     191> show #!1.2 models
     192
     193> hide #!1.2 models
     194
     195> show #!1.2 models
     196
     197> hide #!1.2 models
     198
     199> show #!1.2 models
     200
     201> hide #!1.2 models
     202
     203> show #!1.2 models
     204
     205> hide #!1.1 models
     206
     207> show #!1.1 models
     208
     209> show #!1.3 models
     210
     211> hide #!1.3 models
     212
     213> hide #!1.1 models
     214
     215> hide #!1.2 models
     216
     217> show #!1.1 models
     218
     219> show #!1.2 models
     220
     221> show #!1.3 models
     222
     223> show #!1.4 models
     224
     225> show #!1.5 models
     226
     227> show #!1.7 models
     228
     229> show #!1.6 models
     230
     231> show #!1.8 models
     232
     233> show #!1.9 models
     234
     235> show #!1.10 models
     236
     237> show #!1.11 models
     238
     239> show #!1.12 models
     240
     241> show #!1.13 models
     242
     243> show #!1.14 models
     244
     245> show #!1.15 models
     246
     247> show #!1.16 models
     248
     249> show #!1.17 models
     250
     251> show #!1.18 models
     252
     253> show #!1.19 models
     254
     255> show #!1.20 models
     256
     257> ui tool show "Volume Viewer"
     258
     259> open "Y:\sudipag\Sudipa\Projects\2023\CRBN-DDB1-HPK1\Reanalysis of older
     260> datasets in cryosparc\Maps for Chimera\cryosparc_P39_J458_component_0.mrc"
     261> format mrc
     262
     263Opened cryosparc_P39_J458_component_0.mrc as #2, grid size 400,400,400, pixel
     2640.813, shown at level 8.17e-05, step 2, values float32 
     265
     266> hide #!1 models
     267
     268> show #!1 models
     269
     270> hide #!1 models
     271
     272> show #!1 models
     273
     274> color #2 #ffff7f models transparency 0
     275
     276> open "Y:\sudipag\Sudipa\Projects\2023\CRBN-DDB1-HPK1\Reanalysis of older
     277> datasets in cryosparc\Maps for Chimera\cryosparc_P39_J458_component_1.mrc"
     278> format mrc
     279
     280Opened cryosparc_P39_J458_component_1.mrc as #3, grid size 400,400,400, pixel
     2810.813, shown at level 0.000156, step 2, values float32 
     282
     283> open "Y:\sudipag\Sudipa\Projects\2023\CRBN-DDB1-HPK1\Reanalysis of older
     284> datasets in cryosparc\Maps for Chimera\cryosparc_P39_J458_component_2.mrc"
     285> format mrc
     286
     287Opened cryosparc_P39_J458_component_2.mrc as #4, grid size 400,400,400, pixel
     2880.813, shown at level 0.00013, step 2, values float32 
     289
     290> color #3 #ffaaff models transparency 0
     291
     292> hide #!1 models
     293
     294> select #2
     295
     2962 models selected 
     297
     298> ui mousemode right "translate selected models"
     299
     300> view matrix models #2,1,0,0,68.857,0,1,0,161.2,0,0,1,40.64
     301
     302> view matrix models #2,1,0,0,69.163,0,1,0,161.89,0,0,1,37.047
     303
     304> ~select #2
     305
     306Nothing selected 
     307
     308> select #4
     309
     3102 models selected 
     311
     312> select #2
     313
     3142 models selected 
     315
     316> view matrix models #2,1,0,0,-63.079,0,1,0,-147.63,0,0,1,-30.501
     317
     318> ~select #2
     319
     320Nothing selected 
     321
     322> ~select #4
     323
     324Nothing selected 
     325
     326> select #4
     327
     3282 models selected 
     329
     330> view matrix models #4,1,0,0,59.359,0,1,0,138.94,0,0,1,30.857
     331
     332> set bgColor white
     333
     334> volume #1.1 step 1
     335
     336> volume #1.2 step 1
     337
     338> volume #2 step 1
     339
     340> volume #3 step 1
     341
     342> volume #4 step 1
     343
     344> volume #2 level 0.00013
     345
     346> volume #3 level 0.00013
     347
     348> ~select #4
     349
     350Nothing selected 
     351
     352> hide #!2 models
     353
     354> hide #2.1 models
     355
     356> hide #!3 models
     357
     358> hide #!4 models
     359
     360> show #!1 models
     361
     362> hide #!1 models
     363
     364> show #!1 models
     365
     366> vseries play #1 loop true
     367
     368No volume series specified 
     369
     370> select #1
     371
     37241 models selected 
     373
     374> vseries play #1 loop true
     375
     376No volume series specified 
     377
     378> vseries play #1 loop true
     379
     380No volume series specified 
     381
     382> ~select #1
     383
     384Nothing selected 
     385
     386> ~select #1.1
     387
     388Nothing selected 
     389
     390> ~select #1.2
     391
     392Nothing selected 
     393
     394> ~select #1.3
     395
     396Nothing selected 
     397
     398> ~select #1.4
     399
     400Nothing selected 
     401
     402> ~select #1.5
     403
     404Nothing selected 
     405
     406> ~select #1.6
     407
     408Nothing selected 
     409
     410> ~select #1.7
     411
     412Nothing selected 
     413
     414> ~select #1.8
     415
     416Nothing selected 
     417
     418> ~select #1.9
     419
     420Nothing selected 
     421
     422> ~select #1.10
     423
     424Nothing selected 
     425
     426> ~select #1.11
     427
     428Nothing selected 
     429
     430> ~select #1.12
     431
     432Nothing selected 
     433
     434> ~select #1.13
     435
     436Nothing selected 
     437
     438> ~select #1.14
     439
     440Nothing selected 
     441
     442> ~select #1.15
     443
     444Nothing selected 
     445
     446> ~select #1.16
     447
     448Nothing selected 
     449
     450> ~select #1.17
     451
     452Nothing selected 
     453
     454> ~select #1.18
     455
     456Nothing selected 
     457
     458> ~select #1.19
     459
     460Nothing selected 
     461
     462> ~select #1.20
     463
     464Nothing selected 
     465
     466> hide #!1.1 models
     467
     468> show #!1.1 models
     469
     470> hide #!1.20 models
     471
     472> hide #!1.19 models
     473
     474> hide #!1.18 models
     475
     476> hide #!1.17 models
     477
     478> hide #!1.16 models
     479
     480> hide #!1.15 models
     481
     482> hide #!1.14 models
     483
     484> hide #!1.13 models
     485
     486> hide #!1.12 models
     487
     488> hide #!1.11 models
     489
     490> hide #!1.10 models
     491
     492> hide #!1.9 models
     493
     494> hide #!1.8 models
     495
     496> hide #!1.7 models
     497
     498> hide #!1.6 models
     499
     500> hide #!1.5 models
     501
     502> hide #!1.4 models
     503
     504> hide #!1.3 models
     505
     506> hide #!1.2 models
     507
     508> hide #!1.1 models
     509
     510> show #!1.1 models
     511
     512> show #!1.4 models
     513
     514> show #!1.5 models
     515
     516> hide #!1.5 models
     517
     518> show #!1.7 models
     519
     520> vseries play #1.1 1.4 1.7 loop true
     521
     522Expected a keyword 
     523
     524> vseries play #1 loop 1.1 1.4 1.7
     525
     526Invalid "loop" argument: Expected true or false (or 1 or 0) 
     527
     528> vseries play #1 loop true
     529
     530No volume series specified 
     531
     532> show #!1.2 models
     533
     534> show #!1.3 models
     535
     536> show #!1.5 models
     537
     538> show #!1.6 models
     539
     540> show #!1.8 models
     541
     542> show #!1.9 models
     543
     544> show #!1.11 models
     545
     546> show #!1.10 models
     547
     548> show #!1.12 models
     549
     550> show #!1.13 models
     551
     552> show #!1.14 models
     553
     554> show #!1.15 models
     555
     556> show #!1.16 models
     557
     558> show #!1.17 models
     559
     560> show #!1.18 models
     561
     562> show #!1.19 models
     563
     564> show #!1.20 models
     565
     566> vseries play #1 loop true
     567
     568No volume series specified 
     569
     570> hide #!1 models
     571
     572> hide #!1.1 models
     573
     574> show #!1 models
     575
     576> hide #!1 models
     577
     578> show #!2 models
     579
     580> show #!3 models
     581
     582> show #!4 models
     583
     584> hide #!2 models
     585
     586> show #!2 models
     587
     588> select #2
     589
     5902 models selected 
     591
     592> show #!1.1 models
     593
     594> hide #!1 models
     595
     596> color #2 #ffaa00 models transparency 0
     597
     598> ~select #2
     599
     600Nothing selected 
     601
     602> color #2 yellow models transparency 0
     603
     604> show #!2 target m
     605
     606> select #2
     607
     6082 models selected 
     609
     610> show #!2 target m
     611
     612> ~select #2
     613
     614Nothing selected 
     615
     616> select #2
     617
     6182 models selected 
     619
     620> ~select #2
     621
     622Nothing selected 
     623
     624> hide #!3 models
     625
     626> show #!3 models
     627
     628Traceback (most recent call last): 
     629File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     630packages\chimerax\core\triggerset.py", line 134, in invoke 
     631return self._func(self._name, data) 
     632File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     633packages\chimerax\movie\movie.py", line 172, in capture_image 
     634i.save(save_path, self.img_fmt) 
     635File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\PIL\Image.py", line
     6362235, in save 
     637save_handler(self, fp, filename) 
     638File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     639packages\PIL\PpmImagePlugin.py", line 149, in _save 
     640ImageFile._save(im, fp, [("raw", (0, 0) + im.size, 0, (rawmode, 0, 1))]) 
     641File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\PIL\ImageFile.py",
     642line 536, in _save 
     643s = e.encode_to_file(fh, bufsize) 
     644OSError: [Errno 28] No space left on device 
     645 
     646Error processing trigger "frame drawn": 
     647OSError: [Errno 28] No space left on device 
     648 
     649File "C:\Program Files\ChimeraX 1.3\bin\lib\site-packages\PIL\ImageFile.py",
     650line 536, in _save 
     651s = e.encode_to_file(fh, bufsize) 
     652 
     653See log for complete Python traceback. 
     654 
     655
     656> show #!2 target m
     657
     658> hide #!3 models
     659
     660> hide #!4 models
     661
     662> hide #!2 models
     663
     664> show #!1 models
     665
     666> show #!3 models
     667
     668Traceback (most recent call last): 
     669File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     670packages\chimerax\core\history.py", line 109, in save 
     671json.dump(obj, f, ensure_ascii=False) 
     672File "C:\Program Files\ChimeraX 1.3\bin\lib\json\\__init__.py", line 180, in
     673dump 
     674fp.write(chunk) 
     675OSError: [Errno 28] No space left on device 
     676 
     677During handling of the above exception, another exception occurred: 
     678 
     679OSError: [Errno 28] No space left on device 
     680 
     681During handling of the above exception, another exception occurred: 
     682 
     683Traceback (most recent call last): 
     684File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     685packages\chimerax\core\triggerset.py", line 134, in invoke 
     686return self._func(self._name, data) 
     687File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     688packages\chimerax\cmd_line\tool.py", line 325, in _command_started_cb 
     689self.history_dialog.add(self._just_typed_command or cmd_text, 
     690File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     691packages\chimerax\cmd_line\tool.py", line 423, in add 
     692self._history.enqueue((item, typed)) 
     693File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     694packages\chimerax\core\history.py", line 171, in enqueue 
     695self.save() 
     696File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     697packages\chimerax\core\history.py", line 201, in save 
     698self._history.save(self._queue) 
     699File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     700packages\chimerax\core\history.py", line 109, in save 
     701json.dump(obj, f, ensure_ascii=False) 
     702File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     703packages\chimerax\core\safesave.py", line 85, in __exit__ 
     704self._f.close() 
     705OSError: [Errno 28] No space left on device 
     706 
     707Error processing trigger "command started": 
     708OSError: [Errno 28] No space left on device 
     709 
     710File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     711packages\chimerax\core\safesave.py", line 85, in __exit__ 
     712self._f.close() 
     713 
     714See log for complete Python traceback. 
     715 
     716
     717> hide #!3 models
     718
     719Traceback (most recent call last): 
     720File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     721packages\chimerax\core\history.py", line 109, in save 
     722json.dump(obj, f, ensure_ascii=False) 
     723File "C:\Program Files\ChimeraX 1.3\bin\lib\json\\__init__.py", line 180, in
     724dump 
     725fp.write(chunk) 
     726OSError: [Errno 28] No space left on device 
     727 
     728During handling of the above exception, another exception occurred: 
     729 
     730OSError: [Errno 28] No space left on device 
     731 
     732During handling of the above exception, another exception occurred: 
     733 
     734Traceback (most recent call last): 
     735File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     736packages\chimerax\core\triggerset.py", line 134, in invoke 
     737return self._func(self._name, data) 
     738File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     739packages\chimerax\cmd_line\tool.py", line 325, in _command_started_cb 
     740self.history_dialog.add(self._just_typed_command or cmd_text, 
     741File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     742packages\chimerax\cmd_line\tool.py", line 423, in add 
     743self._history.enqueue((item, typed)) 
     744File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     745packages\chimerax\core\history.py", line 171, in enqueue 
     746self.save() 
     747File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     748packages\chimerax\core\history.py", line 201, in save 
     749self._history.save(self._queue) 
     750File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     751packages\chimerax\core\history.py", line 109, in save 
     752json.dump(obj, f, ensure_ascii=False) 
     753File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     754packages\chimerax\core\safesave.py", line 85, in __exit__ 
     755self._f.close() 
     756OSError: [Errno 28] No space left on device 
     757 
     758Error processing trigger "command started": 
     759OSError: [Errno 28] No space left on device 
     760 
     761File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     762packages\chimerax\core\safesave.py", line 85, in __exit__ 
     763self._f.close() 
     764 
     765See log for complete Python traceback. 
     766 
     767
     768> open vseries true
     769
     770'vseries' has no suffix 
     771
     772> open vseries #1 true
     773
     774'vseries' has no suffix 
     775
     776> open vseries #1 true
     777
     778'vseries' has no suffix 
     779
     780> open "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     781> datasets in cryosparc/3D variability
     782> display/cryosparc_P39_J499_component_000/J499_component_000_frame_000.mrc"
     783> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     784> in cryosparc/3D variability
     785> display/cryosparc_P39_J499_component_000/J499_component_000_frame_001.mrc"
     786> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     787> in cryosparc/3D variability
     788> display/cryosparc_P39_J499_component_000/J499_component_000_frame_002.mrc"
     789> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     790> in cryosparc/3D variability
     791> display/cryosparc_P39_J499_component_000/J499_component_000_frame_003.mrc"
     792> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     793> in cryosparc/3D variability
     794> display/cryosparc_P39_J499_component_000/J499_component_000_frame_004.mrc"
     795> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     796> in cryosparc/3D variability
     797> display/cryosparc_P39_J499_component_000/J499_component_000_frame_005.mrc"
     798> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     799> in cryosparc/3D variability
     800> display/cryosparc_P39_J499_component_000/J499_component_000_frame_006.mrc"
     801> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     802> in cryosparc/3D variability
     803> display/cryosparc_P39_J499_component_000/J499_component_000_frame_007.mrc"
     804> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     805> in cryosparc/3D variability
     806> display/cryosparc_P39_J499_component_000/J499_component_000_frame_008.mrc"
     807> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     808> in cryosparc/3D variability
     809> display/cryosparc_P39_J499_component_000/J499_component_000_frame_009.mrc"
     810> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     811> in cryosparc/3D variability
     812> display/cryosparc_P39_J499_component_000/J499_component_000_frame_010.mrc"
     813> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     814> in cryosparc/3D variability
     815> display/cryosparc_P39_J499_component_000/J499_component_000_frame_011.mrc"
     816> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     817> in cryosparc/3D variability
     818> display/cryosparc_P39_J499_component_000/J499_component_000_frame_012.mrc"
     819> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     820> in cryosparc/3D variability
     821> display/cryosparc_P39_J499_component_000/J499_component_000_frame_013.mrc"
     822> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     823> in cryosparc/3D variability
     824> display/cryosparc_P39_J499_component_000/J499_component_000_frame_014.mrc"
     825> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     826> in cryosparc/3D variability
     827> display/cryosparc_P39_J499_component_000/J499_component_000_frame_015.mrc"
     828> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     829> in cryosparc/3D variability
     830> display/cryosparc_P39_J499_component_000/J499_component_000_frame_016.mrc"
     831> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     832> in cryosparc/3D variability
     833> display/cryosparc_P39_J499_component_000/J499_component_000_frame_017.mrc"
     834> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     835> in cryosparc/3D variability
     836> display/cryosparc_P39_J499_component_000/J499_component_000_frame_018.mrc"
     837> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     838> in cryosparc/3D variability
     839> display/cryosparc_P39_J499_component_000/J499_component_000_frame_019.mrc"
     840> vseries true
     841
     842Opened map series J499_component_000_frame_000.mrc as #5, 20 images, grid size
     843400,400,400, pixel 0.813, shown at level 0.0193, step 2, values float32 
     844
     845> close #1
     846
     847> play#5 loop true
     848
     849Unknown command: vseries play#5 loop true 
     850
     851> show #5.2 models
     852
     853> show #5.3 models
     854
     855> hide #5.3 models
     856
     857> show #5.3 models
     858
     859> hide #!5.3 models
     860
     861> show #!5.3 models
     862
     863> show #5.4 models
     864
     865> hide #!5.4 models
     866
     867> show #!5.4 models
     868
     869> show #5.5 models
     870
     871> show #5.6 models
     872
     873> show #5.7 models
     874
     875> hide #!5.7 models
     876
     877> show #!5.7 models
     878
     879> show #5.8 models
     880
     881> show #5.9 models
     882
     883> show #5.10 models
     884
     885> show #5.11 models
     886
     887> show #5.12 models
     888
     889> show #5.13 models
     890
     891> show #5.14 models
     892
     893> show #5.15 models
     894
     895> show #5.16 models
     896
     897> show #5.18 models
     898
     899> show #5.17 models
     900
     901> show #5.19 models
     902
     903> show #5.20 models
     904
     905> play#5 loop true
     906
     907Unknown command: vseries play#5 loop true 
     908
     909> open "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     910> datasets in cryosparc/3D variability
     911> display/cryosparc_P39_J499_component_001/J499_component_001_frame_000.mrc"
     912> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     913> in cryosparc/3D variability
     914> display/cryosparc_P39_J499_component_001/J499_component_001_frame_001.mrc"
     915> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     916> in cryosparc/3D variability
     917> display/cryosparc_P39_J499_component_001/J499_component_001_frame_002.mrc"
     918> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     919> in cryosparc/3D variability
     920> display/cryosparc_P39_J499_component_001/J499_component_001_frame_003.mrc"
     921> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     922> in cryosparc/3D variability
     923> display/cryosparc_P39_J499_component_001/J499_component_001_frame_004.mrc"
     924> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     925> in cryosparc/3D variability
     926> display/cryosparc_P39_J499_component_001/J499_component_001_frame_005.mrc"
     927> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     928> in cryosparc/3D variability
     929> display/cryosparc_P39_J499_component_001/J499_component_001_frame_006.mrc"
     930> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     931> in cryosparc/3D variability
     932> display/cryosparc_P39_J499_component_001/J499_component_001_frame_007.mrc"
     933> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     934> in cryosparc/3D variability
     935> display/cryosparc_P39_J499_component_001/J499_component_001_frame_008.mrc"
     936> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     937> in cryosparc/3D variability
     938> display/cryosparc_P39_J499_component_001/J499_component_001_frame_009.mrc"
     939> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     940> in cryosparc/3D variability
     941> display/cryosparc_P39_J499_component_001/J499_component_001_frame_010.mrc"
     942> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     943> in cryosparc/3D variability
     944> display/cryosparc_P39_J499_component_001/J499_component_001_frame_011.mrc"
     945> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     946> in cryosparc/3D variability
     947> display/cryosparc_P39_J499_component_001/J499_component_001_frame_012.mrc"
     948> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     949> in cryosparc/3D variability
     950> display/cryosparc_P39_J499_component_001/J499_component_001_frame_013.mrc"
     951> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     952> in cryosparc/3D variability
     953> display/cryosparc_P39_J499_component_001/J499_component_001_frame_014.mrc"
     954> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     955> in cryosparc/3D variability
     956> display/cryosparc_P39_J499_component_001/J499_component_001_frame_015.mrc"
     957> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     958> in cryosparc/3D variability
     959> display/cryosparc_P39_J499_component_001/J499_component_001_frame_016.mrc"
     960> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     961> in cryosparc/3D variability
     962> display/cryosparc_P39_J499_component_001/J499_component_001_frame_017.mrc"
     963> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     964> in cryosparc/3D variability
     965> display/cryosparc_P39_J499_component_001/J499_component_001_frame_018.mrc"
     966> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     967> in cryosparc/3D variability
     968> display/cryosparc_P39_J499_component_001/J499_component_001_frame_019.mrc"
     969> vseries true
     970
     971Opened map series J499_component_001_frame_000.mrc as #1, 20 images, grid size
     972400,400,400, pixel 0.813, shown at level 0.0179, step 2, values float32 
     973
     974> play#1 loop true
     975
     976Unknown command: vseries play#1 loop true 
     977
     978> hide #!1 models
     979
     980> show #!1 models
     981
     982> hide #!1 models
     983
     984> show #!1 models
     985
     986> hide #!1 models
     987
     988> hide #!5 models
     989
     990> show #!1 models
     991
     992> volume #5.1 level 0.03689
     993
     994> play#1 loop true
     995
     996Unknown command: vseries play#1 loop true 
     997
     998> play#1 loop
     999
     1000Unknown command: vseries play#1 loop 
     1001
     1002> play#5 loop
     1003
     1004Unknown command: vseries play#5 loop 
     1005
     1006> show #!5 models
     1007
     1008> hide #!5 models
     1009
     1010> show #!5 models
     1011
     1012> hide #!5 models
     1013
     1014> hide #!1 models
     1015
     1016> show #!5 models
     1017
     1018> play#5 loop
     1019
     1020Unknown command: vseries play#5 loop 
     1021
     1022> hide #!5 models
     1023
     1024> show #!1 models
     1025
     1026> open "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     1027> datasets in cryosparc/3D variability
     1028> display/cryosparc_P39_J499_component_002/J499_component_002_frame_000.mrc"
     1029> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1030> in cryosparc/3D variability
     1031> display/cryosparc_P39_J499_component_002/J499_component_002_frame_001.mrc"
     1032> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1033> in cryosparc/3D variability
     1034> display/cryosparc_P39_J499_component_002/J499_component_002_frame_002.mrc"
     1035> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1036> in cryosparc/3D variability
     1037> display/cryosparc_P39_J499_component_002/J499_component_002_frame_003.mrc"
     1038> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1039> in cryosparc/3D variability
     1040> display/cryosparc_P39_J499_component_002/J499_component_002_frame_004.mrc"
     1041> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1042> in cryosparc/3D variability
     1043> display/cryosparc_P39_J499_component_002/J499_component_002_frame_005.mrc"
     1044> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1045> in cryosparc/3D variability
     1046> display/cryosparc_P39_J499_component_002/J499_component_002_frame_006.mrc"
     1047> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1048> in cryosparc/3D variability
     1049> display/cryosparc_P39_J499_component_002/J499_component_002_frame_007.mrc"
     1050> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1051> in cryosparc/3D variability
     1052> display/cryosparc_P39_J499_component_002/J499_component_002_frame_008.mrc"
     1053> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1054> in cryosparc/3D variability
     1055> display/cryosparc_P39_J499_component_002/J499_component_002_frame_009.mrc"
     1056> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1057> in cryosparc/3D variability
     1058> display/cryosparc_P39_J499_component_002/J499_component_002_frame_010.mrc"
     1059> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1060> in cryosparc/3D variability
     1061> display/cryosparc_P39_J499_component_002/J499_component_002_frame_011.mrc"
     1062> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1063> in cryosparc/3D variability
     1064> display/cryosparc_P39_J499_component_002/J499_component_002_frame_012.mrc"
     1065> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1066> in cryosparc/3D variability
     1067> display/cryosparc_P39_J499_component_002/J499_component_002_frame_013.mrc"
     1068> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1069> in cryosparc/3D variability
     1070> display/cryosparc_P39_J499_component_002/J499_component_002_frame_014.mrc"
     1071> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1072> in cryosparc/3D variability
     1073> display/cryosparc_P39_J499_component_002/J499_component_002_frame_015.mrc"
     1074> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1075> in cryosparc/3D variability
     1076> display/cryosparc_P39_J499_component_002/J499_component_002_frame_016.mrc"
     1077> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1078> in cryosparc/3D variability
     1079> display/cryosparc_P39_J499_component_002/J499_component_002_frame_017.mrc"
     1080> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1081> in cryosparc/3D variability
     1082> display/cryosparc_P39_J499_component_002/J499_component_002_frame_018.mrc"
     1083> "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older datasets
     1084> in cryosparc/3D variability
     1085> display/cryosparc_P39_J499_component_002/J499_component_002_frame_019.mrc"
     1086> vseries true
     1087
     1088Opened map series J499_component_002_frame_000.mrc as #6, 20 images, grid size
     1089400,400,400, pixel 0.813, shown at level 0.0185, step 2, values float32 
     1090
     1091> hide #!1 models
     1092
     1093> show #!1 models
     1094
     1095> hide #!1 models
     1096
     1097> show #!1 models
     1098
     1099> hide #!1 models
     1100
     1101> hide #!6 models
     1102
     1103> show #!2 models
     1104
     1105> show #!6 models
     1106
     1107> show #!5 models
     1108
     1109> show #!1 models
     1110
     1111> hide #!1 models
     1112
     1113> hide #!6 models
     1114
     1115> hide #!5 models
     1116
     1117> show #!5 models
     1118
     1119> hide #!2 models
     1120
     1121> show #!6 models
     1122
     1123> hide #!6 models
     1124
     1125> show #!6 models
     1126
     1127> hide #!6 models
     1128
     1129> show #!6 models
     1130
     1131> hide #!6 models
     1132
     1133> hide #!5 models
     1134
     1135> show #!6 models
     1136
     1137> show #!5 models
     1138
     1139> hide #!5 models
     1140
     1141> show #!5 models
     1142
     1143> hide #!5 models
     1144
     1145> show #!5 models
     1146
     1147> hide #!5 models
     1148
     1149> show #!5 models
     1150
     1151> hide #!5 models
     1152
     1153> show #!5 models
     1154
     1155> hide #!5 models
     1156
     1157> show #!5 models
     1158
     1159> show #!1 models
     1160
     1161> hide #!1 models
     1162
     1163> show #!1 models
     1164
     1165> hide #!1 models
     1166
     1167> show #!1 models
     1168
     1169> hide #!1 models
     1170
     1171> hide #!5 models
     1172
     1173> hide #!6 models
     1174
     1175> show #!6 models
     1176
     1177> show #!5 models
     1178
     1179> hide #!6 models
     1180
     1181> show #!6 models
     1182
     1183> hide #!6 models
     1184
     1185> hide #!5 models
     1186
     1187> show #!5 models
     1188
     1189> show #!6 models
     1190
     1191> hide #!6 models
     1192
     1193> show #!6 models
     1194
     1195> hide #!5 models
     1196
     1197> show #!1 models
     1198
     1199> hide #!1 models
     1200
     1201> show #!1 models
     1202
     1203> hide #!6 models
     1204
     1205> hide #!1 models
     1206
     1207> show #!6 models
     1208
     1209> hide #!6 models
     1210
     1211> show #!1 models
     1212
     1213> volume #6.1 level 0.03336
     1214
     1215> hide #!1 models
     1216
     1217> show #!1 models
     1218
     1219> show #!2 models
     1220
     1221> select #2
     1222
     12232 models selected 
     1224
     1225> show #2.1 models
     1226
     1227> hide #!2 models
     1228
     1229> show #!2 models
     1230
     1231> hide #!2 models
     1232
     1233> show #!2 models
     1234
     1235> hide #2.1 models
     1236
     1237> show #2.1 models
     1238
     1239> ~select #2.1
     1240
     12411 model selected 
     1242
     1243> ~select #2
     1244
     1245Nothing selected 
     1246
     1247> hide #!1 models
     1248
     1249> show #!3 models
     1250
     1251> show #!4 models
     1252
     1253> hide #!4 models
     1254
     1255> hide #!3 models
     1256
     1257> hide #!2 models
     1258
     1259> show #!1 models
     1260
     1261> play#1 loop true
     1262
     1263Unknown command: vseries play#1 loop true 
     1264
     1265> vseries play #1 loop true
     1266
     1267> volume #5.1 step 1
     1268
     1269QFileSystemWatcher::addPaths: list is empty 
     1270
     1271> save "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     1272> datasets in cryosparc/3D variability display/Component1/movie_session.cxs"
     1273> includeMaps true
     1274
     1275Traceback (most recent call last): 
     1276File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1277packages\chimerax\map_data\readarray.py", line 203, in allocate_array 
     1278m = alloc(shape, value_type) 
     1279numpy.core._exceptions._ArrayMemoryError: Unable to allocate 244. MiB for an
     1280array with shape (400, 400, 400) and data type float32 
     1281 
     1282During handling of the above exception, another exception occurred: 
     1283 
     1284Traceback (most recent call last): 
     1285File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1286packages\chimerax\core\session.py", line 283, in process 
     1287data = sm.take_snapshot(obj, session, self.state_flags) 
     1288File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1289packages\chimerax\map\session.py", line 200, in take_snapshot 
     1290data = state_from_grid_data(self.grid_data, session_path =
     1291session.session_file_path, 
     1292File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1293packages\chimerax\map\session.py", line 316, in state_from_grid_data 
     1294s['array'] = dt.matrix().tobytes() 
     1295File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1296packages\chimerax\map_data\griddata.py", line 302, in matrix 
     1297m = self.read_matrix(ijk_origin, ijk_size, ijk_step, progress) 
     1298File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1299packages\chimerax\map_data\mrc\mrc_grid.py", line 44, in read_matrix 
     1300return self.mrc_data.read_matrix(ijk_origin, ijk_size, ijk_step, progress) 
     1301File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1302packages\chimerax\map_data\mrc\mrc_format.py", line 284, in read_matrix 
     1303matrix = read_array(self.path, self.data_offset, 
     1304File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1305packages\chimerax\map_data\readarray.py", line 27, in read_array 
     1306m = read_full_array(path, byte_offset, full_size, 
     1307File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1308packages\chimerax\map_data\readarray.py", line 72, in read_full_array 
     1309a = allocate_array(size, type) 
     1310File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1311packages\chimerax\map_data\readarray.py", line 208, in allocate_array 
     1312report_memory_error(msize, value_type, progress) 
     1313File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1314packages\chimerax\map_data\readarray.py", line 229, in report_memory_error 
     1315raise UserError(e) 
     1316chimerax.core.errors.UserError: Could not allocate 244 Mbyte array of size
     1317400,400,400 and type float32. 
     1318 
     1319 
     1320The above exception was the direct cause of the following exception: 
     1321 
     1322Traceback (most recent call last): 
     1323File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1324packages\chimerax\core\session.py", line 262, in discovery 
     1325self.processed[key] = self.process(obj, parents) 
     1326File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1327packages\chimerax\core\session.py", line 286, in process 
     1328raise RuntimeError(msg) from e 
     1329RuntimeError: Error while saving session data for 'models' ->
     1330 ->
     1331 'surface' ->
     1332
     1333'J499_component_000_frame_009.mrc' ->   
     1334 
     1335During handling of the above exception, another exception occurred: 
     1336 
     1337Traceback (most recent call last): 
     1338File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1339packages\chimerax\core\session.py", line 890, in save 
     1340session.save(output, version=version, include_maps=include_maps) 
     1341File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1342packages\chimerax\core\session.py", line 619, in save 
     1343mgr.discovery(self._state_containers) 
     1344File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1345packages\chimerax\core\session.py", line 264, in discovery 
     1346raise ValueError("error processing: %s: %s" % (_obj_stack(parents, obj), e)) 
     1347ValueError: error processing: 'models' ->  ->  'surface' ->  'J499_component_000_frame_009.mrc' ->
     1348: Error while
     1349saving session data for 'models' ->  ->  'surface' ->  'J499_component_000_frame_009.mrc' ->
     1350 
     1351 
     1352ValueError: error processing: 'models' -> -> 'surface' ->
     1353'J499_component_000_frame_009.mrc' -> : Error while saving session data for
     1354'models' -> -> 'surface' -> 'J499_component_000_frame_009.mrc' -> 
     1355 
     1356File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1357packages\chimerax\core\session.py", line 264, in discovery 
     1358raise ValueError("error processing: %s: %s" % (_obj_stack(parents, obj), e)) 
     1359 
     1360See log for complete Python traceback. 
     1361 
     1362Traceback (most recent call last): 
     1363File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1364packages\chimerax\map_data\readarray.py", line 203, in allocate_array 
     1365m = alloc(shape, value_type) 
     1366numpy.core._exceptions._ArrayMemoryError: Unable to allocate 244. MiB for an
     1367array with shape (400, 400, 400) and data type float32 
     1368 
     1369During handling of the above exception, another exception occurred: 
     1370 
     1371Traceback (most recent call last): 
     1372File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1373packages\chimerax\core\session.py", line 283, in process 
     1374data = sm.take_snapshot(obj, session, self.state_flags) 
     1375File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1376packages\chimerax\map\session.py", line 200, in take_snapshot 
     1377data = state_from_grid_data(self.grid_data, session_path =
     1378session.session_file_path, 
     1379File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1380packages\chimerax\map\session.py", line 316, in state_from_grid_data 
     1381s['array'] = dt.matrix().tobytes() 
     1382File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1383packages\chimerax\map_data\griddata.py", line 302, in matrix 
     1384m = self.read_matrix(ijk_origin, ijk_size, ijk_step, progress) 
     1385File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1386packages\chimerax\map_data\mrc\mrc_grid.py", line 44, in read_matrix 
     1387return self.mrc_data.read_matrix(ijk_origin, ijk_size, ijk_step, progress) 
     1388File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1389packages\chimerax\map_data\mrc\mrc_format.py", line 284, in read_matrix 
     1390matrix = read_array(self.path, self.data_offset, 
     1391File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1392packages\chimerax\map_data\readarray.py", line 27, in read_array 
     1393m = read_full_array(path, byte_offset, full_size, 
     1394File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1395packages\chimerax\map_data\readarray.py", line 72, in read_full_array 
     1396a = allocate_array(size, type) 
     1397File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1398packages\chimerax\map_data\readarray.py", line 208, in allocate_array 
     1399report_memory_error(msize, value_type, progress) 
     1400File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1401packages\chimerax\map_data\readarray.py", line 229, in report_memory_error 
     1402raise UserError(e) 
     1403chimerax.core.errors.UserError: Could not allocate 244 Mbyte array of size
     1404400,400,400 and type float32. 
     1405 
     1406 
     1407The above exception was the direct cause of the following exception: 
     1408 
     1409Traceback (most recent call last): 
     1410File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1411packages\chimerax\core\session.py", line 262, in discovery 
     1412self.processed[key] = self.process(obj, parents) 
     1413File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1414packages\chimerax\core\session.py", line 286, in process 
     1415raise RuntimeError(msg) from e 
     1416RuntimeError: Error while saving session data for 'models' ->
     1417 ->
     1418 'surface' ->
     1419
     1420'J499_component_000_frame_009.mrc' ->   
     1421 
     1422During handling of the above exception, another exception occurred: 
     1423 
     1424Traceback (most recent call last): 
     1425File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1426packages\chimerax\save_command\dialog.py", line 116, in   
     1427lambda *args, ses=session: show_save_file_dialog(ses), tool_tip="Save output
     1428file", 
     1429File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1430packages\chimerax\save_command\dialog.py", line 127, in show_save_file_dialog 
     1431_dlg.display(session, **kw) 
     1432File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1433packages\chimerax\save_command\dialog.py", line 51, in display 
     1434run(session, cmd) 
     1435File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1436packages\chimerax\core\commands\run.py", line 36, in run 
     1437results = command.run(text, log=log, return_json=return_json) 
     1438File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1439packages\chimerax\core\commands\cli.py", line 2856, in run 
     1440result = ci.function(session, **kw_args) 
     1441File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1442packages\chimerax\save_command\cmd.py", line 75, in cmd_save 
     1443Command(session, registry=registry).run(provider_cmd_text, log=log) 
     1444File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1445packages\chimerax\core\commands\cli.py", line 2856, in run 
     1446result = ci.function(session, **kw_args) 
     1447File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1448packages\chimerax\save_command\cmd.py", line 89, in provider_save 
     1449saver_info.save(session, path, **provider_kw) 
     1450File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1451packages\chimerax\core_formats\\__init__.py", line 84, in save 
     1452return cxs_save(session, path, **kw) 
     1453File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1454packages\chimerax\core\session.py", line 890, in save 
     1455session.save(output, version=version, include_maps=include_maps) 
     1456File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1457packages\chimerax\core\session.py", line 619, in save 
     1458mgr.discovery(self._state_containers) 
     1459File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1460packages\chimerax\core\session.py", line 264, in discovery 
     1461raise ValueError("error processing: %s: %s" % (_obj_stack(parents, obj), e)) 
     1462ValueError: error processing: 'models' ->  ->  'surface' ->  'J499_component_000_frame_009.mrc' ->
     1463: Error while
     1464saving session data for 'models' ->  ->  'surface' ->  'J499_component_000_frame_009.mrc' ->
     1465 
     1466 
     1467ValueError: error processing: 'models' -> -> 'surface' ->
     1468'J499_component_000_frame_009.mrc' -> : Error while saving session data for
     1469'models' -> -> 'surface' -> 'J499_component_000_frame_009.mrc' -> 
     1470 
     1471File "C:\Program Files\ChimeraX 1.3\bin\lib\site-
     1472packages\chimerax\core\session.py", line 264, in discovery 
     1473raise ValueError("error processing: %s: %s" % (_obj_stack(parents, obj), e)) 
     1474 
     1475See log for complete Python traceback. 
     1476 
     1477
     1478> vseries save #1 ~/Desktop/test.cmap subregion 100,0,0,200,511,150 threshold
     1479> 140 valueType uint8
     1480
     1481> vseries play #5 loop true
     1482
     1483> hide #!1 models
     1484
     1485> show #!5 models
     1486
     1487> hide #!5 models
     1488
     1489> show #!5 models
     1490
     1491> hide #!5 models
     1492
     1493> show #!5 models
     1494
     1495> save "Y:/sudipag/Sudipa/Projects/2023/CRBN-DDB1-HPK1/Reanalysis of older
     1496> datasets in cryosparc/3D variability display/Component0/movie.cxs"
     1497
     1498> movie record
     1499
     1500Already recording a movie 
     1501
     1502> volume all hide
     1503
     1504> movie record
     1505
     1506Already recording a movie 
     1507
     1508> volume all hide
     1509
     1510> movie record
     1511
     1512Already recording a movie 
     1513
     1514> volume all hide
     1515
     1516> movie record
     1517
     1518Already recording a movie 
     1519
     1520> volume all hide
     1521
     1522> movie record
     1523
     1524Already recording a movie 
     1525
     1526> volume all hide
     1527
     1528> movie record
     1529
     1530Already recording a movie 
     1531
     1532> vseries play #6 loop true
     1533
     1534> hide #!5 models
     1535
     1536> show #!6 models
     1537
     1538> hide #!6 models
     1539
     1540> show #!6 models
     1541
     1542> show #!5 models
     1543
     1544> show #!1 models
     1545
     1546> color #5 #ffaaff models transparency 0
     1547
     1548> color #5 #55ff00 models transparency 0
     1549
     1550> color #5 cyan models transparency 0
     1551
     1552> hide #!1 models
     1553
     1554> hide #!5 models
     1555
     1556> hide #!6 models
     1557
     1558> show #!1 models
     1559
     1560Error processing trigger "graphics update": 
     1561 
     1562You deleted or moved a volume file that is still open in ChimeraX. 
     1563 
     1564None 
     1565 
     1566To allow fast initial display of volume data ChimeraX does not read all data
     1567from the file when it is first opened, and will later read more data when
     1568needed. ChimeraX got an error trying to read the above file. 
     1569
     1570
     1571===== Log before crash end =====
     1572
     1573Log:
     1574UCSF ChimeraX version: 1.3 (2021-12-08) 
     1575© 2016-2021 Regents of the University of California. All rights reserved. 
     1576How to cite UCSF ChimeraX 
     1577
     1578
     1579
     1580
     1581OpenGL version: 3.3.0 - Build 27.20.100.9168
     1582OpenGL renderer: Intel(R) Iris(R) Xe Graphics
     1583OpenGL vendor: Intel
     1584Manufacturer: LENOVO
     1585Model: 20XXS0KR00
     1586OS: Microsoft Windows 10 Enterprise (Build 19044)
     1587Memory: 16,868,499,456
     1588MaxProcessMemory: 137,438,953,344
     1589CPU: 8 11th Gen Intel(R) Core(TM) i7-1185G7 @ 3.00GHz
     1590OSLanguage: en-US
     1591Locale: ('en_US', 'cp1252')
     1592PyQt5 5.15.2, Qt 5.15.2
     1593Installed Packages:
     1594    alabaster: 0.7.12
     1595    appdirs: 1.4.4
     1596    Babel: 2.9.1
     1597    backcall: 0.2.0
     1598    blockdiag: 2.0.1
     1599    certifi: 2021.10.8
     1600    cftime: 1.5.1.1
     1601    charset-normalizer: 2.0.9
     1602    ChimeraX-AddCharge: 1.2.2
     1603    ChimeraX-AddH: 2.1.11
     1604    ChimeraX-AlignmentAlgorithms: 2.0
     1605    ChimeraX-AlignmentHdrs: 3.2
     1606    ChimeraX-AlignmentMatrices: 2.0
     1607    ChimeraX-Alignments: 2.2.3
     1608    ChimeraX-AlphaFold: 1.0
     1609    ChimeraX-AltlocExplorer: 1.0.1
     1610    ChimeraX-AmberInfo: 1.0
     1611    ChimeraX-Arrays: 1.0
     1612    ChimeraX-Atomic: 1.31
     1613    ChimeraX-AtomicLibrary: 4.2
     1614    ChimeraX-AtomSearch: 2.0
     1615    ChimeraX-AtomSearchLibrary: 1.0
     1616    ChimeraX-AxesPlanes: 2.0
     1617    ChimeraX-BasicActions: 1.1
     1618    ChimeraX-BILD: 1.0
     1619    ChimeraX-BlastProtein: 2.0
     1620    ChimeraX-BondRot: 2.0
     1621    ChimeraX-BugReporter: 1.0
     1622    ChimeraX-BuildStructure: 2.6.1
     1623    ChimeraX-Bumps: 1.0
     1624    ChimeraX-BundleBuilder: 1.1
     1625    ChimeraX-ButtonPanel: 1.0
     1626    ChimeraX-CageBuilder: 1.0
     1627    ChimeraX-CellPack: 1.0
     1628    ChimeraX-Centroids: 1.2
     1629    ChimeraX-ChemGroup: 2.0
     1630    ChimeraX-Clashes: 2.2.2
     1631    ChimeraX-Clipper: 0.17.0
     1632    ChimeraX-ColorActions: 1.0
     1633    ChimeraX-ColorGlobe: 1.0
     1634    ChimeraX-ColorKey: 1.5
     1635    ChimeraX-CommandLine: 1.1.5
     1636    ChimeraX-ConnectStructure: 2.0
     1637    ChimeraX-Contacts: 1.0
     1638    ChimeraX-Core: 1.3
     1639    ChimeraX-CoreFormats: 1.1
     1640    ChimeraX-coulombic: 1.3.2
     1641    ChimeraX-Crosslinks: 1.0
     1642    ChimeraX-Crystal: 1.0
     1643    ChimeraX-CrystalContacts: 1.0
     1644    ChimeraX-DataFormats: 1.2.2
     1645    ChimeraX-Dicom: 1.0
     1646    ChimeraX-DistMonitor: 1.1.5
     1647    ChimeraX-DistUI: 1.0
     1648    ChimeraX-Dssp: 2.0
     1649    ChimeraX-EMDB-SFF: 1.0
     1650    ChimeraX-ExperimentalCommands: 1.0
     1651    ChimeraX-FileHistory: 1.0
     1652    ChimeraX-FunctionKey: 1.0
     1653    ChimeraX-Geometry: 1.1
     1654    ChimeraX-gltf: 1.0
     1655    ChimeraX-Graphics: 1.1
     1656    ChimeraX-Hbonds: 2.1.2
     1657    ChimeraX-Help: 1.2
     1658    ChimeraX-HKCage: 1.3
     1659    ChimeraX-IHM: 1.1
     1660    ChimeraX-ImageFormats: 1.2
     1661    ChimeraX-IMOD: 1.0
     1662    ChimeraX-IO: 1.0.1
     1663    ChimeraX-ISOLDE: 1.3
     1664    ChimeraX-ItemsInspection: 1.0
     1665    ChimeraX-Label: 1.1
     1666    ChimeraX-ListInfo: 1.1.1
     1667    ChimeraX-Log: 1.1.4
     1668    ChimeraX-LookingGlass: 1.1
     1669    ChimeraX-Maestro: 1.8.1
     1670    ChimeraX-Map: 1.1
     1671    ChimeraX-MapData: 2.0
     1672    ChimeraX-MapEraser: 1.0
     1673    ChimeraX-MapFilter: 2.0
     1674    ChimeraX-MapFit: 2.0
     1675    ChimeraX-MapSeries: 2.1
     1676    ChimeraX-Markers: 1.0
     1677    ChimeraX-Mask: 1.0
     1678    ChimeraX-MatchMaker: 2.0.4
     1679    ChimeraX-MDcrds: 2.6
     1680    ChimeraX-MedicalToolbar: 1.0.1
     1681    ChimeraX-Meeting: 1.0
     1682    ChimeraX-MLP: 1.1
     1683    ChimeraX-mmCIF: 2.4
     1684    ChimeraX-MMTF: 2.1
     1685    ChimeraX-Modeller: 1.2.6
     1686    ChimeraX-ModelPanel: 1.2.1
     1687    ChimeraX-ModelSeries: 1.0
     1688    ChimeraX-Mol2: 2.0
     1689    ChimeraX-Morph: 1.0
     1690    ChimeraX-MouseModes: 1.1
     1691    ChimeraX-Movie: 1.0
     1692    ChimeraX-Neuron: 1.0
     1693    ChimeraX-Nucleotides: 2.0.2
     1694    ChimeraX-OpenCommand: 1.7
     1695    ChimeraX-PDB: 2.6.5
     1696    ChimeraX-PDBBio: 1.0
     1697    ChimeraX-PDBLibrary: 1.0.2
     1698    ChimeraX-PDBMatrices: 1.0
     1699    ChimeraX-PickBlobs: 1.0
     1700    ChimeraX-Positions: 1.0
     1701    ChimeraX-PresetMgr: 1.0.1
     1702    ChimeraX-PubChem: 2.1
     1703    ChimeraX-ReadPbonds: 1.0.1
     1704    ChimeraX-Registration: 1.1
     1705    ChimeraX-RemoteControl: 1.0
     1706    ChimeraX-ResidueFit: 1.0
     1707    ChimeraX-RestServer: 1.1
     1708    ChimeraX-RNALayout: 1.0
     1709    ChimeraX-RotamerLibMgr: 2.0.1
     1710    ChimeraX-RotamerLibsDunbrack: 2.0
     1711    ChimeraX-RotamerLibsDynameomics: 2.0
     1712    ChimeraX-RotamerLibsRichardson: 2.0
     1713    ChimeraX-SaveCommand: 1.5
     1714    ChimeraX-SchemeMgr: 1.0
     1715    ChimeraX-SDF: 2.0
     1716    ChimeraX-Segger: 1.0
     1717    ChimeraX-Segment: 1.0
     1718    ChimeraX-SelInspector: 1.0
     1719    ChimeraX-SeqView: 2.4.6
     1720    ChimeraX-Shape: 1.0.1
     1721    ChimeraX-Shell: 1.0
     1722    ChimeraX-Shortcuts: 1.1
     1723    ChimeraX-ShowAttr: 1.0
     1724    ChimeraX-ShowSequences: 1.0
     1725    ChimeraX-SideView: 1.0
     1726    ChimeraX-Smiles: 2.1
     1727    ChimeraX-SmoothLines: 1.0
     1728    ChimeraX-SpaceNavigator: 1.0
     1729    ChimeraX-StdCommands: 1.6.1
     1730    ChimeraX-STL: 1.0
     1731    ChimeraX-Storm: 1.0
     1732    ChimeraX-Struts: 1.0
     1733    ChimeraX-Surface: 1.0
     1734    ChimeraX-SwapAA: 2.0
     1735    ChimeraX-SwapRes: 2.1
     1736    ChimeraX-TapeMeasure: 1.0
     1737    ChimeraX-Test: 1.0
     1738    ChimeraX-Toolbar: 1.1
     1739    ChimeraX-ToolshedUtils: 1.2
     1740    ChimeraX-Tug: 1.0
     1741    ChimeraX-UI: 1.13.7
     1742    ChimeraX-uniprot: 2.2
     1743    ChimeraX-UnitCell: 1.0
     1744    ChimeraX-ViewDockX: 1.0.1
     1745    ChimeraX-VIPERdb: 1.0
     1746    ChimeraX-Vive: 1.1
     1747    ChimeraX-VolumeMenu: 1.0
     1748    ChimeraX-VTK: 1.0
     1749    ChimeraX-WavefrontOBJ: 1.0
     1750    ChimeraX-WebCam: 1.0
     1751    ChimeraX-WebServices: 1.0
     1752    ChimeraX-Zone: 1.0
     1753    colorama: 0.4.4
     1754    comtypes: 1.1.10
     1755    cxservices: 1.1
     1756    cycler: 0.11.0
     1757    Cython: 0.29.24
     1758    decorator: 5.1.0
     1759    docutils: 0.17.1
     1760    filelock: 3.0.12
     1761    funcparserlib: 0.3.6
     1762    grako: 3.16.5
     1763    h5py: 3.6.0
     1764    html2text: 2020.1.16
     1765    idna: 3.3
     1766    ihm: 0.21
     1767    imagecodecs: 2021.4.28
     1768    imagesize: 1.3.0
     1769    ipykernel: 5.5.5
     1770    ipython: 7.23.1
     1771    ipython-genutils: 0.2.0
     1772    jedi: 0.18.0
     1773    Jinja2: 3.0.1
     1774    jupyter-client: 6.1.12
     1775    jupyter-core: 4.9.1
     1776    kiwisolver: 1.3.2
     1777    lxml: 4.6.3
     1778    lz4: 3.1.3
     1779    MarkupSafe: 2.0.1
     1780    matplotlib: 3.4.3
     1781    matplotlib-inline: 0.1.3
     1782    msgpack: 1.0.2
     1783    netCDF4: 1.5.7
     1784    networkx: 2.6.3
     1785    numexpr: 2.8.0
     1786    numpy: 1.21.2
     1787    openvr: 1.16.801
     1788    packaging: 21.3
     1789    ParmEd: 3.2.0
     1790    parso: 0.8.3
     1791    pickleshare: 0.7.5
     1792    Pillow: 8.3.2
     1793    pip: 21.2.4
     1794    pkginfo: 1.7.1
     1795    prompt-toolkit: 3.0.23
     1796    psutil: 5.8.0
     1797    pycollada: 0.7.1
     1798    pydicom: 2.1.2
     1799    Pygments: 2.10.0
     1800    PyOpenGL: 3.1.5
     1801    PyOpenGL-accelerate: 3.1.5
     1802    pyparsing: 3.0.6
     1803    PyQt5-commercial: 5.15.2
     1804    PyQt5-sip: 12.8.1
     1805    PyQtWebEngine-commercial: 5.15.2
     1806    python-dateutil: 2.8.2
     1807    pytz: 2021.3
     1808    pywin32: 228
     1809    pyzmq: 22.3.0
     1810    qtconsole: 5.1.1
     1811    QtPy: 1.11.3
     1812    RandomWords: 0.3.0
     1813    requests: 2.26.0
     1814    scipy: 1.7.1
     1815    setuptools: 57.5.0
     1816    sfftk-rw: 0.7.1
     1817    six: 1.16.0
     1818    snowballstemmer: 2.2.0
     1819    sortedcontainers: 2.4.0
     1820    Sphinx: 4.2.0
     1821    sphinx-autodoc-typehints: 1.12.0
     1822    sphinxcontrib-applehelp: 1.0.2
     1823    sphinxcontrib-blockdiag: 2.0.0
     1824    sphinxcontrib-devhelp: 1.0.2
     1825    sphinxcontrib-htmlhelp: 2.0.0
     1826    sphinxcontrib-jsmath: 1.0.1
     1827    sphinxcontrib-qthelp: 1.0.3
     1828    sphinxcontrib-serializinghtml: 1.1.5
     1829    suds-jurko: 0.6
     1830    tables: 3.6.1
     1831    tifffile: 2021.4.8
     1832    tinyarray: 1.2.3
     1833    tornado: 6.1
     1834    traitlets: 5.1.1
     1835    urllib3: 1.26.7
     1836    wcwidth: 0.2.5
     1837    webcolors: 1.11.1
     1838    wheel: 0.37.0
     1839    wheel-filename: 1.3.0
     1840    WMI: 1.5.1
     1841
     1842}}}