Changes between Version 1 and Version 2 of Ticket #7358, comment 8


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Timestamp:
Aug 12, 2022, 4:24:40 PM (3 years ago)
Author:
Tom Goddard

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  • Ticket #7358, comment 8

    v1 v2  
     1**BLAST of NR database, slow and 180 GB memory use**
     2
    13Our current ChimeraX BLAST search of the NR (non-redundant) database brings 179 GB of blast database files (3 times larger than AlphaFold DB version 3) into memory on the server and takes 50 minutes, ticket #7388.  I measured this by doing an NR sequence search in ChimeraX and monitoring it on the server (franklin).