Changes between Initial Version and Version 1 of Ticket #7358, comment 7


Ignore:
Timestamp:
Aug 3, 2022, 5:44:23 PM (3 years ago)
Author:
Tom Goddard

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #7358, comment 7

    initial v1  
    2727time ~/mmseqs/bin/mmseqs createindex alphafold214MDB tmp --split-memory-limit 32G --compressed 1
    2828}}}
     29
     30This mmseqs2 bug report discussed high memory use for mmseqs search despite splitting the index.  It describes mmap() failures.  But apparently that problem is that SGE only allows limiting vmem instead of real memory (Dec 2020) and mmseqs still uses large vmem, but supposedly lower real memory.
     31
     32https://github.com/soedinglab/MMseqs2/issues/338