Changes between Initial Version and Version 1 of Ticket #6426
- Timestamp:
- Mar 22, 2022, 9:48:20 AM (4 years ago)
Legend:
- Unmodified
- Added
- Removed
- Modified
-
Ticket #6426
- Property Component Unassigned → Window Toolkit
- Property Owner set to
- Property Platform → all
- Property Project → ChimeraX
- Property Status new → assigned
- Property Summary ChimeraX bug report submission → Crash in self.graphics_window.mapFromGlobal(QCursor.pos())
-
Ticket #6426 – Description
initial v1 13 13 File "/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/updateloop.py", line 140 in _redraw_timer_callback 14 14 File "/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py301event_loop/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py867init/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/ChimeraX_main.py1018/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py87_run_code/private/var/folders/d5/32cnx92x3j90t8qyqsk66k1r0000gn/T/AppTranslocation/E2C81661-E619-4B7F-B28B-8A4E579BBC8B/d/ChimeraX-1.3.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py197_run_module_as_main 15 16 {"app_name":"ChimeraX","timestamp":"2022-03-21 22:03:58.00 +0000","app_version":"","slice_uuid":"9596eff5-d2be-396c-9c4e-6177235c3dae","build_version":"","platform":1,"share_with_app_devs":0,"is_first_party":1,"bug_type":"309","os_version":"macOS 12.2.1 (21D62)","incident_id":"34F5F925-E9FE-465C-B336-7119F697F267","name":"ChimeraX"} 17 { 18 "uptime" : 93000, 19 "procLaunch" : "2022-03-21 22:01:44.9893 +0000", 20 "procRole" : "Background", 21 "version" : 2, 22 "userID" : 501, 23 "deployVersion" : 210, 24 "modelCode" : "MacBookPro17,1", 25 "procStartAbsTime" : 2229679948605, 26 "coalitionID" : 15006, 27 "osVersion" : { 28 "train" : "macOS 12.2.1", 29 "build" : "21D62", 30 "releaseType" : "User" 31 }, 32 "captureTime" : "2022-03-21 22:03:57.9154 +0000", 33 "incident" : "34F5F925-E9FE-465C-B336-7119F697F267", 34 "bug_type" : "309", 35 "pid" : 19923, 36 "procExitAbsTime" : 2232869602972, 37 "translated" : true, 38 "cpuType" : "X86-64", 39 "procName" : "ChimeraX", 40 "procPath" : 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All rights reserved. 193 How to cite UCSF ChimeraX 194 Updating list of available bundles failed: Internal Server Error 195 196 197 ===== Log before crash end ===== 198 199 Log: 200 UCSF ChimeraX version: 1.3 (2021-12-08) 201 © 2016-2021 Regents of the University of California. All rights reserved. 202 How to cite UCSF ChimeraX 203 204 205 206 207 OpenGL version: 4.1 Metal - 76.3 208 OpenGL renderer: Apple M1 209 OpenGL vendor: AppleHardware: 210 211 Hardware Overview: 212 213 Model Name: MacBook Pro 214 Model Identifier: MacBookPro17,1 215 Processor Name: Unknown 216 Processor Speed: 2.4 GHz 217 Number of Processors: 1 218 Total Number of Cores: 8 219 L2 Cache: 8 MB 220 Memory: 16 GB 221 222 Software: 223 224 System Software Overview: 225 226 System Version: macOS 12.2.1 (21D62) 227 Kernel Version: Darwin 21.3.0 228 Time since boot: 5 days 7:24 229 230 Graphics/Displays: 231 232 Apple M1: 233 234 Chipset Model: Apple M1 235 Type: GPU 236 Bus: Built-In 237 Total Number of Cores: 8 238 Vendor: Apple (0x106b) 239 Metal Family: Supported, Metal GPUFamily Apple 7 240 Displays: 241 Color LCD: 242 Display Type: Built-In Retina LCD 243 Resolution: 2560 x 1600 Retina 244 Main Display: Yes 245 Mirror: Off 246 Online: Yes 247 Automatically Adjust Brightness: No 248 Connection Type: Internal 249 250 Locale: (None, 'UTF-8') 251 PyQt5 5.15.2, Qt 5.15.2 252 Installed Packages: 253 alabaster: 0.7.12 254 appdirs: 1.4.4 255 appnope: 0.1.2 256 Babel: 2.9.1 257 backcall: 0.2.0 258 blockdiag: 2.0.1 259 certifi: 2021.5.30 260 cftime: 1.5.1.1 261 charset-normalizer: 2.0.9 262 ChimeraX-AddCharge: 1.2.2 263 ChimeraX-AddH: 2.1.11 264 ChimeraX-AlignmentAlgorithms: 2.0 265 ChimeraX-AlignmentHdrs: 3.2 266 ChimeraX-AlignmentMatrices: 2.0 267 ChimeraX-Alignments: 2.2.3 268 ChimeraX-AlphaFold: 1.0 269 ChimeraX-AltlocExplorer: 1.0.1 270 ChimeraX-AmberInfo: 1.0 271 ChimeraX-Arrays: 1.0 272 ChimeraX-Atomic: 1.31 273 ChimeraX-AtomicLibrary: 4.2 274 ChimeraX-AtomSearch: 2.0 275 ChimeraX-AtomSearchLibrary: 1.0 276 ChimeraX-AxesPlanes: 2.0 277 ChimeraX-BasicActions: 1.1 278 ChimeraX-BILD: 1.0 279 ChimeraX-BlastProtein: 2.0 280 ChimeraX-BondRot: 2.0 281 ChimeraX-BugReporter: 1.0 282 ChimeraX-BuildStructure: 2.6.1 283 ChimeraX-Bumps: 1.0 284 ChimeraX-BundleBuilder: 1.1 285 ChimeraX-ButtonPanel: 1.0 286 ChimeraX-CageBuilder: 1.0 287 ChimeraX-CellPack: 1.0 288 ChimeraX-Centroids: 1.2 289 ChimeraX-ChemGroup: 2.0 290 ChimeraX-Clashes: 2.2.2 291 ChimeraX-ColorActions: 1.0 292 ChimeraX-ColorGlobe: 1.0 293 ChimeraX-ColorKey: 1.5 294 ChimeraX-CommandLine: 1.1.5 295 ChimeraX-ConnectStructure: 2.0 296 ChimeraX-Contacts: 1.0 297 ChimeraX-Core: 1.3 298 ChimeraX-CoreFormats: 1.1 299 ChimeraX-coulombic: 1.3.2 300 ChimeraX-Crosslinks: 1.0 301 ChimeraX-Crystal: 1.0 302 ChimeraX-CrystalContacts: 1.0 303 ChimeraX-DataFormats: 1.2.2 304 ChimeraX-Dicom: 1.0 305 ChimeraX-DistMonitor: 1.1.5 306 ChimeraX-DistUI: 1.0 307 ChimeraX-Dssp: 2.0 308 ChimeraX-EMDB-SFF: 1.0 309 ChimeraX-ExperimentalCommands: 1.0 310 ChimeraX-FileHistory: 1.0 311 ChimeraX-FunctionKey: 1.0 312 ChimeraX-Geometry: 1.1 313 ChimeraX-gltf: 1.0 314 ChimeraX-Graphics: 1.1 315 ChimeraX-Hbonds: 2.1.2 316 ChimeraX-Help: 1.2 317 ChimeraX-HKCage: 1.3 318 ChimeraX-IHM: 1.1 319 ChimeraX-ImageFormats: 1.2 320 ChimeraX-IMOD: 1.0 321 ChimeraX-IO: 1.0.1 322 ChimeraX-ItemsInspection: 1.0 323 ChimeraX-Label: 1.1 324 ChimeraX-ListInfo: 1.1.1 325 ChimeraX-Log: 1.1.4 326 ChimeraX-LookingGlass: 1.1 327 ChimeraX-Maestro: 1.8.1 328 ChimeraX-Map: 1.1 329 ChimeraX-MapData: 2.0 330 ChimeraX-MapEraser: 1.0 331 ChimeraX-MapFilter: 2.0 332 ChimeraX-MapFit: 2.0 333 ChimeraX-MapSeries: 2.1 334 ChimeraX-Markers: 1.0 335 ChimeraX-Mask: 1.0 336 ChimeraX-MatchMaker: 2.0.4 337 ChimeraX-MDcrds: 2.6 338 ChimeraX-MedicalToolbar: 1.0.1 339 ChimeraX-Meeting: 1.0 340 ChimeraX-MLP: 1.1 341 ChimeraX-mmCIF: 2.4 342 ChimeraX-MMTF: 2.1 343 ChimeraX-Modeller: 1.2.6 344 ChimeraX-ModelPanel: 1.2.1 345 ChimeraX-ModelSeries: 1.0 346 ChimeraX-Mol2: 2.0 347 ChimeraX-Morph: 1.0 348 ChimeraX-MouseModes: 1.1 349 ChimeraX-Movie: 1.0 350 ChimeraX-Neuron: 1.0 351 ChimeraX-Nucleotides: 2.0.2 352 ChimeraX-OpenCommand: 1.7 353 ChimeraX-PDB: 2.6.5 354 ChimeraX-PDBBio: 1.0 355 ChimeraX-PDBLibrary: 1.0.2 356 ChimeraX-PDBMatrices: 1.0 357 ChimeraX-PickBlobs: 1.0 358 ChimeraX-Positions: 1.0 359 ChimeraX-PresetMgr: 1.0.1 360 ChimeraX-PubChem: 2.1 361 ChimeraX-ReadPbonds: 1.0.1 362 ChimeraX-Registration: 1.1 363 ChimeraX-RemoteControl: 1.0 364 ChimeraX-ResidueFit: 1.0 365 ChimeraX-RestServer: 1.1 366 ChimeraX-RNALayout: 1.0 367 ChimeraX-RotamerLibMgr: 2.0.1 368 ChimeraX-RotamerLibsDunbrack: 2.0 369 ChimeraX-RotamerLibsDynameomics: 2.0 370 ChimeraX-RotamerLibsRichardson: 2.0 371 ChimeraX-SaveCommand: 1.5 372 ChimeraX-SchemeMgr: 1.0 373 ChimeraX-SDF: 2.0 374 ChimeraX-Segger: 1.0 375 ChimeraX-Segment: 1.0 376 ChimeraX-SelInspector: 1.0 377 ChimeraX-SeqView: 2.4.6 378 ChimeraX-Shape: 1.0.1 379 ChimeraX-Shell: 1.0 380 ChimeraX-Shortcuts: 1.1 381 ChimeraX-ShowAttr: 1.0 382 ChimeraX-ShowSequences: 1.0 383 ChimeraX-SideView: 1.0 384 ChimeraX-Smiles: 2.1 385 ChimeraX-SmoothLines: 1.0 386 ChimeraX-SpaceNavigator: 1.0 387 ChimeraX-StdCommands: 1.6.1 388 ChimeraX-STL: 1.0 389 ChimeraX-Storm: 1.0 390 ChimeraX-Struts: 1.0 391 ChimeraX-Surface: 1.0 392 ChimeraX-SwapAA: 2.0 393 ChimeraX-SwapRes: 2.1 394 ChimeraX-TapeMeasure: 1.0 395 ChimeraX-Test: 1.0 396 ChimeraX-Toolbar: 1.1 397 ChimeraX-ToolshedUtils: 1.2 398 ChimeraX-Tug: 1.0 399 ChimeraX-UI: 1.13.7 400 ChimeraX-uniprot: 2.2 401 ChimeraX-UnitCell: 1.0 402 ChimeraX-ViewDockX: 1.0.1 403 ChimeraX-VIPERdb: 1.0 404 ChimeraX-Vive: 1.1 405 ChimeraX-VolumeMenu: 1.0 406 ChimeraX-VTK: 1.0 407 ChimeraX-WavefrontOBJ: 1.0 408 ChimeraX-WebCam: 1.0 409 ChimeraX-WebServices: 1.0 410 ChimeraX-Zone: 1.0 411 colorama: 0.4.4 412 cxservices: 1.1 413 cycler: 0.11.0 414 Cython: 0.29.24 415 decorator: 5.1.0 416 docutils: 0.17.1 417 filelock: 3.0.12 418 funcparserlib: 0.3.6 419 grako: 3.16.5 420 h5py: 3.6.0 421 html2text: 2020.1.16 422 idna: 3.3 423 ihm: 0.21 424 imagecodecs: 2021.4.28 425 imagesize: 1.3.0 426 ipykernel: 5.5.5 427 ipython: 7.23.1 428 ipython-genutils: 0.2.0 429 jedi: 0.18.0 430 Jinja2: 3.0.1 431 jupyter-client: 6.1.12 432 jupyter-core: 4.9.1 433 kiwisolver: 1.3.2 434 lxml: 4.6.3 435 lz4: 3.1.3 436 MarkupSafe: 2.0.1 437 matplotlib: 3.4.3 438 matplotlib-inline: 0.1.3 439 msgpack: 1.0.2 440 netCDF4: 1.5.7 441 networkx: 2.6.3 442 numexpr: 2.8.0 443 numpy: 1.21.2 444 openvr: 1.16.801 445 packaging: 21.0 446 ParmEd: 3.2.0 447 parso: 0.8.3 448 pexpect: 4.8.0 449 pickleshare: 0.7.5 450 Pillow: 8.3.2 451 pip: 21.2.4 452 pkginfo: 1.7.1 453 prompt-toolkit: 3.0.23 454 psutil: 5.8.0 455 ptyprocess: 0.7.0 456 pycollada: 0.7.1 457 pydicom: 2.1.2 458 Pygments: 2.10.0 459 PyOpenGL: 3.1.5 460 PyOpenGL-accelerate: 3.1.5 461 pyparsing: 3.0.6 462 PyQt5-commercial: 5.15.2 463 PyQt5-sip: 12.8.1 464 PyQtWebEngine-commercial: 5.15.2 465 python-dateutil: 2.8.2 466 pytz: 2021.3 467 pyzmq: 22.3.0 468 qtconsole: 5.1.1 469 QtPy: 1.11.3 470 RandomWords: 0.3.0 471 requests: 2.26.0 472 scipy: 1.7.1 473 setuptools: 57.5.0 474 sfftk-rw: 0.7.1 475 six: 1.16.0 476 snowballstemmer: 2.2.0 477 sortedcontainers: 2.4.0 478 Sphinx: 4.2.0 479 sphinx-autodoc-typehints: 1.12.0 480 sphinxcontrib-applehelp: 1.0.2 481 sphinxcontrib-blockdiag: 2.0.0 482 sphinxcontrib-devhelp: 1.0.2 483 sphinxcontrib-htmlhelp: 2.0.0 484 sphinxcontrib-jsmath: 1.0.1 485 sphinxcontrib-qthelp: 1.0.3 486 sphinxcontrib-serializinghtml: 1.1.5 487 suds-jurko: 0.6 488 tifffile: 2021.4.8 489 tinyarray: 1.2.3 490 tornado: 6.1 491 traitlets: 5.1.1 492 urllib3: 1.26.7 493 wcwidth: 0.2.5 494 webcolors: 1.11.1 495 wheel: 0.37.0 496 wheel-filename: 1.3.0 497 498 }}}