33 | | Looking in indexes: https://pypi.org/simple, |
34 | | https://cxtoolshed.rbvi.ucsf.edu/pypi/ Requirement already satisfied: |
35 | | ChimeraX-ISOLDE==1.2.2 in c:\users\dell\appdata\local\ucsf\chimerax\1.2\site- |
36 | | packages (1.2.2) Requirement already satisfied: ChimeraX-Atomic~=1.13.0 in |
37 | | c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) |
38 | | (1.13.2) Collecting ChimeraX-Clipper~=0.16.0 Using cached |
39 | | https://cxtoolshed.rbvi.ucsf.edu/media/chimeraxclipper/releases/0.16.0/ChimeraX_Clipper-0.16.0-cp38-cp38-win_amd64.whl |
40 | | (22.9 MB) Requirement already satisfied: ChimeraX-Arrays~=1.0.0 in c:\program |
41 | | files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (1.0) |
42 | | Requirement already satisfied: ChimeraX-AtomicLibrary~=3.1.0 in c:\program |
43 | | files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (3.1.3) |
44 | | Requirement already satisfied: ChimeraX-Core~=1.2.0 in c:\program |
45 | | files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (1.2.5) |
46 | | Requirement already satisfied: ChimeraX-Geometry~=1.0 in c:\program |
47 | | files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX- |
48 | | ISOLDE==1.2.2) (1.1) Requirement already satisfied: ChimeraX- |
49 | | ConnectStructure~=2.0 in c:\program files\chimerax\bin\lib\site-packages (from |
50 | | ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.0) Requirement already |
51 | | satisfied: ChimeraX-Nucleotides~=2.0 in c:\program |
52 | | files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX- |
53 | | ISOLDE==1.2.2) (2.0.1) Requirement already satisfied: ChimeraX-mmCIF~=2.0 in |
54 | | c:\program files\chimerax\bin\lib\site-packages (from ChimeraX- |
55 | | Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.3) Requirement already satisfied: |
56 | | ChimeraX-Graphics~=1.0 in c:\program files\chimerax\bin\lib\site-packages |
57 | | (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0) Requirement |
58 | | already satisfied: ChimeraX-PDB~=2.0 in c:\program |
59 | | files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX- |
60 | | ISOLDE==1.2.2) (2.4.1) Requirement already satisfied: ChimeraX- |
61 | | AtomSearchLibrary~=1.0 in c:\program files\chimerax\bin\lib\site-packages |
62 | | (from ChimeraX-ConnectStructure~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX- |
63 | | ISOLDE==1.2.2) (1.0) Requirement already satisfied: ChimeraX-PDBLibrary~=1.0 |
64 | | in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX- |
65 | | mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0.1) |
66 | | Requirement already satisfied: ChimeraX-SaveCommand~=1.0 in c:\program |
67 | | files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX- |
68 | | Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.4) Requirement already satisfied: |
69 | | ChimeraX-OpenCommand~=1.0 in c:\program files\chimerax\bin\lib\site-packages |
70 | | (from ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) |
71 | | (1.5) Requirement already satisfied: ChimeraX-DataFormats~=1.0 in c:\program |
72 | | files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX- |
73 | | Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.1) Requirement already satisfied: |
74 | | ChimeraX-IO~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from |
75 | | ChimeraX-DataFormats~=1.0->ChimeraX-mmCIF~=2.0->ChimeraX- |
76 | | Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0.1) Requirement already satisfied: |
77 | | ChimeraX-Surface~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from |
78 | | ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) |
79 | | (1.0) Requirement already satisfied: ChimeraX-UI~=1.0 in |
80 | | c:\users\dell\appdata\local\ucsf\chimerax\1.2\site-packages (from ChimeraX- |
81 | | Nucleotides~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.2.1) |
82 | | INFO: pip is looking at multiple versions of chimerax-pdblibrary to determine |
83 | | which version is compatible with other requirements. This could take a while. |
84 | | INFO: pip is looking at multiple versions of chimerax-pdb to determine which |
85 | | version is compatible with other requirements. This could take a while. INFO: |
86 | | pip is looking at multiple versions of chimerax-opencommand to determine which |
87 | | version is compatible with other requirements. This could take a while. INFO: |
88 | | pip is looking at multiple versions of chimerax-nucleotides to determine which |
89 | | version is compatible with other requirements. This could take a while. INFO: |
90 | | pip is looking at multiple versions of chimerax-io to determine which version |
91 | | is compatible with other requirements. This could take a while. INFO: pip is |
92 | | looking at multiple versions of chimerax-dataformats to determine which |
93 | | version is compatible with other requirements. This could take a while. INFO: |
94 | | pip is looking at multiple versions of chimerax-mmcif to determine which |
95 | | version is compatible with other requirements. This could take a while. INFO: |
96 | | pip is looking at multiple versions of chimerax-graphics to determine which |
97 | | version is compatible with other requirements. This could take a while. INFO: |
98 | | pip is looking at multiple versions of chimerax-geometry to determine which |
99 | | version is compatible with other requirements. This could take a while. INFO: |
100 | | pip is looking at multiple versions of chimerax-core to determine which |
101 | | version is compatible with other requirements. This could take a while. INFO: |
102 | | pip is looking at multiple versions of chimerax-atomsearchlibrary to determine |
103 | | which version is compatible with other requirements. This could take a while. |
104 | | INFO: pip is looking at multiple versions of chimerax-connectstructure to |
105 | | determine which version is compatible with other requirements. This could take |
106 | | a while. INFO: pip is looking at multiple versions of <Python from Requires- |
107 | | Python> to determine which version is compatible with other requirements. This |
108 | | could take a while. INFO: pip is looking at multiple versions of chimerax- |
109 | | clipper to determine which version is compatible with other requirements. This |
110 | | could take a while. INFO: pip is looking at multiple versions of chimerax- |
111 | | atomiclibrary to determine which version is compatible with other |
112 | | requirements. This could take a while. INFO: pip is looking at multiple |
113 | | versions of chimerax-atomic to determine which version is compatible with |
114 | | other requirements. This could take a while. INFO: pip is looking at multiple |
115 | | versions of chimerax-arrays to determine which version is compatible with |
116 | | other requirements. This could take a while. INFO: pip is looking at multiple |
117 | | versions of chimerax-isolde to determine which version is compatible with |
118 | | other requirements. This could take a while. The conflict is caused by: |
119 | | chimerax-nucleotides 2.0.1 depends on ChimeraX-UI~=1.0 chimerax-opencommand |
120 | | 1.5 depends on ChimeraX-UI~=1.0 chimerax-savecommand 1.4 depends on ChimeraX- |
121 | | UI~=1.4 To fix this you could try to: 1\. loosen the range of package versions |
122 | | you've specified 2\. remove package versions to allow pip attempt to solve the |
123 | | dependency conflict ERROR: Cannot install chimerax-nucleotides==2.0.1, |
124 | | chimerax-opencommand==1.5 and chimerax-savecommand==1.4 because these package |
125 | | versions have conflicting dependencies. ERROR: ResolutionImpossible: for help |
126 | | visit https://pip.pypa.io/en/latest/user_guide/#fixing-conflicting- |
127 | | dependencies WARNING: You are using pip version 21.0.1; however, version |
128 | | 21.2.4 is available. You should consider upgrading via the 'C:\Program |
129 | | Files\ChimeraX\bin\ChimeraX.exe -m pip install --upgrade pip' command. |
| 33 | Looking in indexes: https://pypi.org/simple, https://cxtoolshed.rbvi.ucsf.edu/pypi/ |
| 34 | Requirement already satisfied: |
| 35 | ChimeraX-ISOLDE==1.2.2 in c:\users\dell\appdata\local\ucsf\chimerax\1.2\site-packages (1.2.2) |
| 36 | Requirement already satisfied: ChimeraX-Atomic~=1.13.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (1.13.2) |
| 37 | Collecting ChimeraX-Clipper~=0.16.0 Using cached https://cxtoolshed.rbvi.ucsf.edu/media/chimeraxclipper/releases/0.16.0/ChimeraX_Clipper-0.16.0-cp38-cp38-win_amd64.whl (22.9 MB) |
| 38 | Requirement already satisfied: ChimeraX-Arrays~=1.0.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (1.0) |
| 39 | Requirement already satisfied: ChimeraX-AtomicLibrary~=3.1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (3.1.3) |
| 40 | Requirement already satisfied: ChimeraX-Core~=1.2.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ISOLDE==1.2.2) (1.2.5) |
| 41 | Requirement already satisfied: ChimeraX-Geometry~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.1) |
| 42 | Requirement already satisfied: ChimeraX-ConnectStructure~=2.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.0) |
| 43 | Requirement already satisfied: ChimeraX-Nucleotides~=2.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.0.1) |
| 44 | Requirement already satisfied: ChimeraX-mmCIF~=2.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.3) |
| 45 | Requirement already satisfied: ChimeraX-Graphics~=1.0 in c:\program files\chimerax\bin\lib\site-packages(from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0) |
| 46 | Requirement already satisfied: ChimeraX-PDB~=2.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (2.4.1) |
| 47 | Requirement already satisfied: ChimeraX-AtomSearchLibrary~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-ConnectStructure~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX- |
| 48 | ISOLDE==1.2.2) (1.0) |
| 49 | Requirement already satisfied: ChimeraX-PDBLibrary~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0.1) |
| 50 | Requirement already satisfied: ChimeraX-SaveCommand~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.4) Requirement already satisfied: ChimeraX-OpenCommand~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.5) |
| 51 | Requirement already satisfied: ChimeraX-DataFormats~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.1) Requirement already satisfied: ChimeraX-IO~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-DataFormats~=1.0->ChimeraX-mmCIF~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0.1) |
| 52 | Requirement already satisfied: ChimeraX-Surface~=1.0 in c:\program files\chimerax\bin\lib\site-packages (from ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.0) |
| 53 | Requirement already satisfied: ChimeraX-UI~=1.0 in c:\users\dell\appdata\local\ucsf\chimerax\1.2\site-packages (from ChimeraX-Nucleotides~=2.0->ChimeraX-Atomic~=1.13.0->ChimeraX-ISOLDE==1.2.2) (1.2.1) |
| 54 | INFO: pip is looking at multiple versions of chimerax-pdblibrary to determine which version is compatible with other requirements. This could take a while. |
| 55 | INFO: pip is looking at multiple versions of chimerax-pdb to determine which version is compatible with other requirements. This could take a while. |
| 56 | INFO: pip is looking at multiple versions of chimerax-opencommand to determine which version is compatible with other requirements. This could take a while. |
| 57 | INFO: pip is looking at multiple versions of chimerax-nucleotides to determine which version is compatible with other requirements. This could take a while. |
| 58 | INFO: pip is looking at multiple versions of chimerax-io to determine which version is compatible with other requirements. This could take a while. |
| 59 | INFO: pip is looking at multiple versions of chimerax-dataformats to determine which version is compatible with other requirements. This could take a while. |
| 60 | INFO: pip is looking at multiple versions of chimerax-mmcif to determine which version is compatible with other requirements. This could take a while. |
| 61 | INFO: pip is looking at multiple versions of chimerax-graphics to determine which version is compatible with other requirements. This could take a while. |
| 62 | INFO:pip is looking at multiple versions of chimerax-geometry to determine which version is compatible with other requirements. This could take a while. |
| 63 | INFO: pip is looking at multiple versions of chimerax-core to determine which version is compatible with other requirements. This could take a while. |
| 64 | INFO: pip is looking at multiple versions of chimerax-atomsearchlibrary to determine which version is compatible with other requirements. This could take a while. |
| 65 | INFO: pip is looking at multiple versions of chimerax-connectstructure to determine which version is compatible with other requirements. This could take a while. |
| 66 | INFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while. INFO: pip is looking at multiple versions of chimerax-clipper to determine which version is compatible with other requirements. This |
| 67 | could take a while. |
| 68 | INFO: pip is looking at multiple versions of chimerax-atomiclibrary to determine which version is compatible with other requirements. This could take a while. |
| 69 | INFO: pip is looking at multiple versions of chimerax-atomic to determine which version is compatible with other requirements. This could take a while. |
| 70 | INFO: pip is looking at multiple versions of chimerax-arrays to determine which version is compatible with other requirements. This could take a while. |
| 71 | INFO: pip is looking at multiple versions of chimerax-isolde to determine which version is compatible with other requirements. This could take a while. The conflict is caused by: chimerax-nucleotides 2.0.1 depends on ChimeraX-UI~=1.0 chimerax-opencommand 1.5 depends on ChimeraX-UI~=1.0 chimerax-savecommand 1.4 depends on ChimeraX-UI~=1.4 To fix this you could try to: 1\. loosen the range of package versions you've specified 2\. remove package versions to allow pip attempt to solve the |
| 72 | dependency conflict |
| 73 | ERROR: Cannot install chimerax-nucleotides==2.0.1, chimerax-opencommand==1.5 and chimerax-savecommand==1.4 because these package versions have conflicting dependencies. |
| 74 | ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/user_guide/#fixing-conflicting-dependencies |
| 75 | WARNING: You are using pip version 21.0.1; however, version 21.2.4 is available. You should consider upgrading via the 'C:\Program Files\ChimeraX\bin\ChimeraX.exe -m pip install --upgrade pip' command. |