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Opened 2 days ago
Last modified 40 hours ago
#20575 feedback defect
ChimeraX bug report submission — at Initial Version
| Reported by: | Owned by: | ||
|---|---|---|---|
| Priority: | normal | Milestone: | |
| Component: | Core | Version: | |
| Keywords: | Cc: | ||
| Blocked By: | Blocking: | ||
| Notify when closed: | Platform: | all | |
| Project: | ChimeraX |
Description
The following bug report has been submitted:
Platform: Linux-5.14.0-427.20.1.el9_4.x86_64-x86_64-with-glibc2.34
ChimeraX Version: 1.9 (2024-12-11 19:11:19 UTC)
Description
Replace this text with list of actions that caused this problem to occur
Log:
UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Publication/Figures/Updated/male_mutant_class45_pp_zoom.cxs
> format session
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #2, grid size 480,480,480, pixel 0.824, shown at level 0.007, step 1,
values float32
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush_EMReady.mrc
as #3, grid size 480,480,480, pixel 0.824, shown at level 2.44, step 1, values
float32
Opened
rps9_mmt_FR_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #4, grid size 480,480,480, pixel 0.824, shown at level 0.00354, step 1,
values float32
Log from Mon Jun 29 19:06:51 2026UCSF ChimeraX version: 1.9 (2024-12-11)
© 2016-2024 Regents of the University of California. All rights reserved.
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Publication/Figures/mmt_class45_pp_zoom.cxs
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #2, grid size 480,480,480, pixel 0.824, shown at level 0.007, step 1,
values float32
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush_EMReady.mrc
as #3, grid size 480,480,480, pixel 0.824, shown at level 2.44, step 1, values
float32
Opened
rps9_mmt_FR_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #4, grid size 480,480,480, pixel 0.824, shown at level 0.005, step 1,
values float32
Log from Sun Jun 7 07:46:49 2026UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Publication/Figures/Mmt_class45_mR_zoom.cxs
> format session
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #2, grid size 480,480,480, pixel 0.824, shown at level 0.007, step 1,
values float32
Opened
rps9_mmt_multibody_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush_EMReady.mrc
as #3, grid size 480,480,480, pixel 0.824, shown at level 2.44, step 1, values
float32
Opened
rps9_mmt_FR_combined_aligned2shiny_with_antiibiotic_p824_class45_with_blush.mrc
as #4, grid size 480,480,480, pixel 0.824, shown at level 0.005, step 1,
values float32
Log from Sat Jun 6 17:01:05 2026UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/RPS9_RPS2_interaction.cxs
> format session
Log from Wed May 6 15:43:28 2026UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/eB14.cxs
> format session
Log from Wed May 6 14:47:26 2026 Startup Messages
---
warnings | Replacing fetcher for 'ngff' and format OME-Zarr from OME-Zarr bundle with that from OME-Zarr bundle
Replacing fetcher for 'ngff' and format OME-Zarr from OME-Zarr bundle with
that from OME-Zarr bundle
Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with
that from NMRSTAR bundle
Registration file '/yonath_group/disha/.local/share/ChimeraX/registration' has
expired
UCSF ChimeraX version: 1.7.1 (2024-01-23)
© 2016-2023 Regents of the University of California. All rights reserved.
How to cite UCSF ChimeraX
Registration file '/yonath_group/disha/.local/share/ChimeraX/registration' has
expired
> open /yonath_group/disha/Downloads/s41467-026-72263-5_reference.pdf
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_02_final_volume.mrc
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_01_final_volume.mrc
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_00_final_volume.mrc
> open
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_00_final_volume.mrc
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_01_final_volume.mrc
> /yonath_group/disha/Downloads/cryosparc_P3_J40_class_02_final_volume.mrc
Opened cryosparc_P3_J40_class_00_final_volume.mrc as #1.1, grid size
256,256,256, pixel 0.731, shown at level 0.00366, step 1, values float32
Opened cryosparc_P3_J40_class_01_final_volume.mrc as #1.2, grid size
256,256,256, pixel 0.731, shown at level 0.00366, step 1, values float32
Opened cryosparc_P3_J40_class_02_final_volume.mrc as #1.3, grid size
256,256,256, pixel 0.731, shown at level 0.00369, step 1, values float32
> set bgColor white
> volume all level 0.05
> ui tool show "Fit in Map"
> fitmap #1.1 inMap #1.3
Fit map cryosparc_P3_J40_class_00_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35056 points
correlation = 0.6449, correlation about mean = 0.1501, overlap = 119.1
steps = 164, shift = 2.35, angle = 28.7 degrees
Position of cryosparc_P3_J40_class_00_final_volume.mrc (#1.1) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
0.87782988 -0.22114441 0.42486450 -7.79840643
0.23870333 0.97101559 0.01222450 -19.06248038
-0.41525343 0.09068554 0.90517441 39.63665517
Axis 0.08164993 0.87426275 0.47853728
Axis point 83.76760402 0.00000000 42.76251086
Rotation angle (degrees) 28.71624820
Shift along axis 1.66526139
> fitmap #1.2 inMap #1.3
Fit map cryosparc_P3_J40_class_01_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35125 points
correlation = 0.9559, correlation about mean = 0.7389, overlap = 264.9
steps = 72, shift = 0.261, angle = 4.06 degrees
Position of cryosparc_P3_J40_class_01_final_volume.mrc (#1.2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
0.99997162 0.00354537 0.00664707 -1.08978508
-0.00400425 0.99751487 0.07034236 -6.23278325
-0.00638116 -0.07036698 0.99750076 7.55442473
Axis -0.99432291 0.09206407 -0.05334939
Axis point 0.00000000 104.15574884 92.42584401
Rotation angle (degrees) 4.05743145
Shift along axis 0.10675892
> select add #1.1
2 models selected
> ui mousemode right "rotate selected models"
> view matrix models
> #1.1,0.34637,0.40388,-0.84671,102.23,0.75805,0.4112,0.50624,-60.691,0.55262,-0.81719,-0.16373,137.19
> view matrix models
> #1.1,-0.82303,0.42439,-0.37752,163.27,0.087289,0.75125,0.65422,-45.124,0.56125,0.50549,-0.65534,58.4
> view matrix models
> #1.1,0.16006,0.90745,0.38848,-44.685,0.9816,-0.18784,0.034361,19.712,0.10415,0.37583,-0.92082,137.6
> fitmap #1.2 inMap #1.3
Fit map cryosparc_P3_J40_class_01_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35125 points
correlation = 0.956, correlation about mean = 0.739, overlap = 264.9
steps = 44, shift = 0.0122, angle = 0.021 degrees
Position of cryosparc_P3_J40_class_01_final_volume.mrc (#1.2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
0.99997180 0.00381878 0.00646615 -1.10501483
-0.00426526 0.99750229 0.07050520 -6.23296320
-0.00618076 -0.07053079 0.99749045 7.55350726
Axis -0.99438443 0.08916797 -0.05699713
Axis point 0.00000000 103.90454969 92.22749033
Rotation angle (degrees) 4.06661426
Shift along axis 0.11250065
> fitmap #1.1 inMap #1.3
Fit map cryosparc_P3_J40_class_00_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35056 points
correlation = 0.6062, correlation about mean = 0.05805, overlap = 98.98
steps = 120, shift = 4.34, angle = 11.6 degrees
Position of cryosparc_P3_J40_class_00_final_volume.mrc (#1.1) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.00925617 0.88391864 0.46754910 -30.72481499
0.98280436 -0.07819004 0.16727792 -4.44726936
0.18441775 0.46105765 -0.86799536 115.11063145
Axis 0.69977656 0.67441235 0.23554352
Axis point -0.00000000 3.89905055 62.25532788
Rotation angle (degrees) 167.88294144
Shift along axis 2.61376440
> view matrix models
> #1.1,0.68544,-0.70689,0.17458,82.859,-0.49785,-0.62996,-0.59607,255.36,0.53134,0.32165,-0.78372,88.443
> view matrix models
> #1.1,0.51693,-0.81904,0.24892,101.85,-0.76929,-0.57202,-0.28459,245.4,0.37547,-0.044375,-0.92577,150.59
> fitmap #1.1 inMap #1.3
Fit map cryosparc_P3_J40_class_00_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35056 points
correlation = 0.61, correlation about mean = 0.06287, overlap = 109
steps = 132, shift = 3.44, angle = 15.1 degrees
Position of cryosparc_P3_J40_class_00_final_volume.mrc (#1.1) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
0.50950593 -0.83280100 0.21643983 107.82871743
-0.84771695 -0.52895848 -0.03973549 226.28565170
0.14757944 -0.16323425 -0.97548701 184.03544613
Axis -0.86858638 0.48430609 -0.10490620
Axis point 0.00000000 146.96761472 80.83647081
Rotation angle (degrees) 175.92330015
Shift along axis -3.37349560
> view matrix models
> #1.1,0.93284,0.082228,-0.35079,36.484,0.083264,-0.99645,-0.012157,182.26,-0.35054,-0.017867,-0.93638,212.36
> fitmap #1.1 inMap #1.3
Fit map cryosparc_P3_J40_class_00_final_volume.mrc in map
cryosparc_P3_J40_class_02_final_volume.mrc using 35056 points
correlation = 0.9625, correlation about mean = 0.7776, overlap = 265.7
steps = 128, shift = 7.38, angle = 21.7 degrees
Position of cryosparc_P3_J40_class_00_final_volume.mrc (#1.1) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
0.99989915 0.00835343 0.01148545 -1.94781047
0.00801703 -0.99954641 0.02902957 183.51184811
0.01172273 -0.02893456 -0.99951257 188.53958835
Axis -0.99997478 -0.00409357 -0.00580339
Axis point 0.00000000 93.12633770 92.94545880
Rotation angle (degrees) 178.33917564
Shift along axis 0.10237446
> select clear
> open
> /yonath_group/disha/l27_prp/fold_2026_05_04_prp_bl27_sumo/fold_2026_05_04_prp_bl27_sumo_model_1.cif
Chain information for fold_2026_05_04_prp_bl27_sumo_model_1.cif #2
---
Chain | Description
A | .
B | .
> select add #2
2425 atoms, 2462 bonds, 311 residues, 1 model selected
> view matrix models
> #2,0.98886,-0.10734,-0.10309,0.47945,0.12117,0.98287,0.13888,3.0604,0.086413,-0.14983,0.98493,3.1436
> view matrix models
> #2,0.9648,0.22256,0.14009,-2.4088,-0.17886,0.94585,-0.27088,-3.9626,-0.19279,0.23629,0.95237,-6.3294
> view matrix models
> #2,0.86895,-0.28675,-0.40337,-1.1778,0.44947,0.7984,0.40068,12.316,0.20715,-0.52947,0.82265,8.7256
> ui mousemode right "translate selected models"
> view matrix models
> #2,0.86895,-0.28675,-0.40337,62.908,0.44947,0.7984,0.40068,45.001,0.20715,-0.52947,0.82265,116.8
> view matrix models
> #2,0.86895,-0.28675,-0.40337,56.809,0.44947,0.7984,0.40068,66.857,0.20715,-0.52947,0.82265,109.52
> ui mousemode right "rotate selected models"
> view matrix models
> #2,0.94884,-0.30393,-0.085607,56.906,0.30605,0.81853,0.48614,61.113,-0.07768,-0.48747,0.86968,99.15
> view matrix models
> #2,0.87824,-0.38195,-0.28775,56.148,0.47602,0.75581,0.44962,67.368,0.045751,-0.53185,0.8456,103.67
> view matrix models
> #2,-0.28013,-0.31922,-0.90533,20.855,-0.075541,0.9475,-0.31071,54.532,0.95698,-0.018651,-0.28954,145.23
> view matrix models
> #2,-0.88389,-0.34678,0.31382,-10.627,-0.44187,0.83906,-0.31738,41.762,-0.15325,-0.4192,-0.89487,111.49
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.88389,-0.34678,0.31382,-3.4731,-0.44187,0.83906,-0.31738,57.391,-0.15325,-0.4192,-0.89487,63.658
> view matrix models
> #2,-0.88389,-0.34678,0.31382,93.456,-0.44187,0.83906,-0.31738,83.55,-0.15325,-0.4192,-0.89487,96.479
> view matrix models
> #2,-0.88389,-0.34678,0.31382,92.169,-0.44187,0.83906,-0.31738,92.019,-0.15325,-0.4192,-0.89487,93.85
> view matrix models
> #2,-0.88389,-0.34678,0.31382,92.232,-0.44187,0.83906,-0.31738,93.623,-0.15325,-0.4192,-0.89487,90.531
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02757, steps = 356
shifted from previous position = 5.78
rotated from previous position = 38.8 degrees
atoms outside contour = 1891, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.99574464 -0.01694962 -0.09058320 97.71573285
-0.01990742 0.99929440 0.03184965 97.30905474
0.08997944 0.03351739 -0.99537947 90.77754130
Axis 0.00923475 -0.99982322 -0.01637810
Axis point 47.28972743 0.00000000 46.82298226
Rotation angle (degrees) 174.81929023
Shift along axis -97.87623616
> select clear
> surface dust #1.1 size 7.31
> surface dust #1.2 size 7.31
> surface dust #1.3 size 7.31
> color #2 #aa0000ff
> select clear
> view
> hide #!1.2 models
> hide #!1.3 models
> transparency #1.1.1 50
> select add #2
2425 atoms, 2462 bonds, 311 residues, 1 model selected
> view matrix models
> #2,-0.99574,-0.01695,-0.090583,96.273,-0.019907,0.99929,0.03185,96.567,0.089979,0.033517,-0.99538,89.081
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.82865,0.25256,-0.49955,105.61,0.33582,0.93829,-0.082681,109.99,0.44784,-0.23627,-0.86233,100.46
> view matrix models
> #2,-0.70461,0.24606,-0.66557,111.36,0.40204,0.91132,-0.088706,112.35,0.58472,-0.33009,-0.74104,104.22
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02694, steps = 392
shifted from previous position = 25.2
rotated from previous position = 18.7 degrees
atoms outside contour = 1900, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.84118506 -0.02025070 -0.54036802 99.43179720
0.14453034 0.95452347 -0.26076030 94.76878791
0.52107453 -0.29744724 -0.80000404 91.04372650
Axis -0.03413427 -0.98758756 0.15331560
Axis point 32.76138018 0.00000000 67.13559788
Rotation angle (degrees) 147.49374883
Shift along axis -83.02808440
> view matrix models
> #2,-0.70242,0.080232,-0.70722,105.71,0.37973,0.88264,-0.27702,103.13,0.602,-0.46314,-0.65046,92.597
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02694, steps = 292
shifted from previous position = 10.8
rotated from previous position = 17 degrees
atoms outside contour = 1899, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.84118124 -0.02022797 -0.54037481 99.44076112
0.14454211 0.95452876 -0.26073438 94.77099746
0.52107743 -0.29743179 -0.80000790 91.03879311
Axis -0.03414374 -0.98758899 0.15330423
Axis point 32.76600101 0.00000000 67.13403560
Rotation angle (degrees) 147.49346866
Shift along axis -83.03344174
> view matrix models
> #2,-0.98745,-0.14134,-0.070505,90.325,-0.091741,0.8766,-0.47239,88.295,0.12857,-0.45999,-0.87857,77.96
> view matrix models
> #2,-0.95778,-0.25795,0.127,89.68,-0.28386,0.7781,-0.56035,82.312,0.045724,-0.57274,-0.81846,74.544
> view matrix models
> #2,-0.9999,0.011175,-0.0086882,89.373,0.01387,0.89597,-0.4439,91.75,0.002824,-0.44397,-0.89604,73.709
> view matrix models
> #2,-0.96055,0.27567,-0.036773,91.004,0.27354,0.9126,-0.30388,99.65,-0.050211,-0.30195,-0.952,72.336
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02744, steps = 380
shifted from previous position = 20.9
rotated from previous position = 20.3 degrees
atoms outside contour = 1893, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.99500485 0.01659236 -0.09843797 96.99629638
0.02609409 0.99503560 -0.09603774 98.76808659
0.09635579 -0.09812666 -0.99049822 92.63436358
Axis -0.01071044 -0.99875516 0.04871770
Axis point 45.58851434 0.00000000 51.07444758
Rotation angle (degrees) 174.40372042
Shift along axis -95.17107609
> view matrix models
> #2,-0.99754,-0.069642,0.0081608,95.998,-0.066218,0.89737,-0.43629,98.421,0.023061,-0.43576,-0.89977,89.28
> view matrix models
> #2,-0.99371,-0.084029,-0.074044,96.829,-0.040969,0.88803,-0.45796,99.488,0.10424,-0.45204,-0.88589,92.002
> view matrix models
> #2,-0.98226,-0.15638,-0.10347,97.475,-0.092194,0.88326,-0.45973,97.71,0.16328,-0.44204,-0.88201,94.036
> view matrix models
> #2,-0.87715,-0.46738,-0.11027,101.19,-0.37012,0.8043,-0.46488,88.023,0.30596,-0.36696,-0.87848,99.004
> view matrix models
> #2,-0.84926,-0.50557,-0.1522,102.52,-0.38649,0.79167,-0.47316,87.519,0.35971,-0.34301,-0.86773,100.79
> view matrix models
> #2,-0.80347,-0.55655,-0.21141,104.63,-0.40719,0.77277,-0.48685,86.91,0.43433,-0.30508,-0.84751,103.24
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02628, steps = 228
shifted from previous position = 18.5
rotated from previous position = 4.14 degrees
atoms outside contour = 1898, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.82778441 -0.50416113 -0.24615956 93.99953697
-0.36350330 0.81615181 -0.44917878 95.38951689
0.42736205 -0.28234338 -0.85886197 90.92664653
Axis 0.23564650 -0.95131496 0.19867202
Axis point 49.10716713 0.00000000 65.60580127
Rotation angle (degrees) 159.26813307
Shift along axis -50.53023180
> volume #1.1 level 0.01664
> view matrix models
> #2,-0.68481,-0.60968,-0.39915,100.3,-0.39318,0.77031,-0.50203,94.797,0.61355,-0.18686,-0.76723,96.67
> view matrix models
> #2,-0.62625,-0.34366,-0.69979,104.91,0.057663,0.87473,-0.48117,110.4,0.77749,-0.34169,-0.52798,100.37
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.2446,-0.69191,-0.67928,118.08,-0.011665,0.70261,-0.71148,109.92,0.96955,-0.1661,-0.17993,104.14
> view matrix models
> #2,-0.32535,-0.75815,-0.56512,114.28,0.14522,0.55048,-0.82212,116.34,0.93438,-0.34954,-0.069005,101.96
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.32535,-0.75815,-0.56512,109.42,0.14522,0.55048,-0.82212,98.792,0.93438,-0.34954,-0.069005,84.984
> view matrix models
> #2,-0.32535,-0.75815,-0.56512,102.38,0.14522,0.55048,-0.82212,94.801,0.93438,-0.34954,-0.069005,91.297
> view matrix models
> #2,-0.32535,-0.75815,-0.56512,95.833,0.14522,0.55048,-0.82212,97.752,0.93438,-0.34954,-0.069005,97.123
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02325, steps = 292
shifted from previous position = 3.61
rotated from previous position = 20.7 degrees
atoms outside contour = 1983, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.52234046 -0.80563014 -0.27950047 92.88036915
0.08832317 0.27489248 -0.95740960 95.51195908
0.84815061 -0.52478014 -0.07243165 98.52941973
Axis 0.28791350 -0.75044813 0.59492303
Axis point 37.50368297 0.00000000 113.94512461
Rotation angle (degrees) 131.29528309
Shift along axis 13.68216175
> view matrix models
> #2,-0.52234,-0.80563,-0.2795,89.731,0.088323,0.27489,-0.95741,91.377,0.84815,-0.52478,-0.072432,93.392
> view matrix models
> #2,-0.52234,-0.80563,-0.2795,83.968,0.088323,0.27489,-0.95741,90.304,0.84815,-0.52478,-0.072432,91.223
> view matrix models
> #2,-0.52234,-0.80563,-0.2795,89.426,0.088323,0.27489,-0.95741,86.236,0.84815,-0.52478,-0.072432,95.916
> view matrix models
> #2,-0.52234,-0.80563,-0.2795,93.148,0.088323,0.27489,-0.95741,92.106,0.84815,-0.52478,-0.072432,98.576
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02325, steps = 108
shifted from previous position = 3.41
rotated from previous position = 0.0104 degrees
atoms outside contour = 1982, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.52227684 -0.80561275 -0.27966944 92.87857189
0.08842675 0.27502274 -0.95736263 95.50447843
0.84817899 -0.52473859 -0.07240029 98.53972827
Axis 0.28787200 -0.75048068 0.59490207
Axis point 37.49085726 0.00000000 113.94796419
Rotation angle (degrees) 131.28669537
Shift along axis 13.68436233
> view matrix models
> #2,-0.52228,-0.80561,-0.27967,92.215,0.088427,0.27502,-0.95736,90.521,0.84818,-0.52474,-0.0724,96.05
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.47057,-0.80412,0.36325,88.566,-0.025689,-0.39902,-0.91658,86.142,0.88199,-0.44065,0.16711,95.205
> view matrix models
> #2,-0.46449,-0.78188,0.41584,88.333,-0.032507,-0.4542,-0.89031,85.678,0.88498,-0.42705,0.18555,95.154
> fitmap #2 inMap #1.3
Fit molecule fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) to map
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) using 2425 atoms
average map value = 0.02234, steps = 260
shifted from previous position = 5.81
rotated from previous position = 9.8 degrees
atoms outside contour = 1981, contour level = 0.05
Position of fold_2026_05_04_prp_bl27_sumo_model_1.cif (#2) relative to
cryosparc_P3_J40_class_02_final_volume.mrc (#1.3) coordinates:
Matrix rotation and translation
-0.33334193 -0.87320463 0.35552332 82.77931495
0.00629543 -0.37914375 -0.92531637 87.23479358
0.94278498 -0.30620857 0.13188170 93.43146572
Axis 0.50521469 -0.47922708 0.71770434
Axis point -19.95806287 86.46812416 0.00000000
Rotation angle (degrees) 142.21374164
Shift along axis 67.07221909
> view matrix models
> #2,-0.25863,-0.93633,0.23747,86.393,0.56967,-0.34638,-0.74532,105.42,0.78012,-0.057484,0.62298,83.583
> ui mousemode right "translate selected models"
> view matrix models
> #2,-0.25863,-0.93633,0.23747,101.08,0.56967,-0.34638,-0.74532,102.04,0.78012,-0.057484,0.62298,90.274
> view matrix models
> #2,-0.25863,-0.93633,0.23747,98.088,0.56967,-0.34638,-0.74532,83.859,0.78012,-0.057484,0.62298,108.91
> view matrix models
> #2,-0.25863,-0.93633,0.23747,86.531,0.56967,-0.34638,-0.74532,83.855,0.78012,-0.057484,0.62298,105
> view matrix models
> #2,-0.25863,-0.93633,0.23747,85.85,0.56967,-0.34638,-0.74532,84.01,0.78012,-0.057484,0.62298,103.87
> view matrix models
> #2,-0.25863,-0.93633,0.23747,82.239,0.56967,-0.34638,-0.74532,84.115,0.78012,-0.057484,0.62298,105.93
> ui mousemode right "rotate selected models"
> view matrix models
> #2,-0.014861,-0.87003,0.49277,88.606,0.336,-0.46851,-0.81707,76.539,0.94174,0.15343,0.29929,114.34
> view matrix models
> #2,0.36828,-0.85005,0.37655,103,-0.071113,-0.42958,-0.90022,63,0.92699,0.30476,-0.21866,118.23
> view matrix models
> #2,0.35067,-0.9005,0.25716,103.4,-0.11978,-0.31547,-0.94134,61.652,0.92881,0.29929,-0.21849,118.29
> ui mousemode right "translate selected models"
> view matrix models
> #2,0.35067,-0.9005,0.25716,80.058,-0.11978,-0.31547,-0.94134,80.579,0.92881,0.29929,-0.21849,110.69
> view matrix models
> #2,0.35067,-0.9005,0.25716,76.841,-0.11978,-0.31547,-0.94134,84.232,0.92881,0.29929,-0.21849,110.63
> view matrix models
> #2,0.35067,-0.9005,0.25716,78.636,-0.11978,-0.31547,-0.94134,86.881,0.92881,0.29929,-0.21849,105.26
> view matrix models
> #2,0.35067,-0.9005,0.25716,78.673,-0.11978,-0.31547,-0.94134,89.848,0.92881,0.29929,-0.21849,104.69
> close session
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/0-coot-
> history.py
Traceback (most recent call last):
File
"/yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/0-coot-
history.py", line 1, in <module>
filter_fileselection_filenames_state ()
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
NameError: name 'filter_fileselection_filenames_state' is not defined
Error opening python file
/yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/0-coot-
history.py
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/Class_45/Models/Phenix/RealSpaceRefine_13/Male_mutant_class45_real_space_refined_013_new.cif-
> coot-2.pdb
Chain information for Male_mutant_class45_real_space_refined_013_new.cif-
coot-2.pdb #1
---
Chain | Description
At | No description available
B | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lb | No description available
Lc | No description available
Ld | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Ll | No description available
Lm | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
Pt | No description available
S2 | No description available
SA | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SY | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
pp | No description available
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/Class2/models/Phenix/RealSpaceRefine_9/Male_mutant_class2_real_space_refined_009.cif
Summary of feedback from opening
/yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/Class2/models/Phenix/RealSpaceRefine_9/Male_mutant_class2_real_space_refined_009.cif
---
warnings | Skipping chem_comp category: Missing column 'type' near line 8831
Missing entity information. Treating each chain as a separate entity.
Invalid residue range for struct_conf "1": invalid chain "LA", near line 234
Invalid residue range for struct_conf "2": invalid chain "LA", near line 235
Invalid residue range for struct_conf "3": invalid chain "LA", near line 236
Invalid residue range for struct_conf "4": invalid chain "LA", near line 237
Invalid residue range for struct_conf "5": invalid chain "LA", near line 238
356 messages similar to the above omitted
Invalid sheet range for struct_sheet_range "1 1": invalid chain "LA", near
line 8275
Invalid sheet range for struct_sheet_range "1 2": invalid chain "LA", near
line 8276
Invalid sheet range for struct_sheet_range "1 3": invalid chain "LA", near
line 8277
Invalid sheet range for struct_sheet_range "1 4": invalid chain "LA", near
line 8278
Invalid sheet range for struct_sheet_range "2 1": invalid chain "LA", near
line 8279
333 messages similar to the above omitted
Atom HO5' is not in the residue template for G /L7:1
Atom HO5' is not in the residue template for U /S2:1
Missing or incomplete sequence information. Inferred polymer connectivity.
Skipping chem_comp category: Missing column 'type' near line 355134
Skipping chem_comp category: Missing column 'type' near line 355400
Skipping chem_comp category: Missing column 'type' near line 355682
Skipping chem_comp category: Missing column 'type' near line 355931
Skipping chem_comp category: Missing column 'type' near line 356183
8 messages similar to the above omitted
Chain information for Male_mutant_class2_real_space_refined_009.cif #2
---
Chain | Description
Et | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lb | No description available
Lc | No description available
Ld | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Ll | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
Pt | No description available
S2 | No description available
SA | No description available
SB | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SY | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class2_blush/models/new_phenix/RealSpaceRefine_13/mwt_class2_real_space_refined_013.cif
Summary of feedback from opening
/yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class2_blush/models/new_phenix/RealSpaceRefine_13/mwt_class2_real_space_refined_013.cif
---
warnings | Skipping chem_comp category: Missing column 'type' near line 8968
Missing entity information. Treating each chain as a separate entity.
Invalid residue range for struct_conf "1": invalid chain "SP", near line 258
Invalid residue range for struct_conf "2": invalid chain "SP", near line 259
Invalid residue range for struct_conf "3": invalid chain "SP", near line 260
Invalid residue range for struct_conf "4": invalid chain "SP", near line 261
Invalid residue range for struct_conf "5": invalid chain "SP", near line 262
341 messages similar to the above omitted
Invalid sheet range for struct_sheet_range "1 1": invalid chain "SP", near
line 8401
Invalid sheet range for struct_sheet_range "1 2": invalid chain "SP", near
line 8402
Invalid sheet range for struct_sheet_range "1 3": invalid chain "SP", near
line 8403
Invalid sheet range for struct_sheet_range "2 1": invalid chain "Sc", near
line 8404
Invalid sheet range for struct_sheet_range "2 2": invalid chain "Sc", near
line 8405
337 messages similar to the above omitted
Missing or incomplete sequence information. Inferred polymer connectivity.
Skipping chem_comp category: Missing column 'type' near line 207454
Skipping chem_comp category: Missing column 'type' near line 207746
Skipping chem_comp category: Missing column 'type' near line 207995
Skipping chem_comp category: Missing column 'type' near line 208277
Skipping chem_comp category: Missing column 'type' near line 208540
7 messages similar to the above omitted
Chain information for mwt_class2_real_space_refined_013.cif #3
---
Chain | Description
At Et | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lc | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Lm | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
Pt | No description available
S2 | No description available
SA | No description available
SB | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class3_blush/models/New_phenix/RealSpaceRefine_3/Mwt_class3_real_space_refined_003.cif
Summary of feedback from opening
/yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class3_blush/models/New_phenix/RealSpaceRefine_3/Mwt_class3_real_space_refined_003.cif
---
warnings | Skipping chem_comp category: Missing column 'type' near line 9376
Missing entity information. Treating each chain as a separate entity.
Invalid residue range for struct_conf "1": invalid chain "LA", near line 229
Invalid residue range for struct_conf "2": invalid chain "LA", near line 230
Invalid residue range for struct_conf "3": invalid chain "LA", near line 231
Invalid residue range for struct_conf "4": invalid chain "LA", near line 232
Invalid residue range for struct_conf "5": invalid chain "LA", near line 233
361 messages similar to the above omitted
Invalid sheet range for struct_sheet_range "1 1": invalid chain "LA", near
line 8784
Invalid sheet range for struct_sheet_range "1 2": invalid chain "LA", near
line 8785
Invalid sheet range for struct_sheet_range "1 3": invalid chain "LA", near
line 8786
Invalid sheet range for struct_sheet_range "1 4": invalid chain "LA", near
line 8787
Invalid sheet range for struct_sheet_range "2 1": invalid chain "LA", near
line 8788
350 messages similar to the above omitted
Missing or incomplete sequence information. Inferred polymer connectivity.
Skipping chem_comp category: Missing column 'type' near line 214811
Skipping chem_comp category: Missing column 'type' near line 215103
Skipping chem_comp category: Missing column 'type' near line 215385
Skipping chem_comp category: Missing column 'type' near line 215637
Skipping chem_comp category: Missing column 'type' near line 215664
6 messages similar to the above omitted
Chain information for Mwt_class3_real_space_refined_003.cif #4
---
Chain | Description
At Pt | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lb | No description available
Lc | No description available
Ld | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Ll | No description available
Lm | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
S2 | No description available
SA | No description available
SB | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SY | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
> open 8g5y
8g5y title:
mRNA decoding in human is kinetically and structurally distinct from bacteria
(IC state) [more info...]
Chain information for 8g5y #5
---
Chain | Description | UniProt
5A | eIF5A1 |
L5 | 28S rRNA |
L7 | 5S rRNA |
L8 | 5.8S rRNA |
LA | uL2 |
LB | 60S ribosomal protein L3 | RL3_HUMAN 1-403
LC | 60S ribosomal protein L4 | RL4_HUMAN 1-427
LD | 60S ribosomal protein L5 | RL5_HUMAN 1-297
LE | 60S ribosomal protein L6 | RL6_HUMAN 1-288
LF | 60S ribosomal protein L7 | RL7_HUMAN 1-248
LG | 60S ribosomal protein L7a | RL7A_HUMAN 1-266
LH | 60S ribosomal protein L9 | RL9_HUMAN 1-192
LI | 60S ribosomal protein L10 | RL10_HUMAN 1-214
LJ | 60S ribosomal protein L11 | RL11_HUMAN 1-178
LL | 60S ribosomal protein L13 | RL13_HUMAN 1-211
LM | 60S ribosomal protein L14 | RL14_HUMAN 1-215
LN | 60S ribosomal protein L15 | RL15_HUMAN 1-204
LO | 60S ribosomal protein L13a | RL13A_HUMAN 1-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 1-184
LQ | 60S ribosomal protein L18 | RL18_HUMAN 1-188
LR | 60S ribosomal protein L19 | RL19_HUMAN 1-196
LS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT | 60S ribosomal protein L21 | RL21_HUMAN 1-160
LU | 60S ribosomal protein L22 | RL22_HUMAN 1-128
LV | 60S ribosomal protein L23 | RL23_HUMAN 1-140
LW | 60S ribosomal protein L24 | RL24_HUMAN 1-157
LX | 60S ribosomal protein L23a | RL23A_HUMAN 1-156
LY | 60S ribosomal protein L26 | RL26_HUMAN 1-145
LZ | 60S ribosomal protein L27 | RL27_HUMAN 1-136
La | 60S ribosomal protein L27a | RL27A_HUMAN 1-148
Lb | 60S ribosomal protein L29 | RL29_HUMAN 1-159
Lc | 60S ribosomal protein L30 | RL30_HUMAN 1-115
Ld | 60S ribosomal protein L31 | RL31_HUMAN 1-125
Le | 60S ribosomal protein L32 | RL32_HUMAN 1-135
Lf | 60S ribosomal protein L35a | RL35A_HUMAN 1-110
Lg | 60S ribosomal protein L34 | RL34_HUMAN 1-117
Lh | 60S ribosomal protein L35 | RL35_HUMAN 1-123
Li | 60S ribosomal protein L36 | RL36_HUMAN 1-105
Lj | 60S ribosomal protein L37 | RL37_HUMAN 1-97
Lk | 60S ribosomal protein L38 | RL38_HUMAN 1-70
Ll | 60S ribosomal protein L39 | RL39_HUMAN 1-51
Lm | eL40 |
Ln | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo | 60S ribosomal protein L36a | J3KQN4_HUMAN 1-106
Lp | 60S ribosomal protein L37a | RL37A_HUMAN 1-92
Lr | 60S ribosomal protein L28 | RL28_HUMAN 1-137
Lz | 60S ribosomal protein L10a | RL10A_HUMAN 1-217
Pt | P-site tRNA |
S2 | 18S rRNA |
SA | 40S ribosomal protein SA | RSSA_HUMAN 1-295
SB | 40S ribosomal protein S3a | RS3A_HUMAN 1-264
SC | 40S ribosomal protein S2 | RS2_HUMAN 1-293
SD | 40S ribosomal protein S3 | RS3_HUMAN 1-243
SE | 40S ribosomal protein S4, X isoform | RS4X_HUMAN 1-263
SF | 40S ribosomal protein S5 | RS5_HUMAN 1-204
SG | 40S ribosomal protein S6 | RS6_HUMAN 1-249
SH | 40S ribosomal protein S7 | RS7_HUMAN 1-194
SI | 40S ribosomal protein S8 | RS8_HUMAN 1-208
SJ | 40S ribosomal protein S9 | RS9_HUMAN 1-194
SK | 40S ribosomal protein S10 | RS10_HUMAN 1-165
SL | 40S ribosomal protein S11 | RS11_HUMAN 1-158
SM | 40S ribosomal protein S12 | RS12_HUMAN 1-132
SN | 40S ribosomal protein S13 | RS13_HUMAN 1-151
SO | 40S ribosomal protein S14 | RS14_HUMAN 1-151
SP | 40S ribosomal protein S15 | RS15_HUMAN 1-145
SQ | 40S ribosomal protein S16 | RS16_HUMAN 1-146
SR | 40S ribosomal protein S17 | RS17_HUMAN 1-135
SS | 40S ribosomal protein S18 | RS18_HUMAN 1-152
ST | 40S ribosomal protein S19 | RS19_HUMAN 1-145
SU | 40S ribosomal protein S20 | RS20_HUMAN 1-119
SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
SW | 40S ribosomal protein S15a | RS15A_HUMAN 1-130
SX | uS12 |
SY | 40S ribosomal protein S24 | RS24_HUMAN 1-133
SZ | 40S ribosomal protein S25 | RS25_HUMAN 1-125
Sa | 40S ribosomal protein S26 | RS26_HUMAN 1-115
Sb | 40S ribosomal protein S27 | RS27_HUMAN 1-84
Sc | 40S ribosomal protein S28 | RS28_HUMAN 1-69
Sd | 40S ribosomal protein S29 | RS29_HUMAN 1-56
Se | FAU ubiquitin-like and ribosomal protein S30 | RS30_HUMAN 1-133
Sf | Ubiquitin-40S ribosomal protein S27a | RS27A_HUMAN 1-156
Sg | Receptor of activated protein C kinase 1 | RACK1_HUMAN 1-317
mR | mRNA |
Non-standard residues in 8g5y #5
---
1MA — 6-hydro-1-methyladenosine-5'-monophosphate
3H3 —
4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione
4AC — N(4)-acetylcytidine-5'-monophosphate
5CT — Hypusine (N~6~-[(2S)-4-amino-2-hydroxybutyl]-L-lysine)
5MC — 5-methylcytidine-5'-monophosphate
6MZ — N6-methyladenosine-5'-monophosphate
A2M — 2'-O-methyladenosine 5'-(dihydrogen phosphate)
AME — N-acetylmethionine
ANM — anisomycin
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
HIC — 4-methyl-histidine
HY3 — 3-hydroxyproline ((2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid)
K — potassium ion
M3L — N-trimethyllysine
MA6 — 6N-dimethyladenosine-5'-monophoshate
MET — methionine
MG — magnesium ion
MLZ — N-methyl-lysine
OMG — O2'-methylguanosine-5'-monophosphate
OMU — O2'-methyluridine 5'-monophosphate
PUT — 1,4-diaminobutane (putrescine)
SAC — N-acetyl-serine
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UR3 — 3-methyluridine-5'-monophoshate
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
V5N — (2S,3S)-2-azanyl-3-(1H-imidazol-5-yl)-3-oxidanyl-propanoic acid
ZN — zinc ion
> open 8G60
8g60 title:
mRNA decoding in human is kinetically and structurally distinct from bacteria
(CR state) [more info...]
Chain information for 8g60 #6
---
Chain | Description | UniProt
At | A-site tRNA |
EF | eEF1A | EF1A1_HUMAN 1-462
L5 | 28S rRNA |
L7 | 5S rRNA |
L8 | 5.8S rRNA |
LA | uL2 |
LB | uL3 | RL3_HUMAN 1-403
LC | uL4 | RL4_HUMAN 1-427
LD | uL18 | RL5_HUMAN 1-297
LE | eL6 | RL6_HUMAN 1-288
LF | uL30 | RL7_HUMAN 1-248
LG | eL8 | RL7A_HUMAN 1-266
LH | uL6 | RL9_HUMAN 1-192
LI | uL16 | RL10_HUMAN 1-214
LJ | uL5 | RL11_HUMAN 1-178
LK | uL11 | RL12_HUMAN 1-165
LL | eL13 | RL13_HUMAN 1-274
LM | eL14 | RL14_HUMAN 1-215
LN | eL15 | RL15_HUMAN 1-204
LO | uL13 | RL13A_HUMAN 1-203
LP | uL22 | RL17_HUMAN 1-184
LQ | eL18 | RL18_HUMAN 1-188
LR | eL19 | RL19_HUMAN 1-196
LS | eL20 | RL18A_HUMAN 1-176
LT | eL21 | RL21_HUMAN 1-160
LU | eL22 | RL22_HUMAN 1-128
LV | uL14 | RL23_HUMAN 1-140
LW | eL24 | RL24_HUMAN 1-157
LX | uL23 | RL23A_HUMAN 1-156
LY | uL24 | RL26_HUMAN 1-145
LZ | eL27 | RL27_HUMAN 1-136
La | uL15 | RL27A_HUMAN 1-148
Lb | eL29 | RL29_HUMAN 1-159
Lc | eL30 | RL30_HUMAN 1-115
Ld | eL31 | RL31_HUMAN 1-125
Le | eL32 | RL32_HUMAN 1-135
Lf | eL33 | RL35A_HUMAN 1-110
Lg | eL34 | RL34_HUMAN 1-117
Lh | uL29 | RL35_HUMAN 1-123
Li | eL36 | RL36_HUMAN 1-105
Lj | eL37 | RL37_HUMAN 1-97
Lk | eL38 | RL38_HUMAN 1-70
Ll | eL39 | RL39_HUMAN 1-51
Lm | eL40 |
Ln | eL41 | RL41_HUMAN 1-25
Lo | eL42 | J3KQN4_HUMAN 1-106
Lp | eL43 | RL37A_HUMAN 1-92
Lq | uL10 | RLA0_HUMAN 1-317
Lr | eL28 | RL28_HUMAN 1-137
Lz | uL1 | RL10A_HUMAN 1-217
Pt | P-site tRNA |
S2 | 18S rRNA |
SA | uS2 | RSSA_HUMAN 1-295
SB | eS1 | RS3A_HUMAN 1-264
SC | uS5 | RS2_HUMAN 1-293
SD | uS3 | RS3_HUMAN 1-243
SE | eS4 | RS4X_HUMAN 1-263
SF | uS7 | RS5_HUMAN 1-204
SG | eS6 | RS6_HUMAN 1-249
SH | eS7 | RS7_HUMAN 1-194
SI | eS8 | RS8_HUMAN 1-208
SJ | uS4 | RS9_HUMAN 1-194
SK | eS10 | RS10_HUMAN 1-165
SL | uS17 | RS11_HUMAN 1-158
SM | eS12 | RS12_HUMAN 1-132
SN | uS15 | RS13_HUMAN 1-151
SO | uS11 | RS14_HUMAN 1-151
SP | uS19 | RS15_HUMAN 1-145
SQ | uS9 | RS16_HUMAN 1-146
SR | eS17 | RS17_HUMAN 1-135
SS | uS13 | RS18_HUMAN 1-152
ST | eS19 | RS19_HUMAN 1-145
SU | uS10 | RS20_HUMAN 1-119
SV | eS21 | RS21_HUMAN 1-83
SW | uS8 | RS15A_HUMAN 1-130
SX | uS12 |
SY | eS24 | RS24_HUMAN 1-133
SZ | eS25 | RS25_HUMAN 1-125
Sa | eS26 | RS26_HUMAN 1-115
Sb | eS27 | RS27_HUMAN 1-84
Sc | eS28 | RS28_HUMAN 1-69
Sd | uS14 | RS29_HUMAN 1-56
Se | eS30 | RS30_HUMAN 1-133
Sf | eS31 | RS27A_HUMAN 1-156
Sg | RACK1 | RACK1_HUMAN 1-317
mR | mRNA |
Non-standard residues in 8g60 #6
---
1MA — 6-hydro-1-methyladenosine-5'-monophosphate
3H3 —
4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione
4AC — N(4)-acetylcytidine-5'-monophosphate
5MC — 5-methylcytidine-5'-monophosphate
6MZ — N6-methyladenosine-5'-monophosphate
A2M — 2'-O-methyladenosine 5'-(dihydrogen phosphate)
AME — N-acetylmethionine
ANM — anisomycin
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
GSP — 5'-guanosine-diphosphate-monothiophosphate
HIC — 4-methyl-histidine
HY3 — 3-hydroxyproline ((2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid)
K — potassium ion
M3L — N-trimethyllysine
MA6 — 6N-dimethyladenosine-5'-monophoshate
MET — methionine
MG — magnesium ion
MIA — 2-methylthio-N6-isopentenyl-adenosine-5'-monophosphate
MLZ — N-methyl-lysine
OMG — O2'-methylguanosine-5'-monophosphate
OMU — O2'-methyluridine 5'-monophosphate
PHE — phenylalanine
PUT — 1,4-diaminobutane (putrescine)
SAC — N-acetyl-serine
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UR3 — 3-methyluridine-5'-monophoshate
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
V5N — (2S,3S)-2-azanyl-3-(1H-imidazol-5-yl)-3-oxidanyl-propanoic acid
ZIY — plitidepsin
ZN — zinc ion
> open 8G5Z
8g5z title:
mRNA decoding in human is kinetically and structurally distinct from bacteria
(GA state) [more info...]
Chain information for 8g5z #7
---
Chain | Description | UniProt
5A | eIF5A1 |
At | A-site tRNA Phe |
EF | Elongation factor 1-alpha 1 | EF1A1_RABIT 4-447
L5 | 28S rRNA |
L7 | 5S rRNA |
L8 | 5.8S rRNA |
LA | uL2 |
LB | 60S ribosomal protein L3 | RL3_HUMAN 2-403
LC | 60S ribosomal protein L4 | RL4_HUMAN 1-368
LD | 60S ribosomal protein L5 | RL5_HUMAN 2-295
LE | eL6 |
LF | 60S ribosomal protein L7 | RL7_HUMAN 24-248
LG | 60S ribosomal protein L7a | RL7A_HUMAN 28-266
LH | 60S ribosomal protein L9 | RL9_HUMAN 1-190
LI | 60S ribosomal protein L10 | RL10_HUMAN 2-214
LJ | 60S ribosomal protein L11 | RL11_HUMAN 8-176
LK | 60S ribosomal protein L12 | RL12_HUMAN 9-155
LL | 60S ribosomal protein L13 | RL13_HUMAN 2-207
LM | 60S ribosomal protein L14 | RL14_HUMAN 2-137
LN | 60S ribosomal protein L15 | RL15_HUMAN 2-204
LO | 60S ribosomal protein L13a | RL13A_HUMAN 3-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 2-154
LQ | 60S ribosomal protein L18 | RL18_HUMAN 2-188
LR | 60S ribosomal protein L19 | RL19_HUMAN 2-188
LS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT | 60S ribosomal protein L21 | RL21_HUMAN 2-160
LU | 60S ribosomal protein L22 | RL22_HUMAN 18-116
LV | 60S ribosomal protein L23 | RL23_HUMAN 1-140
LW | eL24 |
LX | uL23 |
LY | 60S ribosomal protein L26 | RL26_HUMAN 1-134
LZ | 60S ribosomal protein L27 | RL27_HUMAN 2-136
La | 60S ribosomal protein L27a | RL27A_HUMAN 2-148
Lb | eL29 |
Lc | 60S ribosomal protein L30 | RL30_HUMAN 9-106
Ld | 60S ribosomal protein L31 | RL31_HUMAN 18-124
Le | 60S ribosomal protein L32 | RL32_HUMAN 2-129
Lf | 60S ribosomal protein L35a | RL35A_HUMAN 2-110
Lg | 60S ribosomal protein L34 | RL34_HUMAN 2-115
Lh | 60S ribosomal protein L35 | RL35_HUMAN 2-123
Li | 60S ribosomal protein L36 | RL36_HUMAN 2-103
Lj | 60S ribosomal protein L37 | RL37_HUMAN 2-87
Lk | 60S ribosomal protein L38 | RL38_HUMAN 2-70
Ll | 60S ribosomal protein L39 | RL39_HUMAN 2-51
Lm | eL40 |
Ln | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo | Ribosomal protein L36a | J3KQN4_HUMAN 2-106
Lp | 60S ribosomal protein L37a | RL37A_HUMAN 2-92
Lq | 60S acidic ribosomal protein P0 | RLA0_HUMAN 5-200
Lr | 60S ribosomal protein L28 | RL28_HUMAN 2-126
Lz | uL1 |
Pt | P-site tRNA fMet |
S2 | 18S rRNA |
SA | 40S ribosomal protein SA | RSSA_HUMAN 2-223
SB | 40S ribosomal protein S3a | RS3A_HUMAN 2-234
SC | 40S ribosomal protein S2 | RS2_HUMAN 59-280
SD | 40S ribosomal protein S3 | RS3_HUMAN 1-226
SE | eS4 |
SF | 40S ribosomal protein S5 | RS5_HUMAN 16-204
SG | 40S ribosomal protein S6 | RS6_HUMAN 1-237
SH | 40S ribosomal protein S7 | RS7_HUMAN 5-193
SI | 40S ribosomal protein S8 | RS8_HUMAN 2-207
SJ | 40S ribosomal protein S9 | RS9_HUMAN 2-186
SK | eS10 |
SL | uS17 |
SM | eS12 |
SN | 40S ribosomal protein S13 | RS13_HUMAN 2-151
SO | uS11 |
SP | uS19 |
SQ | uS9 |
SR | 40S ribosomal protein S17 | RS17_HUMAN 2-135
SS | uS13 |
ST | 40S ribosomal protein S19 | RS19_HUMAN 2-144
SU | uS10 |
SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
SW | 40S ribosomal protein S15a | RS15A_HUMAN 2-130
SX | uS12 |
SY | 40S ribosomal protein S24 | RS24_HUMAN 2-132
SZ | eS25 |
Sa | 40S ribosomal protein S26 | RS26_HUMAN 2-100
Sb | eS27 |
Sc | 40S ribosomal protein S28 | RS28_HUMAN 5-68
Sd | 40S ribosomal protein S29 | RS29_HUMAN 2-56
Se | 40S ribosomal protein S30 | RS30_HUMAN 75-133
Sf | eS31 |
Sg | Receptor of activated protein C kinase 1 | RACK1_HUMAN 2-314
mR | mRNA |
Non-standard residues in 8g5z #7
---
1MA — 6-hydro-1-methyladenosine-5'-monophosphate
3H3 —
4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione
4AC — N(4)-acetylcytidine-5'-monophosphate
5CT — Hypusine (N~6~-[(2S)-4-amino-2-hydroxybutyl]-L-lysine)
5MC — 5-methylcytidine-5'-monophosphate
6MZ — N6-methyladenosine-5'-monophosphate
A2M — 2'-O-methyladenosine 5'-(dihydrogen phosphate)
AME — N-acetylmethionine
ANM — anisomycin
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
GSP — 5'-guanosine-diphosphate-monothiophosphate
HIC — 4-methyl-histidine
HY3 — 3-hydroxyproline ((2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid)
K — potassium ion
M3L — N-trimethyllysine
MA6 — 6N-dimethyladenosine-5'-monophoshate
MET — methionine
MG — magnesium ion
MIA — 2-methylthio-N6-isopentenyl-adenosine-5'-monophosphate
MLZ — N-methyl-lysine
OMG — O2'-methylguanosine-5'-monophosphate
OMU — O2'-methyluridine 5'-monophosphate
PHE — phenylalanine
PUT — 1,4-diaminobutane (putrescine)
SAC — N-acetyl-serine
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UR3 — 3-methyluridine-5'-monophoshate
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
V5N — (2S,3S)-2-azanyl-3-(1H-imidazol-5-yl)-3-oxidanyl-propanoic acid
ZIY — plitidepsin
ZN — zinc ion
> open 8G61
8g61 title:
mRNA decoding in human is kinetically and structurally distinct from bacteria
(AC state) [more info...]
Chain information for 8g61 #8
---
Chain | Description | UniProt
5A | eIF5A1 |
At | A-site tRNA |
L5 | 28S rRNA |
L7 | 5S rRNA |
L8 | 5.8S rRNA |
LA | uL2 |
LB | 60S ribosomal protein L3 | RL3_HUMAN 1-403
LC | 60S ribosomal protein L4 | RL4_HUMAN 1-427
LD | 60S ribosomal protein L5 | RL5_HUMAN 1-297
LE | 60S ribosomal protein L6 | RL6_HUMAN 1-288
LF | 60S ribosomal protein L7 | RL7_HUMAN 1-248
LG | 60S ribosomal protein L7a | RL7A_HUMAN 1-266
LH | 60S ribosomal protein L9 | RL9_HUMAN 1-192
LI | 60S ribosomal protein L10 | RL10_HUMAN 1-214
LJ | 60S ribosomal protein L11 | RL11_HUMAN 1-178
LL | 60S ribosomal protein L13 | RL13_HUMAN 1-211
LM | 60S ribosomal protein L14 | RL14_HUMAN 1-215
LN | 60S ribosomal protein L15 | RL15_HUMAN 1-204
LO | 60S ribosomal protein L13a | RL13A_HUMAN 1-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 1-184
LQ | 60S ribosomal protein L18 | RL18_HUMAN 1-188
LR | 60S ribosomal protein L19 | RL19_HUMAN 1-196
LS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT | 60S ribosomal protein L21 | RL21_HUMAN 1-160
LU | 60S ribosomal protein L22 | RL22_HUMAN 1-128
LV | 60S ribosomal protein L23 | RL23_HUMAN 1-140
LW | 60S ribosomal protein L24 | RL24_HUMAN 1-157
LX | 60S ribosomal protein L23a | RL23A_HUMAN 1-156
LY | 60S ribosomal protein L26 | RL26_HUMAN 1-145
LZ | 60S ribosomal protein L27 | RL27_HUMAN 1-136
La | 60S ribosomal protein L27a | RL27A_HUMAN 1-148
Lb | 60S ribosomal protein L29 | RL29_HUMAN 1-159
Lc | 60S ribosomal protein L30 | RL30_HUMAN 1-115
Ld | 60S ribosomal protein L31 | RL31_HUMAN 1-125
Le | 60S ribosomal protein L32 | RL32_HUMAN 1-135
Lf | 60S ribosomal protein L35a | RL35A_HUMAN 1-110
Lg | 60S ribosomal protein L34 | RL34_HUMAN 1-117
Lh | 60S ribosomal protein L35 | RL35_HUMAN 1-123
Li | 60S ribosomal protein L36 | RL36_HUMAN 1-105
Lj | 60S ribosomal protein L37 | RL37_HUMAN 1-97
Lk | 60S ribosomal protein L38 | RL38_HUMAN 1-70
Ll | 60S ribosomal protein L39 | RL39_HUMAN 1-51
Lm | eL40 |
Ln | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo | 60S ribosomal protein L36a | J3KQN4_HUMAN 1-106
Lp | 60S ribosomal protein L37a | RL37A_HUMAN 1-92
Lr | 60S ribosomal protein L28 | RL28_HUMAN 1-137
Lz | 60S ribosomal protein L10a | RL10A_HUMAN 1-217
Pt | RNA (77-MER) |
S2 | 18S rRNA |
SA | 40S ribosomal protein SA | RSSA_HUMAN 1-295
SB | 40S ribosomal protein S3a | RS3A_HUMAN 1-264
SC | 40S ribosomal protein S2 | RS2_HUMAN 1-293
SD | 40S ribosomal protein S3 | RS3_HUMAN 1-243
SE | 40S ribosomal protein S4, X isoform | RS4X_HUMAN 1-263
SF | 40S ribosomal protein S5 | RS5_HUMAN 1-204
SG | 40S ribosomal protein S6 | RS6_HUMAN 1-249
SH | 40S ribosomal protein S7 | RS7_HUMAN 1-194
SI | 40S ribosomal protein S8 | RS8_HUMAN 1-208
SJ | 40S ribosomal protein S9 | RS9_HUMAN 1-194
SK | 40S ribosomal protein S10 | RS10_HUMAN 1-165
SL | 40S ribosomal protein S11 | RS11_HUMAN 1-158
SM | 40S ribosomal protein S12 | RS12_HUMAN 1-132
SN | 40S ribosomal protein S13 | RS13_HUMAN 1-151
SO | 40S ribosomal protein S14 | RS14_HUMAN 1-151
SP | 40S ribosomal protein S15 | RS15_HUMAN 1-145
SQ | 40S ribosomal protein S16 | RS16_HUMAN 1-146
SR | 40S ribosomal protein S17 | RS17_HUMAN 1-135
SS | 40S ribosomal protein S18 | RS18_HUMAN 1-152
ST | 40S ribosomal protein S19 | RS19_HUMAN 1-145
SU | 40S ribosomal protein S20 | RS20_HUMAN 1-119
SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
SW | 40S ribosomal protein S15a | RS15A_HUMAN 1-130
SX | uS12 |
SY | 40S ribosomal protein S24 | RS24_HUMAN 1-133
SZ | 40S ribosomal protein S25 | RS25_HUMAN 1-125
Sa | 40S ribosomal protein S26 | RS26_HUMAN 1-115
Sb | 40S ribosomal protein S27 | RS27_HUMAN 1-84
Sc | 40S ribosomal protein S28 | RS28_HUMAN 1-69
Sd | 40S ribosomal protein S29 | RS29_HUMAN 1-56
Se | FAU ubiquitin-like and ribosomal protein S30 | RS30_HUMAN -73-59
Sf | Ubiquitin-40S ribosomal protein S27a | RS27A_HUMAN 1-156
Sg | Receptor of activated protein C kinase 1 | RACK1_HUMAN 1-317
mR | mRNA |
Non-standard residues in 8g61 #8
---
1MA — 6-hydro-1-methyladenosine-5'-monophosphate
3H3 —
4-{(2R,5S,6E)-2-hydroxy-5-methyl-7-[(2R,3S,4E,6Z,10E)-3-methyl-12-oxooxacyclododeca-4,6,10-trien-2-yl]-4-oxooct-6-en-1-yl}piperidine-2,6-dione
4AC — N(4)-acetylcytidine-5'-monophosphate
5CT — Hypusine (N~6~-[(2S)-4-amino-2-hydroxybutyl]-L-lysine)
5MC — 5-methylcytidine-5'-monophosphate
6MZ — N6-methyladenosine-5'-monophosphate
A2M — 2'-O-methyladenosine 5'-(dihydrogen phosphate)
AME — N-acetylmethionine
ANM — anisomycin
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
HIC — 4-methyl-histidine
HY3 — 3-hydroxyproline ((2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid)
K — potassium ion
M3L — N-trimethyllysine
MA6 — 6N-dimethyladenosine-5'-monophoshate
MET — methionine
MG — magnesium ion
MLZ — N-methyl-lysine
OMG — O2'-methylguanosine-5'-monophosphate
OMU — O2'-methyluridine 5'-monophosphate
PUT — 1,4-diaminobutane (putrescine)
SAC — N-acetyl-serine
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UR3 — 3-methyluridine-5'-monophoshate
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
V5N — (2S,3S)-2-azanyl-3-(1H-imidazol-5-yl)-3-oxidanyl-propanoic acid
ZN — zinc ion
> open 8G6J
8g6j title:
mRNA decoding in human is kinetically and structurally distinct from bacteria
(GA state 2) [more info...]
Chain information for 8g6j #9
---
Chain | Description | UniProt
At | A-site tRNA |
EF | Elongation factor 1-alpha 1 | EF1A1_HUMAN 1-462
L5 | 28S rRNA |
L7 | 5S rRNA |
L8 | 5.8S rRNA |
LA | uL2 |
LB | 60S ribosomal protein L3 | RL3_HUMAN 1-403
LC | 60S ribosomal protein L4 | RL4_HUMAN 1-427
LD | 60S ribosomal protein L5 | RL5_HUMAN 1-297
LE | 60S ribosomal protein L6 | RL6_HUMAN 1-288
LF | 60S ribosomal protein L7 | RL7_HUMAN 1-248
LG | 60S ribosomal protein L7a | RL7A_HUMAN 1-266
LH | 60S ribosomal protein L9 | RL9_HUMAN 1-192
LI | 60S ribosomal protein L10 | RL10_HUMAN 1-214
LJ | 60S ribosomal protein L11 | RL11_HUMAN 1-178
LK | 60S ribosomal protein L12 | RL12_HUMAN 1-165
LL | eL13 |
LM | 60S ribosomal protein L14 | RL14_HUMAN 1-215
LN | 60S ribosomal protein L15 | RL15_HUMAN 1-204
LO | 60S ribosomal protein L13a | RL13A_HUMAN 1-203
LP | 60S ribosomal protein L17 | RL17_HUMAN 1-184
LQ | 60S ribosomal protein L18 | RL18_HUMAN 1-188
LR | 60S ribosomal protein L19 | RL19_HUMAN 1-196
LS | 60S ribosomal protein L18a | RL18A_HUMAN 1-176
LT | 60S ribosomal protein L21 | RL21_HUMAN 1-160
LU | 60S ribosomal protein L22 | RL22_HUMAN 1-128
LV | 60S ribosomal protein L23 | RL23_HUMAN 1-140
LW | 60S ribosomal protein L24 | RL24_HUMAN 1-157
LX | 60S ribosomal protein L23a | RL23A_HUMAN 1-156
LY | 60S ribosomal protein L26 | RL26_HUMAN 1-145
LZ | 60S ribosomal protein L27 | RL27_HUMAN 1-136
La | 60S ribosomal protein L27a | RL27A_HUMAN 1-148
Lb | 60S ribosomal protein L29 | RL29_HUMAN 1-159
Lc | 60S ribosomal protein L30 | RL30_HUMAN 1-115
Ld | 60S ribosomal protein L31 | RL31_HUMAN 1-125
Le | 60S ribosomal protein L32 | RL32_HUMAN 1-135
Lf | 60S ribosomal protein L35a | RL35A_HUMAN 1-110
Lg | 60S ribosomal protein L34 | RL34_HUMAN 1-117
Lh | 60S ribosomal protein L35 | RL35_HUMAN 1-123
Li | 60S ribosomal protein L36 | RL36_HUMAN 1-105
Lj | 60S ribosomal protein L37 | RL37_HUMAN 1-97
Lk | 60S ribosomal protein L38 | RL38_HUMAN 1-70
Ll | 60S ribosomal protein L39 | RL39_HUMAN 1-51
Lm | eL40 |
Ln | 60S ribosomal protein L41 | RL41_HUMAN 1-25
Lo | 60S ribosomal protein L36a | J3KQN4_HUMAN 1-106
Lp | 60S ribosomal protein L37a | RL37A_HUMAN 1-92
Lq | 60S acidic ribosomal protein P0 | RLA0_HUMAN 1-317
Lr | 60S ribosomal protein L28 | RL28_HUMAN 1-137
Lz | 60S ribosomal protein L10a | RL10A_HUMAN 1-217
Pt | P-site tRNA |
S2 | 18S rRNA |
SA | 40S ribosomal protein SA | RSSA_HUMAN 1-295
SB | 40S ribosomal protein S3a | RS3A_HUMAN 1-264
SC | 40S ribosomal protein S2 | RS2_HUMAN 1-293
SD | 40S ribosomal protein S3 | RS3_HUMAN 1-243
SE | 40S ribosomal protein S4, X isoform | RS4X_HUMAN 1-263
SF | 40S ribosomal protein S5 | RS5_HUMAN 1-204
SG | 40S ribosomal protein S6 | RS6_HUMAN 1-249
SH | 40S ribosomal protein S7 | RS7_HUMAN 1-194
SI | 40S ribosomal protein S8 | RS8_HUMAN 1-208
SJ | 40S ribosomal protein S9 | RS9_HUMAN 1-194
SK | 40S ribosomal protein S10 | RS10_HUMAN 1-165
SL | 40S ribosomal protein S11 | RS11_HUMAN 1-158
SM | 40S ribosomal protein S12 | RS12_HUMAN 1-132
SN | 40S ribosomal protein S13 | RS13_HUMAN 1-151
SO | 40S ribosomal protein S14 | RS14_HUMAN 1-151
SP | 40S ribosomal protein S15 | RS15_HUMAN 1-145
SQ | 40S ribosomal protein S16 | RS16_HUMAN 1-146
SR | 40S ribosomal protein S17 | RS17_HUMAN 1-135
SS | 40S ribosomal protein S18 | RS18_HUMAN 1-152
ST | 40S ribosomal protein S19 | RS19_HUMAN 1-145
SU | 40S ribosomal protein S20 | RS20_HUMAN 1-119
SV | 40S ribosomal protein S21 | RS21_HUMAN 1-83
SW | 40S ribosomal protein S15a | RS15A_HUMAN 1-130
SX | uS12 |
SY | 40S ribosomal protein S24 | RS24_HUMAN 1-133
SZ | 40S ribosomal protein S25 | RS25_HUMAN 1-125
Sa | 40S ribosomal protein S26 | RS26_HUMAN 1-115
Sb | 40S ribosomal protein S27 | RS27_HUMAN 1-84
Sc | 40S ribosomal protein S28 | RS28_HUMAN 1-69
Sd | 40S ribosomal protein S29 | RS29_HUMAN 1-56
Se | FAU ubiquitin-like and ribosomal protein S30 | RS30_HUMAN 1-133
Sf | Ubiquitin-40S ribosomal protein S27a | RS27A_HUMAN 1-156
Sg | Receptor of activated protein C kinase 1 | RACK1_HUMAN 1-317
mR | mRNA |
Non-standard residues in 8g6j #9
---
3HE —
4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione
B8N —
(2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic
acid
GSP — 5'-guanosine-diphosphate-monothiophosphate
HMT —
(3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine
(Homoharringtonine; Cephalotaxine; [3(R)]-4-methyl
2-hydroxy-2-(4-hydroxy-4-methylpentyl)butanedioate)
K — potassium ion
MET — methionine
MG — magnesium ion
PHE — phenylalanine
PUT — 1,4-diaminobutane (putrescine)
SPD — spermidine (N-(2-amino-propyl)-1,4-diaminobutane; Pa(34))
UY1 — 2'-O-methylpseudouridine-5'-monophosphate
YRB —
(3R,6R,9S,12S,15S,18S,20R,24aR)-6-[(2S)-butan-2-yl]-3,12-bis[(1R)-1-hydroxy-2-methylpropyl]-8,9,11,17,18-pentamethyl-15-[(2S)-2-methylbutyl]hexadecahydropyrido[1,2-a][1,4,7,10,13,16,19]heptaazacyclohenicosine-1,4,7,10,13,16,19(21H)-heptone
ZN — zinc ion
> ui tool show Matchmaker
> matchmaker #!2-9 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with Male_mutant_class2_real_space_refined_009.cif, chain L5
(#2), sequence alignment score = 20017
RMSD between 3113 pruned atom pairs is 0.535 angstroms; (across all 3373
pairs: 1.997)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with mwt_class2_real_space_refined_013.cif, chain L5 (#3),
sequence alignment score = 19001.1
RMSD between 2974 pruned atom pairs is 1.120 angstroms; (across all 3241
pairs: 2.421)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with Mwt_class3_real_space_refined_003.cif, chain L5 (#4),
sequence alignment score = 20980.9
RMSD between 3202 pruned atom pairs is 1.110 angstroms; (across all 3494
pairs: 1.709)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with 8g5y, chain L5 (#5), sequence alignment score = 19265.4
RMSD between 3105 pruned atom pairs is 0.688 angstroms; (across all 3512
pairs: 2.870)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with 8g60, chain L5 (#6), sequence alignment score = 19257
RMSD between 3095 pruned atom pairs is 0.664 angstroms; (across all 3505
pairs: 3.139)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with 8g5z, chain L5 (#7), sequence alignment score = 20647.5
RMSD between 3086 pruned atom pairs is 0.653 angstroms; (across all 3529
pairs: 3.441)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with 8g61, chain L5 (#8), sequence alignment score = 19265.4
RMSD between 3109 pruned atom pairs is 0.674 angstroms; (across all 3512
pairs: 2.813)
Matchmaker Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb,
chain L5 (#1) with 8g6j, chain L5 (#9), sequence alignment score = 19284.1
RMSD between 3096 pruned atom pairs is 0.656 angstroms; (across all 3525
pairs: 2.861)
> show cartoons
> hide atoms
> color #1 #aa00ffff
> color #2 #0055ffff
> color #3 #ffaa00ff
> color #4 #55ffffff
> color #5 #aaaa00ff
> color #6 #aaaaffff
> color #7 #55aa7fff
> color #8 #55ffffff
> color #8 #ffaaffff
> color #9 yellow
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> select #1/l5:1569
Nothing selected
> select #1/L5:1569
22 atoms, 24 bonds, 1 residue, 1 model selected
> select add #1/SP
995 atoms, 1016 bonds, 121 residues, 1 model selected
> select ~sel
2070743 atoms, 2207846 bonds, 55450 pseudobonds, 160979 residues, 33 models
selected
> hide sel & #!1-4 cartoons
> select #2/L5:1569
Nothing selected
> select #3/L5:1569
Nothing selected
> select #4/L5:1569
22 atoms, 24 bonds, 1 residue, 1 model selected
> show sel atoms
> show sel cartoons
> style sel stick
Changed 22 atom styles
> hide sel cartoons
> select #1/L5:1569
22 atoms, 24 bonds, 1 residue, 1 model selected
> show sel atoms
> hide sel cartoons
> style sel stick
Changed 22 atom styles
> select add #4/SP
1036 atoms, 1058 bonds, 34 pseudobonds, 127 residues, 3 models selected
> show sel cartoons
> select clear
> select add #5-9/SP
5425 atoms, 5536 bonds, 661 residues, 5 models selected
> show #!1-4 cartoons
> undo
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> select add #5
224004 atoms, 238305 bonds, 7274 pseudobonds, 20003 residues, 8 models
selected
> select add #6
446673 atoms, 476477 bonds, 13687 pseudobonds, 38820 residues, 11 models
selected
> select add #7
672863 atoms, 718355 bonds, 20298 pseudobonds, 58012 residues, 13 models
selected
> select add #8
891047 atoms, 952474 bonds, 26484 pseudobonds, 75830 residues, 16 models
selected
> select add #9
1115652 atoms, 1193198 bonds, 32737 pseudobonds, 94410 residues, 19 models
selected
> hide sel cartoons
> select add #5-9/SP
1115652 atoms, 1193198 bonds, 32737 pseudobonds, 94410 residues, 19 models
selected
> show sel cartoons
> undo
> select clear
> select add #5-9/SP
5425 atoms, 5536 bonds, 661 residues, 5 models selected
> show sel cartoons
> select #5-9/L5:1766
110 atoms, 120 bonds, 5 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 110 atom styles
> select clear
> view
> hide cartoons
> undo
> select #1/L5:1569
22 atoms, 24 bonds, 1 residue, 1 model selected
> hide sel cartoons
> select clear
> hide #!9 models
> hide #!8 models
> hide #!7 models
> hide #!6 models
> hide #!5 models
Drag select of 25 atoms, 11 residues, 29 bonds
> ui tool show Contacts
> contacts sel restrict both intraMol false ignoreHiddenModels true color
> #000000 dashes 8 radius 0.015 reveal true log true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
380 contacts
atom1 atom2 overlap distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 3.113 0.647
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 3.113 0.407
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 3.101 0.549
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 3.053 0.707
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 2.879 0.881
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE 2.698 1.062
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB 2.673 1.087
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CE Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE 2.570 1.190
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 SD Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE 2.557 1.093
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 2.497 1.263
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB 2.455 1.305
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 2.437 1.323
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 2.435 0.815
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 2.431 0.599
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 2.397 1.363
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 2.348 1.412
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 2.333 1.427
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB 2.286 1.474
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE1 2.279 1.021
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 2.261 1.499
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG 2.251 1.509
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 2.247 1.403
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 2.247 1.513
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE 2.246 1.514
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 2.239 1.521
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 2.217 1.543
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 2.192 1.208
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE 2.175 1.585
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 2.168 1.592
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 2.164 1.596
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 2.161 1.329
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 2.149 1.611
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 2.126 1.394
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 2.105 1.655
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB 2.094 1.666
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 2.092 1.668
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 NZ Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 NZ 2.081 1.199
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CE Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 NZ 2.068 1.452
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA 2.053 1.707
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 2.052 1.468
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 2.042 1.208
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 2.040 1.260
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 2.040 1.360
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB 2.037 1.723
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE2 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE1 2.031 0.809
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 2.013 1.507
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C 1.969 1.061
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE2 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 1.960 1.340
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.958 1.802
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 1.950 1.080
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 NZ 1.940 1.580
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 1.937 1.583
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD 1.932 1.828
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB 1.924 1.836
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 1.903 0.757
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 1.890 1.600
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD 1.884 1.876
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 1.862 1.898
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N 1.836 1.444
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 1.834 1.416
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 1.833 1.687
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 1.821 1.939
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 1.811 1.949
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 1.788 1.702
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE 1.772 1.988
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 1.772 1.718
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 1.767 1.753
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD 1.753 2.007
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 1.733 1.547
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 1.732 1.548
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 1.701 1.519
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.699 1.601
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 1.689 1.531
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 1.687 1.613
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 SD Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 1.682 1.858
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 1.678 1.572
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.676 1.814
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 1.675 1.605
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 1.663 2.097
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C 1.654 1.566
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 1.643 1.607
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 1.632 1.668
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 1.600 1.680
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 1.593 1.627
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE 1.592 2.168
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 1.588 2.172
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG 1.559 2.201
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 1.544 1.946
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 1.529 2.231
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 1.527 1.753
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 1.521 2.239
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 1.513 2.137
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CG 1.506 2.254
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CE Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE 1.501 2.259
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE1 1.492 1.808
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 1.492 2.268
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N1 1.477 1.803
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 1.468 1.752
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB 1.468 2.292
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 1.462 1.838
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 1.461 2.059
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 1.457 2.033
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 1.454 1.386
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 1.444 1.586
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 1.443 2.317
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB 1.440 2.320
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.413 2.107
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 1.392 2.098
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 1.389 2.131
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O 1.387 1.453
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 1.383 1.917
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C 1.377 2.113
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 1.377 2.143
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 1.370 2.150
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 1.335 1.965
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.327 2.163
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 1.315 2.205
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB 1.314 2.446
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 O Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 1.300 1.540
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 1.300 2.190
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 1.296 2.004
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 1.292 2.228
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 1.291 2.199
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA 1.282 2.478
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 O 1.282 1.558
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.279 2.481
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CE Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 1.256 2.504
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 1.254 2.266
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 1.251 2.269
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O 1.248 1.782
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 NZ 1.241 2.279
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 1.225 2.075
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O 1.165 2.135
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 1.163 2.597
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CG 1.155 2.605
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 1.123 2.127
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 1.108 2.652
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 1.104 2.386
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 1.102 2.198
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 1.099 1.561
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 O 1.083 1.757
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 1.078 1.582
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 1.034 2.486
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD 1.024 2.736
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 1.015 2.745
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA 1.015 2.285
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N 1.000 2.520
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG 0.999 2.761
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 0.995 2.285
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB 0.995 2.765
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 0.993 2.497
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD 0.992 2.528
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 0.982 2.318
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O 0.980 2.080
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 0.976 2.784
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 0.960 2.800
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 0.952 2.298
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 0.939 2.361
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB 0.938 2.822
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 0.937 2.583
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N9 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 0.928 2.352
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 0.924 2.326
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N 0.915 2.335
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N 0.914 2.336
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA 0.901 2.619
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C 0.899 2.591
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 0.893 2.627
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 0.888 2.872
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 0.887 2.143
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 0.871 2.429
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA 0.861 2.899
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG 0.859 2.901
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE2 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 0.849 1.991
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 NZ Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE 0.848 2.672
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 0.847 2.673
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 0.845 2.675
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB 0.844 2.916
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C6 0.830 2.420
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 0.830 2.540
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 0.826 2.664
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA 0.823 2.477
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.814 2.946
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD 0.808 2.492
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 0.798 2.692
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 0.791 2.729
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 0.787 2.703
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 0.779 2.591
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 0.777 2.523
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 0.773 2.987
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 0.743 2.507
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N 0.742 2.778
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA 0.739 2.751
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 0.738 2.322
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 0.731 2.519
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N 0.726 2.794
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE 0.725 3.035
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 0.717 2.773
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE2 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG 0.714 2.586
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N 0.703 2.817
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE1 0.692 2.148
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CE Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 0.688 2.962
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 0.686 2.714
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C5 0.686 2.564
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C 0.679 2.811
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N 0.678 2.842
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 0.673 2.817
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N 0.667 1.993
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB 0.650 2.840
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N 0.648 2.872
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 0.632 2.858
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CE Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA 0.627 3.133
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB 0.626 3.134
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 0.611 2.689
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 0.610 2.690
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 0.604 2.646
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB 0.599 2.701
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N 0.564 2.956
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N9 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 0.551 2.849
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 0.547 3.213
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 0.542 2.678
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 0.533 2.307
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 0.527 2.963
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 0.526 2.774
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.506 2.794
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CG 0.504 3.256
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 0.497 3.263
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 0.496 2.994
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 0.494 2.996
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP VAL 75 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 0.483 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB 0.478 3.012
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA 0.477 3.043
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 0.477 3.013
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA 0.474 3.286
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C 0.470 2.780
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 0.469 3.021
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N 0.462 2.788
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 O 0.455 2.575
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA 0.447 3.073
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.443 2.857
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.421 3.339
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 0.408 2.892
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 0.401 3.089
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 0.386 2.644
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 0.378 3.002
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP MET 70 N 0.371 3.149
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C4 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 0.348 2.902
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CG 0.348 3.412
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 0.336 3.424
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N 0.322 2.958
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 O Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C 0.319 2.711
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 O 0.316 2.714
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CE Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB 0.299 3.461
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N1 0.293 2.957
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C 0.289 3.201
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C6 0.279 2.971
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB 0.278 3.212
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 SD Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 0.277 3.373
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 0.258 3.502
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C 0.257 3.233
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB 0.256 3.504
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 NZ Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB 0.247 3.273
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 0.246 3.274
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 0.217 3.303
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O 0.213 3.087
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O 0.200 3.100
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C5 0.173 3.047
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 0.173 3.127
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.172 3.588
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 0.167 3.133
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CA 0.167 3.593
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CE Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG 0.167 3.593
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB 0.166 3.134
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N 0.149 3.101
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 0.148 3.612
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD 0.147 3.043
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 0.144 3.376
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 0.124 3.396
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 O 0.122 3.178
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP VAL 75 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA 0.119 3.401
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O 0.116 2.724
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA 0.101 3.659
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N6 0.099 3.181
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C 0.094 3.126
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CG Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N 0.093 3.427
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C1' 0.087 3.433
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C5 0.083 3.167
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB 0.077 3.683
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C 0.063 2.967
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 NZ Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD 0.062 3.458
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C4 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 0.051 3.319
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG 0.047 3.253
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C6 0.046 3.174
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CB 0.045 3.715
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA 0.043 3.717
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CD 0.038 3.452
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CE Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CG 0.028 3.732
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA 0.019 3.281
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA 0.001 3.759
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N9 -0.006 3.256
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O -0.007 3.037
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C -0.008 3.228
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CG Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA -0.018 3.778
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N -0.029 3.309
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C -0.036 3.256
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C -0.038 3.528
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 C -0.044 3.294
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N7 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N9 -0.057 3.337
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C -0.071 3.561
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N -0.076 3.326
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N -0.079 3.599
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 N -0.084 3.334
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C5 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 -0.094 3.464
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP VAL 75 CA Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 C -0.104 3.594
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 SD Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB -0.107 3.757
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O -0.107 3.407
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C4 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 -0.110 3.330
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O -0.114 3.414
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CE Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N -0.117 3.637
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB -0.120 3.420
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C -0.123 3.613
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB -0.125 3.645
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG -0.130 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C5 -0.131 3.351
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CA -0.136 3.436
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N -0.140 3.660
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C -0.141 3.631
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 -0.150 3.520
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 O Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CB -0.152 3.452
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N9 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 -0.154 3.554
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C -0.158 3.188
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA -0.160 3.460
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CE Mwt_class3_real_space_refined_003.cif #4/SP MET 70 CA -0.166 3.926
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CA -0.168 3.928
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O -0.170 3.200
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 CA -0.176 3.696
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA -0.179 3.939
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 N -0.190 3.250
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N -0.200 3.720
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C -0.210 3.700
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CB -0.212 3.512
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N -0.215 2.875
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD -0.217 3.707
Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CG Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 N -0.222 3.742
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP MET 70 C -0.222 3.712
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C6 -0.223 3.443
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 CB Mwt_class3_real_space_refined_003.cif #4/SP MET 70 N -0.228 3.748
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C -0.232 3.722
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C4 -0.237 3.457
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C5 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N9 -0.245 3.495
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 N -0.254 3.774
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CD Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CA -0.262 4.022
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CG Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C -0.270 3.760
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD -0.287 3.777
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O -0.292 3.132
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C8 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C1' -0.292 3.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 O Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 O -0.301 3.141
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 CG Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CA -0.303 4.063
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 CD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N -0.305 3.825
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 OE2 -0.306 3.336
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 C -0.310 3.800
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 O -0.317 3.617
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 N Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB -0.318 3.838
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 CB Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 O -0.319 3.619
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG -0.320 3.620
Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 N -0.324 3.844
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 -0.330 3.700
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CB -0.343 3.643
Mwt_class3_real_space_refined_003.cif #4/SP MET 70 SD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP MET 70 N -0.354 3.364
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 C Mwt_class3_real_space_refined_003.cif #4/SP PRO 73 CB -0.361 3.851
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 N9 -0.362 3.882
Mwt_class3_real_space_refined_003.cif #4/SP GLU 74 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 74 N -0.363 3.023
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP LYS 72 C Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 C -0.366 3.586
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 O Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 CG -0.369 3.669
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 N1 -0.374 3.624
Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C -0.378 3.408
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 C Mwt_class3_real_space_refined_003.cif #4/SP MET 70 O -0.379 3.409
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE2 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE1 -0.386 3.226
Mwt_class3_real_space_refined_003.cif #4/L5 A 1569 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1569 C1' -0.396 4.036
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP PRO 73 CD Mwt_class3_real_space_refined_003.cif #4/SP LYS 72 N -0.397 3.917
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SP GLU 71 OE1 Mwt_class3_real_space_refined_003.cif #4/SP GLU 71 OE2 -0.398 3.238
380 contacts
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
0 contacts
atom1 atom2 overlap distance
No contacts
> hide #10 models
> close #10
> style sel stick
Changed 116 atom styles
> select clear
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> select clear
Drag select of 86 atoms, 97 residues, 95 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
0 contacts
atom1 atom2 overlap distance
No contacts
> select clear
> show #!1 models
> show #!2 models
> show #!3 models
> show #!4 models
> hide cartoons
> hide atoms
> select #1-4/S2:1707-1710, 1828-1830, 1061
770 atoms, 838 bonds, 9 pseudobonds, 32 residues, 7 models selected
> show sel atoms
> view sel
> style sel stick
Changed 770 atom styles
> select #5-9/S2:1707-1710, 1826-1830, 1849-1850, 1059-1061
1505 atoms, 1660 bonds, 20 pseudobonds, 70 residues, 10 models selected
> show sel atoms
> style sel stick
Changed 1505 atom styles
> select #1-4/L5:3765-3768, 3759-3760, 3762
537 atoms, 582 bonds, 23 residues, 4 models selected
> show sel atoms
[Repeated 1 time(s)]
> view sel
> hide sel atoms
> select #5-9/L5:3765-3768, 3759-3760, 3762
750 atoms, 825 bonds, 35 residues, 5 models selected
> show sel atoms
> view sel
> nucleotides sel atoms
> style nucleic & sel stick
Changed 750 atom styles
> select #1-4/L5:3410-3433
2273 atoms, 2509 bonds, 41 pseudobonds, 95 residues, 8 models selected
> show sel atoms
> style sel stick
Changed 2273 atom styles
> hide sel atoms
> select #1-4/L5:3423-3424, 3417-3420
536 atoms, 585 bonds, 23 residues, 4 models selected
> show sel atoms
> select clear
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> close #10
> hide #!3 models
> hide #!2 models
Drag select of 262 atoms, 295 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
10 contacts
atom1 atom2 overlap distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.075 2.775
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.139 2.839
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.161 3.681
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 -0.229 3.329
Mwt_class3_real_space_refined_003.cif #4/S2 G 1710 O3' Mwt_class3_real_space_refined_003.cif #4/L5 A 3420 N1 -0.238 3.338
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.254 2.954
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.319 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C6 -0.325 3.395
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' -0.372 3.592
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.380 3.900
10 contacts
> select clear
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> hide #!4 models
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> select clear
Drag select of 2239 atoms, 27 pseudobonds, 2477 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
470 contacts
atom1 atom2 overlap distance
8g60 #6/L5 A2M 3760 N6 8g60 #6/S2 G 1826 C8 0.368 3.032
8g61 #8/L5 A2M 3760 C5 8g61 #8/S2 G 1826 C5' 0.318 3.172
8g61 #8/L5 A 3759 N6 8g61 #8/S2 G 1709 C5' 0.300 3.220
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 N7 0.270 3.250
8g5y #5/S2 G 1826 O2' 8g5y #5/L5 A 3759 O2' 0.266 2.254
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 N7 0.249 3.271
8g61 #8/L5 A2M 3760 N7 8g61 #8/S2 G 1826 C5' 0.240 3.280
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 OP1 0.230 2.950
8g60 #6/L5 A 3759 O2' 8g60 #6/S2 G 1826 C2' 0.206 3.134
8g60 #6/S2 U 1830 P 8g60 #6/S2 G 1059 N1 0.195 3.545
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 N1 0.188 2.512
8g6j #9/S2 U 1707 C1' 8g6j #9/S2 MA6 1850 O2' 0.173 3.167
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 N7 0.170 3.350
8g5y #5/S2 G 1826 C5' 8g5y #5/L5 A2M 3760 C2 0.169 3.471
8g5y #5/S2 C 1828 C4' 8g5y #5/L5 C 3767 O2' 0.167 3.173
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 O2' 0.153 3.187
8g5y #5/L5 A2M 3760 N6 8g5y #5/S2 G 1826 C8 0.152 3.248
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 C8 0.148 3.492
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C8 0.147 3.493
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 C6 0.144 3.106
8g5y #5/L5 A 3759 N6 8g5y #5/S2 G 1709 C5' 0.138 3.382
8g60 #6/S2 G 1829 C4' 8g60 #6/S2 G 1059 N2 0.133 3.387
8g5y #5/S2 G 1709 C4' 8g5y #5/L5 A 3759 N6 0.129 3.391
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 N1 0.128 2.572
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 N1 0.127 2.933
8g6j #9/S2 G 1829 C4' 8g6j #9/S2 G 1059 N2 0.125 3.395
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 C4' 0.121 3.639
8g60 #6/L5 A2M 3760 N1 8g60 #6/S2 G 1826 P 0.120 3.620
8g61 #8/L5 A2M 3760 CM' 8g61 #8/S2 G 1826 O4' 0.120 3.220
8g61 #8/S2 C 1710 C4' 8g61 #8/L5 PSU 3762 O2 0.119 3.181
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 N6 0.118 3.402
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 O2' 0.116 3.224
8g5y #5/L5 A 3759 N1 8g5y #5/S2 C 1708 C2' 0.114 3.406
8g60 #6/S2 G 1826 O2' 8g60 #6/L5 A 3759 O2' 0.110 2.410
8g5z #7/S2 G 1826 C1' 8g5z #7/L5 A2M 3760 CM' 0.108 3.652
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 N1 0.102 2.598
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 O2' 0.100 3.240
8g60 #6/L5 A 3759 N6 8g60 #6/S2 G 1709 C5' 0.099 3.421
8g6j #9/L5 A2M 3760 N7 8g6j #9/S2 G 1826 C5' 0.099 3.421
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 N1 0.096 2.604
8g61 #8/S2 C 1708 N3 8g61 #8/S2 G 1826 N1 0.093 2.787
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 C4' 0.087 3.673
8g5z #7/L5 A2M 3760 N7 8g5z #7/S2 G 1826 C5' 0.086 3.434
8g60 #6/L5 A 3766 O3' 8g60 #6/S2 G 1849 C1' 0.085 3.255
8g61 #8/L5 A2M 3760 C6 8g61 #8/S2 G 1826 C5' 0.084 3.406
8g5z #7/L5 A2M 3760 C8 8g5z #7/S2 G 1826 C4' 0.082 3.558
8g5y #5/L5 A 3759 O2' 8g5y #5/S2 G 1826 C2' 0.079 3.261
8g6j #9/S2 U 1707 C1' 8g6j #9/S2 MA6 1850 C4' 0.075 3.685
8g61 #8/S2 G 1829 C4' 8g61 #8/S2 G 1059 N2 0.069 3.451
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 C2 0.068 3.152
8g5y #5/S2 G 1849 C8 8g5y #5/L5 C 3767 OP1 0.062 3.118
8g6j #9/S2 G 1709 C4' 8g6j #9/L5 A 3759 N6 0.060 3.460
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 N6 0.058 3.462
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 N1 0.057 2.643
8g61 #8/L5 PSU 3762 O2 8g61 #8/S2 C 1710 C5' 0.051 3.249
8g6j #9/L5 A2M 3760 C5 8g6j #9/S2 G 1826 C5' 0.051 3.439
8g5y #5/L5 A 3766 O3' 8g5y #5/S2 G 1849 C1' 0.051 3.289
8g61 #8/S2 C 1708 O2 8g61 #8/S2 G 1826 N2 0.046 2.614
8g60 #6/L5 A2M 3760 C6 8g60 #6/S2 G 1826 C8 0.043 3.327
8g5z #7/L5 A2M 3760 C5 8g5z #7/S2 G 1826 C5' 0.039 3.451
8g61 #8/L5 A 3759 N1 8g61 #8/S2 C 1708 C2' 0.038 3.482
8g6j #9/S2 G 1849 C8 8g6j #9/L5 C 3767 OP1 0.038 3.142
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 C2 0.038 3.182
8g5z #7/S2 G 1849 C8 8g5z #7/L5 C 3767 OP1 0.038 3.142
8g6j #9/S2 C 1708 O2 8g6j #9/L5 A 3759 C2 0.038 3.142
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 N1 0.034 2.666
8g60 #6/L5 A 3759 N1 8g60 #6/S2 C 1708 C2' 0.034 3.486
8g60 #6/S2 G 1849 N3 8g60 #6/L5 A 3766 O2' 0.032 2.668
8g5z #7/L5 A 3759 N6 8g5z #7/S2 G 1709 C5' 0.032 3.488
8g6j #9/L5 A 3766 O3' 8g6j #9/S2 G 1849 C1' 0.032 3.308
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A2M 3760 CM' 0.031 3.729
8g5z #7/L5 A 3766 O3' 8g5z #7/S2 G 1849 C1' 0.031 3.309
8g60 #6/S2 C 1708 O2 8g60 #6/L5 A 3759 C2 0.029 3.151
8g6j #9/S2 G 1849 N3 8g6j #9/L5 A 3766 O2' 0.025 2.675
8g5y #5/L5 PSU 3762 O2 8g5y #5/S2 C 1710 C5' 0.025 3.275
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 O2' 0.025 2.675
8g5y #5/S2 C 1708 N3 8g5y #5/S2 G 1826 N1 0.024 2.856
8g5y #5/S2 C 1710 C4' 8g5y #5/L5 PSU 3762 O2 0.023 3.277
8g61 #8/L5 C 3767 P 8g61 #8/S2 G 1849 C1' 0.023 3.957
8g60 #6/S2 C 1828 C4' 8g60 #6/L5 C 3767 O2' 0.019 3.321
8g6j #9/S2 G 1709 N1 8g6j #9/S2 G 1826 C6 0.018 3.232
8g5z #7/S2 G 1709 C4' 8g5z #7/L5 A 3759 N6 0.017 3.503
8g61 #8/S2 MA6 1850 C4' 8g61 #8/S2 U 1707 C4' 0.016 3.744
8g6j #9/L5 A 3759 N6 8g6j #9/S2 G 1709 C5' 0.016 3.504
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 N7 0.014 3.506
8g5y #5/L5 A2M 3760 N3 8g5y #5/S2 G 1826 C5' 0.010 3.510
8g61 #8/S2 G 1849 C1' 8g61 #8/L5 C 3767 OP1 0.008 3.292
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 N1 0.007 2.693
8g6j #9/S2 G 1849 N3 8g6j #9/L5 A 3766 C2' 0.002 3.518
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 C2' 0.002 3.518
8g6j #9/S2 C 1708 O2' 8g6j #9/L5 A 3759 N1 0.001 2.699
8g6j #9/S2 C 1710 C4' 8g6j #9/L5 PSU 3762 O2 -0.001 3.301
8g60 #6/L5 A2M 3760 C5 8g60 #6/S2 G 1826 O4' -0.004 3.074
8g6j #9/L5 PSU 3762 O2 8g6j #9/S2 C 1710 C5' -0.005 3.305
8g61 #8/L5 A 3766 O3' 8g61 #8/S2 G 1849 C1' -0.005 3.345
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C6 -0.005 3.075
8g6j #9/L5 A 3759 N1 8g6j #9/S2 C 1708 C2' -0.011 3.531
8g60 #6/L5 A2M 3760 C2 8g60 #6/S2 G 1826 P -0.011 3.871
8g60 #6/S2 MA6 1850 C10 8g60 #6/S2 G 1059 N2 -0.013 3.533
8g60 #6/S2 C 1710 C4' 8g60 #6/L5 PSU 3762 O2 -0.014 3.314
8g5z #7/L5 A 3759 N1 8g5z #7/S2 C 1708 C2' -0.018 3.538
8g60 #6/S2 G 1829 O3' 8g60 #6/S2 G 1059 N2 -0.019 2.719
8g5y #5/L5 C 3767 P 8g5y #5/S2 G 1849 C1' -0.020 4.000
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O2' -0.020 2.720
8g6j #9/S2 G 1826 O2' 8g6j #9/L5 A 3759 O2' -0.021 2.541
8g60 #6/S2 G 1059 N1 8g60 #6/S2 U 1830 OP1 -0.022 2.682
8g60 #6/S2 G 1826 N1 8g60 #6/S2 C 1708 N3 -0.022 2.902
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 OP1 -0.026 3.086
8g5y #5/L5 A2M 3760 C5 8g5y #5/S2 G 1826 O4' -0.026 3.096
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 C2 -0.027 3.247
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C5 -0.032 3.102
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 N1 -0.037 3.137
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 OP1 -0.041 3.101
8g6j #9/L5 A 3759 O2' 8g6j #9/S2 G 1826 C2' -0.041 3.381
8g5z #7/L5 A 3759 C4' 8g5z #7/S2 U 1827 C4' -0.042 3.802
8g5y #5/S2 G 1059 N2 8g5y #5/S2 U 1830 P -0.042 3.782
8g6j #9/L5 C 3767 P 8g6j #9/S2 G 1849 C1' -0.042 4.022
8g5z #7/L5 C 3767 P 8g5z #7/S2 G 1849 C1' -0.042 4.022
8g5y #5/S2 U 1830 P 8g5y #5/S2 G 1059 N1 -0.043 3.783
8g6j #9/S2 G 1826 C1' 8g6j #9/L5 A2M 3760 CM' -0.043 3.803
8g5y #5/S2 C 1708 O2 8g5y #5/S2 G 1826 N2 -0.044 2.704
8g61 #8/S2 C 1708 O2 8g61 #8/L5 A 3759 C2 -0.045 3.225
8g5y #5/S2 U 1827 O2 8g5y #5/L5 A 3766 C2 -0.047 3.227
8g60 #6/S2 G 1059 N2 8g60 #6/S2 U 1830 P -0.048 3.788
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 OP1 -0.049 3.109
8g6j #9/S2 G 1829 C3' 8g6j #9/S2 G 1059 N2 -0.050 3.570
8g5y #5/S2 C 1708 O2 8g5y #5/L5 A 3759 C2 -0.050 3.230
8g5y #5/S2 G 1829 O3' 8g5y #5/S2 G 1059 N2 -0.051 2.751
8g61 #8/L5 A 3759 O2' 8g61 #8/S2 G 1826 C2' -0.052 3.392
8g5y #5/S2 MA6 1850 C10 8g5y #5/S2 G 1059 N2 -0.053 3.573
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 C2 -0.054 3.274
8g60 #6/S2 G 1829 C3' 8g60 #6/S2 G 1059 N2 -0.055 3.575
8g6j #9/S2 G 1849 N9 8g6j #9/L5 C 3767 OP1 -0.057 3.117
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 OP1 -0.057 3.117
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 N1 -0.061 2.761
8g6j #9/S2 U 1827 O2' 8g6j #9/L5 A 3766 N1 -0.062 2.762
8g5y #5/S2 MA6 1850 C1' 8g5y #5/S2 U 1707 C1' -0.063 3.823
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 N3 -0.064 3.584
8g6j #9/L5 A 3759 C4' 8g6j #9/S2 U 1827 C4' -0.064 3.824
8g5y #5/L5 A2M 3760 C2 8g5y #5/S2 G 1826 O5' -0.065 3.285
8g6j #9/L5 C 3767 O2' 8g6j #9/S2 C 1828 C4' -0.067 3.407
8g5z #7/L5 C 3767 O2' 8g5z #7/S2 C 1828 C4' -0.067 3.407
8g60 #6/S2 C 1708 O2 8g60 #6/S2 G 1826 N2 -0.067 2.727
8g6j #9/S2 U 1707 O2 8g6j #9/S2 G 1849 N2 -0.069 2.729
8g6j #9/S2 G 1709 N3 8g6j #9/S2 G 1826 C2 -0.072 3.322
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 C2 -0.074 3.294
8g61 #8/S2 G 1849 P 8g61 #8/S2 U 1061 N3 -0.074 3.814
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 C2' -0.076 3.596
8g5y #5/L5 A 3759 C4' 8g5y #5/S2 U 1827 C4' -0.077 3.837
8g6j #9/S2 U 1830 P 8g6j #9/S2 G 1059 N1 -0.081 3.821
8g5z #7/L5 PSU 3762 O2 8g5z #7/S2 C 1710 C5' -0.082 3.382
8g6j #9/S2 G 1826 N1 8g6j #9/S2 C 1708 N3 -0.083 2.963
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 N1 -0.083 3.333
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C8 -0.084 3.724
8g5z #7/S2 C 1708 O2 8g5z #7/L5 A 3759 C2 -0.085 3.265
8g6j #9/S2 U 1827 O4' 8g6j #9/L5 A 3759 O4' -0.086 3.006
8g61 #8/S2 G 1826 O2' 8g61 #8/L5 A 3759 O2' -0.091 2.611
8g5y #5/S2 G 1826 C6 8g5y #5/S2 G 1709 C6 -0.091 3.311
8g61 #8/S2 G 1849 C8 8g61 #8/L5 C 3767 OP1 -0.091 3.271
8g5y #5/L5 A 3766 C1' 8g5y #5/S2 C 1708 O2' -0.096 3.436
8g60 #6/L5 A 3766 C2' 8g60 #6/S2 G 1849 N3 -0.096 3.616
8g6j #9/L5 A 3759 N3 8g6j #9/S2 G 1826 N2 -0.096 2.976
8g61 #8/S2 MA6 1850 O2' 8g61 #8/S2 U 1707 O4' -0.098 2.618
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 C6 -0.099 3.169
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 N1 -0.100 3.350
8g5y #5/S2 G 1849 N3 8g5y #5/L5 A 3766 O2' -0.102 2.802
8g5z #7/S2 C 1710 C4' 8g5z #7/L5 PSU 3762 O2 -0.103 3.403
8g60 #6/S2 U 1707 O2 8g60 #6/S2 G 1849 N2 -0.103 2.763
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 C6 -0.103 3.353
8g60 #6/S2 MA6 1850 C1' 8g60 #6/S2 U 1707 C1' -0.106 3.866
8g6j #9/S2 G 1709 N2 8g6j #9/S2 G 1826 C4 -0.107 3.357
8g60 #6/L5 A2M 3760 C4 8g60 #6/S2 G 1826 O4' -0.107 3.177
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A 3759 O2' -0.109 3.449
8g5y #5/L5 A2M 3760 C4 8g5y #5/S2 G 1826 O4' -0.109 3.179
8g61 #8/S2 MA6 1850 C10 8g61 #8/S2 G 1059 N2 -0.110 3.630
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 C6 -0.110 3.360
8g6j #9/S2 G 1829 O3' 8g6j #9/S2 G 1059 N2 -0.110 2.810
8g60 #6/L5 C 3767 P 8g60 #6/S2 G 1849 C1' -0.113 4.093
8g6j #9/L5 A 3766 C2 8g6j #9/S2 U 1827 O2 -0.114 3.294
8g5y #5/S2 G 1709 C5 8g5y #5/S2 G 1826 N1 -0.114 3.364
8g5z #7/S2 U 1827 O2 8g5z #7/L5 A 3766 C2 -0.114 3.294
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 N1 -0.117 3.397
8g5y #5/L5 C 3767 OP1 8g5y #5/S2 G 1849 C1' -0.118 3.418
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 C6 -0.120 3.190
8g5y #5/S2 MA6 1850 O4' 8g5y #5/S2 U 1707 C1' -0.122 3.462
8g5y #5/S2 G 1829 C4' 8g5y #5/S2 G 1059 N2 -0.123 3.643
8g61 #8/S2 U 1707 O4' 8g61 #8/S2 MA6 1850 C4' -0.128 3.468
8g60 #6/L5 A 3766 N1 8g60 #6/S2 U 1827 C2' -0.129 3.649
8g6j #9/S2 G 1709 O4' 8g6j #9/L5 A 3759 C6 -0.130 3.200
8g5z #7/L5 C 3767 OP1 8g5z #7/S2 G 1849 C1' -0.131 3.431
8g6j #9/L5 C 3767 OP1 8g6j #9/S2 G 1849 C1' -0.131 3.431
8g5y #5/L5 A 3759 C6 8g5y #5/S2 G 1709 C4' -0.131 3.621
8g5z #7/L5 A2M 3760 C6 8g5z #7/S2 G 1826 C5' -0.133 3.623
8g5y #5/S2 U 1707 O4' 8g5y #5/S2 MA6 1850 C4' -0.134 3.474
8g61 #8/L5 A2M 3760 N6 8g61 #8/S2 G 1826 C5' -0.134 3.654
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3766 C1' -0.135 3.475
8g5y #5/S2 U 1830 OP1 8g5y #5/S2 G 1059 N1 -0.138 2.798
8g5z #7/L5 A2M 3760 N6 8g5z #7/S2 G 1826 C5' -0.138 3.658
8g61 #8/S2 U 1827 O4 8g61 #8/S2 U 1707 O4 -0.141 2.981
8g6j #9/L5 A 3759 O4' 8g6j #9/S2 U 1827 C4' -0.141 3.481
8g5y #5/S2 G 1826 C8 8g5y #5/L5 A2M 3760 C6 -0.141 3.511
8g61 #8/S2 C 1708 C1' 8g61 #8/L5 A 3766 C1' -0.142 3.902
8g6j #9/S2 MA6 1850 C10 8g6j #9/S2 G 1059 N2 -0.145 3.665
8g6j #9/L5 A2M 3760 CM' 8g6j #9/S2 G 1826 O4' -0.147 3.487
8g5y #5/S2 G 1829 C3' 8g5y #5/S2 G 1059 N2 -0.147 3.667
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 C6 -0.148 3.368
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 C2 -0.150 3.370
8g61 #8/L5 A 3766 C2' 8g61 #8/S2 G 1849 N2 -0.150 3.670
8g5z #7/L5 A2M 3760 CM' 8g5z #7/S2 G 1826 O4' -0.152 3.492
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 C2 -0.154 3.224
8g61 #8/S2 U 1827 C4' 8g61 #8/L5 A 3759 C4' -0.154 3.914
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A 3759 O2' -0.155 3.495
8g60 #6/S2 U 1827 C1' 8g60 #6/L5 A 3759 N3 -0.163 3.683
8g6j #9/S2 MA6 1850 C1' 8g6j #9/S2 U 1707 C1' -0.168 3.928
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 C6 -0.168 3.658
8g6j #9/S2 U 1827 O4' 8g6j #9/L5 A 3759 C1' -0.168 3.508
8g61 #8/L5 C 3767 O2' 8g61 #8/S2 C 1828 C4' -0.170 3.510
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 O6 -0.170 3.200
8g5y #5/L5 A 3766 C2' 8g5y #5/S2 G 1849 N3 -0.174 3.694
8g60 #6/S2 U 1827 O2 8g60 #6/L5 A 3766 C2 -0.175 3.355
8g5z #7/S2 G 1826 O2' 8g5z #7/L5 A 3759 O2' -0.175 2.695
8g5z #7/L5 A 3759 O2' 8g5z #7/S2 G 1826 C2' -0.176 3.516
8g6j #9/L5 A 3766 O2' 8g6j #9/S2 G 1849 C2 -0.178 3.248
8g5z #7/L5 A 3766 O2' 8g5z #7/S2 G 1849 C2 -0.178 3.248
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C5 -0.178 3.668
8g5y #5/L5 A 3766 N1 8g5y #5/S2 U 1827 C2' -0.180 3.700
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 C6 -0.180 3.670
8g60 #6/L5 PSU 3762 O2 8g60 #6/S2 C 1710 C5' -0.181 3.481
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 C5 -0.185 3.555
8g61 #8/S2 G 1826 N2 8g61 #8/S2 C 1708 C2 -0.186 3.436
8g6j #9/S2 G 1826 N2 8g6j #9/L5 A 3759 C2 -0.188 3.588
8g60 #6/S2 G 1826 N2 8g60 #6/L5 A 3759 C2 -0.188 3.588
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 N3 -0.190 3.710
8g6j #9/S2 G 1849 N9 8g6j #9/L5 C 3767 P -0.193 3.933
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 P -0.193 3.933
8g60 #6/L5 A2M 3760 N7 8g60 #6/S2 G 1826 O4' -0.194 3.294
8g61 #8/S2 G 1709 C5 8g61 #8/S2 G 1826 N1 -0.195 3.445
8g6j #9/L5 A 3759 C6 8g6j #9/S2 G 1709 C4' -0.195 3.685
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 P -0.195 3.935
8g5y #5/S2 G 1849 C4 8g5y #5/L5 C 3767 C5' -0.199 3.689
8g5z #7/S2 G 1709 O4' 8g5z #7/L5 A 3759 C6 -0.201 3.271
8g60 #6/S2 G 1826 C6 8g60 #6/S2 G 1709 C6 -0.201 3.421
8g5z #7/L5 C 3767 C5' 8g5z #7/S2 G 1849 C5 -0.202 3.692
8g6j #9/L5 C 3767 C5' 8g6j #9/S2 G 1849 C5 -0.202 3.692
8g5y #5/L5 A 3759 C2' 8g5y #5/S2 G 1826 O2' -0.202 3.542
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 C2 -0.204 3.424
8g6j #9/S2 G 1709 N1 8g6j #9/S2 G 1826 N1 -0.204 3.484
8g5y #5/S2 G 1709 O6 8g5y #5/S2 G 1826 O6 -0.207 3.047
8g5z #7/L5 A 3759 C6 8g5z #7/S2 G 1709 C4' -0.208 3.698
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 C2 -0.208 3.428
8g6j #9/S2 G 1826 C6 8g6j #9/S2 G 1709 C6 -0.209 3.429
8g61 #8/S2 G 1826 O6 8g61 #8/S2 C 1708 N4 -0.210 2.870
8g60 #6/S2 MA6 1850 O4' 8g60 #6/S2 U 1707 C1' -0.210 3.550
8g60 #6/L5 A 3759 C1' 8g60 #6/S2 U 1827 O4' -0.213 3.553
8g60 #6/S2 C 1828 O4' 8g60 #6/L5 A 3766 C2 -0.213 3.433
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 C2 -0.218 3.438
8g6j #9/S2 U 1827 O2' 8g6j #9/L5 A 3766 C2 -0.218 3.438
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 P -0.218 3.958
8g61 #8/S2 G 1849 O5' 8g61 #8/S2 U 1061 C4 -0.221 3.291
8g5z #7/L5 A 3766 N1 8g5z #7/S2 U 1827 C2' -0.222 3.742
8g5z #7/S2 G 1849 N2 8g5z #7/L5 A 3766 C2' -0.222 3.742
8g60 #6/S2 U 1707 O4' 8g60 #6/S2 MA6 1850 C4' -0.222 3.562
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 P -0.222 3.962
8g6j #9/L5 A 3766 N1 8g6j #9/S2 U 1827 C2' -0.222 3.742
8g6j #9/L5 A2M 3760 C6 8g6j #9/S2 G 1826 C5' -0.222 3.712
8g6j #9/L5 A 3766 C2' 8g6j #9/S2 G 1849 N2 -0.223 3.743
8g61 #8/L5 A 3759 C2' 8g61 #8/S2 G 1826 O2' -0.224 3.564
8g5y #5/L5 C 3767 O2' 8g5y #5/S2 C 1828 C5' -0.226 3.566
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 C5 -0.227 3.717
8g5y #5/S2 C 1708 C1' 8g5y #5/L5 A 3766 C1' -0.231 3.991
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 O5' -0.232 3.112
8g6j #9/S2 G 1709 C5 8g6j #9/S2 G 1826 N1 -0.237 3.487
8g60 #6/L5 A 3759 C4' 8g60 #6/S2 U 1827 C4' -0.238 3.998
8g60 #6/L5 A 3759 N3 8g60 #6/S2 G 1826 N2 -0.238 3.118
8g60 #6/L5 C 3767 C5' 8g60 #6/S2 G 1849 C5 -0.238 3.728
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 C4' -0.239 3.999
8g61 #8/S2 U 1827 O2 8g61 #8/L5 A 3766 C2 -0.241 3.421
8g61 #8/S2 G 1849 C5' 8g61 #8/S2 U 1061 C4 -0.242 3.732
8g5y #5/L5 A 3766 N9 8g5y #5/S2 C 1708 O2' -0.243 3.343
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 N1 -0.243 3.493
8g60 #6/S2 G 1849 N7 8g60 #6/L5 C 3767 OP1 -0.243 3.303
8g5y #5/L5 A 3759 C2 8g5y #5/S2 C 1708 C2' -0.244 3.884
8g5z #7/S2 G 1849 C4 8g5z #7/L5 C 3767 C5' -0.244 3.734
8g6j #9/S2 G 1849 C4 8g6j #9/L5 C 3767 C5' -0.244 3.734
8g5z #7/L5 A 3759 C1' 8g5z #7/S2 U 1827 O4' -0.245 3.585
8g61 #8/L5 A 3766 C2 8g61 #8/S2 U 1827 C2' -0.247 3.887
8g6j #9/S2 C 1828 O4' 8g6j #9/L5 A 3766 C2 -0.247 3.467
8g5z #7/S2 C 1828 O4' 8g5z #7/L5 A 3766 C2 -0.248 3.468
8g61 #8/S2 G 1709 O6 8g61 #8/S2 G 1826 O6 -0.249 3.089
8g60 #6/S2 G 1709 C5 8g60 #6/S2 G 1826 N1 -0.250 3.500
8g61 #8/S2 MA6 1850 C1' 8g61 #8/S2 U 1707 C1' -0.251 4.011
8g6j #9/S2 G 1059 N2 8g6j #9/S2 U 1830 P -0.251 3.991
8g6j #9/S2 U 1707 O4' 8g6j #9/S2 MA6 1850 C4' -0.251 3.591
8g6j #9/S2 G 1826 C5 8g6j #9/S2 G 1709 N1 -0.251 3.501
8g6j #9/S2 G 1709 C6 8g6j #9/S2 G 1826 N1 -0.252 3.502
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 N1 -0.254 3.504
8g61 #8/S2 G 1849 N2 8g61 #8/S2 U 1707 O2 -0.254 2.914
8g5y #5/L5 A 3766 C2 8g5y #5/S2 U 1827 C2' -0.254 3.894
8g6j #9/S2 G 1849 C6 8g6j #9/L5 C 3767 C5' -0.255 3.745
8g60 #6/L5 A 3766 O2' 8g60 #6/S2 G 1849 C1' -0.255 3.595
8g5z #7/S2 G 1849 C6 8g5z #7/L5 C 3767 C5' -0.255 3.745
8g6j #9/S2 MA6 1850 O4' 8g6j #9/S2 U 1707 C1' -0.256 3.596
8g5y #5/S2 G 1826 N2 8g5y #5/S2 C 1708 C2 -0.257 3.507
8g5y #5/S2 C 1828 O4' 8g5y #5/L5 A 3766 C2 -0.258 3.478
8g60 #6/L5 A2M 3760 C8 8g60 #6/S2 G 1826 O4' -0.258 3.478
8g61 #8/L5 A 3759 C6 8g61 #8/S2 C 1708 O2' -0.261 3.331
8g61 #8/S2 G 1829 C3' 8g61 #8/S2 G 1059 N2 -0.261 3.781
8g61 #8/L5 A2M 3760 C8 8g61 #8/S2 G 1826 C5' -0.261 3.901
8g5y #5/L5 C 3767 C4' 8g5y #5/S2 C 1828 O2' -0.262 3.602
8g6j #9/S2 G 1709 C1' 8g6j #9/S2 G 1826 N2 -0.262 3.782
8g5y #5/L5 C 3767 C5' 8g5y #5/S2 G 1849 C5 -0.262 3.752
8g61 #8/S2 G 1849 C4 8g61 #8/L5 C 3767 C5' -0.263 3.753
8g6j #9/S2 G 1849 N1 8g6j #9/L5 C 3767 C5' -0.267 3.787
8g60 #6/L5 C 3767 C4' 8g60 #6/S2 C 1828 O2' -0.267 3.607
8g5z #7/S2 G 1849 N1 8g5z #7/L5 C 3767 C5' -0.267 3.787
8g60 #6/S2 G 1849 C4 8g60 #6/L5 C 3767 C5' -0.269 3.759
8g5y #5/S2 U 1707 O2 8g5y #5/S2 G 1849 N2 -0.270 2.930
8g5y #5/L5 A 3759 C1' 8g5y #5/S2 U 1827 O4' -0.270 3.610
8g60 #6/L5 A 3759 C2' 8g60 #6/S2 G 1826 O2' -0.271 3.611
8g60 #6/L5 A 3766 C2 8g60 #6/S2 U 1827 C2' -0.271 3.911
8g6j #9/L5 A 3766 C1' 8g6j #9/S2 C 1708 O2' -0.272 3.612
8g61 #8/S2 G 1709 C5' 8g61 #8/L5 A 3759 C6 -0.273 3.763
8g5z #7/L5 A 3766 C1' 8g5z #7/S2 C 1708 O2' -0.273 3.613
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C5 -0.273 3.763
8g61 #8/L5 A 3759 C2 8g61 #8/S2 C 1708 C2' -0.274 3.914
8g6j #9/S2 G 1826 O6 8g6j #9/S2 C 1708 N4 -0.274 2.934
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 N1 -0.275 3.555
8g5y #5/S2 MA6 1850 C2' 8g5y #5/S2 U 1707 C1' -0.277 4.037
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 N1 -0.278 3.378
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 C5' -0.278 3.578
8g61 #8/L5 A 3759 C3' 8g61 #8/S2 G 1826 O2' -0.278 3.618
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 N2 -0.279 3.529
8g6j #9/S2 G 1826 N2 8g6j #9/S2 C 1708 O2 -0.280 2.940
8g60 #6/S2 G 1826 N2 8g60 #6/S2 C 1708 C2 -0.282 3.532
8g5y #5/S2 G 1826 O6 8g5y #5/S2 C 1708 N4 -0.283 2.943
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N2 -0.284 3.534
8g61 #8/L5 A 3766 N1 8g61 #8/S2 U 1827 C2' -0.284 3.804
8g5y #5/S2 G 1849 N3 8g5y #5/L5 C 3767 C5' -0.285 3.805
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 N7 -0.288 3.688
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 C5 -0.290 3.780
8g61 #8/S2 U 1830 P 8g61 #8/S2 G 1059 N1 -0.290 4.030
8g6j #9/S2 G 1849 N2 8g6j #9/S2 U 1707 C2 -0.290 3.540
8g5y #5/S2 G 1826 C5 8g5y #5/S2 G 1709 N1 -0.291 3.541
8g6j #9/S2 G 1709 C2 8g6j #9/S2 G 1826 N1 -0.292 3.542
8g5z #7/L5 A 3759 N3 8g5z #7/S2 G 1826 N2 -0.294 3.174
8g60 #6/S2 MA6 1850 C4' 8g60 #6/S2 U 1707 C4' -0.295 4.055
8g61 #8/S2 G 1849 N3 8g61 #8/L5 C 3767 C5' -0.297 3.817
8g6j #9/S2 C 1708 O2' 8g6j #9/L5 A 3759 C2 -0.297 3.517
8g60 #6/S2 G 1849 N2 8g60 #6/S2 U 1707 C2 -0.299 3.549
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O3' -0.299 3.399
8g6j #9/S2 G 1709 N3 8g6j #9/S2 G 1826 N3 -0.301 3.581
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 N2 -0.304 3.004
8g60 #6/L5 A 3759 C6 8g60 #6/S2 C 1708 O2' -0.305 3.375
8g60 #6/L5 C 3767 OP1 8g60 #6/S2 G 1849 C1' -0.306 3.606
8g6j #9/S2 MA6 1850 C2' 8g6j #9/S2 U 1707 C1' -0.307 4.067
8g5y #5/L5 A2M 3760 N1 8g5y #5/S2 G 1826 O5' -0.307 3.407
8g61 #8/L5 A 3759 N3 8g61 #8/S2 G 1826 N2 -0.307 3.187
8g5y #5/S2 G 1709 N9 8g5y #5/S2 G 1826 N2 -0.308 3.588
8g6j #9/S2 U 1830 OP1 8g6j #9/S2 G 1059 N1 -0.309 2.969
8g5z #7/S2 U 1827 O4' 8g5z #7/L5 A 3759 O4' -0.310 3.230
8g5y #5/L5 A 3759 N3 8g5y #5/S2 U 1827 C1' -0.310 3.830
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 O6 -0.312 3.342
8g60 #6/S2 G 1826 O6 8g60 #6/S2 C 1708 N4 -0.312 2.972
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 C2 -0.315 3.535
8g60 #6/S2 G 1849 C5' 8g60 #6/S2 U 1061 O4 -0.316 3.616
8g60 #6/L5 C 3767 O2' 8g60 #6/S2 C 1828 C5' -0.316 3.656
8g6j #9/S2 G 1709 N9 8g6j #9/S2 G 1826 N2 -0.316 3.596
8g60 #6/S2 G 1849 C2 8g60 #6/L5 A 3766 O2' -0.317 3.387
8g61 #8/L5 A 3759 C1' 8g61 #8/S2 U 1827 O4' -0.318 3.658
8g5z #7/L5 A 3759 O4' 8g5z #7/S2 U 1827 C4' -0.318 3.658
8g6j #9/S2 G 1826 C2 8g6j #9/S2 G 1709 C2 -0.319 3.539
8g60 #6/S2 G 1709 O6 8g60 #6/S2 G 1826 O6 -0.321 3.161
8g60 #6/S2 MA6 1850 C2' 8g60 #6/S2 U 1707 C1' -0.321 4.081
8g6j #9/S2 U 1827 O2 8g6j #9/S2 C 1708 O2 -0.321 3.161
8g60 #6/S2 U 1827 O4 8g60 #6/S2 U 1707 O4 -0.322 3.162
8g60 #6/S2 G 1849 C6 8g60 #6/L5 C 3767 C5' -0.322 3.812
8g60 #6/L5 A2M 3760 N9 8g60 #6/S2 G 1826 O4' -0.324 3.424
8g5y #5/S2 G 1849 N2 8g5y #5/S2 U 1707 C2 -0.324 3.574
8g5y #5/L5 A2M 3760 C6 8g5y #5/S2 G 1826 O4' -0.324 3.394
8g61 #8/L5 A2M 3760 C4 8g61 #8/S2 G 1826 C5' -0.325 3.815
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 C6 -0.327 3.547
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 O6 -0.328 3.358
8g6j #9/S2 G 1826 N9 8g6j #9/S2 G 1709 N2 -0.329 3.609
8g6j #9/L5 A 3759 C2' 8g6j #9/S2 G 1826 O2' -0.330 3.670
8g6j #9/S2 G 1709 C6 8g6j #9/S2 G 1826 O6 -0.331 3.361
8g6j #9/S2 G 1826 C4 8g6j #9/S2 G 1709 C2 -0.331 3.551
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 P -0.331 4.191
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 O4' -0.333 3.673
8g61 #8/S2 G 1826 N1 8g61 #8/S2 C 1708 C2 -0.333 3.583
8g5y #5/S2 MA6 1850 O2' 8g5y #5/S2 U 1707 O4' -0.337 2.857
8g6j #9/L5 C 3767 C4' 8g6j #9/S2 C 1828 O2' -0.337 3.677
8g5z #7/L5 C 3767 C4' 8g5z #7/S2 C 1828 O2' -0.338 3.678
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 N1 -0.338 3.618
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 C2 -0.339 3.559
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 N1 -0.340 3.440
8g61 #8/S2 U 1827 C1' 8g61 #8/L5 A 3759 N3 -0.340 3.860
8g5y #5/S2 G 1826 C2 8g5y #5/S2 G 1709 N3 -0.341 3.591
8g6j #9/S2 G 1826 N3 8g6j #9/S2 G 1709 C2 -0.341 3.591
8g61 #8/S2 G 1826 C5 8g61 #8/S2 G 1709 N1 -0.342 3.592
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A2M 3760 C5 -0.342 3.832
8g60 #6/S2 G 1826 C5' 8g60 #6/L5 A2M 3760 C2 -0.344 3.984
8g5y #5/S2 G 1826 C4' 8g5y #5/L5 A2M 3760 N3 -0.344 3.864
8g61 #8/L5 C 3767 C5' 8g61 #8/S2 G 1849 C5 -0.346 3.836
8g6j #9/S2 C 1708 C1' 8g6j #9/L5 A 3766 C1' -0.348 4.108
8g61 #8/S2 G 1849 C2 8g61 #8/L5 C 3767 C5' -0.348 3.838
8g5z #7/S2 C 1708 C1' 8g5z #7/L5 A 3766 C1' -0.348 4.108
8g6j #9/L5 A2M 3760 N6 8g6j #9/S2 G 1826 C5' -0.351 3.871
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 C1' -0.352 4.112
8g6j #9/S2 MA6 1850 C4' 8g6j #9/S2 U 1707 C4' -0.353 4.113
8g61 #8/L5 A 3759 C4' 8g61 #8/S2 G 1826 O2' -0.353 3.693
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 N1 -0.353 3.603
8g61 #8/L5 A 3766 C1' 8g61 #8/S2 C 1708 C4' -0.354 4.114
8g61 #8/S2 C 1828 O4' 8g61 #8/L5 A 3766 C2 -0.354 3.574
8g61 #8/S2 MA6 1850 C2' 8g61 #8/S2 U 1707 O4' -0.355 3.695
8g61 #8/L5 A 3759 C5 8g61 #8/S2 G 1709 C4' -0.355 3.845
8g5y #5/S2 U 1827 C1' 8g5y #5/L5 A 3759 C1' -0.355 4.115
8g5y #5/S2 G 1849 C5' 8g5y #5/S2 U 1061 O4 -0.357 3.657
8g61 #8/S2 G 1709 C4 8g61 #8/S2 G 1826 N1 -0.359 3.609
8g60 #6/S2 G 1826 C5 8g60 #6/S2 G 1709 N1 -0.359 3.609
8g60 #6/S2 G 1849 N1 8g60 #6/L5 C 3767 C5' -0.359 3.879
8g5y #5/L5 A 3766 O2' 8g5y #5/S2 G 1849 C2 -0.359 3.429
8g5y #5/S2 G 1826 N2 8g5y #5/L5 A 3759 C2 -0.360 3.760
8g5z #7/L5 A 3759 C2 8g5z #7/S2 C 1708 C2' -0.360 4.000
8g5z #7/S2 G 1849 N3 8g5z #7/L5 C 3767 C5' -0.361 3.881
8g6j #9/S2 G 1849 N3 8g6j #9/L5 C 3767 C5' -0.362 3.882
8g6j #9/S2 G 1709 N2 8g6j #9/S2 G 1826 C5 -0.362 3.612
8g61 #8/S2 G 1849 N1 8g61 #8/L5 C 3767 C5' -0.364 3.884
8g6j #9/L5 A 3759 C4 8g6j #9/S2 G 1826 N2 -0.365 3.615
8g5y #5/S2 G 1849 N1 8g5y #5/L5 C 3767 C5' -0.365 3.885
8g5y #5/S2 MA6 1850 C4' 8g5y #5/S2 U 1707 C4' -0.366 4.126
8g5y #5/S2 G 1849 C2 8g5y #5/L5 C 3767 C5' -0.366 3.856
8g61 #8/S2 G 1709 N2 8g61 #8/S2 G 1826 C5 -0.366 3.616
8g6j #9/S2 MA6 1850 O2' 8g6j #9/S2 U 1707 O4' -0.366 2.886
8g61 #8/S2 U 1827 O4' 8g61 #8/L5 A 3759 C4' -0.369 3.709
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A 3759 O2' -0.369 3.709
8g5z #7/S2 G 1849 C2 8g5z #7/L5 C 3767 C5' -0.373 3.863
8g6j #9/S2 G 1849 C2 8g6j #9/L5 C 3767 C5' -0.373 3.863
8g61 #8/S2 G 1709 N3 8g61 #8/S2 G 1826 C2 -0.374 3.624
8g6j #9/S2 G 1709 C2 8g6j #9/S2 G 1826 C5 -0.375 3.595
8g5y #5/S2 U 1707 N1 8g5y #5/S2 MA6 1850 O2' -0.375 3.475
8g6j #9/L5 A 3759 C1' 8g6j #9/S2 G 1826 N2 -0.375 3.895
8g61 #8/L5 C 3767 OP1 8g61 #8/S2 G 1849 O4' -0.375 3.255
8g60 #6/S2 MA6 1850 O2' 8g60 #6/S2 U 1707 O4' -0.377 2.897
8g5y #5/L5 A2M 3760 N7 8g5y #5/S2 G 1826 C1' -0.377 3.897
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 C1' -0.381 4.141
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 C2 -0.382 3.562
8g61 #8/S2 G 1826 N2 8g61 #8/L5 A 3759 C2 -0.382 3.782
8g5z #7/L5 A 3766 C2 8g5z #7/S2 U 1827 C2' -0.383 4.023
8g6j #9/L5 A 3766 C2 8g6j #9/S2 U 1827 C2' -0.383 4.023
8g60 #6/L5 A 3759 C2 8g60 #6/S2 C 1708 C2' -0.383 4.023
8g5z #7/S2 G 1826 N2 8g5z #7/L5 A 3759 C2 -0.383 3.783
8g6j #9/S2 G 1709 O4' 8g6j #9/L5 A 3759 N1 -0.384 3.484
8g6j #9/S2 U 1827 O4 8g6j #9/S2 U 1707 O4 -0.384 3.224
8g6j #9/L5 A 3766 N9 8g6j #9/S2 C 1708 O2' -0.385 3.485
8g5z #7/L5 A 3766 N9 8g5z #7/S2 C 1708 O2' -0.385 3.485
8g60 #6/S2 G 1826 N9 8g60 #6/L5 A2M 3760 N7 -0.386 3.666
8g60 #6/S2 U 1830 OP1 8g60 #6/S2 G 1059 C6 -0.386 3.416
8g61 #8/S2 G 1826 C2 8g61 #8/S2 C 1708 N3 -0.386 3.636
8g61 #8/S2 G 1826 C6 8g61 #8/S2 C 1708 N3 -0.387 3.637
8g5z #7/L5 A 3766 C2' 8g5z #7/S2 G 1849 C2 -0.387 3.877
8g6j #9/L5 A 3766 C2' 8g6j #9/S2 G 1849 C2 -0.387 3.877
8g61 #8/L5 A 3766 N9 8g61 #8/S2 C 1708 O2' -0.387 3.487
8g60 #6/S2 G 1826 C2 8g60 #6/S2 G 1709 N3 -0.388 3.638
8g6j #9/L5 A 3759 C2 8g6j #9/S2 C 1708 C2' -0.388 4.028
8g5y #5/S2 G 1826 O4' 8g5y #5/L5 A2M 3760 N3 -0.390 3.490
8g6j #9/L5 A 3759 C5 8g6j #9/S2 G 1709 O4' -0.390 3.460
8g6j #9/L5 A2M 3760 C8 8g6j #9/S2 G 1826 C5' -0.390 4.030
8g5y #5/S2 G 1849 C6 8g5y #5/L5 C 3767 C5' -0.393 3.883
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N1 -0.393 3.643
8g5y #5/S2 G 1826 N1 8g5y #5/S2 C 1708 C2 -0.400 3.650
470 contacts
> select clear
> hide #!9 models
> hide #!8 models
> hide #!7 models
> hide #!6 models
> select #5-9/L5:3765-3768, 3759-3760, 3762
750 atoms, 825 bonds, 35 residues, 5 models selected
> color (#!5 & sel) forest green
> select #5-9/S2:1707-1710, 1826-1830, 1849-1850, 1059-1061
1505 atoms, 1660 bonds, 172 pseudobonds, 70 residues, 11 models selected
> color (#!5 & sel) light sea green
> select clear
> show #!6 models
> show #!7 models
> show #!8 models
Drag select of 1803 atoms, 383 pseudobonds, 1988 bonds
> ui tool show Distances
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
361 contacts
atom1 atom2 overlap distance
8g60 #6/L5 A2M 3760 N6 8g60 #6/S2 G 1826 C8 0.368 3.032
8g61 #8/L5 A2M 3760 C5 8g61 #8/S2 G 1826 C5' 0.318 3.172
8g61 #8/L5 A 3759 N6 8g61 #8/S2 G 1709 C5' 0.300 3.220
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 N7 0.270 3.250
8g5y #5/S2 G 1826 O2' 8g5y #5/L5 A 3759 O2' 0.266 2.254
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 N7 0.249 3.271
8g61 #8/L5 A2M 3760 N7 8g61 #8/S2 G 1826 C5' 0.240 3.280
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 OP1 0.230 2.950
8g60 #6/L5 A 3759 O2' 8g60 #6/S2 G 1826 C2' 0.206 3.134
8g60 #6/S2 U 1830 P 8g60 #6/S2 G 1059 N1 0.195 3.545
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 N1 0.188 2.512
8g5y #5/S2 G 1826 C5' 8g5y #5/L5 A2M 3760 C2 0.169 3.471
8g5y #5/S2 C 1828 C4' 8g5y #5/L5 C 3767 O2' 0.167 3.173
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 O2' 0.153 3.187
8g5y #5/L5 A2M 3760 N6 8g5y #5/S2 G 1826 C8 0.152 3.248
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C8 0.147 3.493
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 C6 0.144 3.106
8g5y #5/L5 A 3759 N6 8g5y #5/S2 G 1709 C5' 0.138 3.382
8g60 #6/S2 G 1829 C4' 8g60 #6/S2 G 1059 N2 0.133 3.387
8g5y #5/S2 G 1709 C4' 8g5y #5/L5 A 3759 N6 0.129 3.391
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 N1 0.128 2.572
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 N1 0.127 2.933
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 C4' 0.121 3.639
8g60 #6/L5 A2M 3760 N1 8g60 #6/S2 G 1826 P 0.120 3.620
8g61 #8/L5 A2M 3760 CM' 8g61 #8/S2 G 1826 O4' 0.120 3.220
8g61 #8/S2 C 1710 C4' 8g61 #8/L5 PSU 3762 O2 0.119 3.181
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 N6 0.118 3.402
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 O2' 0.116 3.224
8g5y #5/L5 A 3759 N1 8g5y #5/S2 C 1708 C2' 0.114 3.406
8g60 #6/S2 G 1826 O2' 8g60 #6/L5 A 3759 O2' 0.110 2.410
8g5z #7/S2 G 1826 C1' 8g5z #7/L5 A2M 3760 CM' 0.108 3.652
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 N1 0.102 2.598
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 O2' 0.100 3.240
8g60 #6/L5 A 3759 N6 8g60 #6/S2 G 1709 C5' 0.099 3.421
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 N1 0.096 2.604
8g61 #8/S2 C 1708 N3 8g61 #8/S2 G 1826 N1 0.093 2.787
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 C4' 0.087 3.673
8g5z #7/L5 A2M 3760 N7 8g5z #7/S2 G 1826 C5' 0.086 3.434
8g60 #6/L5 A 3766 O3' 8g60 #6/S2 G 1849 C1' 0.085 3.255
8g61 #8/L5 A2M 3760 C6 8g61 #8/S2 G 1826 C5' 0.084 3.406
8g5z #7/L5 A2M 3760 C8 8g5z #7/S2 G 1826 C4' 0.082 3.558
8g5y #5/L5 A 3759 O2' 8g5y #5/S2 G 1826 C2' 0.079 3.261
8g61 #8/S2 G 1829 C4' 8g61 #8/S2 G 1059 N2 0.069 3.451
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 C2 0.068 3.152
8g5y #5/S2 G 1849 C8 8g5y #5/L5 C 3767 OP1 0.062 3.118
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 N6 0.058 3.462
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 N1 0.057 2.643
8g61 #8/L5 PSU 3762 O2 8g61 #8/S2 C 1710 C5' 0.051 3.249
8g5y #5/L5 A 3766 O3' 8g5y #5/S2 G 1849 C1' 0.051 3.289
8g61 #8/S2 C 1708 O2 8g61 #8/S2 G 1826 N2 0.046 2.614
8g60 #6/L5 A2M 3760 C6 8g60 #6/S2 G 1826 C8 0.043 3.327
8g5z #7/L5 A2M 3760 C5 8g5z #7/S2 G 1826 C5' 0.039 3.451
8g61 #8/L5 A 3759 N1 8g61 #8/S2 C 1708 C2' 0.038 3.482
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 C2 0.038 3.182
8g5z #7/S2 G 1849 C8 8g5z #7/L5 C 3767 OP1 0.038 3.142
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 N1 0.034 2.666
8g60 #6/L5 A 3759 N1 8g60 #6/S2 C 1708 C2' 0.034 3.486
8g60 #6/S2 G 1849 N3 8g60 #6/L5 A 3766 O2' 0.032 2.668
8g5z #7/L5 A 3759 N6 8g5z #7/S2 G 1709 C5' 0.032 3.488
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A2M 3760 CM' 0.031 3.729
8g5z #7/L5 A 3766 O3' 8g5z #7/S2 G 1849 C1' 0.031 3.309
8g60 #6/S2 C 1708 O2 8g60 #6/L5 A 3759 C2 0.029 3.151
8g5y #5/L5 PSU 3762 O2 8g5y #5/S2 C 1710 C5' 0.025 3.275
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 O2' 0.025 2.675
8g5y #5/S2 C 1708 N3 8g5y #5/S2 G 1826 N1 0.024 2.856
8g5y #5/S2 C 1710 C4' 8g5y #5/L5 PSU 3762 O2 0.023 3.277
8g61 #8/L5 C 3767 P 8g61 #8/S2 G 1849 C1' 0.023 3.957
8g60 #6/S2 C 1828 C4' 8g60 #6/L5 C 3767 O2' 0.019 3.321
8g5z #7/S2 G 1709 C4' 8g5z #7/L5 A 3759 N6 0.017 3.503
8g61 #8/S2 MA6 1850 C4' 8g61 #8/S2 U 1707 C4' 0.016 3.744
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 N7 0.014 3.506
8g5y #5/L5 A2M 3760 N3 8g5y #5/S2 G 1826 C5' 0.010 3.510
8g61 #8/S2 G 1849 C1' 8g61 #8/L5 C 3767 OP1 0.008 3.292
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 N1 0.007 2.693
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 C2' 0.002 3.518
8g60 #6/L5 A2M 3760 C5 8g60 #6/S2 G 1826 O4' -0.004 3.074
8g61 #8/L5 A 3766 O3' 8g61 #8/S2 G 1849 C1' -0.005 3.345
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C6 -0.005 3.075
8g60 #6/L5 A2M 3760 C2 8g60 #6/S2 G 1826 P -0.011 3.871
8g60 #6/S2 MA6 1850 C10 8g60 #6/S2 G 1059 N2 -0.013 3.533
8g60 #6/S2 C 1710 C4' 8g60 #6/L5 PSU 3762 O2 -0.014 3.314
8g5z #7/L5 A 3759 N1 8g5z #7/S2 C 1708 C2' -0.018 3.538
8g60 #6/S2 G 1829 O3' 8g60 #6/S2 G 1059 N2 -0.019 2.719
8g5y #5/L5 C 3767 P 8g5y #5/S2 G 1849 C1' -0.020 4.000
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O2' -0.020 2.720
8g60 #6/S2 G 1059 N1 8g60 #6/S2 U 1830 OP1 -0.022 2.682
8g60 #6/S2 G 1826 N1 8g60 #6/S2 C 1708 N3 -0.022 2.902
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 OP1 -0.026 3.086
8g5y #5/L5 A2M 3760 C5 8g5y #5/S2 G 1826 O4' -0.026 3.096
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 C2 -0.027 3.247
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C5 -0.032 3.102
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 N1 -0.037 3.137
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 OP1 -0.041 3.101
8g5z #7/L5 A 3759 C4' 8g5z #7/S2 U 1827 C4' -0.042 3.802
8g5y #5/S2 G 1059 N2 8g5y #5/S2 U 1830 P -0.042 3.782
8g5z #7/L5 C 3767 P 8g5z #7/S2 G 1849 C1' -0.042 4.022
8g5y #5/S2 U 1830 P 8g5y #5/S2 G 1059 N1 -0.043 3.783
8g5y #5/S2 C 1708 O2 8g5y #5/S2 G 1826 N2 -0.044 2.704
8g61 #8/S2 C 1708 O2 8g61 #8/L5 A 3759 C2 -0.045 3.225
8g5y #5/S2 U 1827 O2 8g5y #5/L5 A 3766 C2 -0.047 3.227
8g60 #6/S2 G 1059 N2 8g60 #6/S2 U 1830 P -0.048 3.788
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 OP1 -0.049 3.109
8g5y #5/S2 C 1708 O2 8g5y #5/L5 A 3759 C2 -0.050 3.230
8g5y #5/S2 G 1829 O3' 8g5y #5/S2 G 1059 N2 -0.051 2.751
8g61 #8/L5 A 3759 O2' 8g61 #8/S2 G 1826 C2' -0.052 3.392
8g5y #5/S2 MA6 1850 C10 8g5y #5/S2 G 1059 N2 -0.053 3.573
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 C2 -0.054 3.274
8g60 #6/S2 G 1829 C3' 8g60 #6/S2 G 1059 N2 -0.055 3.575
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 OP1 -0.057 3.117
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 N1 -0.061 2.761
8g5y #5/S2 MA6 1850 C1' 8g5y #5/S2 U 1707 C1' -0.063 3.823
8g5y #5/L5 A2M 3760 C2 8g5y #5/S2 G 1826 O5' -0.065 3.285
8g5z #7/L5 C 3767 O2' 8g5z #7/S2 C 1828 C4' -0.067 3.407
8g60 #6/S2 C 1708 O2 8g60 #6/S2 G 1826 N2 -0.067 2.727
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 C2 -0.074 3.294
8g61 #8/S2 G 1849 P 8g61 #8/S2 U 1061 N3 -0.074 3.814
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 C2' -0.076 3.596
8g5y #5/L5 A 3759 C4' 8g5y #5/S2 U 1827 C4' -0.077 3.837
8g5z #7/L5 PSU 3762 O2 8g5z #7/S2 C 1710 C5' -0.082 3.382
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 N1 -0.083 3.333
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C8 -0.084 3.724
8g5z #7/S2 C 1708 O2 8g5z #7/L5 A 3759 C2 -0.085 3.265
8g61 #8/S2 G 1826 O2' 8g61 #8/L5 A 3759 O2' -0.091 2.611
8g5y #5/S2 G 1826 C6 8g5y #5/S2 G 1709 C6 -0.091 3.311
8g61 #8/S2 G 1849 C8 8g61 #8/L5 C 3767 OP1 -0.091 3.271
8g5y #5/L5 A 3766 C1' 8g5y #5/S2 C 1708 O2' -0.096 3.436
8g60 #6/L5 A 3766 C2' 8g60 #6/S2 G 1849 N3 -0.096 3.616
8g61 #8/S2 MA6 1850 O2' 8g61 #8/S2 U 1707 O4' -0.098 2.618
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 C6 -0.099 3.169
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 N1 -0.100 3.350
8g5y #5/S2 G 1849 N3 8g5y #5/L5 A 3766 O2' -0.102 2.802
8g5z #7/S2 C 1710 C4' 8g5z #7/L5 PSU 3762 O2 -0.103 3.403
8g60 #6/S2 U 1707 O2 8g60 #6/S2 G 1849 N2 -0.103 2.763
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 C6 -0.103 3.353
8g60 #6/S2 MA6 1850 C1' 8g60 #6/S2 U 1707 C1' -0.106 3.866
8g60 #6/L5 A2M 3760 C4 8g60 #6/S2 G 1826 O4' -0.107 3.177
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A 3759 O2' -0.109 3.449
8g5y #5/L5 A2M 3760 C4 8g5y #5/S2 G 1826 O4' -0.109 3.179
8g61 #8/S2 MA6 1850 C10 8g61 #8/S2 G 1059 N2 -0.110 3.630
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 C6 -0.110 3.360
8g60 #6/L5 C 3767 P 8g60 #6/S2 G 1849 C1' -0.113 4.093
8g5y #5/S2 G 1709 C5 8g5y #5/S2 G 1826 N1 -0.114 3.364
8g5z #7/S2 U 1827 O2 8g5z #7/L5 A 3766 C2 -0.114 3.294
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 N1 -0.117 3.397
8g5y #5/L5 C 3767 OP1 8g5y #5/S2 G 1849 C1' -0.118 3.418
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 C6 -0.120 3.190
8g5y #5/S2 MA6 1850 O4' 8g5y #5/S2 U 1707 C1' -0.122 3.462
8g5y #5/S2 G 1829 C4' 8g5y #5/S2 G 1059 N2 -0.123 3.643
8g61 #8/S2 U 1707 O4' 8g61 #8/S2 MA6 1850 C4' -0.128 3.468
8g60 #6/L5 A 3766 N1 8g60 #6/S2 U 1827 C2' -0.129 3.649
8g5z #7/L5 C 3767 OP1 8g5z #7/S2 G 1849 C1' -0.131 3.431
8g5y #5/L5 A 3759 C6 8g5y #5/S2 G 1709 C4' -0.131 3.621
8g5z #7/L5 A2M 3760 C6 8g5z #7/S2 G 1826 C5' -0.133 3.623
8g5y #5/S2 U 1707 O4' 8g5y #5/S2 MA6 1850 C4' -0.134 3.474
8g61 #8/L5 A2M 3760 N6 8g61 #8/S2 G 1826 C5' -0.134 3.654
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3766 C1' -0.135 3.475
8g5y #5/S2 U 1830 OP1 8g5y #5/S2 G 1059 N1 -0.138 2.798
8g5z #7/L5 A2M 3760 N6 8g5z #7/S2 G 1826 C5' -0.138 3.658
8g61 #8/S2 U 1827 O4 8g61 #8/S2 U 1707 O4 -0.141 2.981
8g5y #5/S2 G 1826 C8 8g5y #5/L5 A2M 3760 C6 -0.141 3.511
8g61 #8/S2 C 1708 C1' 8g61 #8/L5 A 3766 C1' -0.142 3.902
8g5y #5/S2 G 1829 C3' 8g5y #5/S2 G 1059 N2 -0.147 3.667
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 C6 -0.148 3.368
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 C2 -0.150 3.370
8g61 #8/L5 A 3766 C2' 8g61 #8/S2 G 1849 N2 -0.150 3.670
8g5z #7/L5 A2M 3760 CM' 8g5z #7/S2 G 1826 O4' -0.152 3.492
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 C2 -0.154 3.224
8g61 #8/S2 U 1827 C4' 8g61 #8/L5 A 3759 C4' -0.154 3.914
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A 3759 O2' -0.155 3.495
8g60 #6/S2 U 1827 C1' 8g60 #6/L5 A 3759 N3 -0.163 3.683
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 C6 -0.168 3.658
8g61 #8/L5 C 3767 O2' 8g61 #8/S2 C 1828 C4' -0.170 3.510
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 O6 -0.170 3.200
8g5y #5/L5 A 3766 C2' 8g5y #5/S2 G 1849 N3 -0.174 3.694
8g60 #6/S2 U 1827 O2 8g60 #6/L5 A 3766 C2 -0.175 3.355
8g5z #7/S2 G 1826 O2' 8g5z #7/L5 A 3759 O2' -0.175 2.695
8g5z #7/L5 A 3759 O2' 8g5z #7/S2 G 1826 C2' -0.176 3.516
8g5z #7/L5 A 3766 O2' 8g5z #7/S2 G 1849 C2 -0.178 3.248
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C5 -0.178 3.668
8g5y #5/L5 A 3766 N1 8g5y #5/S2 U 1827 C2' -0.180 3.700
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 C6 -0.180 3.670
8g60 #6/L5 PSU 3762 O2 8g60 #6/S2 C 1710 C5' -0.181 3.481
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 C5 -0.185 3.555
8g61 #8/S2 G 1826 N2 8g61 #8/S2 C 1708 C2 -0.186 3.436
8g60 #6/S2 G 1826 N2 8g60 #6/L5 A 3759 C2 -0.188 3.588
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 N3 -0.190 3.710
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 P -0.193 3.933
8g60 #6/L5 A2M 3760 N7 8g60 #6/S2 G 1826 O4' -0.194 3.294
8g61 #8/S2 G 1709 C5 8g61 #8/S2 G 1826 N1 -0.195 3.445
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 P -0.195 3.935
8g5y #5/S2 G 1849 C4 8g5y #5/L5 C 3767 C5' -0.199 3.689
8g5z #7/S2 G 1709 O4' 8g5z #7/L5 A 3759 C6 -0.201 3.271
8g60 #6/S2 G 1826 C6 8g60 #6/S2 G 1709 C6 -0.201 3.421
8g5z #7/L5 C 3767 C5' 8g5z #7/S2 G 1849 C5 -0.202 3.692
8g5y #5/L5 A 3759 C2' 8g5y #5/S2 G 1826 O2' -0.202 3.542
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 C2 -0.204 3.424
8g5y #5/S2 G 1709 O6 8g5y #5/S2 G 1826 O6 -0.207 3.047
8g5z #7/L5 A 3759 C6 8g5z #7/S2 G 1709 C4' -0.208 3.698
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 C2 -0.208 3.428
8g61 #8/S2 G 1826 O6 8g61 #8/S2 C 1708 N4 -0.210 2.870
8g60 #6/S2 MA6 1850 O4' 8g60 #6/S2 U 1707 C1' -0.210 3.550
8g60 #6/L5 A 3759 C1' 8g60 #6/S2 U 1827 O4' -0.213 3.553
8g60 #6/S2 C 1828 O4' 8g60 #6/L5 A 3766 C2 -0.213 3.433
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 C2 -0.218 3.438
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 P -0.218 3.958
8g61 #8/S2 G 1849 O5' 8g61 #8/S2 U 1061 C4 -0.221 3.291
8g5z #7/L5 A 3766 N1 8g5z #7/S2 U 1827 C2' -0.222 3.742
8g5z #7/S2 G 1849 N2 8g5z #7/L5 A 3766 C2' -0.222 3.742
8g60 #6/S2 U 1707 O4' 8g60 #6/S2 MA6 1850 C4' -0.222 3.562
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 P -0.222 3.962
8g61 #8/L5 A 3759 C2' 8g61 #8/S2 G 1826 O2' -0.224 3.564
8g5y #5/L5 C 3767 O2' 8g5y #5/S2 C 1828 C5' -0.226 3.566
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 C5 -0.227 3.717
8g5y #5/S2 C 1708 C1' 8g5y #5/L5 A 3766 C1' -0.231 3.991
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 O5' -0.232 3.112
8g60 #6/L5 A 3759 C4' 8g60 #6/S2 U 1827 C4' -0.238 3.998
8g60 #6/L5 A 3759 N3 8g60 #6/S2 G 1826 N2 -0.238 3.118
8g60 #6/L5 C 3767 C5' 8g60 #6/S2 G 1849 C5 -0.238 3.728
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 C4' -0.239 3.999
8g61 #8/S2 U 1827 O2 8g61 #8/L5 A 3766 C2 -0.241 3.421
8g61 #8/S2 G 1849 C5' 8g61 #8/S2 U 1061 C4 -0.242 3.732
8g5y #5/L5 A 3766 N9 8g5y #5/S2 C 1708 O2' -0.243 3.343
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 N1 -0.243 3.493
8g60 #6/S2 G 1849 N7 8g60 #6/L5 C 3767 OP1 -0.243 3.303
8g5y #5/L5 A 3759 C2 8g5y #5/S2 C 1708 C2' -0.244 3.884
8g5z #7/S2 G 1849 C4 8g5z #7/L5 C 3767 C5' -0.244 3.734
8g5z #7/L5 A 3759 C1' 8g5z #7/S2 U 1827 O4' -0.245 3.585
8g61 #8/L5 A 3766 C2 8g61 #8/S2 U 1827 C2' -0.247 3.887
8g5z #7/S2 C 1828 O4' 8g5z #7/L5 A 3766 C2 -0.248 3.468
8g61 #8/S2 G 1709 O6 8g61 #8/S2 G 1826 O6 -0.249 3.089
8g60 #6/S2 G 1709 C5 8g60 #6/S2 G 1826 N1 -0.250 3.500
8g61 #8/S2 MA6 1850 C1' 8g61 #8/S2 U 1707 C1' -0.251 4.011
8g61 #8/S2 G 1849 N2 8g61 #8/S2 U 1707 O2 -0.254 2.914
8g5y #5/L5 A 3766 C2 8g5y #5/S2 U 1827 C2' -0.254 3.894
8g60 #6/L5 A 3766 O2' 8g60 #6/S2 G 1849 C1' -0.255 3.595
8g5z #7/S2 G 1849 C6 8g5z #7/L5 C 3767 C5' -0.255 3.745
8g5y #5/S2 G 1826 N2 8g5y #5/S2 C 1708 C2 -0.257 3.507
8g5y #5/S2 C 1828 O4' 8g5y #5/L5 A 3766 C2 -0.258 3.478
8g60 #6/L5 A2M 3760 C8 8g60 #6/S2 G 1826 O4' -0.258 3.478
8g61 #8/L5 A 3759 C6 8g61 #8/S2 C 1708 O2' -0.261 3.331
8g61 #8/S2 G 1829 C3' 8g61 #8/S2 G 1059 N2 -0.261 3.781
8g61 #8/L5 A2M 3760 C8 8g61 #8/S2 G 1826 C5' -0.261 3.901
8g5y #5/L5 C 3767 C4' 8g5y #5/S2 C 1828 O2' -0.262 3.602
8g5y #5/L5 C 3767 C5' 8g5y #5/S2 G 1849 C5 -0.262 3.752
8g61 #8/S2 G 1849 C4 8g61 #8/L5 C 3767 C5' -0.263 3.753
8g60 #6/L5 C 3767 C4' 8g60 #6/S2 C 1828 O2' -0.267 3.607
8g5z #7/S2 G 1849 N1 8g5z #7/L5 C 3767 C5' -0.267 3.787
8g60 #6/S2 G 1849 C4 8g60 #6/L5 C 3767 C5' -0.269 3.759
8g5y #5/S2 U 1707 O2 8g5y #5/S2 G 1849 N2 -0.270 2.930
8g5y #5/L5 A 3759 C1' 8g5y #5/S2 U 1827 O4' -0.270 3.610
8g60 #6/L5 A 3759 C2' 8g60 #6/S2 G 1826 O2' -0.271 3.611
8g60 #6/L5 A 3766 C2 8g60 #6/S2 U 1827 C2' -0.271 3.911
8g61 #8/S2 G 1709 C5' 8g61 #8/L5 A 3759 C6 -0.273 3.763
8g5z #7/L5 A 3766 C1' 8g5z #7/S2 C 1708 O2' -0.273 3.613
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C5 -0.273 3.763
8g61 #8/L5 A 3759 C2 8g61 #8/S2 C 1708 C2' -0.274 3.914
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 N1 -0.275 3.555
8g5y #5/S2 MA6 1850 C2' 8g5y #5/S2 U 1707 C1' -0.277 4.037
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 N1 -0.278 3.378
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 C5' -0.278 3.578
8g61 #8/L5 A 3759 C3' 8g61 #8/S2 G 1826 O2' -0.278 3.618
8g60 #6/S2 G 1826 N2 8g60 #6/S2 C 1708 C2 -0.282 3.532
8g5y #5/S2 G 1826 O6 8g5y #5/S2 C 1708 N4 -0.283 2.943
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N2 -0.284 3.534
8g61 #8/L5 A 3766 N1 8g61 #8/S2 U 1827 C2' -0.284 3.804
8g5y #5/S2 G 1849 N3 8g5y #5/L5 C 3767 C5' -0.285 3.805
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 N7 -0.288 3.688
8g61 #8/S2 U 1830 P 8g61 #8/S2 G 1059 N1 -0.290 4.030
8g5y #5/S2 G 1826 C5 8g5y #5/S2 G 1709 N1 -0.291 3.541
8g5z #7/L5 A 3759 N3 8g5z #7/S2 G 1826 N2 -0.294 3.174
8g60 #6/S2 MA6 1850 C4' 8g60 #6/S2 U 1707 C4' -0.295 4.055
8g61 #8/S2 G 1849 N3 8g61 #8/L5 C 3767 C5' -0.297 3.817
8g60 #6/S2 G 1849 N2 8g60 #6/S2 U 1707 C2 -0.299 3.549
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O3' -0.299 3.399
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 N2 -0.304 3.004
8g60 #6/L5 A 3759 C6 8g60 #6/S2 C 1708 O2' -0.305 3.375
8g60 #6/L5 C 3767 OP1 8g60 #6/S2 G 1849 C1' -0.306 3.606
8g5y #5/L5 A2M 3760 N1 8g5y #5/S2 G 1826 O5' -0.307 3.407
8g61 #8/L5 A 3759 N3 8g61 #8/S2 G 1826 N2 -0.307 3.187
8g5y #5/S2 G 1709 N9 8g5y #5/S2 G 1826 N2 -0.308 3.588
8g5z #7/S2 U 1827 O4' 8g5z #7/L5 A 3759 O4' -0.310 3.230
8g5y #5/L5 A 3759 N3 8g5y #5/S2 U 1827 C1' -0.310 3.830
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 O6 -0.312 3.342
8g60 #6/S2 G 1826 O6 8g60 #6/S2 C 1708 N4 -0.312 2.972
8g60 #6/S2 G 1849 C5' 8g60 #6/S2 U 1061 O4 -0.316 3.616
8g60 #6/L5 C 3767 O2' 8g60 #6/S2 C 1828 C5' -0.316 3.656
8g60 #6/S2 G 1849 C2 8g60 #6/L5 A 3766 O2' -0.317 3.387
8g61 #8/L5 A 3759 C1' 8g61 #8/S2 U 1827 O4' -0.318 3.658
8g5z #7/L5 A 3759 O4' 8g5z #7/S2 U 1827 C4' -0.318 3.658
8g60 #6/S2 G 1709 O6 8g60 #6/S2 G 1826 O6 -0.321 3.161
8g60 #6/S2 MA6 1850 C2' 8g60 #6/S2 U 1707 C1' -0.321 4.081
8g60 #6/S2 U 1827 O4 8g60 #6/S2 U 1707 O4 -0.322 3.162
8g60 #6/S2 G 1849 C6 8g60 #6/L5 C 3767 C5' -0.322 3.812
8g60 #6/L5 A2M 3760 N9 8g60 #6/S2 G 1826 O4' -0.324 3.424
8g5y #5/S2 G 1849 N2 8g5y #5/S2 U 1707 C2 -0.324 3.574
8g5y #5/L5 A2M 3760 C6 8g5y #5/S2 G 1826 O4' -0.324 3.394
8g61 #8/L5 A2M 3760 C4 8g61 #8/S2 G 1826 C5' -0.325 3.815
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 C6 -0.327 3.547
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 O6 -0.328 3.358
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 P -0.331 4.191
8g61 #8/S2 G 1826 N1 8g61 #8/S2 C 1708 C2 -0.333 3.583
8g5y #5/S2 MA6 1850 O2' 8g5y #5/S2 U 1707 O4' -0.337 2.857
8g5z #7/L5 C 3767 C4' 8g5z #7/S2 C 1828 O2' -0.338 3.678
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 N1 -0.338 3.618
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 C2 -0.339 3.559
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 N1 -0.340 3.440
8g61 #8/S2 U 1827 C1' 8g61 #8/L5 A 3759 N3 -0.340 3.860
8g5y #5/S2 G 1826 C2 8g5y #5/S2 G 1709 N3 -0.341 3.591
8g61 #8/S2 G 1826 C5 8g61 #8/S2 G 1709 N1 -0.342 3.592
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A2M 3760 C5 -0.342 3.832
8g60 #6/S2 G 1826 C5' 8g60 #6/L5 A2M 3760 C2 -0.344 3.984
8g5y #5/S2 G 1826 C4' 8g5y #5/L5 A2M 3760 N3 -0.344 3.864
8g61 #8/L5 C 3767 C5' 8g61 #8/S2 G 1849 C5 -0.346 3.836
8g61 #8/S2 G 1849 C2 8g61 #8/L5 C 3767 C5' -0.348 3.838
8g5z #7/S2 C 1708 C1' 8g5z #7/L5 A 3766 C1' -0.348 4.108
8g61 #8/L5 A 3759 C4' 8g61 #8/S2 G 1826 O2' -0.353 3.693
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 N1 -0.353 3.603
8g61 #8/L5 A 3766 C1' 8g61 #8/S2 C 1708 C4' -0.354 4.114
8g61 #8/S2 C 1828 O4' 8g61 #8/L5 A 3766 C2 -0.354 3.574
8g61 #8/S2 MA6 1850 C2' 8g61 #8/S2 U 1707 O4' -0.355 3.695
8g61 #8/L5 A 3759 C5 8g61 #8/S2 G 1709 C4' -0.355 3.845
8g5y #5/S2 U 1827 C1' 8g5y #5/L5 A 3759 C1' -0.355 4.115
8g5y #5/S2 G 1849 C5' 8g5y #5/S2 U 1061 O4 -0.357 3.657
8g61 #8/S2 G 1709 C4 8g61 #8/S2 G 1826 N1 -0.359 3.609
8g60 #6/S2 G 1826 C5 8g60 #6/S2 G 1709 N1 -0.359 3.609
8g60 #6/S2 G 1849 N1 8g60 #6/L5 C 3767 C5' -0.359 3.879
8g5y #5/L5 A 3766 O2' 8g5y #5/S2 G 1849 C2 -0.359 3.429
8g5y #5/S2 G 1826 N2 8g5y #5/L5 A 3759 C2 -0.360 3.760
8g5z #7/L5 A 3759 C2 8g5z #7/S2 C 1708 C2' -0.360 4.000
8g5z #7/S2 G 1849 N3 8g5z #7/L5 C 3767 C5' -0.361 3.881
8g61 #8/S2 G 1849 N1 8g61 #8/L5 C 3767 C5' -0.364 3.884
8g5y #5/S2 G 1849 N1 8g5y #5/L5 C 3767 C5' -0.365 3.885
8g5y #5/S2 MA6 1850 C4' 8g5y #5/S2 U 1707 C4' -0.366 4.126
8g5y #5/S2 G 1849 C2 8g5y #5/L5 C 3767 C5' -0.366 3.856
8g61 #8/S2 G 1709 N2 8g61 #8/S2 G 1826 C5 -0.366 3.616
8g61 #8/S2 U 1827 O4' 8g61 #8/L5 A 3759 C4' -0.369 3.709
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A 3759 O2' -0.369 3.709
8g5z #7/S2 G 1849 C2 8g5z #7/L5 C 3767 C5' -0.373 3.863
8g61 #8/S2 G 1709 N3 8g61 #8/S2 G 1826 C2 -0.374 3.624
8g5y #5/S2 U 1707 N1 8g5y #5/S2 MA6 1850 O2' -0.375 3.475
8g61 #8/L5 C 3767 OP1 8g61 #8/S2 G 1849 O4' -0.375 3.255
8g60 #6/S2 MA6 1850 O2' 8g60 #6/S2 U 1707 O4' -0.377 2.897
8g5y #5/L5 A2M 3760 N7 8g5y #5/S2 G 1826 C1' -0.377 3.897
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 C1' -0.381 4.141
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 C2 -0.382 3.562
8g61 #8/S2 G 1826 N2 8g61 #8/L5 A 3759 C2 -0.382 3.782
8g5z #7/L5 A 3766 C2 8g5z #7/S2 U 1827 C2' -0.383 4.023
8g60 #6/L5 A 3759 C2 8g60 #6/S2 C 1708 C2' -0.383 4.023
8g5z #7/S2 G 1826 N2 8g5z #7/L5 A 3759 C2 -0.383 3.783
8g5z #7/L5 A 3766 N9 8g5z #7/S2 C 1708 O2' -0.385 3.485
8g60 #6/S2 G 1826 N9 8g60 #6/L5 A2M 3760 N7 -0.386 3.666
8g60 #6/S2 U 1830 OP1 8g60 #6/S2 G 1059 C6 -0.386 3.416
8g61 #8/S2 G 1826 C2 8g61 #8/S2 C 1708 N3 -0.386 3.636
8g61 #8/S2 G 1826 C6 8g61 #8/S2 C 1708 N3 -0.387 3.637
8g5z #7/L5 A 3766 C2' 8g5z #7/S2 G 1849 C2 -0.387 3.877
8g61 #8/L5 A 3766 N9 8g61 #8/S2 C 1708 O2' -0.387 3.487
8g60 #6/S2 G 1826 C2 8g60 #6/S2 G 1709 N3 -0.388 3.638
8g5y #5/S2 G 1826 O4' 8g5y #5/L5 A2M 3760 N3 -0.390 3.490
8g5y #5/S2 G 1849 C6 8g5y #5/L5 C 3767 C5' -0.393 3.883
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N1 -0.393 3.643
8g5y #5/S2 G 1826 N1 8g5y #5/S2 C 1708 C2 -0.400 3.650
361 contacts
> select #5-9/S2:1707-1710, 1826-1830, 1849-1850, 1059-1061
1505 atoms, 1660 bonds, 128 pseudobonds, 70 residues, 11 models selected
> color (#!5-8 & sel) light sea green
> select #5-9/L5:3765-3768, 3759-3760, 3762
750 atoms, 825 bonds, 35 residues, 5 models selected
> color (#!5-8 & sel) forest green
> select clear
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> show #!9 models
> select #5-9/L5:3765-3768, 3759-3760, 3762
750 atoms, 825 bonds, 35 residues, 5 models selected
> color (#!9 & sel) forest green
> select #5-9/S2:1707-1710, 1826-1830, 1849-1850, 1059-1061
1505 atoms, 1660 bonds, 128 pseudobonds, 70 residues, 11 models selected
> color (#!9 & sel) light sea green
> select clear
> show #!8 models
> show #!7 models
> show #!6 models
> show #!5 models
Drag select of 2251 atoms, 388 pseudobonds, 2485 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
470 contacts
atom1 atom2 overlap distance
8g60 #6/L5 A2M 3760 N6 8g60 #6/S2 G 1826 C8 0.368 3.032
8g61 #8/L5 A2M 3760 C5 8g61 #8/S2 G 1826 C5' 0.318 3.172
8g61 #8/L5 A 3759 N6 8g61 #8/S2 G 1709 C5' 0.300 3.220
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 N7 0.270 3.250
8g5y #5/S2 G 1826 O2' 8g5y #5/L5 A 3759 O2' 0.266 2.254
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 N7 0.249 3.271
8g61 #8/L5 A2M 3760 N7 8g61 #8/S2 G 1826 C5' 0.240 3.280
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 OP1 0.230 2.950
8g60 #6/L5 A 3759 O2' 8g60 #6/S2 G 1826 C2' 0.206 3.134
8g60 #6/S2 U 1830 P 8g60 #6/S2 G 1059 N1 0.195 3.545
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 N1 0.188 2.512
8g6j #9/S2 U 1707 C1' 8g6j #9/S2 MA6 1850 O2' 0.173 3.167
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 N7 0.170 3.350
8g5y #5/S2 G 1826 C5' 8g5y #5/L5 A2M 3760 C2 0.169 3.471
8g5y #5/S2 C 1828 C4' 8g5y #5/L5 C 3767 O2' 0.167 3.173
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 O2' 0.153 3.187
8g5y #5/L5 A2M 3760 N6 8g5y #5/S2 G 1826 C8 0.152 3.248
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 C8 0.148 3.492
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C8 0.147 3.493
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 C6 0.144 3.106
8g5y #5/L5 A 3759 N6 8g5y #5/S2 G 1709 C5' 0.138 3.382
8g60 #6/S2 G 1829 C4' 8g60 #6/S2 G 1059 N2 0.133 3.387
8g5y #5/S2 G 1709 C4' 8g5y #5/L5 A 3759 N6 0.129 3.391
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 N1 0.128 2.572
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 N1 0.127 2.933
8g6j #9/S2 G 1829 C4' 8g6j #9/S2 G 1059 N2 0.125 3.395
8g5y #5/S2 U 1707 C1' 8g5y #5/S2 MA6 1850 C4' 0.121 3.639
8g60 #6/L5 A2M 3760 N1 8g60 #6/S2 G 1826 P 0.120 3.620
8g61 #8/L5 A2M 3760 CM' 8g61 #8/S2 G 1826 O4' 0.120 3.220
8g61 #8/S2 C 1710 C4' 8g61 #8/L5 PSU 3762 O2 0.119 3.181
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 N6 0.118 3.402
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 O2' 0.116 3.224
8g5y #5/L5 A 3759 N1 8g5y #5/S2 C 1708 C2' 0.114 3.406
8g60 #6/S2 G 1826 O2' 8g60 #6/L5 A 3759 O2' 0.110 2.410
8g5z #7/S2 G 1826 C1' 8g5z #7/L5 A2M 3760 CM' 0.108 3.652
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 N1 0.102 2.598
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 O2' 0.100 3.240
8g60 #6/L5 A 3759 N6 8g60 #6/S2 G 1709 C5' 0.099 3.421
8g6j #9/L5 A2M 3760 N7 8g6j #9/S2 G 1826 C5' 0.099 3.421
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 N1 0.096 2.604
8g61 #8/S2 C 1708 N3 8g61 #8/S2 G 1826 N1 0.093 2.787
8g60 #6/S2 U 1707 C1' 8g60 #6/S2 MA6 1850 C4' 0.087 3.673
8g5z #7/L5 A2M 3760 N7 8g5z #7/S2 G 1826 C5' 0.086 3.434
8g60 #6/L5 A 3766 O3' 8g60 #6/S2 G 1849 C1' 0.085 3.255
8g61 #8/L5 A2M 3760 C6 8g61 #8/S2 G 1826 C5' 0.084 3.406
8g5z #7/L5 A2M 3760 C8 8g5z #7/S2 G 1826 C4' 0.082 3.558
8g5y #5/L5 A 3759 O2' 8g5y #5/S2 G 1826 C2' 0.079 3.261
8g6j #9/S2 U 1707 C1' 8g6j #9/S2 MA6 1850 C4' 0.075 3.685
8g61 #8/S2 G 1829 C4' 8g61 #8/S2 G 1059 N2 0.069 3.451
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 C2 0.068 3.152
8g5y #5/S2 G 1849 C8 8g5y #5/L5 C 3767 OP1 0.062 3.118
8g6j #9/S2 G 1709 C4' 8g6j #9/L5 A 3759 N6 0.060 3.460
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 N6 0.058 3.462
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 N1 0.057 2.643
8g61 #8/L5 PSU 3762 O2 8g61 #8/S2 C 1710 C5' 0.051 3.249
8g6j #9/L5 A2M 3760 C5 8g6j #9/S2 G 1826 C5' 0.051 3.439
8g5y #5/L5 A 3766 O3' 8g5y #5/S2 G 1849 C1' 0.051 3.289
8g61 #8/S2 C 1708 O2 8g61 #8/S2 G 1826 N2 0.046 2.614
8g60 #6/L5 A2M 3760 C6 8g60 #6/S2 G 1826 C8 0.043 3.327
8g5z #7/L5 A2M 3760 C5 8g5z #7/S2 G 1826 C5' 0.039 3.451
8g61 #8/L5 A 3759 N1 8g61 #8/S2 C 1708 C2' 0.038 3.482
8g6j #9/S2 G 1849 C8 8g6j #9/L5 C 3767 OP1 0.038 3.142
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 C2 0.038 3.182
8g5z #7/S2 G 1849 C8 8g5z #7/L5 C 3767 OP1 0.038 3.142
8g6j #9/S2 C 1708 O2 8g6j #9/L5 A 3759 C2 0.038 3.142
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 N1 0.034 2.666
8g60 #6/L5 A 3759 N1 8g60 #6/S2 C 1708 C2' 0.034 3.486
8g60 #6/S2 G 1849 N3 8g60 #6/L5 A 3766 O2' 0.032 2.668
8g5z #7/L5 A 3759 N6 8g5z #7/S2 G 1709 C5' 0.032 3.488
8g6j #9/L5 A 3766 O3' 8g6j #9/S2 G 1849 C1' 0.032 3.308
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A2M 3760 CM' 0.031 3.729
8g5z #7/L5 A 3766 O3' 8g5z #7/S2 G 1849 C1' 0.031 3.309
8g60 #6/S2 C 1708 O2 8g60 #6/L5 A 3759 C2 0.029 3.151
8g6j #9/S2 G 1849 N3 8g6j #9/L5 A 3766 O2' 0.025 2.675
8g5y #5/L5 PSU 3762 O2 8g5y #5/S2 C 1710 C5' 0.025 3.275
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 O2' 0.025 2.675
8g5y #5/S2 C 1708 N3 8g5y #5/S2 G 1826 N1 0.024 2.856
8g5y #5/S2 C 1710 C4' 8g5y #5/L5 PSU 3762 O2 0.023 3.277
8g61 #8/L5 C 3767 P 8g61 #8/S2 G 1849 C1' 0.023 3.957
8g60 #6/S2 C 1828 C4' 8g60 #6/L5 C 3767 O2' 0.019 3.321
8g6j #9/S2 G 1709 N1 8g6j #9/S2 G 1826 C6 0.018 3.232
8g5z #7/S2 G 1709 C4' 8g5z #7/L5 A 3759 N6 0.017 3.503
8g61 #8/S2 MA6 1850 C4' 8g61 #8/S2 U 1707 C4' 0.016 3.744
8g6j #9/L5 A 3759 N6 8g6j #9/S2 G 1709 C5' 0.016 3.504
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 N7 0.014 3.506
8g5y #5/L5 A2M 3760 N3 8g5y #5/S2 G 1826 C5' 0.010 3.510
8g61 #8/S2 G 1849 C1' 8g61 #8/L5 C 3767 OP1 0.008 3.292
8g61 #8/S2 U 1827 O2' 8g61 #8/L5 A 3766 N1 0.007 2.693
8g6j #9/S2 G 1849 N3 8g6j #9/L5 A 3766 C2' 0.002 3.518
8g5z #7/S2 G 1849 N3 8g5z #7/L5 A 3766 C2' 0.002 3.518
8g6j #9/S2 C 1708 O2' 8g6j #9/L5 A 3759 N1 0.001 2.699
8g6j #9/S2 C 1710 C4' 8g6j #9/L5 PSU 3762 O2 -0.001 3.301
8g60 #6/L5 A2M 3760 C5 8g60 #6/S2 G 1826 O4' -0.004 3.074
8g6j #9/L5 PSU 3762 O2 8g6j #9/S2 C 1710 C5' -0.005 3.305
8g61 #8/L5 A 3766 O3' 8g61 #8/S2 G 1849 C1' -0.005 3.345
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C6 -0.005 3.075
8g6j #9/L5 A 3759 N1 8g6j #9/S2 C 1708 C2' -0.011 3.531
8g60 #6/L5 A2M 3760 C2 8g60 #6/S2 G 1826 P -0.011 3.871
8g60 #6/S2 MA6 1850 C10 8g60 #6/S2 G 1059 N2 -0.013 3.533
8g60 #6/S2 C 1710 C4' 8g60 #6/L5 PSU 3762 O2 -0.014 3.314
8g5z #7/L5 A 3759 N1 8g5z #7/S2 C 1708 C2' -0.018 3.538
8g60 #6/S2 G 1829 O3' 8g60 #6/S2 G 1059 N2 -0.019 2.719
8g5y #5/L5 C 3767 P 8g5y #5/S2 G 1849 C1' -0.020 4.000
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O2' -0.020 2.720
8g6j #9/S2 G 1826 O2' 8g6j #9/L5 A 3759 O2' -0.021 2.541
8g60 #6/S2 G 1059 N1 8g60 #6/S2 U 1830 OP1 -0.022 2.682
8g60 #6/S2 G 1826 N1 8g60 #6/S2 C 1708 N3 -0.022 2.902
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 OP1 -0.026 3.086
8g5y #5/L5 A2M 3760 C5 8g5y #5/S2 G 1826 O4' -0.026 3.096
8g60 #6/S2 U 1827 O2' 8g60 #6/L5 A 3766 C2 -0.027 3.247
8g61 #8/S2 G 1709 O4' 8g61 #8/L5 A 3759 C5 -0.032 3.102
8g60 #6/S2 G 1826 O5' 8g60 #6/L5 A2M 3760 N1 -0.037 3.137
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 OP1 -0.041 3.101
8g6j #9/L5 A 3759 O2' 8g6j #9/S2 G 1826 C2' -0.041 3.381
8g5z #7/L5 A 3759 C4' 8g5z #7/S2 U 1827 C4' -0.042 3.802
8g5y #5/S2 G 1059 N2 8g5y #5/S2 U 1830 P -0.042 3.782
8g6j #9/L5 C 3767 P 8g6j #9/S2 G 1849 C1' -0.042 4.022
8g5z #7/L5 C 3767 P 8g5z #7/S2 G 1849 C1' -0.042 4.022
8g5y #5/S2 U 1830 P 8g5y #5/S2 G 1059 N1 -0.043 3.783
8g6j #9/S2 G 1826 C1' 8g6j #9/L5 A2M 3760 CM' -0.043 3.803
8g5y #5/S2 C 1708 O2 8g5y #5/S2 G 1826 N2 -0.044 2.704
8g61 #8/S2 C 1708 O2 8g61 #8/L5 A 3759 C2 -0.045 3.225
8g5y #5/S2 U 1827 O2 8g5y #5/L5 A 3766 C2 -0.047 3.227
8g60 #6/S2 G 1059 N2 8g60 #6/S2 U 1830 P -0.048 3.788
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 OP1 -0.049 3.109
8g6j #9/S2 G 1829 C3' 8g6j #9/S2 G 1059 N2 -0.050 3.570
8g5y #5/S2 C 1708 O2 8g5y #5/L5 A 3759 C2 -0.050 3.230
8g5y #5/S2 G 1829 O3' 8g5y #5/S2 G 1059 N2 -0.051 2.751
8g61 #8/L5 A 3759 O2' 8g61 #8/S2 G 1826 C2' -0.052 3.392
8g5y #5/S2 MA6 1850 C10 8g5y #5/S2 G 1059 N2 -0.053 3.573
8g5y #5/S2 U 1827 O2' 8g5y #5/L5 A 3766 C2 -0.054 3.274
8g60 #6/S2 G 1829 C3' 8g60 #6/S2 G 1059 N2 -0.055 3.575
8g6j #9/S2 G 1849 N9 8g6j #9/L5 C 3767 OP1 -0.057 3.117
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 OP1 -0.057 3.117
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 N1 -0.061 2.761
8g6j #9/S2 U 1827 O2' 8g6j #9/L5 A 3766 N1 -0.062 2.762
8g5y #5/S2 MA6 1850 C1' 8g5y #5/S2 U 1707 C1' -0.063 3.823
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 N3 -0.064 3.584
8g6j #9/L5 A 3759 C4' 8g6j #9/S2 U 1827 C4' -0.064 3.824
8g5y #5/L5 A2M 3760 C2 8g5y #5/S2 G 1826 O5' -0.065 3.285
8g6j #9/L5 C 3767 O2' 8g6j #9/S2 C 1828 C4' -0.067 3.407
8g5z #7/L5 C 3767 O2' 8g5z #7/S2 C 1828 C4' -0.067 3.407
8g60 #6/S2 C 1708 O2 8g60 #6/S2 G 1826 N2 -0.067 2.727
8g6j #9/S2 U 1707 O2 8g6j #9/S2 G 1849 N2 -0.069 2.729
8g6j #9/S2 G 1709 N3 8g6j #9/S2 G 1826 C2 -0.072 3.322
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3759 C2 -0.074 3.294
8g61 #8/S2 G 1849 P 8g61 #8/S2 U 1061 N3 -0.074 3.814
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 C2' -0.076 3.596
8g5y #5/L5 A 3759 C4' 8g5y #5/S2 U 1827 C4' -0.077 3.837
8g6j #9/S2 U 1830 P 8g6j #9/S2 G 1059 N1 -0.081 3.821
8g5z #7/L5 PSU 3762 O2 8g5z #7/S2 C 1710 C5' -0.082 3.382
8g6j #9/S2 G 1826 N1 8g6j #9/S2 C 1708 N3 -0.083 2.963
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 N1 -0.083 3.333
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C8 -0.084 3.724
8g5z #7/S2 C 1708 O2 8g5z #7/L5 A 3759 C2 -0.085 3.265
8g6j #9/S2 U 1827 O4' 8g6j #9/L5 A 3759 O4' -0.086 3.006
8g61 #8/S2 G 1826 O2' 8g61 #8/L5 A 3759 O2' -0.091 2.611
8g5y #5/S2 G 1826 C6 8g5y #5/S2 G 1709 C6 -0.091 3.311
8g61 #8/S2 G 1849 C8 8g61 #8/L5 C 3767 OP1 -0.091 3.271
8g5y #5/L5 A 3766 C1' 8g5y #5/S2 C 1708 O2' -0.096 3.436
8g60 #6/L5 A 3766 C2' 8g60 #6/S2 G 1849 N3 -0.096 3.616
8g6j #9/L5 A 3759 N3 8g6j #9/S2 G 1826 N2 -0.096 2.976
8g61 #8/S2 MA6 1850 O2' 8g61 #8/S2 U 1707 O4' -0.098 2.618
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 C6 -0.099 3.169
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 N1 -0.100 3.350
8g5y #5/S2 G 1849 N3 8g5y #5/L5 A 3766 O2' -0.102 2.802
8g5z #7/S2 C 1710 C4' 8g5z #7/L5 PSU 3762 O2 -0.103 3.403
8g60 #6/S2 U 1707 O2 8g60 #6/S2 G 1849 N2 -0.103 2.763
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 C6 -0.103 3.353
8g60 #6/S2 MA6 1850 C1' 8g60 #6/S2 U 1707 C1' -0.106 3.866
8g6j #9/S2 G 1709 N2 8g6j #9/S2 G 1826 C4 -0.107 3.357
8g60 #6/L5 A2M 3760 C4 8g60 #6/S2 G 1826 O4' -0.107 3.177
8g61 #8/S2 G 1826 C1' 8g61 #8/L5 A 3759 O2' -0.109 3.449
8g5y #5/L5 A2M 3760 C4 8g5y #5/S2 G 1826 O4' -0.109 3.179
8g61 #8/S2 MA6 1850 C10 8g61 #8/S2 G 1059 N2 -0.110 3.630
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 C6 -0.110 3.360
8g6j #9/S2 G 1829 O3' 8g6j #9/S2 G 1059 N2 -0.110 2.810
8g60 #6/L5 C 3767 P 8g60 #6/S2 G 1849 C1' -0.113 4.093
8g6j #9/L5 A 3766 C2 8g6j #9/S2 U 1827 O2 -0.114 3.294
8g5y #5/S2 G 1709 C5 8g5y #5/S2 G 1826 N1 -0.114 3.364
8g5z #7/S2 U 1827 O2 8g5z #7/L5 A 3766 C2 -0.114 3.294
8g61 #8/S2 G 1709 N1 8g61 #8/S2 G 1826 N1 -0.117 3.397
8g5y #5/L5 C 3767 OP1 8g5y #5/S2 G 1849 C1' -0.118 3.418
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 C6 -0.120 3.190
8g5y #5/S2 MA6 1850 O4' 8g5y #5/S2 U 1707 C1' -0.122 3.462
8g5y #5/S2 G 1829 C4' 8g5y #5/S2 G 1059 N2 -0.123 3.643
8g61 #8/S2 U 1707 O4' 8g61 #8/S2 MA6 1850 C4' -0.128 3.468
8g60 #6/L5 A 3766 N1 8g60 #6/S2 U 1827 C2' -0.129 3.649
8g6j #9/S2 G 1709 O4' 8g6j #9/L5 A 3759 C6 -0.130 3.200
8g5z #7/L5 C 3767 OP1 8g5z #7/S2 G 1849 C1' -0.131 3.431
8g6j #9/L5 C 3767 OP1 8g6j #9/S2 G 1849 C1' -0.131 3.431
8g5y #5/L5 A 3759 C6 8g5y #5/S2 G 1709 C4' -0.131 3.621
8g5z #7/L5 A2M 3760 C6 8g5z #7/S2 G 1826 C5' -0.133 3.623
8g5y #5/S2 U 1707 O4' 8g5y #5/S2 MA6 1850 C4' -0.134 3.474
8g61 #8/L5 A2M 3760 N6 8g61 #8/S2 G 1826 C5' -0.134 3.654
8g61 #8/S2 C 1708 O2' 8g61 #8/L5 A 3766 C1' -0.135 3.475
8g5y #5/S2 U 1830 OP1 8g5y #5/S2 G 1059 N1 -0.138 2.798
8g5z #7/L5 A2M 3760 N6 8g5z #7/S2 G 1826 C5' -0.138 3.658
8g61 #8/S2 U 1827 O4 8g61 #8/S2 U 1707 O4 -0.141 2.981
8g6j #9/L5 A 3759 O4' 8g6j #9/S2 U 1827 C4' -0.141 3.481
8g5y #5/S2 G 1826 C8 8g5y #5/L5 A2M 3760 C6 -0.141 3.511
8g61 #8/S2 C 1708 C1' 8g61 #8/L5 A 3766 C1' -0.142 3.902
8g6j #9/S2 MA6 1850 C10 8g6j #9/S2 G 1059 N2 -0.145 3.665
8g6j #9/L5 A2M 3760 CM' 8g6j #9/S2 G 1826 O4' -0.147 3.487
8g5y #5/S2 G 1829 C3' 8g5y #5/S2 G 1059 N2 -0.147 3.667
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 C6 -0.148 3.368
8g5y #5/S2 C 1708 O2' 8g5y #5/L5 A 3759 C2 -0.150 3.370
8g61 #8/L5 A 3766 C2' 8g61 #8/S2 G 1849 N2 -0.150 3.670
8g5z #7/L5 A2M 3760 CM' 8g5z #7/S2 G 1826 O4' -0.152 3.492
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 C2 -0.154 3.224
8g61 #8/S2 U 1827 C4' 8g61 #8/L5 A 3759 C4' -0.154 3.914
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A 3759 O2' -0.155 3.495
8g60 #6/S2 U 1827 C1' 8g60 #6/L5 A 3759 N3 -0.163 3.683
8g6j #9/S2 MA6 1850 C1' 8g6j #9/S2 U 1707 C1' -0.168 3.928
8g61 #8/S2 G 1709 C4' 8g61 #8/L5 A 3759 C6 -0.168 3.658
8g6j #9/S2 U 1827 O4' 8g6j #9/L5 A 3759 C1' -0.168 3.508
8g61 #8/L5 C 3767 O2' 8g61 #8/S2 C 1828 C4' -0.170 3.510
8g61 #8/S2 G 1709 C6 8g61 #8/S2 G 1826 O6 -0.170 3.200
8g5y #5/L5 A 3766 C2' 8g5y #5/S2 G 1849 N3 -0.174 3.694
8g60 #6/S2 U 1827 O2 8g60 #6/L5 A 3766 C2 -0.175 3.355
8g5z #7/S2 G 1826 O2' 8g5z #7/L5 A 3759 O2' -0.175 2.695
8g5z #7/L5 A 3759 O2' 8g5z #7/S2 G 1826 C2' -0.176 3.516
8g6j #9/L5 A 3766 O2' 8g6j #9/S2 G 1849 C2 -0.178 3.248
8g5z #7/L5 A 3766 O2' 8g5z #7/S2 G 1849 C2 -0.178 3.248
8g61 #8/S2 G 1826 C4' 8g61 #8/L5 A2M 3760 C5 -0.178 3.668
8g5y #5/L5 A 3766 N1 8g5y #5/S2 U 1827 C2' -0.180 3.700
8g60 #6/S2 G 1709 C4' 8g60 #6/L5 A 3759 C6 -0.180 3.670
8g60 #6/L5 PSU 3762 O2 8g60 #6/S2 C 1710 C5' -0.181 3.481
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 C5 -0.185 3.555
8g61 #8/S2 G 1826 N2 8g61 #8/S2 C 1708 C2 -0.186 3.436
8g6j #9/S2 G 1826 N2 8g6j #9/L5 A 3759 C2 -0.188 3.588
8g60 #6/S2 G 1826 N2 8g60 #6/L5 A 3759 C2 -0.188 3.588
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 N3 -0.190 3.710
8g6j #9/S2 G 1849 N9 8g6j #9/L5 C 3767 P -0.193 3.933
8g5z #7/S2 G 1849 N9 8g5z #7/L5 C 3767 P -0.193 3.933
8g60 #6/L5 A2M 3760 N7 8g60 #6/S2 G 1826 O4' -0.194 3.294
8g61 #8/S2 G 1709 C5 8g61 #8/S2 G 1826 N1 -0.195 3.445
8g6j #9/L5 A 3759 C6 8g6j #9/S2 G 1709 C4' -0.195 3.685
8g60 #6/S2 G 1849 N9 8g60 #6/L5 C 3767 P -0.195 3.935
8g5y #5/S2 G 1849 C4 8g5y #5/L5 C 3767 C5' -0.199 3.689
8g5z #7/S2 G 1709 O4' 8g5z #7/L5 A 3759 C6 -0.201 3.271
8g60 #6/S2 G 1826 C6 8g60 #6/S2 G 1709 C6 -0.201 3.421
8g5z #7/L5 C 3767 C5' 8g5z #7/S2 G 1849 C5 -0.202 3.692
8g6j #9/L5 C 3767 C5' 8g6j #9/S2 G 1849 C5 -0.202 3.692
8g5y #5/L5 A 3759 C2' 8g5y #5/S2 G 1826 O2' -0.202 3.542
8g5z #7/S2 C 1708 O2' 8g5z #7/L5 A 3759 C2 -0.204 3.424
8g6j #9/S2 G 1709 N1 8g6j #9/S2 G 1826 N1 -0.204 3.484
8g5y #5/S2 G 1709 O6 8g5y #5/S2 G 1826 O6 -0.207 3.047
8g5z #7/L5 A 3759 C6 8g5z #7/S2 G 1709 C4' -0.208 3.698
8g60 #6/S2 C 1708 O2' 8g60 #6/L5 A 3759 C2 -0.208 3.428
8g6j #9/S2 G 1826 C6 8g6j #9/S2 G 1709 C6 -0.209 3.429
8g61 #8/S2 G 1826 O6 8g61 #8/S2 C 1708 N4 -0.210 2.870
8g60 #6/S2 MA6 1850 O4' 8g60 #6/S2 U 1707 C1' -0.210 3.550
8g60 #6/L5 A 3759 C1' 8g60 #6/S2 U 1827 O4' -0.213 3.553
8g60 #6/S2 C 1828 O4' 8g60 #6/L5 A 3766 C2 -0.213 3.433
8g5z #7/S2 U 1827 O2' 8g5z #7/L5 A 3766 C2 -0.218 3.438
8g6j #9/S2 U 1827 O2' 8g6j #9/L5 A 3766 C2 -0.218 3.438
8g5y #5/S2 G 1849 N9 8g5y #5/L5 C 3767 P -0.218 3.958
8g61 #8/S2 G 1849 O5' 8g61 #8/S2 U 1061 C4 -0.221 3.291
8g5z #7/L5 A 3766 N1 8g5z #7/S2 U 1827 C2' -0.222 3.742
8g5z #7/S2 G 1849 N2 8g5z #7/L5 A 3766 C2' -0.222 3.742
8g60 #6/S2 U 1707 O4' 8g60 #6/S2 MA6 1850 C4' -0.222 3.562
8g61 #8/S2 G 1849 N9 8g61 #8/L5 C 3767 P -0.222 3.962
8g6j #9/L5 A 3766 N1 8g6j #9/S2 U 1827 C2' -0.222 3.742
8g6j #9/L5 A2M 3760 C6 8g6j #9/S2 G 1826 C5' -0.222 3.712
8g6j #9/L5 A 3766 C2' 8g6j #9/S2 G 1849 N2 -0.223 3.743
8g61 #8/L5 A 3759 C2' 8g61 #8/S2 G 1826 O2' -0.224 3.564
8g5y #5/L5 C 3767 O2' 8g5y #5/S2 C 1828 C5' -0.226 3.566
8g5z #7/S2 G 1826 C4' 8g5z #7/L5 A2M 3760 C5 -0.227 3.717
8g5y #5/S2 C 1708 C1' 8g5y #5/L5 A 3766 C1' -0.231 3.991
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 O5' -0.232 3.112
8g6j #9/S2 G 1709 C5 8g6j #9/S2 G 1826 N1 -0.237 3.487
8g60 #6/L5 A 3759 C4' 8g60 #6/S2 U 1827 C4' -0.238 3.998
8g60 #6/L5 A 3759 N3 8g60 #6/S2 G 1826 N2 -0.238 3.118
8g60 #6/L5 C 3767 C5' 8g60 #6/S2 G 1849 C5 -0.238 3.728
8g61 #8/S2 U 1707 C1' 8g61 #8/S2 MA6 1850 C4' -0.239 3.999
8g61 #8/S2 U 1827 O2 8g61 #8/L5 A 3766 C2 -0.241 3.421
8g61 #8/S2 G 1849 C5' 8g61 #8/S2 U 1061 C4 -0.242 3.732
8g5y #5/L5 A 3766 N9 8g5y #5/S2 C 1708 O2' -0.243 3.343
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 N1 -0.243 3.493
8g60 #6/S2 G 1849 N7 8g60 #6/L5 C 3767 OP1 -0.243 3.303
8g5y #5/L5 A 3759 C2 8g5y #5/S2 C 1708 C2' -0.244 3.884
8g5z #7/S2 G 1849 C4 8g5z #7/L5 C 3767 C5' -0.244 3.734
8g6j #9/S2 G 1849 C4 8g6j #9/L5 C 3767 C5' -0.244 3.734
8g5z #7/L5 A 3759 C1' 8g5z #7/S2 U 1827 O4' -0.245 3.585
8g61 #8/L5 A 3766 C2 8g61 #8/S2 U 1827 C2' -0.247 3.887
8g6j #9/S2 C 1828 O4' 8g6j #9/L5 A 3766 C2 -0.247 3.467
8g5z #7/S2 C 1828 O4' 8g5z #7/L5 A 3766 C2 -0.248 3.468
8g61 #8/S2 G 1709 O6 8g61 #8/S2 G 1826 O6 -0.249 3.089
8g60 #6/S2 G 1709 C5 8g60 #6/S2 G 1826 N1 -0.250 3.500
8g61 #8/S2 MA6 1850 C1' 8g61 #8/S2 U 1707 C1' -0.251 4.011
8g6j #9/S2 G 1059 N2 8g6j #9/S2 U 1830 P -0.251 3.991
8g6j #9/S2 U 1707 O4' 8g6j #9/S2 MA6 1850 C4' -0.251 3.591
8g6j #9/S2 G 1826 C5 8g6j #9/S2 G 1709 N1 -0.251 3.501
8g6j #9/S2 G 1709 C6 8g6j #9/S2 G 1826 N1 -0.252 3.502
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 N1 -0.254 3.504
8g61 #8/S2 G 1849 N2 8g61 #8/S2 U 1707 O2 -0.254 2.914
8g5y #5/L5 A 3766 C2 8g5y #5/S2 U 1827 C2' -0.254 3.894
8g6j #9/S2 G 1849 C6 8g6j #9/L5 C 3767 C5' -0.255 3.745
8g60 #6/L5 A 3766 O2' 8g60 #6/S2 G 1849 C1' -0.255 3.595
8g5z #7/S2 G 1849 C6 8g5z #7/L5 C 3767 C5' -0.255 3.745
8g6j #9/S2 MA6 1850 O4' 8g6j #9/S2 U 1707 C1' -0.256 3.596
8g5y #5/S2 G 1826 N2 8g5y #5/S2 C 1708 C2 -0.257 3.507
8g5y #5/S2 C 1828 O4' 8g5y #5/L5 A 3766 C2 -0.258 3.478
8g60 #6/L5 A2M 3760 C8 8g60 #6/S2 G 1826 O4' -0.258 3.478
8g61 #8/L5 A 3759 C6 8g61 #8/S2 C 1708 O2' -0.261 3.331
8g61 #8/S2 G 1829 C3' 8g61 #8/S2 G 1059 N2 -0.261 3.781
8g61 #8/L5 A2M 3760 C8 8g61 #8/S2 G 1826 C5' -0.261 3.901
8g5y #5/L5 C 3767 C4' 8g5y #5/S2 C 1828 O2' -0.262 3.602
8g6j #9/S2 G 1709 C1' 8g6j #9/S2 G 1826 N2 -0.262 3.782
8g5y #5/L5 C 3767 C5' 8g5y #5/S2 G 1849 C5 -0.262 3.752
8g61 #8/S2 G 1849 C4 8g61 #8/L5 C 3767 C5' -0.263 3.753
8g6j #9/S2 G 1849 N1 8g6j #9/L5 C 3767 C5' -0.267 3.787
8g60 #6/L5 C 3767 C4' 8g60 #6/S2 C 1828 O2' -0.267 3.607
8g5z #7/S2 G 1849 N1 8g5z #7/L5 C 3767 C5' -0.267 3.787
8g60 #6/S2 G 1849 C4 8g60 #6/L5 C 3767 C5' -0.269 3.759
8g5y #5/S2 U 1707 O2 8g5y #5/S2 G 1849 N2 -0.270 2.930
8g5y #5/L5 A 3759 C1' 8g5y #5/S2 U 1827 O4' -0.270 3.610
8g60 #6/L5 A 3759 C2' 8g60 #6/S2 G 1826 O2' -0.271 3.611
8g60 #6/L5 A 3766 C2 8g60 #6/S2 U 1827 C2' -0.271 3.911
8g6j #9/L5 A 3766 C1' 8g6j #9/S2 C 1708 O2' -0.272 3.612
8g61 #8/S2 G 1709 C5' 8g61 #8/L5 A 3759 C6 -0.273 3.763
8g5z #7/L5 A 3766 C1' 8g5z #7/S2 C 1708 O2' -0.273 3.613
8g60 #6/S2 G 1826 C1' 8g60 #6/L5 A2M 3760 C5 -0.273 3.763
8g61 #8/L5 A 3759 C2 8g61 #8/S2 C 1708 C2' -0.274 3.914
8g6j #9/S2 G 1826 O6 8g6j #9/S2 C 1708 N4 -0.274 2.934
8g5y #5/S2 G 1709 N1 8g5y #5/S2 G 1826 N1 -0.275 3.555
8g5y #5/S2 MA6 1850 C2' 8g5y #5/S2 U 1707 C1' -0.277 4.037
8g5y #5/S2 G 1709 O4' 8g5y #5/L5 A 3759 N1 -0.278 3.378
8g61 #8/S2 U 1061 O4 8g61 #8/S2 G 1849 C5' -0.278 3.578
8g61 #8/L5 A 3759 C3' 8g61 #8/S2 G 1826 O2' -0.278 3.618
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 N2 -0.279 3.529
8g6j #9/S2 G 1826 N2 8g6j #9/S2 C 1708 O2 -0.280 2.940
8g60 #6/S2 G 1826 N2 8g60 #6/S2 C 1708 C2 -0.282 3.532
8g5y #5/S2 G 1826 O6 8g5y #5/S2 C 1708 N4 -0.283 2.943
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N2 -0.284 3.534
8g61 #8/L5 A 3766 N1 8g61 #8/S2 U 1827 C2' -0.284 3.804
8g5y #5/S2 G 1849 N3 8g5y #5/L5 C 3767 C5' -0.285 3.805
8g60 #6/S2 G 1826 C8 8g60 #6/L5 A2M 3760 N7 -0.288 3.688
8g6j #9/S2 G 1826 C4' 8g6j #9/L5 A2M 3760 C5 -0.290 3.780
8g61 #8/S2 U 1830 P 8g61 #8/S2 G 1059 N1 -0.290 4.030
8g6j #9/S2 G 1849 N2 8g6j #9/S2 U 1707 C2 -0.290 3.540
8g5y #5/S2 G 1826 C5 8g5y #5/S2 G 1709 N1 -0.291 3.541
8g6j #9/S2 G 1709 C2 8g6j #9/S2 G 1826 N1 -0.292 3.542
8g5z #7/L5 A 3759 N3 8g5z #7/S2 G 1826 N2 -0.294 3.174
8g60 #6/S2 MA6 1850 C4' 8g60 #6/S2 U 1707 C4' -0.295 4.055
8g61 #8/S2 G 1849 N3 8g61 #8/L5 C 3767 C5' -0.297 3.817
8g6j #9/S2 C 1708 O2' 8g6j #9/L5 A 3759 C2 -0.297 3.517
8g60 #6/S2 G 1849 N2 8g60 #6/S2 U 1707 C2 -0.299 3.549
8g61 #8/S2 G 1849 N3 8g61 #8/L5 A 3766 O3' -0.299 3.399
8g6j #9/S2 G 1709 N3 8g6j #9/S2 G 1826 N3 -0.301 3.581
8g61 #8/L5 A 3766 O2' 8g61 #8/S2 G 1849 N2 -0.304 3.004
8g60 #6/L5 A 3759 C6 8g60 #6/S2 C 1708 O2' -0.305 3.375
8g60 #6/L5 C 3767 OP1 8g60 #6/S2 G 1849 C1' -0.306 3.606
8g6j #9/S2 MA6 1850 C2' 8g6j #9/S2 U 1707 C1' -0.307 4.067
8g5y #5/L5 A2M 3760 N1 8g5y #5/S2 G 1826 O5' -0.307 3.407
8g61 #8/L5 A 3759 N3 8g61 #8/S2 G 1826 N2 -0.307 3.187
8g5y #5/S2 G 1709 N9 8g5y #5/S2 G 1826 N2 -0.308 3.588
8g6j #9/S2 U 1830 OP1 8g6j #9/S2 G 1059 N1 -0.309 2.969
8g5z #7/S2 U 1827 O4' 8g5z #7/L5 A 3759 O4' -0.310 3.230
8g5y #5/L5 A 3759 N3 8g5y #5/S2 U 1827 C1' -0.310 3.830
8g60 #6/S2 G 1709 C6 8g60 #6/S2 G 1826 O6 -0.312 3.342
8g60 #6/S2 G 1826 O6 8g60 #6/S2 C 1708 N4 -0.312 2.972
8g6j #9/S2 G 1709 C4 8g6j #9/S2 G 1826 C2 -0.315 3.535
8g60 #6/S2 G 1849 C5' 8g60 #6/S2 U 1061 O4 -0.316 3.616
8g60 #6/L5 C 3767 O2' 8g60 #6/S2 C 1828 C5' -0.316 3.656
8g6j #9/S2 G 1709 N9 8g6j #9/S2 G 1826 N2 -0.316 3.596
8g60 #6/S2 G 1849 C2 8g60 #6/L5 A 3766 O2' -0.317 3.387
8g61 #8/L5 A 3759 C1' 8g61 #8/S2 U 1827 O4' -0.318 3.658
8g5z #7/L5 A 3759 O4' 8g5z #7/S2 U 1827 C4' -0.318 3.658
8g6j #9/S2 G 1826 C2 8g6j #9/S2 G 1709 C2 -0.319 3.539
8g60 #6/S2 G 1709 O6 8g60 #6/S2 G 1826 O6 -0.321 3.161
8g60 #6/S2 MA6 1850 C2' 8g60 #6/S2 U 1707 C1' -0.321 4.081
8g6j #9/S2 U 1827 O2 8g6j #9/S2 C 1708 O2 -0.321 3.161
8g60 #6/S2 U 1827 O4 8g60 #6/S2 U 1707 O4 -0.322 3.162
8g60 #6/S2 G 1849 C6 8g60 #6/L5 C 3767 C5' -0.322 3.812
8g60 #6/L5 A2M 3760 N9 8g60 #6/S2 G 1826 O4' -0.324 3.424
8g5y #5/S2 G 1849 N2 8g5y #5/S2 U 1707 C2 -0.324 3.574
8g5y #5/L5 A2M 3760 C6 8g5y #5/S2 G 1826 O4' -0.324 3.394
8g61 #8/L5 A2M 3760 C4 8g61 #8/S2 G 1826 C5' -0.325 3.815
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 C6 -0.327 3.547
8g5y #5/S2 G 1709 C6 8g5y #5/S2 G 1826 O6 -0.328 3.358
8g6j #9/S2 G 1826 N9 8g6j #9/S2 G 1709 N2 -0.329 3.609
8g6j #9/L5 A 3759 C2' 8g6j #9/S2 G 1826 O2' -0.330 3.670
8g6j #9/S2 G 1709 C6 8g6j #9/S2 G 1826 O6 -0.331 3.361
8g6j #9/S2 G 1826 C4 8g6j #9/S2 G 1709 C2 -0.331 3.551
8g60 #6/S2 G 1849 C8 8g60 #6/L5 C 3767 P -0.331 4.191
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 O4' -0.333 3.673
8g61 #8/S2 G 1826 N1 8g61 #8/S2 C 1708 C2 -0.333 3.583
8g5y #5/S2 MA6 1850 O2' 8g5y #5/S2 U 1707 O4' -0.337 2.857
8g6j #9/L5 C 3767 C4' 8g6j #9/S2 C 1828 O2' -0.337 3.677
8g5z #7/L5 C 3767 C4' 8g5z #7/S2 C 1828 O2' -0.338 3.678
8g60 #6/S2 G 1709 N1 8g60 #6/S2 G 1826 N1 -0.338 3.618
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 C2 -0.339 3.559
8g60 #6/S2 G 1709 O4' 8g60 #6/L5 A 3759 N1 -0.340 3.440
8g61 #8/S2 U 1827 C1' 8g61 #8/L5 A 3759 N3 -0.340 3.860
8g5y #5/S2 G 1826 C2 8g5y #5/S2 G 1709 N3 -0.341 3.591
8g6j #9/S2 G 1826 N3 8g6j #9/S2 G 1709 C2 -0.341 3.591
8g61 #8/S2 G 1826 C5 8g61 #8/S2 G 1709 N1 -0.342 3.592
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A2M 3760 C5 -0.342 3.832
8g60 #6/S2 G 1826 C5' 8g60 #6/L5 A2M 3760 C2 -0.344 3.984
8g5y #5/S2 G 1826 C4' 8g5y #5/L5 A2M 3760 N3 -0.344 3.864
8g61 #8/L5 C 3767 C5' 8g61 #8/S2 G 1849 C5 -0.346 3.836
8g6j #9/S2 C 1708 C1' 8g6j #9/L5 A 3766 C1' -0.348 4.108
8g61 #8/S2 G 1849 C2 8g61 #8/L5 C 3767 C5' -0.348 3.838
8g5z #7/S2 C 1708 C1' 8g5z #7/L5 A 3766 C1' -0.348 4.108
8g6j #9/L5 A2M 3760 N6 8g6j #9/S2 G 1826 C5' -0.351 3.871
8g6j #9/S2 U 1827 C1' 8g6j #9/L5 A 3759 C1' -0.352 4.112
8g6j #9/S2 MA6 1850 C4' 8g6j #9/S2 U 1707 C4' -0.353 4.113
8g61 #8/L5 A 3759 C4' 8g61 #8/S2 G 1826 O2' -0.353 3.693
8g61 #8/S2 G 1709 C2 8g61 #8/S2 G 1826 N1 -0.353 3.603
8g61 #8/L5 A 3766 C1' 8g61 #8/S2 C 1708 C4' -0.354 4.114
8g61 #8/S2 C 1828 O4' 8g61 #8/L5 A 3766 C2 -0.354 3.574
8g61 #8/S2 MA6 1850 C2' 8g61 #8/S2 U 1707 O4' -0.355 3.695
8g61 #8/L5 A 3759 C5 8g61 #8/S2 G 1709 C4' -0.355 3.845
8g5y #5/S2 U 1827 C1' 8g5y #5/L5 A 3759 C1' -0.355 4.115
8g5y #5/S2 G 1849 C5' 8g5y #5/S2 U 1061 O4 -0.357 3.657
8g61 #8/S2 G 1709 C4 8g61 #8/S2 G 1826 N1 -0.359 3.609
8g60 #6/S2 G 1826 C5 8g60 #6/S2 G 1709 N1 -0.359 3.609
8g60 #6/S2 G 1849 N1 8g60 #6/L5 C 3767 C5' -0.359 3.879
8g5y #5/L5 A 3766 O2' 8g5y #5/S2 G 1849 C2 -0.359 3.429
8g5y #5/S2 G 1826 N2 8g5y #5/L5 A 3759 C2 -0.360 3.760
8g5z #7/L5 A 3759 C2 8g5z #7/S2 C 1708 C2' -0.360 4.000
8g5z #7/S2 G 1849 N3 8g5z #7/L5 C 3767 C5' -0.361 3.881
8g6j #9/S2 G 1849 N3 8g6j #9/L5 C 3767 C5' -0.362 3.882
8g6j #9/S2 G 1709 N2 8g6j #9/S2 G 1826 C5 -0.362 3.612
8g61 #8/S2 G 1849 N1 8g61 #8/L5 C 3767 C5' -0.364 3.884
8g6j #9/L5 A 3759 C4 8g6j #9/S2 G 1826 N2 -0.365 3.615
8g5y #5/S2 G 1849 N1 8g5y #5/L5 C 3767 C5' -0.365 3.885
8g5y #5/S2 MA6 1850 C4' 8g5y #5/S2 U 1707 C4' -0.366 4.126
8g5y #5/S2 G 1849 C2 8g5y #5/L5 C 3767 C5' -0.366 3.856
8g61 #8/S2 G 1709 N2 8g61 #8/S2 G 1826 C5 -0.366 3.616
8g6j #9/S2 MA6 1850 O2' 8g6j #9/S2 U 1707 O4' -0.366 2.886
8g61 #8/S2 U 1827 O4' 8g61 #8/L5 A 3759 C4' -0.369 3.709
8g5y #5/S2 G 1826 C1' 8g5y #5/L5 A 3759 O2' -0.369 3.709
8g5z #7/S2 G 1849 C2 8g5z #7/L5 C 3767 C5' -0.373 3.863
8g6j #9/S2 G 1849 C2 8g6j #9/L5 C 3767 C5' -0.373 3.863
8g61 #8/S2 G 1709 N3 8g61 #8/S2 G 1826 C2 -0.374 3.624
8g6j #9/S2 G 1709 C2 8g6j #9/S2 G 1826 C5 -0.375 3.595
8g5y #5/S2 U 1707 N1 8g5y #5/S2 MA6 1850 O2' -0.375 3.475
8g6j #9/L5 A 3759 C1' 8g6j #9/S2 G 1826 N2 -0.375 3.895
8g61 #8/L5 C 3767 OP1 8g61 #8/S2 G 1849 O4' -0.375 3.255
8g60 #6/S2 MA6 1850 O2' 8g60 #6/S2 U 1707 O4' -0.377 2.897
8g5y #5/L5 A2M 3760 N7 8g5y #5/S2 G 1826 C1' -0.377 3.897
8g5z #7/S2 U 1827 C1' 8g5z #7/L5 A 3759 C1' -0.381 4.141
8g60 #6/S2 G 1826 OP2 8g60 #6/L5 A2M 3760 C2 -0.382 3.562
8g61 #8/S2 G 1826 N2 8g61 #8/L5 A 3759 C2 -0.382 3.782
8g5z #7/L5 A 3766 C2 8g5z #7/S2 U 1827 C2' -0.383 4.023
8g6j #9/L5 A 3766 C2 8g6j #9/S2 U 1827 C2' -0.383 4.023
8g60 #6/L5 A 3759 C2 8g60 #6/S2 C 1708 C2' -0.383 4.023
8g5z #7/S2 G 1826 N2 8g5z #7/L5 A 3759 C2 -0.383 3.783
8g6j #9/S2 G 1709 O4' 8g6j #9/L5 A 3759 N1 -0.384 3.484
8g6j #9/S2 U 1827 O4 8g6j #9/S2 U 1707 O4 -0.384 3.224
8g6j #9/L5 A 3766 N9 8g6j #9/S2 C 1708 O2' -0.385 3.485
8g5z #7/L5 A 3766 N9 8g5z #7/S2 C 1708 O2' -0.385 3.485
8g60 #6/S2 G 1826 N9 8g60 #6/L5 A2M 3760 N7 -0.386 3.666
8g60 #6/S2 U 1830 OP1 8g60 #6/S2 G 1059 C6 -0.386 3.416
8g61 #8/S2 G 1826 C2 8g61 #8/S2 C 1708 N3 -0.386 3.636
8g61 #8/S2 G 1826 C6 8g61 #8/S2 C 1708 N3 -0.387 3.637
8g5z #7/L5 A 3766 C2' 8g5z #7/S2 G 1849 C2 -0.387 3.877
8g6j #9/L5 A 3766 C2' 8g6j #9/S2 G 1849 C2 -0.387 3.877
8g61 #8/L5 A 3766 N9 8g61 #8/S2 C 1708 O2' -0.387 3.487
8g60 #6/S2 G 1826 C2 8g60 #6/S2 G 1709 N3 -0.388 3.638
8g6j #9/L5 A 3759 C2 8g6j #9/S2 C 1708 C2' -0.388 4.028
8g5y #5/S2 G 1826 O4' 8g5y #5/L5 A2M 3760 N3 -0.390 3.490
8g6j #9/L5 A 3759 C5 8g6j #9/S2 G 1709 O4' -0.390 3.460
8g6j #9/L5 A2M 3760 C8 8g6j #9/S2 G 1826 C5' -0.390 4.030
8g5y #5/S2 G 1849 C6 8g5y #5/L5 C 3767 C5' -0.393 3.883
8g5y #5/S2 G 1709 C4 8g5y #5/S2 G 1826 N1 -0.393 3.643
8g5y #5/S2 G 1826 N1 8g5y #5/S2 C 1708 C2 -0.400 3.650
470 contacts
> select clear
> show #!1 models
> show #!2 models
> hide #!2 models
> show #!4 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
Drag select of 594 atoms, 654 bonds, 3 pseudobonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
36 contacts
atom1 atom2 overlap distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 0.178 3.002
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 -0.007 2.887
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 -0.052 2.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.075 2.775
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.107 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.117 3.337
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.117 3.877
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.139 2.839
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 -0.142 2.982
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.161 3.681
Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' -0.164 3.384
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.167 3.507
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.176 3.516
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' -0.189 3.409
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 -0.189 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.192 3.032
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 C4' -0.193 3.533
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.209 3.049
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2 Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.210 3.390
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 -0.223 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 -0.229 3.329
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.231 2.891
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.237 3.457
Mwt_class3_real_space_refined_003.cif #4/S2 G 1710 O3' Mwt_class3_real_space_refined_003.cif #4/L5 A 3420 N1 -0.238 3.338
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.251 4.011
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.254 2.954
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.265 2.925
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' -0.276 3.916
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.310 3.560
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 O2' -0.310 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.319 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C6 -0.325 3.395
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.369 4.009
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' -0.372 3.592
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.380 3.900
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 -0.393 3.453
36 contacts
> show #!2 models
> show #!3 models
Drag select of 1306 atoms, 1423 bonds, 45 pseudobonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
79 contacts
atom1 atom2 overlap distance
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 0.402 2.778
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 0.233 2.247
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 0.182 2.043
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 0.178 3.002
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 0.070 2.010
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' 0.062 2.438
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' 0.059 2.441
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 0.050 3.150
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 0.021 2.059
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 -0.007 2.887
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N3 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N1 -0.042 2.922
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' -0.048 3.268
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 -0.050 2.900
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 -0.052 2.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.075 2.775
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 -0.083 2.783
mwt_class2_real_space_refined_013.cif #3/S2 G 1830 O6 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 -0.084 2.924
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O4 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 O4 -0.087 3.047
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.104 2.804
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.107 2.767
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 -0.116 2.821
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.117 3.337
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.117 3.877
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1830 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 -0.118 3.078
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O4 mwt_class2_real_space_refined_013.cif #3/S2 U 1708 O4 -0.121 2.961
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.139 2.839
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 -0.142 2.982
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C1' -0.148 2.848
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.161 3.681
Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' -0.164 3.384
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N1 -0.165 3.270
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.167 3.507
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.176 3.516
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 -0.180 2.840
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.183 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' -0.189 3.409
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 -0.189 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.192 3.032
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 C4' -0.193 3.533
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' -0.193 3.393
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.200 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 -0.203 2.908
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.209 3.049
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2 Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.210 3.390
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2 mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 -0.222 3.402
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 -0.223 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 -0.229 3.329
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.231 2.891
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.236 2.736
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.237 3.457
Mwt_class3_real_space_refined_003.cif #4/S2 G 1710 O3' Mwt_class3_real_space_refined_003.cif #4/L5 A 3420 N1 -0.238 3.338
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 -0.251 2.951
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.251 4.011
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N4 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 -0.253 2.913
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.254 2.954
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.265 2.925
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' -0.276 3.916
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.288 3.613
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.289 2.289
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 -0.293 2.993
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' -0.295 2.995
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.310 3.560
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 O2' -0.310 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.319 3.019
mwt_class2_real_space_refined_013.cif #3/L5 C 3424 O2' mwt_class2_real_space_refined_013.cif #3/S2 C 1829 C4' -0.324 3.664
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C6 -0.325 3.395
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N1 -0.331 3.056
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O4' mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 -0.347 3.567
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.369 4.009
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' -0.371 2.371
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' -0.372 3.592
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 C2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 -0.375 3.625
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N9 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' -0.378 3.003
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.380 3.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 -0.384 3.709
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 -0.385 3.785
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 -0.386 3.711
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 -0.393 3.453
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 C2' -0.399 3.919
79 contacts
> select clear
> hide #!2 models
> hide #!3 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> show #!2 models
> show #!3 models
Drag select of 1306 atoms, 1423 bonds, 88 pseudobonds
> ui tool show Contacts
> contacts sel restrict both distanceOnly 2.999999999999999 interModel false
> intraMol false ignoreHiddenModels true color #000000 dashes 8 radius 0.015
> reveal true log true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
43 distances
atom1 atom2 distance
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 2.010
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 2.043
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 2.059
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 2.247
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 2.289
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' 2.371
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' 2.438
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 2.441
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 2.690
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 2.727
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 HO2' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' 2.735
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 2.736
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 2.775
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 2.778
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' 2.783
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 2.804
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 2.821
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 2.839
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 2.840
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' 2.848
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 H3 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 H3 2.880
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 2.883
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 2.887
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 2.891
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 2.908
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N4 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 2.913
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 H4' 2.917
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N3 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N1 2.922
mwt_class2_real_space_refined_013.cif #3/S2 G 1830 O6 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 2.924
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 2.925
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 2.932
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 2.951
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 2.954
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O4 mwt_class2_real_space_refined_013.cif #3/S2 U 1708 O4 2.961
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 2.982
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 O4' 2.991
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 2.993
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 2.995
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 2.997
43 distances
> select clear
> hide #!3 models
> hide #!2 models
Drag select of 594 atoms, 654 bonds, 13 pseudobonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
36 contacts
atom1 atom2 overlap distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 0.178 3.002
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 -0.007 2.887
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 -0.052 2.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.075 2.775
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.107 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.117 3.337
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.117 3.877
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.139 2.839
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 -0.142 2.982
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.161 3.681
Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' -0.164 3.384
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.167 3.507
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.176 3.516
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' -0.189 3.409
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 -0.189 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.192 3.032
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 C4' -0.193 3.533
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.209 3.049
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2 Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.210 3.390
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 -0.223 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 -0.229 3.329
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.231 2.891
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.237 3.457
Mwt_class3_real_space_refined_003.cif #4/S2 G 1710 O3' Mwt_class3_real_space_refined_003.cif #4/L5 A 3420 N1 -0.238 3.338
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.251 4.011
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.254 2.954
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.265 2.925
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' -0.276 3.916
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.310 3.560
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 O2' -0.310 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.319 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C6 -0.325 3.395
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.369 4.009
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' -0.372 3.592
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.380 3.900
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 -0.393 3.453
36 contacts
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.2 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
15 distances
atom1 atom2 distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 2.775
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 2.839
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 2.887
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 2.891
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 2.925
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 2.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 2.954
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 2.982
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 3.002
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 3.032
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 3.049
15 distances
> hide #!4 models
> show #!4 models
> show #!3 models
> show #!2 models
Drag select of 1301 atoms, 1422 bonds, 24 pseudobonds
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.2 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
62 distances
atom1 atom2 distance
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 2.010
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 2.043
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 2.059
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 2.247
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H1' 2.289
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' 2.371
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' 2.438
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' 2.441
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 2.690
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 2.727
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 HO2' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' 2.735
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 2.736
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 2.767
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 2.775
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 2.778
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' 2.783
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 2.804
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 2.821
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 2.839
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 2.840
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' 2.848
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 H3 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 H3 2.880
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 2.883
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 2.887
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 2.891
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 2.908
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N4 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 2.913
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 H4' 2.917
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N3 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N1 2.922
mwt_class2_real_space_refined_013.cif #3/S2 G 1830 O6 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 2.924
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 2.925
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 2.932
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 2.951
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 2.954
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O4 mwt_class2_real_space_refined_013.cif #3/S2 U 1708 O4 2.961
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 2.982
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 O4' 2.991
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 2.993
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 2.995
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 2.997
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 3.002
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N9 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' 3.003
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 3.006
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 3.032
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 H3 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 O4 3.036
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O4 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 O4 3.047
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 3.049
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N1 3.056
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1830 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 3.078
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H4' 3.091
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2' 3.148
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 3.150
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N4 3.150
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 3.170
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' 3.181
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C1' 3.186
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 O4' 3.189
62 distances
> hide #!2 models
> hide #!3 models
> hide #!1 models
> show #!1 models
> hide #!1 models
> show #!1 models
> show #!2 models
> show #!3 models
> hide #!1 models
> hide #!4 models
> show #!1 models
> show #!4 models
> select clear
Drag select of 1278 atoms, 1389 bonds, 71 pseudobonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
79 contacts
atom1 atom2 overlap distance
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 0.402 2.778
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 0.233 2.247
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 0.182 2.043
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 0.178 3.002
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 0.070 2.010
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' 0.062 2.438
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' 0.059 2.441
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 0.050 3.150
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 0.021 2.059
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N1 -0.007 2.887
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N3 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N1 -0.042 2.922
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' -0.048 3.268
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 -0.050 2.900
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N1 -0.052 2.932
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.075 2.775
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2' mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 -0.083 2.783
mwt_class2_real_space_refined_013.cif #3/S2 G 1830 O6 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 -0.084 2.924
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O4 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 O4 -0.087 3.047
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.104 2.804
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.107 2.767
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 -0.116 2.821
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.117 3.337
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.117 3.877
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1830 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 -0.118 3.078
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O4 mwt_class2_real_space_refined_013.cif #3/S2 U 1708 O4 -0.121 2.961
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.139 2.839
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O4 Mwt_class3_real_space_refined_003.cif #4/S2 U 1708 O4 -0.142 2.982
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C1' -0.148 2.848
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N1 -0.161 3.681
Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2' -0.164 3.384
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N1 -0.165 3.270
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1709 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C1' -0.167 3.507
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.176 3.516
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 -0.180 2.840
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.183 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2' -0.189 3.409
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 O4 -0.189 3.029
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1830 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.192 3.032
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 C4' -0.193 3.533
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3424 O2' -0.193 3.393
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.200 2.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O6 -0.203 2.908
Mwt_class3_real_space_refined_003.cif #4/S2 G 1830 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.209 3.049
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 O2 Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.210 3.390
mwt_class2_real_space_refined_013.cif #3/S2 U 1828 O2 mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 -0.222 3.402
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 N2 -0.223 2.883
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 -0.229 3.329
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 N4 Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O6 -0.231 2.891
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.236 2.736
Mwt_class3_real_space_refined_003.cif #4/S2 C 1829 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C2 -0.237 3.457
Mwt_class3_real_space_refined_003.cif #4/S2 G 1710 O3' Mwt_class3_real_space_refined_003.cif #4/L5 A 3420 N1 -0.238 3.338
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 H42 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 -0.251 2.951
Mwt_class3_real_space_refined_003.cif #4/S2 C 1709 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 C1' -0.251 4.011
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 N4 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O6 -0.253 2.913
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.254 2.954
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 N4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O6 -0.265 2.925
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 C2' -0.276 3.916
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 -0.288 3.613
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' -0.289 2.289
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H1 -0.293 2.993
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' -0.295 2.995
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 N2 -0.310 3.560
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3424 O2' -0.310 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' -0.319 3.019
mwt_class2_real_space_refined_013.cif #3/L5 C 3424 O2' mwt_class2_real_space_refined_013.cif #3/S2 C 1829 C4' -0.324 3.664
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C6 -0.325 3.395
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1828 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N1 -0.331 3.056
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 O4' mwt_class2_real_space_refined_013.cif #3/L5 A 3423 C2 -0.347 3.567
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1829 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 C2 -0.369 4.009
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' -0.371 2.371
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3420 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1710 O3' -0.372 3.592
mwt_class2_real_space_refined_013.cif #3/S2 C 1829 C2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 N2 -0.375 3.625
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 N9 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1709 HO2' -0.378 3.003
Mwt_class3_real_space_refined_003.cif #4/S2 U 1828 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 3423 N1 -0.380 3.900
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 C6 -0.384 3.709
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3423 C2 -0.385 3.785
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1829 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 N1 -0.386 3.711
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3423 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1828 O2 -0.393 3.453
mwt_class2_real_space_refined_013.cif #3/L5 A 3423 N1 mwt_class2_real_space_refined_013.cif #3/S2 U 1828 C2' -0.399 3.919
79 contacts
> select clear
> hide #!3 models
> hide #!2 models
> show #!2 models
> show #!3 models
> hide #!4 models
> hide #!1 models
> show #!1 models
> show #!4 models
> show #!5 models
> show #!7 models
> show #!8 models
> show #!9 models
> show #!6 models
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> hide #!5-9 atoms
> undo
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B2a_Male.cxs
> hide #!5-9 atoms
> select clear
[Repeated 1 time(s)]
> show #!1 models
> show #!2 models
> show #!3 models
> show #!4 models
> hide atoms
> select #1-4/L5:3355-3357
285 atoms, 309 bonds, 12 residues, 4 models selected
> show sel atoms
> view sel
> style sel stick
Changed 285 atom styles
> select #1-4/S2:1052-1053
202 atoms, 222 bonds, 8 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 202 atom styles
> select clear
> select #5-9/S2:1051
115 atoms, 125 bonds, 5 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 115 atom styles
> select #5-9/L5:3699
100 atoms, 105 bonds, 5 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 100 atom styles
> select clear
Drag select of 702 atoms, 761 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
10 contacts
atom1 atom2 overlap distance
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1053 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3357 OP1 -0.083 2.583
8g5y #5/L5 C 3699 C5' 8g5y #5/S2 G 1051 O3' -0.120 3.460
8g5y #5/L5 C 3699 OP1 8g5y #5/S2 G 1051 C4' -0.154 3.454
8g60 #6/L5 C 3699 OP1 8g60 #6/S2 G 1051 C4' -0.155 3.455
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1053 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3357 OP1 -0.198 3.398
mwt_class2_real_space_refined_013.cif #3/L5 C 3357 OP1 mwt_class2_real_space_refined_013.cif #3/S2 A 1053 C4' -0.252 3.552
8g60 #6/L5 C 3699 C5' 8g60 #6/S2 G 1051 O3' -0.260 3.600
8g60 #6/S2 G 1051 O2' 8g60 #6/L5 C 3699 C5' -0.314 3.654
8g5z #7/L5 C 3699 C5' 8g5z #7/S2 G 1051 O3' -0.398 3.738
8g6j #9/L5 C 3699 C5' 8g6j #9/S2 G 1051 O3' -0.399 3.739
10 contacts
> select clear
> hide #!5 models
> show #!5 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> show #!8 models
> show #!7 models
> hide #!7 models
> hide #!8 models
> show #!6 models
> show #!5 models
> show #!9 models
> show #!7 models
> hide #!9 models
> hide #!7 models
> hide #!6 models
> hide #!5 models
> hide #!3 models
> hide #!2 models
> show #!3 models
> show #!2 models
> hide #!1 models
> hide #!4 models
> show #!1 models
> show #!4 models
> hide #!2 models
> hide #!3 models
> show #!3 models
> show #!2 models
> hide #!1 models
> hide #!4 models
> hide #!3 models
> show #!3 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B2b_Male.cxs
> show #!1 models
> show #!4 models
> show #!5 models
> show #!6 models
> show #!7 models
> hide #!7 models
> show #!8 models
> show #!7 models
> show #!9 models
> hide atoms
> select #5-9/S2:938-939
210 atoms, 230 bonds, 10 residues, 5 models selected
> show sel atoms
> view sel
> show sel atoms
> style sel stick
Changed 210 atom styles
> select #5-9/Lp
3547 atoms, 3589 bonds, 19 pseudobonds, 463 residues, 10 models selected
> show sel cartoons
> select clear
> select #1-4/Lp
3550 atoms, 3586 bonds, 107 pseudobonds, 368 residues, 10 models selected
> show sel cartoons
> ~hbonds
> select clear
> select #1-4/S2:940-941
180 atoms, 192 bonds, 8 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 180 atom styles
> select clear
Drag select of 390 atoms, 171 residues, 422 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
28 contacts
atom1 atom2 overlap distance
mwt_class2_real_space_refined_013.cif #3/Lp ARG 85 CD mwt_class2_real_space_refined_013.cif #3/S2 U 940 C5' 0.218 3.542
8g5y #5/Lp ARG 85 CD (alt loc A) 8g5y #5/S2 U 939 C5' 0.144 3.616
8g6j #9/Lp ARG 85 NE 8g6j #9/S2 U 939 C5' 0.122 3.398
8g5z #7/Lp ARG 85 NE 8g5z #7/S2 U 939 C5' 0.121 3.399
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 941 P Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Lp ARG 85 NH1 -0.025 3.765
8g6j #9/Lp ARG 85 CZ 8g6j #9/S2 U 939 C5' -0.111 3.601
8g5z #7/Lp ARG 85 CZ 8g5z #7/S2 U 939 C5' -0.112 3.602
8g6j #9/Lp ARG 85 CD 8g6j #9/S2 U 939 C5' -0.119 3.879
8g5z #7/Lp ARG 85 CD 8g5z #7/S2 U 939 C5' -0.119 3.879
8g60 #6/Lp ARG 85 CD 8g60 #6/S2 U 939 C5' -0.123 3.883
mwt_class2_real_space_refined_013.cif #3/Lp ARG 85 NE mwt_class2_real_space_refined_013.cif #3/S2 U 940 C5' -0.134 3.654
mwt_class2_real_space_refined_013.cif #3/S2 U 940 C4' mwt_class2_real_space_refined_013.cif #3/Lp ARG 85 CD -0.203 3.963
8g6j #9/S2 U 939 O3' 8g6j #9/Lp ARG 85 NH2 -0.223 2.923
8g5z #7/S2 U 939 O3' 8g5z #7/Lp ARG 85 NH2 -0.223 2.923
8g5z #7/S2 U 939 C4' 8g5z #7/Lp ARG 85 NH2 -0.230 3.750
8g6j #9/S2 U 939 C4' 8g6j #9/Lp ARG 85 NH2 -0.230 3.750
8g5y #5/Lp ARG 85 NH1 (alt loc A) 8g5y #5/S2 U 939 P -0.250 3.990
mwt_class2_real_space_refined_013.cif #3/S2 U 940 C4' mwt_class2_real_space_refined_013.cif #3/Lp ARG 85 NE -0.256 3.776
8g6j #9/S2 U 939 C4' 8g6j #9/Lp ARG 85 NE -0.285 3.805
8g5z #7/S2 U 939 C4' 8g5z #7/Lp ARG 85 NE -0.285 3.805
8g60 #6/Lp ARG 85 NH2 8g60 #6/S2 U 939 P -0.299 4.039
8g60 #6/Lp ARG 85 CZ 8g60 #6/S2 A 938 O3' -0.314 3.384
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 941 OP2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Lp ARG 85 NH1 -0.317 2.977
8g5z #7/S2 U 939 C3' 8g5z #7/Lp ARG 85 NH2 -0.363 3.883
8g6j #9/S2 U 939 C3' 8g6j #9/Lp ARG 85 NH2 -0.363 3.883
8g60 #6/S2 U 939 P 8g60 #6/Lp ARG 85 CZ -0.369 4.079
8g6j #9/Lp ARG 85 NH2 8g6j #9/S2 U 939 C5' -0.387 3.907
8g5z #7/Lp ARG 85 NH2 8g5z #7/S2 U 939 C5' -0.387 3.907
28 contacts
> style sel stick
Changed 1880 atom styles
> select clear
> hide #!9 models
> hide #!7 models
> hide #!6 models
> hide #!5 models
> hide #!3 models
> hide #!4 models
> show #!4 models
> hide #!2 models
> show #!3 models
> hide #!3 models
> show #!3 models
> show #!2 models
> hide #!1 models
> hide #!4 models
> hide #!3 models
> show #!3 models
> hide #!2 models
> show #!2 models
> show #!1 models
> show #!4 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> show #!2 models
> show #!3 models
> hide #!2 models
> hide #!1 models
> show #!4 models
> hide #!3 models
> show #!2 models
> hide #!2 models
> show #!1 models
> show #!2 models
> show #!3 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B2c_Male.cxs
> show #!5 models
> show #!6 models
> show #!7 models
> show #!9 models
> hide atoms
> select clear
> hide cartoons
> select #1-4/S2:1720-1721, 1816
288 atoms, 312 bonds, 12 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 288 atom styles
> view sel
> select #1-4/L5:3456-3458, 3451-3453, 3285-3286, 3492
861 atoms, 937 bonds, 36 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 861 atom styles
> select #5-9/L5:3805-3807, 3794-3796, 3628-3629, 3834
960 atoms, 1055 bonds, 45 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 960 atom styles
> select #5-9/S2
180595 atoms, 201138 bonds, 867 pseudobonds, 9107 residues, 14 models selected
> select #5-9/S2:1815-1819, 1719-1721
870 atoms, 970 bonds, 40 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 870 atom styles
> select #5-9/S2:Ln
Nothing selected
> show cartoons
> undo
> select #1-4/S2:1718-1720
293 atoms, 321 bonds, 12 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 293 atom styles
> select #5/Ln#7/Ln#8/Ln#9/Ln
949 atoms, 951 bonds, 101 residues, 4 models selected
> show sel cartoons
> select #1-4/Ln
1239 atoms, 1243 bonds, 100 residues, 4 models selected
> show sel cartoons
> select clear
Drag select of 3173 atoms, 199 residues, 3488 bonds
> ui tool show Distances
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
387 contacts
atom1 atom2 overlap distance
8g61 #8/Ln ARG 23 NH2 8g61 #8/L5 A 3807 P 0.304 3.436
8g6j #9/Ln ARG 23 NH2 8g6j #9/L5 A 3807 P 0.259 3.481
8g5z #7/Ln ARG 23 NH2 8g5z #7/L5 A 3807 P 0.258 3.482
8g61 #8/Ln SER 24 OG 8g61 #8/S2 A 1719 C5' 0.246 3.094
8g5y #5/Ln ARG 23 NH2 8g5y #5/L5 A 3807 P 0.234 3.506
Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 N7 Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 N2 0.221 2.659
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C2' 0.188 3.137
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 O2' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' 0.184 2.416
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1720 H2 0.183 2.442
8g61 #8/S2 U 1720 O2' 8g61 #8/L5 U 3796 O2' 0.176 2.344
8g5y #5/S2 A 1719 N1 8g5y #5/L5 A 3795 O2' 0.157 2.543
8g60 #6/S2 A 1719 N1 8g60 #6/L5 A 3795 O2' 0.156 2.544
8g61 #8/Ln LEU 13 CD1 8g61 #8/S2 A 1818 O2' 0.151 3.189
8g60 #6/L5 A 3795 N3 8g60 #6/S2 A 1719 C2 0.147 3.253
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N7 0.121 2.104
8g61 #8/S2 U 1721 O2 8g61 #8/L5 A 3629 C4' 0.108 3.192
8g60 #6/S2 U 1721 O2 8g60 #6/L5 A 3629 C4' 0.106 3.194
8g5y #5/Ln ARG 23 NE 8g5y #5/L5 A 3807 P 0.102 3.638
Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 21 HH12 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 P 0.101 2.770
8g60 #6/L5 A 3795 C1' 8g60 #6/S2 A 1815 C1' 0.090 3.670
8g60 #6/S2 U 1720 O2' 8g60 #6/L5 U 3796 O2' 0.082 2.438
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 C2' 0.081 3.439
8g5z #7/S2 U 1721 O2 8g5z #7/L5 A 3629 C4' 0.077 3.223
8g6j #9/S2 A 1719 C5' 8g6j #9/Ln SER 24 OG 0.077 3.263
8g5z #7/S2 A 1719 C5' 8g5z #7/Ln SER 24 OG 0.077 3.263
8g6j #9/S2 U 1721 O2 8g6j #9/L5 A 3629 C4' 0.077 3.223
mwt_class2_real_space_refined_013.cif #3/S2 C 1718 O3' mwt_class2_real_space_refined_013.cif #3/Ln ARG 21 CD 0.076 3.264
8g5y #5/L5 A 3807 O2' 8g5y #5/S2 G 1816 C4' 0.074 3.266
8g5y #5/L5 A 3807 OP1 8g5y #5/Ln ARG 23 NE 0.072 2.588
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1720 C2 0.070 3.330
8g60 #6/S2 A 1719 C2 8g60 #6/S2 A 1815 C2 0.067 3.453
Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 N6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 C2' 0.065 3.455
8g5y #5/S2 A 1815 C2 8g5y #5/S2 A 1719 C2 0.062 3.458
8g5y #5/S2 U 1721 O2 8g5y #5/L5 A 3629 C4' 0.061 3.239
8g60 #6/L5 A 3807 O2' 8g60 #6/S2 G 1816 C4' 0.050 3.290
8g61 #8/S2 A 1815 O2' 8g61 #8/L5 C 3794 O2' 0.047 2.473
8g61 #8/L5 G 3806 N3 8g61 #8/S2 A 1815 C2 0.046 3.354
8g60 #6/L5 A 3795 C2' 8g60 #6/S2 A 1719 N1 0.044 3.476
mwt_class2_real_space_refined_013.cif #3/Ln ARG 21 NH1 mwt_class2_real_space_refined_013.cif #3/S2 G 1719 P 0.041 3.699
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 H4' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' 0.033 2.467
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1720 C2 0.029 3.296
mwt_class2_real_space_refined_013.cif #3/S2 A 1816 N7 mwt_class2_real_space_refined_013.cif #3/S2 G 1719 N2 0.028 2.852
8g61 #8/L5 A 3795 N3 8g61 #8/S2 A 1719 C2 0.024 3.376
Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1718 O3' Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 21 NH1 0.021 2.704
8g5y #5/L5 A 3795 N3 8g5y #5/S2 A 1719 C2 0.019 3.381
8g5y #5/L5 G 3806 N3 8g5y #5/S2 A 1815 C2 0.015 3.385
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 O2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 0.012 2.713
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 HO2' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 HO2' 0.011 1.989
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N7 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 N2 0.002 2.848
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 O4' -0.003 3.203
Mwt_class3_real_space_refined_003.cif #4/S2 C 1718 O3' Mwt_class3_real_space_refined_003.cif #4/Ln ARG 21 CD -0.006 3.346
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1721 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 U 3453 C4' -0.008 3.348
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 O4' -0.013 2.513
8g61 #8/L5 C 3794 C2' 8g61 #8/S2 A 1815 O2' -0.015 3.355
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 N7 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 N2 -0.015 2.895
8g5y #5/S2 A 1815 C2 8g5y #5/L5 G 3806 O2' -0.016 3.236
8g5y #5/S2 U 1721 C2 8g5y #5/L5 A 3629 C4' -0.020 3.510
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O2' -0.025 2.605
8g5y #5/S2 A 1819 C4' 8g5y #5/Ln LEU 13 CD2 -0.028 3.788
8g60 #6/S2 A 1815 O4' 8g60 #6/L5 A 3795 C4' -0.028 3.368
8g60 #6/L5 C 3794 C2' 8g60 #6/S2 A 1815 O2' -0.029 3.369
8g5z #7/L5 A 3807 O2' 8g5z #7/S2 G 1816 C4' -0.032 3.372
8g6j #9/L5 A 3807 O2' 8g6j #9/S2 G 1816 C4' -0.032 3.372
8g60 #6/S2 G 1816 O2' 8g60 #6/L5 A 3807 O2' -0.032 2.552
8g60 #6/L5 C 3834 C1' 8g60 #6/S2 U 1721 O4 -0.032 3.332
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C2' -0.034 2.734
8g5z #7/Ln LYS 16 NZ 8g5z #7/S2 A 1818 C5' -0.035 3.555
8g6j #9/Ln LYS 16 NZ 8g6j #9/S2 A 1818 C5' -0.036 3.556
Mwt_class3_real_space_refined_003.cif #4/Ln SER 24 OG Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 C5' -0.040 3.380
8g5y #5/L5 A 3795 C1' 8g5y #5/S2 A 1815 C1' -0.042 3.802
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3451 C2' -0.045 3.385
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2' -0.046 2.546
8g5z #7/Ln ARG 23 NE 8g5z #7/L5 A 3807 P -0.050 3.790
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1718 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 CG -0.050 3.390
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 C4' -0.050 3.250
8g6j #9/Ln ARG 23 NE 8g6j #9/L5 A 3807 P -0.050 3.790
8g61 #8/L5 A 3807 OP1 8g61 #8/Ln ARG 23 NH2 -0.052 2.712
8g61 #8/S2 A 1719 C1' 8g61 #8/L5 G 3806 C4' -0.053 3.813
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 N6 -0.054 2.754
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln SER 24 CB -0.054 3.814
8g5z #7/L5 C 3834 C1' 8g5z #7/S2 U 1721 O4 -0.055 3.355
8g6j #9/L5 C 3834 C1' 8g6j #9/S2 U 1721 O4 -0.055 3.355
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln LYS 25 CE Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 OP1 -0.057 3.357
8g5y #5/L5 C 3794 C2' 8g5y #5/S2 A 1815 O2' -0.061 3.401
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 P Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 21 NH1 -0.062 3.558
Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 21 HH12 Male_mutant_class2_real_space_refined_009.cif #2/S2 C 1718 O3' -0.063 2.163
8g6j #9/L5 A 3795 N3 8g6j #9/S2 A 1719 C2 -0.063 3.463
8g5z #7/L5 A 3795 N3 8g5z #7/S2 A 1719 C2 -0.063 3.463
8g5y #5/L5 A 3795 C2' 8g5y #5/S2 A 1719 N1 -0.068 3.588
8g61 #8/S2 A 1815 C2 8g61 #8/S2 A 1719 C2 -0.068 3.588
8g60 #6/S2 A 1815 C2 8g60 #6/L5 G 3806 O2' -0.070 3.290
8g5z #7/S2 A 1815 C2 8g5z #7/L5 G 3806 O2' -0.071 3.291
8g6j #9/S2 A 1815 C2 8g6j #9/L5 G 3806 O2' -0.071 3.291
8g5y #5/Ln LEU 13 CD1 8g5y #5/S2 A 1818 O2' -0.072 3.412
8g6j #9/S2 U 1721 O4 8g6j #9/L5 G 3628 N2 -0.072 2.732
8g5z #7/S2 U 1721 O4 8g5z #7/L5 G 3628 N2 -0.073 2.733
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 O4' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O4' -0.074 3.074
8g60 #6/L5 A 3795 O4' 8g60 #6/S2 A 1815 C1' -0.078 3.418
8g60 #6/S2 A 1815 O2' 8g60 #6/L5 C 3794 O2' -0.078 2.598
8g5y #5/S2 A 1815 O4' 8g5y #5/L5 A 3795 C4' -0.079 3.419
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 C2' -0.080 2.780
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 C2' -0.083 3.283
mwt_class2_real_space_refined_013.cif #3/S2 A 1816 C8 mwt_class2_real_space_refined_013.cif #3/S2 G 1719 N2 -0.083 3.483
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 O2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H61 -0.084 2.184
mwt_class2_real_space_refined_013.cif #3/S2 G 1719 O2' mwt_class2_real_space_refined_013.cif #3/S2 A 1816 N6 -0.086 2.786
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3451 O2' -0.087 3.427
8g61 #8/L5 A 3795 O4' 8g61 #8/S2 A 1815 C1' -0.090 3.430
8g5y #5/L5 G 3806 O2' 8g5y #5/S2 A 1719 C1' -0.090 3.430
mwt_class2_real_space_refined_013.cif #3/Ln SER 24 OG mwt_class2_real_space_refined_013.cif #3/S2 A 1720 C5' -0.091 3.431
8g5y #5/S2 A 1719 N3 8g5y #5/S2 A 1815 C2 -0.095 3.495
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 OP1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln LYS 25 CD -0.098 3.398
8g5z #7/L5 A 3795 O2' 8g5z #7/S2 A 1719 N1 -0.102 2.802
8g6j #9/L5 A 3795 O2' 8g6j #9/S2 A 1719 N1 -0.102 2.802
Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 C8 Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 N2 -0.103 3.503
8g61 #8/S2 G 1816 O2' 8g61 #8/L5 A 3807 O2' -0.103 2.623
8g5y #5/L5 A 3795 O4' 8g5y #5/S2 A 1815 C1' -0.105 3.445
8g61 #8/L5 A 3629 C4' 8g61 #8/S2 U 1721 C2 -0.106 3.596
8g5y #5/S2 A 1719 C2 8g5y #5/S2 A 1815 N3 -0.106 3.506
8g61 #8/L5 A 3629 O2' 8g61 #8/S2 U 1721 C1' -0.108 3.448
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1720 H2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 C2 -0.110 2.810
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 U 3453 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1721 O2' -0.111 2.631
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O2' -0.112 2.712
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H1' -0.116 2.816
8g5z #7/L5 A 3807 OP1 8g5z #7/Ln ARG 23 NE -0.118 2.778
8g6j #9/L5 A 3807 OP1 8g6j #9/Ln ARG 23 NE -0.118 2.778
8g61 #8/S2 A 1719 N3 8g61 #8/L5 G 3806 C1' -0.119 3.639
8g61 #8/L5 G 3806 C1' 8g61 #8/S2 A 1719 C1' -0.125 3.885
8g60 #6/L5 A 3629 O4' 8g60 #6/S2 U 1721 C2 -0.127 3.197
8g61 #8/S2 A 1819 C4' 8g61 #8/Ln LEU 13 CD2 -0.128 3.888
8g61 #8/Ln ARG 23 CZ 8g61 #8/L5 A 3807 OP1 -0.128 3.158
8g5y #5/S2 A 1719 C1' 8g5y #5/L5 G 3806 C4' -0.132 3.892
8g60 #6/S2 A 1719 N3 8g60 #6/S2 A 1815 C2 -0.133 3.533
8g5y #5/L5 A 3629 O4' 8g5y #5/S2 U 1721 C2 -0.133 3.203
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3451 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 O2' -0.135 3.475
8g60 #6/L5 A 3629 C4' 8g60 #6/S2 U 1721 C2 -0.135 3.625
8g60 #6/S2 A 1719 C2 8g60 #6/S2 A 1815 N3 -0.138 3.538
mwt_class2_real_space_refined_013.cif #3/S2 A 1816 N6 mwt_class2_real_space_refined_013.cif #3/S2 G 1719 C2' -0.138 3.658
8g5y #5/L5 G 3806 C1' 8g5y #5/S2 A 1719 C1' -0.144 3.904
8g5y #5/L5 G 3806 N2 8g5y #5/S2 A 1815 N3 -0.149 3.029
8g5y #5/L5 C 3834 C1' 8g5y #5/S2 U 1721 O4 -0.150 3.450
8g61 #8/L5 G 3806 O4' 8g61 #8/S2 A 1719 C1' -0.154 3.494
8g5y #5/S2 A 1719 C2 8g5y #5/L5 A 3795 O2' -0.154 3.374
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 O4' -0.154 3.494
8g61 #8/L5 A 3795 C1' 8g61 #8/S2 A 1815 C1' -0.155 3.915
8g61 #8/S2 A 1815 C2 8g61 #8/L5 G 3806 O2' -0.156 3.376
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 O2' Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 N6 -0.156 2.856
Male_mutant_class2_real_space_refined_009.cif #2/Ln SER 24 HG Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H4' -0.158 2.158
mwt_class2_real_space_refined_013.cif #3/L5 A 3452 O2' mwt_class2_real_space_refined_013.cif #3/S2 A 1720 N1 -0.158 2.858
8g61 #8/L5 G 3806 N2 8g61 #8/S2 A 1815 C2 -0.160 3.560
8g60 #6/S2 U 1721 N3 8g60 #6/L5 A 3629 C1' -0.161 3.681
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 C2' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' -0.162 3.362
8g6j #9/L5 A 3629 C4' 8g6j #9/S2 U 1721 C2 -0.163 3.653
8g5z #7/L5 A 3629 C4' 8g5z #7/S2 U 1721 C2 -0.164 3.654
8g5y #5/S2 A 1815 O2' 8g5y #5/L5 C 3794 O2' -0.164 2.684
8g5y #5/L5 A 3629 O2' 8g5y #5/S2 U 1721 C1' -0.164 3.504
8g60 #6/S2 G 1816 C2' 8g60 #6/L5 A 3807 O2' -0.167 3.507
8g61 #8/Ln ARG 23 NE 8g61 #8/L5 A 3807 OP1 -0.168 2.828
8g61 #8/L5 G 3806 C4' 8g61 #8/S2 A 1719 O2' -0.170 3.510
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 C4' -0.173 3.373
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 C3' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' -0.177 3.377
8g5y #5/Ln ARG 23 CD 8g5y #5/L5 A 3807 OP1 -0.178 3.478
8g5z #7/L5 A 3629 O4' 8g5z #7/S2 U 1721 C2 -0.179 3.249
8g6j #9/L5 G 3806 O2' 8g6j #9/S2 A 1719 C1' -0.179 3.519
8g5z #7/L5 G 3806 O2' 8g5z #7/S2 A 1719 C1' -0.179 3.519
8g6j #9/L5 A 3629 O4' 8g6j #9/S2 U 1721 C2 -0.179 3.249
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 C8 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 N2 -0.181 3.581
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 C1' Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 N6 -0.182 3.702
8g5y #5/S2 G 1816 O2' 8g5y #5/L5 A 3807 O2' -0.191 2.711
8g5z #7/Ln LYS 16 CD 8g5z #7/S2 A 1818 C5' -0.195 3.955
8g6j #9/Ln LYS 16 CD 8g6j #9/S2 A 1818 C5' -0.195 3.955
8g60 #6/L5 G 3806 N3 8g60 #6/S2 A 1815 C2 -0.196 3.596
8g6j #9/L5 A 3807 OP2 8g6j #9/Ln ARG 23 NH2 -0.198 2.858
8g5z #7/L5 C 3794 C2' 8g5z #7/S2 A 1815 O2' -0.198 3.538
8g5z #7/L5 A 3807 OP2 8g5z #7/Ln ARG 23 NH2 -0.198 2.858
8g6j #9/L5 C 3794 C2' 8g6j #9/S2 A 1815 O2' -0.198 3.538
8g5z #7/L5 C 3794 O2' 8g5z #7/S2 A 1815 C4' -0.200 3.540
8g6j #9/L5 C 3794 O2' 8g6j #9/S2 A 1815 C4' -0.200 3.540
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2' -0.200 3.400
8g6j #9/L5 A 3795 C1' 8g6j #9/S2 A 1815 C1' -0.202 3.962
8g60 #6/S2 A 1719 C2 8g60 #6/L5 A 3795 O2' -0.202 3.422
Mwt_class3_real_space_refined_003.cif #4/S2 U 1721 O2' Mwt_class3_real_space_refined_003.cif #4/L5 U 3453 C4' -0.203 3.543
8g5y #5/L5 U 3796 O2' 8g5y #5/S2 U 1720 O2' -0.203 2.723
8g5z #7/L5 A 3795 C1' 8g5z #7/S2 A 1815 C1' -0.203 3.963
mwt_class2_real_space_refined_013.cif #3/L5 C 3451 C2' mwt_class2_real_space_refined_013.cif #3/S2 A 1816 O2' -0.206 3.546
8g5y #5/L5 A 3807 OP2 8g5y #5/Ln ARG 23 NH2 -0.207 2.867
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1718 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 CD -0.210 3.970
8g60 #6/L5 U 3796 C2' 8g60 #6/S2 U 1720 O2' -0.211 3.551
8g60 #6/S2 A 1815 C1' 8g60 #6/L5 A 3795 C4' -0.211 3.971
8g60 #6/S2 U 1721 O4 8g60 #6/L5 G 3628 N2 -0.214 2.874
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 N6 -0.215 3.095
8g61 #8/L5 A 3795 O2' 8g61 #8/S2 A 1719 N1 -0.216 2.916
8g6j #9/S2 A 1818 C4' 8g6j #9/Ln LYS 16 CD -0.216 3.976
8g5z #7/S2 A 1818 C4' 8g5z #7/Ln LYS 16 CD -0.216 3.976
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 C5' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln SER 24 CB -0.219 3.979
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 N6 -0.223 3.743
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3451 O2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 O2' -0.224 2.704
8g60 #6/S2 G 1816 C1' 8g60 #6/L5 A 3807 O2' -0.224 3.564
8g6j #9/L5 G 3806 C4' 8g6j #9/S2 A 1719 O2' -0.225 3.565
8g5z #7/L5 G 3806 C4' 8g5z #7/S2 A 1719 O2' -0.225 3.565
8g61 #8/S2 A 1815 N1 8g61 #8/L5 G 3806 O2' -0.225 2.925
8g5y #5/L5 C 3794 C1' 8g5y #5/S2 A 1815 O2' -0.225 3.565
8g60 #6/S2 A 1815 N3 8g60 #6/S2 A 1719 N1 -0.227 3.507
8g5z #7/S2 G 1816 O2' 8g5z #7/L5 A 3807 O2' -0.228 2.748
8g6j #9/S2 G 1816 O2' 8g6j #9/L5 A 3807 O2' -0.228 2.748
Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 O2' Mwt_class3_real_space_refined_003.cif #4/L5 C 3451 C2' -0.230 3.570
8g6j #9/S2 A 1819 C4' 8g6j #9/Ln LEU 13 CD2 -0.230 3.990
8g5z #7/S2 A 1819 C4' 8g5z #7/Ln LEU 13 CD2 -0.231 3.991
8g5y #5/L5 G 3806 C2' 8g5y #5/S2 A 1815 C2 -0.231 3.871
mwt_class2_real_space_refined_013.cif #3/L5 C 3451 O2' mwt_class2_real_space_refined_013.cif #3/S2 A 1816 O2' -0.233 2.753
8g5z #7/S2 A 1818 O2' 8g5z #7/Ln LEU 13 CD1 -0.234 3.574
8g6j #9/S2 A 1818 O2' 8g6j #9/Ln LEU 13 CD1 -0.235 3.575
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 U 3453 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1721 O2' -0.236 3.576
8g6j #9/L5 U 3796 O2' 8g6j #9/S2 U 1720 O2' -0.236 2.756
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 O2' -0.237 2.337
8g5z #7/L5 U 3796 O2' 8g5z #7/S2 U 1720 O2' -0.237 2.757
8g60 #6/S2 U 1721 O2 8g60 #6/L5 A 3629 O4' -0.238 3.118
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1718 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 CG -0.240 3.580
8g6j #9/S2 G 1816 C1' 8g6j #9/L5 A 3807 O2' -0.241 3.581
8g5z #7/S2 G 1816 C1' 8g5z #7/L5 A 3807 O2' -0.241 3.581
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 -0.242 3.092
8g5y #5/L5 C 3794 O2' 8g5y #5/S2 A 1815 C4' -0.243 3.583
8g61 #8/L5 G 3806 N2 8g61 #8/S2 A 1815 N3 -0.244 3.124
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1720 N1 -0.247 2.947
8g6j #9/Ln SER 24 OG 8g6j #9/S2 A 1719 P -0.247 3.807
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 -0.247 3.572
Male_mutant_class2_real_space_refined_009.cif #2/L5 U 3453 HO2' Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1721 O2' -0.247 2.347
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 C1' -0.247 4.007
8g5z #7/Ln SER 24 OG 8g5z #7/S2 A 1719 P -0.248 3.808
8g6j #9/S2 U 1721 N3 8g6j #9/L5 A 3629 C1' -0.249 3.769
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 -0.249 2.874
8g61 #8/L5 A 3807 O2' 8g61 #8/S2 G 1816 C4' -0.250 3.590
8g5z #7/S2 U 1721 N3 8g5z #7/L5 A 3629 C1' -0.250 3.770
8g5z #7/S2 A 1719 C1' 8g5z #7/L5 G 3806 C4' -0.250 4.010
8g6j #9/S2 A 1719 C1' 8g6j #9/L5 G 3806 C4' -0.250 4.010
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O2' -0.252 3.452
8g5y #5/S2 A 1815 C1' 8g5y #5/L5 A 3795 C4' -0.252 4.012
8g61 #8/S2 U 1721 N1 8g61 #8/L5 A 3629 O2' -0.254 3.354
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 CD Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1718 O3' -0.255 3.595
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 C4' Mwt_class3_real_space_refined_003.cif #4/Ln SER 24 OG -0.257 3.597
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H62 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C2' -0.257 2.957
8g6j #9/L5 A 3795 O4' 8g6j #9/S2 A 1815 C1' -0.258 3.598
8g5z #7/L5 G 3806 C1' 8g5z #7/S2 A 1719 C1' -0.259 4.019
8g5z #7/L5 A 3795 O4' 8g5z #7/S2 A 1815 C1' -0.259 3.599
8g6j #9/L5 G 3806 C1' 8g6j #9/S2 A 1719 C1' -0.259 4.019
8g5y #5/Ln LEU 13 CD2 8g5y #5/S2 A 1819 C5' -0.260 4.020
8g61 #8/L5 U 3796 O2' 8g61 #8/S2 U 1720 C2' -0.260 3.600
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 HO2' -0.261 2.361
8g6j #9/L5 A 3795 C4' 8g6j #9/S2 A 1815 O4' -0.261 3.601
8g6j #9/Ln LYS 16 CE 8g6j #9/S2 A 1818 C5' -0.261 4.021
8g5z #7/L5 A 3795 C4' 8g5z #7/S2 A 1815 O4' -0.261 3.601
8g5z #7/Ln LYS 16 CE 8g5z #7/S2 A 1818 C5' -0.262 4.022
8g5y #5/S2 A 1815 N1 8g5y #5/L5 G 3806 O2' -0.262 2.962
8g60 #6/L5 G 3806 C4' 8g60 #6/S2 A 1719 C1' -0.262 4.022
Mwt_class3_real_space_refined_003.cif #4/L5 U 3453 O2' Mwt_class3_real_space_refined_003.cif #4/S2 U 1721 O2' -0.264 2.784
8g61 #8/Ln LEU 13 CD2 8g61 #8/S2 A 1819 O5' -0.265 3.605
8g5y #5/L5 G 3806 N2 8g5y #5/S2 A 1815 C2 -0.266 3.666
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H1' -0.266 2.266
8g5y #5/S2 A 1719 N3 8g5y #5/L5 G 3806 C1' -0.267 3.787
8g5y #5/S2 G 1816 C2' 8g5y #5/L5 A 3807 O2' -0.268 3.608
8g61 #8/L5 A 3795 C4' 8g61 #8/S2 A 1815 O4' -0.270 3.610
8g61 #8/L5 U 3796 C2' 8g61 #8/S2 U 1720 O2' -0.275 3.615
8g5y #5/S2 A 1815 N3 8g5y #5/S2 A 1719 N1 -0.276 3.556
8g5y #5/S2 G 1816 C1' 8g5y #5/L5 A 3807 O2' -0.276 3.616
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C1' -0.276 3.676
8g60 #6/L5 U 3796 C3' 8g60 #6/S2 U 1720 O2' -0.279 3.619
mwt_class2_real_space_refined_013.cif #3/L5 A 3452 C1' mwt_class2_real_space_refined_013.cif #3/S2 A 1816 C1' -0.280 4.040
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 O2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 HO2' -0.281 2.361
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 OP1 Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 21 HH12 -0.281 2.381
8g60 #6/L5 G 3806 C1' 8g60 #6/S2 A 1719 C1' -0.287 4.047
mwt_class2_real_space_refined_013.cif #3/L5 U 3453 O2' mwt_class2_real_space_refined_013.cif #3/S2 U 1721 O2' -0.288 2.808
8g60 #6/L5 A 3629 C1' 8g60 #6/S2 U 1721 C2 -0.289 3.779
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 C 3451 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1816 O2' -0.290 2.810
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H4' Male_mutant_class2_real_space_refined_009.cif #2/Ln SER 24 OG -0.291 2.791
8g61 #8/L5 A 3629 O4' 8g61 #8/S2 U 1721 C2 -0.291 3.361
8g60 #6/L5 A 3795 C4' 8g60 #6/S2 A 1815 C4' -0.295 4.055
8g5y #5/L5 G 3806 C4' 8g5y #5/S2 A 1719 O2' -0.296 3.636
8g5z #7/S2 A 1819 P 8g5z #7/Ln LEU 13 CD1 -0.299 4.279
8g6j #9/S2 A 1819 P 8g6j #9/Ln LEU 13 CD1 -0.299 4.279
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H61 -0.301 3.001
8g60 #6/L5 U 3796 O2' 8g60 #6/S2 U 1720 C2' -0.302 3.642
mwt_class2_real_space_refined_013.cif #3/S2 G 1719 P mwt_class2_real_space_refined_013.cif #3/Ln ARG 21 CD -0.305 4.285
8g5y #5/L5 G 3806 O4' 8g5y #5/S2 A 1719 C1' -0.307 3.647
8g60 #6/S2 A 1815 C2 8g60 #6/S2 A 1719 N1 -0.307 3.707
8g60 #6/S2 A 1719 C2 8g60 #6/L5 A 3795 C2' -0.307 3.947
Mwt_class3_real_space_refined_003.cif #4/Ln ARG 21 NH1 Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 P -0.308 4.048
8g5y #5/L5 A 3795 C4' 8g5y #5/S2 A 1815 C4' -0.308 4.068
8g6j #9/L5 G 3806 N2 8g6j #9/S2 A 1815 N3 -0.308 3.188
8g5z #7/L5 G 3806 N2 8g5z #7/S2 A 1815 N3 -0.309 3.189
8g6j #9/L5 G 3628 N2 8g6j #9/S2 U 1721 C4 -0.309 3.559
8g5z #7/L5 G 3628 N2 8g5z #7/S2 U 1721 C4 -0.310 3.560
mwt_class2_real_space_refined_013.cif #3/L5 A 3452 N3 mwt_class2_real_space_refined_013.cif #3/S2 A 1720 C2 -0.311 3.711
8g5z #7/S2 U 1721 O2 8g5z #7/L5 A 3629 O4' -0.311 3.191
8g5y #5/L5 G 3806 N3 8g5y #5/S2 A 1815 N3 -0.312 3.592
8g6j #9/S2 U 1721 O2 8g6j #9/L5 A 3629 O4' -0.312 3.192
8g6j #9/S2 G 1816 C2' 8g6j #9/L5 A 3807 O2' -0.313 3.653
8g5z #7/S2 G 1816 C2' 8g5z #7/L5 A 3807 O2' -0.314 3.654
8g5z #7/L5 C 3794 C1' 8g5z #7/S2 A 1815 O2' -0.314 3.654
8g6j #9/L5 C 3794 C1' 8g6j #9/S2 A 1815 O2' -0.314 3.654
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C8 -0.318 3.018
mwt_class2_real_space_refined_013.cif #3/S2 A 1720 C2 mwt_class2_real_space_refined_013.cif #3/L5 A 3452 O2' -0.318 3.538
8g61 #8/L5 G 3806 C2' 8g61 #8/S2 A 1815 C2 -0.318 3.958
8g61 #8/S2 A 1815 C1' 8g61 #8/L5 A 3795 C4' -0.319 4.079
8g61 #8/S2 A 1815 N3 8g61 #8/S2 A 1719 C2 -0.321 3.721
mwt_class2_real_space_refined_013.cif #3/Ln ARG 21 CD mwt_class2_real_space_refined_013.cif #3/S2 C 1718 C4' -0.323 4.083
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 H4' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O4' -0.324 2.824
8g5z #7/L5 A 3807 C3' 8g5z #7/S2 G 1816 O2' -0.326 3.666
8g5z #7/L5 A 3807 C2' 8g5z #7/S2 G 1816 O2' -0.326 3.666
8g6j #9/L5 A 3807 C2' 8g6j #9/S2 G 1816 O2' -0.326 3.666
8g6j #9/L5 A 3807 C3' 8g6j #9/S2 G 1816 O2' -0.327 3.667
8g5y #5/Ln ARG 23 CZ 8g5y #5/L5 A 3807 P -0.327 4.037
8g5y #5/S2 U 1721 N1 8g5y #5/L5 A 3629 O2' -0.329 3.429
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 U 3453 C3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1721 O2' -0.331 3.671
8g60 #6/L5 A 3807 C2' 8g60 #6/S2 G 1816 O2' -0.331 3.671
8g61 #8/L5 G 3806 O2' 8g61 #8/S2 A 1719 C1' -0.332 3.672
8g61 #8/S2 A 1719 N3 8g61 #8/S2 A 1815 C2 -0.333 3.733
8g5y #5/L5 A 3629 C1' 8g5y #5/S2 U 1721 N3 -0.336 3.856
8g6j #9/L5 A 3795 C2' 8g6j #9/S2 A 1719 N1 -0.336 3.856
8g5z #7/L5 A 3795 C2' 8g5z #7/S2 A 1719 N1 -0.336 3.856
Mwt_class3_real_space_refined_003.cif #4/L5 C 3451 O2' Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 O2' -0.337 2.857
Male_mutant_class2_real_space_refined_009.cif #2/L5 C 3451 H1' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 O2' -0.337 2.837
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1720 C2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 3452 C2 -0.338 3.738
8g60 #6/L5 A 3795 O2' 8g60 #6/S2 A 1719 C6 -0.338 3.408
8g60 #6/L5 C 3794 O2' 8g60 #6/S2 A 1815 C4' -0.339 3.679
8g5z #7/S2 A 1815 O2' 8g5z #7/L5 C 3794 O2' -0.341 2.861
8g6j #9/S2 A 1815 O2' 8g6j #9/L5 C 3794 O2' -0.341 2.861
8g5z #7/L5 G 3806 N3 8g5z #7/S2 A 1815 C2 -0.344 3.744
8g6j #9/L5 G 3806 N3 8g6j #9/S2 A 1815 C2 -0.344 3.744
8g5z #7/Ln ARG 23 CZ 8g5z #7/L5 A 3807 P -0.347 4.057
8g6j #9/Ln ARG 23 CZ 8g6j #9/L5 A 3807 P -0.347 4.057
8g61 #8/S2 G 1816 C2' 8g61 #8/L5 A 3807 O2' -0.347 3.687
Mwt_class3_real_space_refined_003.cif #4/S2 C 1718 O2' Mwt_class3_real_space_refined_003.cif #4/Ln ARG 21 CG -0.348 3.688
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 C4' Male_mutant_class2_real_space_refined_009.cif #2/Ln SER 24 HG -0.349 3.049
8g60 #6/L5 G 3806 N2 8g60 #6/S2 A 1815 N3 -0.350 3.230
8g60 #6/S2 A 1719 N3 8g60 #6/L5 G 3806 C1' -0.351 3.871
8g60 #6/S2 A 1815 N1 8g60 #6/S2 A 1719 C4 -0.352 3.602
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C8 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 N2 -0.352 3.677
8g61 #8/L5 C 3794 O2' 8g61 #8/S2 A 1815 C2' -0.353 3.693
8g5z #7/L5 A 3807 O3' 8g5z #7/S2 G 1816 O2' -0.356 2.876
8g6j #9/L5 A 3807 O3' 8g6j #9/S2 G 1816 O2' -0.356 2.876
8g5y #5/S2 U 1721 C6 8g5y #5/L5 A 3629 O2' -0.357 3.577
8g5y #5/L5 A 3807 OP1 8g5y #5/Ln ARG 23 CZ -0.358 3.388
8g5y #5/S2 A 1815 N1 8g5y #5/S2 A 1719 C4 -0.358 3.608
8g5z #7/Ln LEU 13 CD1 8g5z #7/S2 A 1818 O3' -0.358 3.698
8g6j #9/Ln LEU 13 CD1 8g6j #9/S2 A 1818 O3' -0.359 3.699
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H22 -0.361 3.061
8g60 #6/L5 A 3795 C2 8g60 #6/S2 A 1719 C2 -0.362 3.882
8g60 #6/L5 A 3629 O2' 8g60 #6/S2 U 1721 C1' -0.362 3.702
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 OP2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 N2 -0.366 3.091
8g61 #8/L5 A 3795 C2' 8g61 #8/S2 A 1719 N1 -0.366 3.886
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 C5' Mwt_class3_real_space_refined_003.cif #4/Ln SER 24 CB -0.367 4.127
8g60 #6/L5 C 3794 C1' 8g60 #6/S2 A 1815 O2' -0.371 3.711
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 HO2' Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 N6 -0.375 3.000
8g5y #5/L5 A 3629 C4' 8g5y #5/S2 U 1721 C1' -0.376 4.136
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 NE Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 C 1718 C4' -0.377 3.897
8g5z #7/L5 A 3807 C1' 8g5z #7/S2 A 1815 C2 -0.378 4.018
8g6j #9/L5 A 3807 C1' 8g6j #9/S2 A 1815 C2 -0.378 4.018
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 H21 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 OP2 -0.379 2.479
8g60 #6/L5 G 3806 O2' 8g60 #6/S2 A 1719 C1' -0.379 3.719
8g61 #8/L5 A 3629 C1' 8g61 #8/S2 U 1721 N3 -0.380 3.900
Mwt_class3_real_space_refined_003.cif #4/S2 G 1719 P Mwt_class3_real_space_refined_003.cif #4/Ln ARG 21 CD -0.382 4.362
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1719 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1816 H62 -0.384 2.609
8g5y #5/L5 A 3795 O2' 8g5y #5/S2 A 1719 C6 -0.384 3.454
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1720 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 C2 -0.384 3.904
8g5y #5/S2 A 1719 C2 8g5y #5/L5 A 3795 C2' -0.386 4.026
Mwt_class3_real_space_refined_003.cif #4/L5 C 3451 C1' Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 O2' -0.386 3.726
mwt_class2_real_space_refined_013.cif #3/S2 G 1719 C1' mwt_class2_real_space_refined_013.cif #3/S2 A 1816 N6 -0.386 3.906
8g6j #9/L5 C 3794 O2 8g6j #9/S2 A 1815 O2' -0.387 2.867
8g5z #7/L5 C 3794 O2 8g5z #7/S2 A 1815 O2' -0.388 2.868
8g5y #5/L5 A 3629 C5' 8g5y #5/S2 U 1721 O2 -0.388 3.688
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1720 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3452 C2' -0.389 3.909
8g60 #6/S2 A 1719 C4 8g60 #6/S2 A 1815 C2 -0.391 3.761
8g5z #7/L5 U 3796 O4' 8g5z #7/S2 A 1719 C2 -0.392 3.612
8g6j #9/L5 U 3796 O4' 8g6j #9/S2 A 1719 C2 -0.392 3.612
Mwt_class3_real_space_refined_003.cif #4/S2 A 1816 C4' Mwt_class3_real_space_refined_003.cif #4/L5 C 3451 O2' -0.393 3.733
8g60 #6/L5 G 3628 N2 8g60 #6/S2 U 1721 C4 -0.393 3.643
8g60 #6/S2 A 1815 C2' 8g60 #6/L5 C 3794 O2' -0.393 3.733
Mwt_class3_real_space_refined_003.cif #4/S2 A 1720 C2 Mwt_class3_real_space_refined_003.cif #4/L5 A 3452 O2' -0.394 3.614
8g61 #8/S2 A 1819 P 8g61 #8/Ln LEU 13 CD1 -0.395 4.375
8g6j #9/Ln LEU 13 CD2 8g6j #9/S2 A 1819 O5' -0.395 3.735
8g5z #7/Ln LEU 13 CD2 8g5z #7/S2 A 1819 O5' -0.395 3.735
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1719 P Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 21 NE -0.395 4.135
mwt_class2_real_space_refined_013.cif #3/S2 C 1718 C3' mwt_class2_real_space_refined_013.cif #3/Ln ARG 21 CD -0.396 4.156
8g60 #6/L5 G 3806 C2' 8g60 #6/S2 A 1815 C2 -0.398 4.038
8g5y #5/L5 A 3807 O4' 8g5y #5/S2 A 1815 C2 -0.398 3.618
8g60 #6/L5 G 3806 O4' 8g60 #6/S2 A 1719 C1' -0.399 3.739
8g6j #9/L5 A 3629 C1' 8g6j #9/S2 U 1721 C2 -0.399 3.889
8g5z #7/L5 A 3629 C1' 8g5z #7/S2 U 1721 C2 -0.399 3.889
387 contacts
> style sel stick
Changed 5359 atom styles
> select clear
> hide #!7 models
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> hide #!1 models
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> show #!2 models
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> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B3.cxs
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
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> hide cartoons
> hide atoms
> select #1-4/L5:1377-1379
297 atoms, 329 bonds, 12 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 297 atom styles
> view sel
> select #1-4/S2:678-679,1029-1031
494 atoms, 542 bonds, 20 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 494 atom styles
> select #5-9/S2:677-678,1028-1029
440 atoms, 485 bonds, 20 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 440 atom styles
> select #5-9/L5:1563-1564
220 atoms, 245 bonds, 10 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 220 atom styles
> select clear
Drag select of 1451 atoms, 1601 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
411 contacts
atom1 atom2 overlap distance
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 0.407 2.843
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 0.393 2.887
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 0.363 2.887
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O2' 0.340 2.860
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C6 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 0.332 2.993
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H61 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 0.319 2.306
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 0.312 3.013
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 0.282 2.343
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 N2 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 0.275 3.005
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O2' 0.235 2.985
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C1' 0.219 3.421
8g6j #9/L5 A 1563 N6 8g6j #9/S2 A 1028 N6 0.219 3.061
8g5z #7/S2 A 1028 N6 8g5z #7/L5 A 1563 N6 0.218 3.062
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 0.196 2.429
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N1 0.194 3.326
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C4' Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C2 0.175 3.465
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N7 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 0.174 2.676
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C5 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 0.173 3.227
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C2 0.170 3.470
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 C4' 0.158 3.362
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 0.158 2.467
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 H22 0.154 2.471
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C5 0.147 3.053
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 HO2' 0.145 2.555
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C2 0.139 2.561
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C1' 0.138 3.187
8g5y #5/S2 G 1029 O2' 8g5y #5/L5 A 1564 N1 0.131 2.569
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C6 0.126 3.199
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 O5' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C2 0.126 3.094
8g5y #5/S2 A 1028 N7 8g5y #5/S2 G 677 N2 0.118 2.762
8g5y #5/S2 U 678 C6 8g5y #5/S2 A 1028 N6 0.117 3.283
Mwt_class3_real_space_refined_003.cif #4/L5 A 1379 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1031 C5' 0.113 3.407
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 0.109 3.216
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N7 0.103 2.122
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 0.098 1.902
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C2 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 O2' 0.094 3.126
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H1' 0.092 2.533
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N7 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N2 0.086 2.794
8g60 #6/S2 U 678 C6 8g60 #6/S2 A 1028 N6 0.085 3.315
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 0.083 3.167
8g61 #8/L5 A 1563 N6 8g61 #8/S2 A 1028 N6 0.081 3.199
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 0.080 3.320
8g61 #8/S2 G 1029 N2 8g61 #8/S2 G 677 C1' 0.079 3.441
8g60 #6/L5 A 1563 N6 8g60 #6/S2 A 1028 N6 0.069 3.211
8g61 #8/L5 A 1563 N1 8g61 #8/S2 G 1029 N2 0.065 2.815
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 0.062 3.338
8g61 #8/L5 A 1564 N6 8g61 #8/S2 G 1029 O2' 0.060 2.640
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 OP1 0.059 2.441
8g6j #9/S2 A 1028 N7 8g6j #9/S2 G 677 N2 0.056 2.824
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2 0.056 3.344
8g61 #8/S2 A 1028 N7 8g61 #8/S2 G 677 N2 0.052 2.828
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N7 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 O4' 0.051 3.074
8g5y #5/S2 A 1028 N1 8g5y #5/S2 U 678 C1' 0.047 3.473
8g5y #5/L5 A 1563 N6 8g5y #5/S2 A 1028 N1 0.042 2.838
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O3' 0.034 2.466
8g6j #9/S2 G 1029 O2' 8g6j #9/L5 A 1564 N1 0.028 2.672
8g5z #7/S2 G 1029 O2' 8g5z #7/L5 A 1564 N1 0.028 2.672
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 0.027 3.253
8g6j #9/S2 U 678 C6 8g6j #9/S2 A 1028 N6 0.023 3.377
mwt_class2_real_space_refined_013.cif #3/S2 U 679 C6 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 C6 0.020 3.350
8g60 #6/L5 A 1563 N6 8g60 #6/S2 A 1028 N1 0.019 2.861
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C6 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H61 0.018 2.682
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 0.015 3.310
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 0.014 2.866
8g5z #7/S2 A 1028 N1 8g5z #7/L5 A 1563 N6 0.012 2.868
8g6j #9/L5 A 1563 N6 8g6j #9/S2 A 1028 N1 0.011 2.869
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C2 0.011 3.209
8g5z #7/S2 U 678 C4' 8g5z #7/L5 A 1563 C8 0.003 3.637
8g61 #8/S2 U 678 O2 8g61 #8/S2 A 1028 C2 0.003 3.177
8g6j #9/S2 U 678 C4' 8g6j #9/L5 A 1563 C8 0.003 3.637
mwt_class2_real_space_refined_013.cif #3/S2 G 678 N2 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 0.002 3.278
8g5y #5/L5 A 1564 N1 8g5y #5/S2 G 1029 C2' 0.000 3.520
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C6 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 O2' -0.002 3.072
8g5y #5/S2 G 1029 N2 8g5y #5/S2 G 677 C1' -0.003 3.523
8g61 #8/S2 U 678 C2 8g61 #8/S2 A 1028 N1 -0.004 3.254
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 N2 -0.005 2.885
8g6j #9/L5 A 1563 N6 8g6j #9/S2 A 1028 C6 -0.006 3.256
8g5z #7/L5 A 1563 N6 8g5z #7/S2 A 1028 C6 -0.006 3.256
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H61 -0.006 2.006
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C5 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.008 3.408
8g60 #6/L5 A 1563 OP1 8g60 #6/S2 U 678 C4' -0.011 3.311
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N7 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 N2 -0.011 2.891
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 -0.018 2.718
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 -0.020 3.420
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 C6 -0.021 3.271
mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N7 mwt_class2_real_space_refined_013.cif #3/S2 G 678 N2 -0.021 2.901
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N1 Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 N2 -0.023 2.903
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.023 3.273
8g5y #5/S2 U 678 C5 8g5y #5/S2 A 1028 N6 -0.023 3.423
mwt_class2_real_space_refined_013.cif #3/S2 A 1029 C6 mwt_class2_real_space_refined_013.cif #3/S2 U 679 C5 -0.025 3.395
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.026 2.651
8g61 #8/L5 A 1564 N1 8g61 #8/S2 G 1029 C2' -0.027 3.547
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O2' -0.029 3.229
Mwt_class3_real_space_refined_003.cif #4/S2 A 1031 C4' Mwt_class3_real_space_refined_003.cif #4/L5 A 1379 N3 -0.030 3.550
8g60 #6/S2 U 678 C2 8g60 #6/S2 A 1028 C6 -0.031 3.251
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.036 3.286
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N1 -0.038 3.558
8g60 #6/L5 A 1563 N1 8g60 #6/S2 G 1029 N2 -0.040 2.920
8g60 #6/S2 U 678 C4' 8g60 #6/L5 A 1563 C8 -0.040 3.680
8g60 #6/S2 A 1028 N7 8g60 #6/S2 G 677 N2 -0.040 2.920
8g60 #6/S2 U 678 C5 8g60 #6/S2 A 1028 N6 -0.043 3.443
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2 -0.043 3.368
8g60 #6/S2 A 1028 N1 8g60 #6/S2 U 678 C1' -0.045 3.565
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 N2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 C6 -0.045 3.295
8g61 #8/S2 G 677 N2 8g61 #8/S2 A 1028 N6 -0.045 3.325
8g61 #8/S2 A 1028 C6 8g61 #8/S2 U 678 C2 -0.046 3.266
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.046 3.296
8g60 #6/L5 A 1563 N6 8g60 #6/S2 A 1028 C6 -0.047 3.297
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.051 3.331
8g5y #5/L5 A 1563 N6 8g5y #5/S2 A 1028 N6 -0.051 3.331
8g61 #8/L5 A 1564 C6 8g61 #8/S2 G 1029 O2' -0.052 3.122
8g5y #5/S2 G 677 N3 8g5y #5/S2 A 1028 N6 -0.057 2.937
8g61 #8/L5 A 1563 C2 8g61 #8/S2 G 677 C4' -0.058 3.698
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C2 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C1' -0.059 3.699
8g6j #9/S2 U 678 C5 8g6j #9/S2 A 1028 N6 -0.062 3.462
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.064 2.944
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 -0.065 3.390
Mwt_class3_real_space_refined_003.cif #4/L5 A 1379 C2 Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 O2' -0.067 3.287
8g6j #9/S2 U 678 O4' 8g6j #9/L5 A 1563 N7 -0.070 3.170
8g5z #7/S2 U 678 O4' 8g5z #7/L5 A 1563 N7 -0.071 3.171
8g5y #5/S2 U 678 C4' 8g5y #5/L5 A 1563 C8 -0.072 3.712
8g61 #8/S2 U 678 N3 8g61 #8/S2 A 1028 C6 -0.074 3.324
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O2' -0.077 3.277
8g6j #9/S2 G 677 N3 8g6j #9/S2 A 1028 N6 -0.080 2.960
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C2 -0.081 3.721
Mwt_class3_real_space_refined_003.cif #4/S2 A 1031 C5' Mwt_class3_real_space_refined_003.cif #4/L5 A 1379 C2 -0.082 3.722
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C6 -0.082 3.407
8g61 #8/S2 G 1029 O2' 8g61 #8/L5 A 1564 N1 -0.082 2.782
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2' -0.082 3.722
8g60 #6/S2 G 1029 N3 8g60 #6/L5 A 1563 N6 -0.086 2.966
mwt_class2_real_space_refined_013.cif #3/S2 U 679 C5 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 -0.086 3.486
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C6 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.086 3.486
8g60 #6/S2 G 677 N2 8g60 #6/S2 G 1029 C6 -0.087 3.337
mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N1 mwt_class2_real_space_refined_013.cif #3/S2 U 679 C6 -0.087 3.487
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2 -0.089 2.789
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C4 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.091 3.341
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O4' -0.092 3.292
8g6j #9/L5 A 1564 N1 8g6j #9/S2 G 1029 C2' -0.092 3.612
8g5z #7/L5 A 1564 N1 8g5z #7/S2 G 1029 C2' -0.093 3.613
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N3 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 -0.093 2.943
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N1 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.095 2.975
8g61 #8/S2 G 1029 N3 8g61 #8/L5 A 1563 N6 -0.099 2.979
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 -0.100 3.225
8g61 #8/L5 A 1563 N6 8g61 #8/S2 A 1028 N1 -0.101 2.981
8g5y #5/S2 U 678 C2 8g5y #5/S2 A 1028 C6 -0.102 3.322
8g5y #5/L5 A 1563 N6 8g5y #5/S2 A 1028 C6 -0.102 3.352
8g60 #6/S2 U 678 N1 8g60 #6/S2 A 1028 N6 -0.102 3.382
8g60 #6/S2 G 1029 O2' 8g60 #6/L5 A 1564 N1 -0.108 2.808
8g61 #8/S2 G 677 N3 8g61 #8/S2 A 1028 N6 -0.109 2.989
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 HO2' -0.110 2.110
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1378 N1 -0.110 3.630
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N6 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 -0.113 3.393
8g61 #8/L5 A 1563 N6 8g61 #8/S2 A 1028 C6 -0.113 3.363
8g5z #7/L5 A 1563 C5 8g5z #7/S2 G 677 O2' -0.119 3.189
8g6j #9/L5 A 1563 C5 8g6j #9/S2 G 677 O2' -0.119 3.189
8g60 #6/S2 G 1029 N2 8g60 #6/S2 G 677 C1' -0.121 3.641
mwt_class2_real_space_refined_013.cif #3/S2 A 1029 C5 mwt_class2_real_space_refined_013.cif #3/S2 U 679 C5 -0.121 3.491
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 -0.122 3.447
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 -0.125 3.450
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 -0.125 3.005
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O2' -0.126 3.326
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 O4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C8 -0.129 3.329
8g5y #5/S2 A 1028 N6 8g5y #5/S2 G 677 C2' -0.130 3.650
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.131 3.381
8g5y #5/L5 A 1564 C6 8g5y #5/S2 G 1029 O2' -0.136 3.206
mwt_class2_real_space_refined_013.cif #3/S2 U 679 C6 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 -0.136 3.536
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.137 3.417
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 H22 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C6 -0.143 2.843
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N6 -0.143 3.468
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C5 -0.143 2.843
8g61 #8/L5 A 1563 C6 8g61 #8/S2 G 677 O2' -0.144 3.214
8g60 #6/S2 U 678 N3 8g60 #6/S2 A 1028 C5 -0.145 3.395
mwt_class2_real_space_refined_013.cif #3/S2 G 678 N3 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 -0.146 3.026
8g5y #5/S2 U 678 N1 8g5y #5/S2 A 1028 N6 -0.146 3.426
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C2 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C6 -0.148 3.368
8g6j #9/S2 A 1028 N1 8g6j #9/S2 U 678 C1' -0.153 3.673
mwt_class2_real_space_refined_013.cif #3/S2 U 679 C4' mwt_class2_real_space_refined_013.cif #3/L5 A 1377 C8 -0.153 3.793
8g61 #8/S2 U 678 O2 8g61 #8/S2 A 1028 N1 -0.154 3.214
8g5y #5/S2 A 1028 C6 8g5y #5/S2 U 678 N1 -0.155 3.405
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 N1 -0.156 3.676
8g5y #5/L5 A 1563 N1 8g5y #5/S2 G 1029 N2 -0.161 3.041
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 -0.161 2.386
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O2' -0.165 3.235
8g61 #8/L5 A 1563 C5 8g61 #8/S2 G 677 O2' -0.167 3.237
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N1 mwt_class2_real_space_refined_013.cif #3/S2 G 1030 N2 -0.170 3.050
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N1 -0.171 3.496
8g6j #9/L5 A 1564 C6 8g6j #9/S2 G 1029 O2' -0.172 3.242
8g5z #7/L5 A 1564 C6 8g5z #7/S2 G 1029 O2' -0.172 3.242
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 H22 -0.173 2.173
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H1' -0.173 2.798
Mwt_class3_real_space_refined_003.cif #4/S2 A 1031 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 C2 -0.175 3.395
8g61 #8/S2 U 678 N3 8g61 #8/S2 A 1028 N6 -0.175 3.455
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O3' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 C2 -0.177 3.377
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 -0.179 2.879
8g5z #7/S2 G 1029 N3 8g5z #7/L5 A 1563 N6 -0.181 3.061
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1378 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 O2' -0.181 2.881
8g6j #9/S2 G 1029 N3 8g6j #9/L5 A 1563 N6 -0.181 3.061
8g6j #9/L5 A 1563 N1 8g6j #9/S2 G 1029 N2 -0.181 3.061
8g5z #7/L5 A 1563 N1 8g5z #7/S2 G 1029 N2 -0.181 3.061
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 C5 mwt_class2_real_space_refined_013.cif #3/S2 G 678 O2' -0.183 3.253
8g61 #8/S2 U 678 C5 8g61 #8/S2 A 1028 N6 -0.183 3.583
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 -0.187 3.037
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 C6 -0.188 3.438
8g5y #5/S2 G 1029 N3 8g5y #5/L5 A 1563 N6 -0.188 3.068
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 O2' -0.189 3.409
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C4' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 OP1 -0.191 3.391
8g60 #6/S2 A 1028 C6 8g60 #6/S2 U 678 N1 -0.191 3.441
8g61 #8/S2 G 1029 C1' 8g61 #8/L5 A 1563 N6 -0.191 3.711
mwt_class2_real_space_refined_013.cif #3/L5 A 1378 N6 mwt_class2_real_space_refined_013.cif #3/S2 G 1030 O2' -0.192 2.892
8g5y #5/S2 U 678 N1 8g5y #5/S2 A 1028 N1 -0.193 3.473
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 N2 -0.193 3.473
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 N3 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.194 3.074
mwt_class2_real_space_refined_013.cif #3/L5 A 1378 N1 mwt_class2_real_space_refined_013.cif #3/S2 G 1030 C2' -0.195 3.715
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C6 -0.195 3.445
8g6j #9/L5 A 1563 N6 8g6j #9/S2 G 1029 N2 -0.195 3.475
8g5z #7/S2 G 1029 N2 8g5z #7/L5 A 1563 N6 -0.196 3.476
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C5 -0.197 3.522
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 C5' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C2 -0.199 3.839
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C2 -0.200 3.525
8g61 #8/L5 A 1563 N3 8g61 #8/S2 G 677 C4' -0.200 3.720
8g5y #5/L5 A 1563 C5 8g5y #5/S2 G 677 O2' -0.204 3.274
8g5y #5/L5 A 1563 C6 8g5y #5/S2 G 677 O2' -0.205 3.275
8g6j #9/L5 A 1563 C8 8g6j #9/S2 U 678 C5' -0.206 3.846
8g5z #7/L5 A 1563 C8 8g5z #7/S2 U 678 C5' -0.206 3.846
8g60 #6/L5 A 1563 C5 8g60 #6/S2 G 677 O2' -0.209 3.279
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2 -0.212 3.432
mwt_class2_real_space_refined_013.cif #3/S2 G 1030 N3 mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N6 -0.212 3.092
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C2 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.217 3.467
8g60 #6/S2 A 1028 N6 8g60 #6/S2 G 677 C2' -0.217 3.737
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.218 3.498
8g5y #5/L5 A 1563 C8 8g5y #5/S2 U 678 C5' -0.219 3.859
8g5y #5/S2 U 678 N3 8g5y #5/S2 A 1028 C5 -0.219 3.469
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N6 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N1 -0.221 3.101
8g60 #6/S2 U 678 C2 8g60 #6/S2 A 1028 N1 -0.221 3.471
8g6j #9/S2 U 678 C2 8g6j #9/S2 A 1028 C6 -0.224 3.444
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.225 3.550
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 O4' Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C2 -0.226 3.446
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N1 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 O2' -0.228 2.928
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.229 3.509
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 C6 -0.234 3.454
8g61 #8/S2 U 678 C4 8g61 #8/S2 A 1028 N6 -0.235 3.485
8g60 #6/S2 U 678 N1 8g60 #6/S2 A 1028 N1 -0.236 3.516
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1379 H2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O2' -0.237 2.737
8g60 #6/S2 U 678 N3 8g60 #6/S2 A 1028 C6 -0.237 3.487
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 HO2' -0.239 2.464
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C2 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2' -0.240 3.880
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C5 -0.240 2.940
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 N2 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.241 3.521
8g61 #8/S2 A 1028 C5 8g61 #8/S2 U 678 N3 -0.241 3.491
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N1 -0.241 3.491
8g6j #9/S2 U 678 O4' 8g6j #9/L5 A 1563 C8 -0.241 3.461
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 O2' -0.241 2.966
8g5z #7/S2 U 678 O4' 8g5z #7/L5 A 1563 C8 -0.241 3.461
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 -0.241 3.566
8g5z #7/L5 A 1564 N6 8g5z #7/S2 G 1029 O2' -0.242 2.942
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N6 -0.242 3.492
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1378 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 O2' -0.242 2.942
8g6j #9/L5 A 1564 N6 8g6j #9/S2 G 1029 O2' -0.242 2.942
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 N1 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N6 -0.243 3.523
8g6j #9/L5 A 1563 C6 8g6j #9/S2 G 677 O2' -0.243 3.313
8g5z #7/L5 A 1563 C6 8g5z #7/S2 G 677 O2' -0.243 3.313
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O2' -0.245 2.970
8g60 #6/L5 A 1564 N1 8g60 #6/S2 G 1029 C2' -0.249 3.769
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 C6 mwt_class2_real_space_refined_013.cif #3/S2 G 678 O2' -0.251 3.321
8g5y #5/S2 U 678 O4' 8g5y #5/L5 A 1563 N7 -0.251 3.351
8g60 #6/S2 G 677 N3 8g60 #6/S2 A 1028 N6 -0.252 3.132
8g61 #8/S2 U 678 N1 8g61 #8/S2 A 1028 N1 -0.254 3.534
8g60 #6/S2 A 1028 C2 8g60 #6/S2 U 678 O2 -0.255 3.435
8g61 #8/S2 G 1029 N2 8g61 #8/L5 A 1563 C2 -0.256 3.656
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 H22 -0.256 2.481
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2 -0.257 3.437
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.257 3.137
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C4 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O2' -0.259 3.329
8g60 #6/L5 A 1563 N7 8g60 #6/S2 U 678 O4' -0.259 3.359
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 C1' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1378 C2 -0.261 3.901
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.261 3.511
8g5y #5/L5 A 1563 N6 8g5y #5/S2 A 1028 C2 -0.261 3.661
8g61 #8/S2 A 1028 N1 8g61 #8/S2 U 678 C1' -0.261 3.781
8g61 #8/S2 U 678 C6 8g61 #8/S2 A 1028 N6 -0.263 3.663
8g6j #9/S2 U 678 N1 8g6j #9/S2 A 1028 N6 -0.264 3.544
8g60 #6/L5 A 1563 C6 8g60 #6/S2 G 677 O2' -0.264 3.334
8g60 #6/S2 G 1029 O6 8g60 #6/S2 G 677 C2 -0.264 3.294
8g5y #5/S2 G 677 N2 8g5y #5/S2 A 1028 N6 -0.265 3.545
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H61 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N3 -0.266 2.491
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N1 -0.266 3.786
8g5y #5/L5 A 1564 N6 8g5y #5/S2 G 1029 O2' -0.267 2.967
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.269 3.119
Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 N6 Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 O2' -0.270 2.970
8g60 #6/L5 A 1563 N6 8g60 #6/S2 G 1029 N2 -0.270 3.550
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1378 C6 -0.273 3.343
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C6 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 -0.277 3.677
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 O2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 C6 -0.278 3.478
Mwt_class3_real_space_refined_003.cif #4/S2 A 1031 C1' Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 C2 -0.278 3.918
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 HO2' -0.279 2.979
8g6j #9/S2 G 1029 N2 8g6j #9/S2 G 677 C1' -0.280 3.800
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 C6 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2 -0.281 3.501
8g6j #9/S2 G 677 N2 8g6j #9/S2 A 1028 N6 -0.281 3.561
8g5y #5/S2 A 1028 C5 8g5y #5/S2 U 678 C2 -0.282 3.502
8g60 #6/S2 A 1028 C5 8g60 #6/S2 U 678 C2 -0.284 3.504
8g5y #5/S2 G 677 C1' 8g5y #5/S2 A 1028 N6 -0.286 3.806
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C1' -0.287 3.687
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N6 mwt_class2_real_space_refined_013.cif #3/S2 G 1030 N2 -0.288 3.568
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H61 -0.288 2.988
Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N3 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C4' -0.289 3.809
8g60 #6/L5 A 1563 C2 8g60 #6/S2 G 677 C4' -0.292 3.932
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 H62 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.295 2.920
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N7 mwt_class2_real_space_refined_013.cif #3/S2 U 679 O4' -0.296 3.396
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2 -0.297 3.327
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 O6 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2 -0.299 3.329
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 C5 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N2 -0.300 3.550
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C6 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.302 3.552
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2' Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N1 -0.306 3.826
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C4' -0.307 3.827
8g5y #5/S2 U 678 C2 8g5y #5/S2 A 1028 N1 -0.308 3.558
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C6 -0.310 3.010
8g61 #8/L5 A 1563 N6 8g61 #8/S2 G 1029 N2 -0.311 3.591
8g61 #8/S2 A 1028 C2 8g61 #8/S2 U 678 C2 -0.311 3.681
8g6j #9/S2 A 1028 C6 8g6j #9/S2 U 678 N1 -0.313 3.563
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N6 -0.316 3.641
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C5 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 N2 -0.317 3.567
8g5y #5/L5 A 1563 C2 8g5y #5/S2 G 677 C4' -0.318 3.958
8g61 #8/S2 G 1029 C2' 8g61 #8/L5 A 1563 N6 -0.320 3.840
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 N1 -0.320 3.645
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C6 -0.321 3.721
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.321 3.571
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C5 -0.322 3.392
8g6j #9/S2 U 678 N1 8g6j #9/S2 A 1028 N1 -0.323 3.603
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C1' -0.324 3.664
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C8 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C4' -0.325 3.725
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 O2' -0.325 3.025
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 N6 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 C6 -0.326 3.576
Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 N1 Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 O2' -0.326 3.026
8g61 #8/S2 G 677 O4' 8g61 #8/L5 A 1563 C2 -0.326 3.546
8g60 #6/S2 U 678 O4' 8g60 #6/L5 A 1563 C8 -0.327 3.547
8g6j #9/S2 A 1028 C5 8g6j #9/S2 U 678 N3 -0.328 3.578
mwt_class2_real_space_refined_013.cif #3/S2 U 679 O4' mwt_class2_real_space_refined_013.cif #3/L5 A 1377 C8 -0.328 3.548
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C1' -0.329 3.654
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 C5 -0.329 3.579
8g60 #6/S2 G 1029 C6 8g60 #6/S2 G 677 C2 -0.329 3.549
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 N6 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 HO2' -0.330 2.955
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 C5 -0.331 3.401
8g60 #6/S2 G 1029 C2 8g60 #6/L5 A 1563 N6 -0.332 3.582
8g60 #6/S2 U 678 C2 8g60 #6/S2 A 1028 N6 -0.332 3.582
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 C2 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.332 3.582
8g61 #8/L5 A 1563 N1 8g61 #8/S2 G 677 C1' -0.335 3.855
8g5z #7/L5 A 1563 N7 8g5z #7/S2 U 678 C4' -0.336 3.856
8g6j #9/L5 A 1563 N7 8g6j #9/S2 U 678 C4' -0.337 3.857
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 N1 -0.337 3.662
8g6j #9/S2 G 677 C1' 8g6j #9/S2 A 1028 N6 -0.337 3.857
mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N6 mwt_class2_real_space_refined_013.cif #3/S2 G 678 C2 -0.344 3.594
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 H22 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C6 -0.345 3.045
8g5y #5/S2 U 678 N3 8g5y #5/S2 A 1028 C6 -0.346 3.596
8g60 #6/L5 A 1563 N6 8g60 #6/S2 A 1028 C2 -0.346 3.746
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C5 -0.347 3.047
8g5y #5/S2 A 1028 C2 8g5y #5/S2 U 678 C1' -0.348 3.988
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 N3 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C5 -0.349 3.599
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2 -0.349 3.599
8g60 #6/L5 A 1563 C8 8g60 #6/S2 U 678 C5' -0.350 3.990
8g61 #8/S2 U 678 C2 8g61 #8/S2 A 1028 N6 -0.350 3.600
8g61 #8/S2 A 1028 N6 8g61 #8/S2 G 677 C2 -0.351 3.601
8g5z #7/L5 A 1563 C2 8g5z #7/S2 G 677 C4' -0.352 3.992
Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C1' Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 N2 -0.352 3.872
8g6j #9/L5 A 1563 C2 8g6j #9/S2 G 677 C4' -0.352 3.992
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 HO2' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1378 C6 -0.352 3.052
8g61 #8/S2 G 677 C1' 8g61 #8/L5 A 1563 C2 -0.353 3.993
mwt_class2_real_space_refined_013.cif #3/S2 G 1030 N2 mwt_class2_real_space_refined_013.cif #3/S2 G 678 C1' -0.354 3.874
8g5y #5/S2 A 1028 C8 8g5y #5/S2 G 677 N2 -0.358 3.758
mwt_class2_real_space_refined_013.cif #3/L5 A 1377 C8 mwt_class2_real_space_refined_013.cif #3/S2 U 679 C5' -0.359 3.999
8g6j #9/S2 A 1028 N6 8g6j #9/S2 G 677 C2' -0.359 3.879
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 N1 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C1' -0.360 3.685
mwt_class2_real_space_refined_013.cif #3/S2 U 679 C5 mwt_class2_real_space_refined_013.cif #3/S2 A 1029 N7 -0.360 3.760
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 C1' Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C6 -0.360 3.760
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N1 -0.360 3.610
8g60 #6/S2 U 678 N3 8g60 #6/S2 A 1028 N6 -0.360 3.640
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 O2' Mwt_class3_real_space_refined_003.cif #4/L5 A 1378 C6 -0.362 3.432
8g60 #6/S2 G 677 C1' 8g60 #6/S2 A 1028 N6 -0.364 3.884
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 C5 -0.365 3.765
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 N1 -0.366 3.216
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 C5 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 N2 -0.367 3.617
8g5y #5/S2 G 1029 C6 8g5y #5/S2 G 677 N2 -0.367 3.617
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 O4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C8 -0.368 3.588
8g61 #8/L5 A 1563 C8 8g61 #8/S2 U 678 O4' -0.369 3.589
8g5y #5/L5 A 1563 N6 8g5y #5/S2 G 1029 N2 -0.370 3.650
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 P Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 C2 -0.371 4.231
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C5 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 O4' -0.373 3.573
8g61 #8/L5 A 1563 N7 8g61 #8/S2 U 678 O4' -0.374 3.474
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1379 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1031 C5' -0.374 3.894
8g61 #8/S2 G 1029 N2 8g61 #8/L5 A 1563 C6 -0.376 3.626
Mwt_class3_real_space_refined_003.cif #4/S2 U 679 C2 Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 N1 -0.377 3.627
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 678 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N6 -0.379 3.629
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 679 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1029 N1 -0.381 3.631
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 N3 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1030 C6 -0.382 3.707
mwt_class2_real_space_refined_013.cif #3/L5 A 1378 C2 mwt_class2_real_space_refined_013.cif #3/S2 A 1031 O4' -0.383 3.603
8g6j #9/S2 G 1029 C2 8g6j #9/L5 A 1563 N6 -0.385 3.635
8g5z #7/S2 G 1029 C2 8g5z #7/L5 A 1563 N6 -0.385 3.635
8g60 #6/S2 U 678 C4 8g60 #6/S2 A 1028 N6 -0.385 3.635
8g6j #9/S2 U 678 C2 8g6j #9/S2 A 1028 N1 -0.386 3.636
Male_mutant_class2_real_space_refined_009.cif #2/L5 A 1377 C2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 678 HO2' -0.386 3.086
8g5y #5/L5 A 1563 N7 8g5y #5/S2 U 678 C4' -0.386 3.906
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1030 N2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 1377 C6 -0.391 3.641
8g60 #6/S2 G 677 N3 8g60 #6/S2 G 1029 C6 -0.392 3.642
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 679 C4 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1029 H62 -0.393 3.093
8g60 #6/S2 U 678 O2 8g60 #6/S2 A 1028 N1 -0.394 3.454
8g5y #5/S2 U 678 C6 8g5y #5/S2 A 1028 C6 -0.394 3.764
Mwt_class3_real_space_refined_003.cif #4/S2 A 1029 C2 Mwt_class3_real_space_refined_003.cif #4/L5 A 1377 N6 -0.397 3.797
8g60 #6/S2 G 1029 N2 8g60 #6/L5 A 1563 C6 -0.397 3.647
mwt_class2_real_space_refined_013.cif #3/L5 A 1379 N3 mwt_class2_real_space_refined_013.cif #3/S2 A 1031 C5' -0.398 3.918
8g5y #5/S2 U 678 O2 8g5y #5/S2 A 1028 C2 -0.398 3.578
Mwt_class3_real_space_refined_003.cif #4/S2 G 1030 N1 Mwt_class3_real_space_refined_003.cif #4/S2 G 678 C2 -0.399 3.649
8g6j #9/S2 U 678 N3 8g6j #9/S2 A 1028 C6 -0.400 3.650
mwt_class2_real_space_refined_013.cif #3/L5 A 1378 C6 mwt_class2_real_space_refined_013.cif #3/S2 G 1030 O2' -0.400 3.470
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> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> hide atoms
> select #5-9/S2:1793
110 atoms, 120 bonds, 5 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 110 atom styles
> view sel
> select #5-9/LW
4745 atoms, 4815 bonds, 4 pseudobonds, 590 residues, 9 models selected
> show sel cartoons
> view sel
> select #1-4/LW
2612 atoms, 2664 bonds, 251 residues, 4 models selected
> show sel cartoons
> select clear
> select ~sel & ##selected
Nothing selected
> select ~sel & ##selected
Nothing selected
> select #1-4/S2
149019 atoms, 164657 bonds, 158 pseudobonds, 6242 residues, 9 models selected
> show sel cartoons
> hide sel cartoons
> select #1-4/S2:1795
91 atoms, 95 bonds, 4 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 91 atom styles
> select clear
[Repeated 1 time(s)]Drag select of 201 atoms, 84 residues, 215 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
4 contacts
atom1 atom2 overlap distance
8g61 #8/LW ARG 47 NH2 8g61 #8/S2 A 1793 C5' 0.284 3.236
8g61 #8/S2 A 1793 C4' 8g61 #8/LW ARG 47 NH2 0.221 3.299
8g61 #8/LW ARG 47 NE 8g61 #8/S2 A 1793 C4' -0.033 3.553
8g61 #8/LW ARG 47 CZ 8g61 #8/S2 A 1793 C4' -0.332 3.822
4 contacts
> style sel stick
Changed 1096 atom styles
> select clear
> hide #!8 models
> show #!8 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B6.cxs
> select clear
> hide atoms
> hide cartoons
> select #1-4/S2:970
90 atoms, 94 bonds, 4 residues, 4 models selected
> show sel atoms
[Repeated 1 time(s)]
> view sel
> style sel stick
Changed 90 atom styles
> select #5-9/S2:970
115 atoms, 125 bonds, 5 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 115 atom styles
> select #1-4/S2
149019 atoms, 164657 bonds, 61 pseudobonds, 6242 residues, 8 models selected
> show sel cartoons
> hide sel cartoons
> hide sel atoms
> select #1-4/S2:971
103 atoms, 111 bonds, 4 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 103 atom styles
> select #5-9/L5:3710-3711,3742
340 atoms, 375 bonds, 15 residues, 5 models selected
> show sel atoms
> style sel stick
Changed 340 atom styles
> select #1-4/L5
330231 atoms, 364979 bonds, 140 pseudobonds, 13687 residues, 8 models selected
> show sel cartoons
> hide sel cartoons
> select #1-4/L5:3368-3369, 3399
268 atoms, 293 bonds, 11 residues, 4 models selected
> show sel atoms
> style sel stick
Changed 268 atom styles
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> hide #!1 models
> hide #!4 models
> select #1-4/S2:971
103 atoms, 111 bonds, 4 residues, 4 models selected
> select clear
> show #!1 models
> show #!4 models
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
Drag select of 826 atoms, 904 bonds
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
100 contacts
atom1 atom2 overlap distance
8g61 #8/L5 G 3710 C4' 8g61 #8/S2 G 970 N2 0.398 3.122
8g61 #8/S2 G 970 N3 8g61 #8/L5 A 3711 C5' 0.332 3.188
8g5y #5/L5 A 3711 C1' 8g5y #5/S2 G 970 C5' 0.276 3.484
8g61 #8/L5 A 3711 C5' 8g61 #8/S2 G 970 C2 0.214 3.276
8g5y #5/S2 G 970 N7 8g5y #5/L5 A 3711 C6 0.211 3.039
8g5z #7/S2 G 970 O4' 8g5z #7/L5 A 3711 C1' 0.207 3.133
8g6j #9/S2 G 970 O4' 8g6j #9/L5 A 3711 C1' 0.206 3.134
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C6 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N1 0.165 3.085
8g61 #8/S2 G 970 N2 8g61 #8/L5 A 3711 C5' 0.152 3.368
8g5y #5/S2 G 970 N7 8g5y #5/L5 A 3711 C5 0.147 3.103
8g5y #5/L5 A 3711 C5 8g5y #5/S2 G 970 C8 0.136 3.234
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C5 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C6 0.070 3.150
8g61 #8/L5 G 3710 O4' 8g61 #8/S2 G 970 N2 0.064 2.636
8g5y #5/L5 A 3711 C4 8g5y #5/S2 G 970 C8 0.057 3.313
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 971 O6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/L5 A 3368 OP1 0.028 2.812
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N1 mwt_class2_real_space_refined_013.cif #3/S2 G 971 C5 0.026 3.224
8g60 #6/S2 G 970 C6 8g60 #6/L5 A 3711 N6 0.015 3.235
8g60 #6/S2 G 970 O4' 8g60 #6/L5 A 3711 C1' -0.001 3.341
mwt_class2_real_space_refined_013.cif #3/S2 G 971 O4' mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C1' -0.020 3.360
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C6 mwt_class2_real_space_refined_013.cif #3/S2 G 971 N7 -0.026 3.276
8g6j #9/S2 G 970 N1 8g6j #9/L5 A 3711 N6 -0.028 3.308
8g5z #7/S2 G 970 N1 8g5z #7/L5 A 3711 N6 -0.028 3.308
8g5z #7/L5 A 3711 C8 8g5z #7/S2 G 970 C8 -0.055 3.575
8g6j #9/L5 A 3711 C8 8g6j #9/S2 G 970 C8 -0.055 3.575
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C8 mwt_class2_real_space_refined_013.cif #3/S2 G 971 P -0.057 3.917
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C6 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N6 -0.079 3.329
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C6 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C6 -0.081 3.301
mwt_class2_real_space_refined_013.cif #3/S2 G 971 N7 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C5 -0.088 3.338
8g60 #6/S2 G 970 C4' 8g60 #6/L5 A 3711 C1' -0.094 3.854
8g5y #5/S2 G 970 C4' 8g5y #5/L5 A 3711 C1' -0.095 3.855
mwt_class2_real_space_refined_013.cif #3/S2 G 971 N3 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C2 -0.138 3.538
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C5 mwt_class2_real_space_refined_013.cif #3/S2 G 971 C8 -0.140 3.510
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C4 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C2 -0.141 3.511
8g6j #9/L5 A 3711 N9 8g6j #9/S2 G 970 O4' -0.167 3.267
8g5z #7/L5 A 3711 N9 8g5z #7/S2 G 970 O4' -0.167 3.267
8g6j #9/L5 A 3711 N1 8g6j #9/S2 G 970 N3 -0.171 3.451
8g5z #7/L5 A 3711 N1 8g5z #7/S2 G 970 N3 -0.172 3.452
8g5y #5/L5 A 3711 N7 8g5y #5/S2 G 970 C8 -0.174 3.574
8g5z #7/S2 G 970 C2 8g5z #7/L5 A 3711 N6 -0.175 3.425
8g6j #9/S2 G 970 C2 8g6j #9/L5 A 3711 N6 -0.175 3.425
8g5z #7/S2 G 970 N3 8g5z #7/L5 A 3711 C6 -0.187 3.437
8g6j #9/S2 G 970 N3 8g6j #9/L5 A 3711 C6 -0.188 3.438
8g5y #5/S2 G 970 O4' 8g5y #5/L5 A 3711 C1' -0.189 3.529
8g5z #7/L5 A 3711 C1' 8g5z #7/S2 G 970 C4' -0.190 3.950
8g6j #9/L5 A 3711 C1' 8g6j #9/S2 G 970 C4' -0.190 3.950
8g5z #7/L5 A 3711 N3 8g5z #7/S2 G 970 C1' -0.190 3.710
8g6j #9/L5 A 3711 N3 8g6j #9/S2 G 970 C1' -0.191 3.711
8g60 #6/L5 A 3711 N7 8g60 #6/S2 G 970 N3 -0.207 3.487
8g5z #7/L5 A 3711 C4 8g5z #7/S2 G 970 C1' -0.211 3.701
8g6j #9/L5 A 3711 C4 8g6j #9/S2 G 970 C1' -0.211 3.701
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N6 mwt_class2_real_space_refined_013.cif #3/S2 G 971 C5 -0.219 3.469
8g61 #8/L5 G 3710 C1' 8g61 #8/S2 G 970 N2 -0.225 3.745
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C2 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C2 -0.227 3.597
8g6j #9/S2 G 970 N7 8g6j #9/L5 A 3711 N7 -0.229 3.509
8g5z #7/S2 G 970 N7 8g5z #7/L5 A 3711 N7 -0.229 3.509
8g5y #5/S2 G 970 N7 8g5y #5/L5 A 3711 N7 -0.233 3.513
8g5y #5/L5 A 3711 C6 8g5y #5/S2 G 970 C8 -0.235 3.605
8g60 #6/L5 A 3711 C1' 8g60 #6/S2 G 970 C5' -0.252 4.012
8g6j #9/L5 A 3711 C5 8g6j #9/S2 G 970 C4 -0.253 3.473
8g5z #7/L5 A 3711 C5 8g5z #7/S2 G 970 C4 -0.254 3.474
8g5y #5/L5 A 3711 C8 8g5y #5/S2 G 970 C8 -0.254 3.774
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N7 mwt_class2_real_space_refined_013.cif #3/S2 G 971 C8 -0.260 3.660
8g5y #5/L5 A 3711 N1 8g5y #5/S2 G 970 N7 -0.261 3.541
8g61 #8/L5 A 3711 C2 8g61 #8/S2 G 970 N1 -0.264 3.664
8g60 #6/L5 A 3711 N9 8g60 #6/S2 G 970 O4' -0.271 3.371
8g5y #5/L5 A 3711 N9 8g5y #5/S2 G 970 C8 -0.277 3.677
8g6j #9/L5 A 3711 N7 8g6j #9/S2 G 970 C8 -0.279 3.679
8g5z #7/L5 A 3711 N7 8g5z #7/S2 G 970 C8 -0.280 3.680
8g5z #7/L5 A 3711 O2' 8g5z #7/S2 G 970 C5' -0.282 3.622
8g6j #9/L5 A 3711 O2' 8g6j #9/S2 G 970 C5' -0.282 3.622
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C2 mwt_class2_real_space_refined_013.cif #3/S2 G 971 C5 -0.306 3.676
8g5y #5/S2 G 970 C5 8g5y #5/L5 A 3711 C6 -0.315 3.535
mwt_class2_real_space_refined_013.cif #3/S2 G 971 N1 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C2 -0.315 3.715
8g6j #9/S2 G 970 C4 8g6j #9/L5 A 3711 C6 -0.317 3.537
8g5z #7/S2 G 970 C4 8g5z #7/L5 A 3711 C6 -0.317 3.537
8g5y #5/S2 G 970 C5 8g5y #5/L5 A 3711 N1 -0.319 3.569
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N9 mwt_class2_real_space_refined_013.cif #3/S2 G 971 O4' -0.321 3.421
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C4 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N1 -0.325 3.575
8g60 #6/L5 G 3710 O4' 8g60 #6/S2 G 970 N2 -0.326 3.026
8g60 #6/S2 G 970 N1 8g60 #6/L5 A 3711 N6 -0.327 3.607
8g5z #7/L5 A 3711 C6 8g5z #7/S2 G 970 C2 -0.334 3.554
8g6j #9/L5 A 3711 C6 8g6j #9/S2 G 970 C2 -0.335 3.555
8g5z #7/S2 G 970 C5 8g5z #7/L5 A 3711 N7 -0.339 3.589
8g6j #9/S2 G 970 C5 8g6j #9/L5 A 3711 N7 -0.339 3.589
8g5z #7/S2 G 970 N9 8g5z #7/L5 A 3711 C4 -0.348 3.598
8g6j #9/S2 G 970 N9 8g6j #9/L5 A 3711 C4 -0.348 3.598
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C5 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C5 -0.352 3.572
mwt_class2_real_space_refined_013.cif #3/S2 G 971 C4' mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C1' -0.356 4.116
8g6j #9/L5 A 3711 N6 8g6j #9/S2 G 970 C6 -0.357 3.607
8g5z #7/L5 A 3711 N6 8g5z #7/S2 G 970 C6 -0.358 3.608
8g60 #6/L5 A 3711 C6 8g60 #6/S2 G 970 C5 -0.358 3.578
mwt_class2_real_space_refined_013.cif #3/S2 G 971 N7 mwt_class2_real_space_refined_013.cif #3/L5 A 3368 N7 -0.360 3.640
8g5z #7/S2 G 970 N7 8g5z #7/L5 A 3711 C8 -0.364 3.764
8g6j #9/S2 G 970 N7 8g6j #9/L5 A 3711 C8 -0.365 3.765
8g61 #8/L5 A 3711 O4' 8g61 #8/S2 G 970 C4 -0.371 3.441
8g5y #5/L5 A 3711 N3 8g5y #5/S2 G 970 C8 -0.372 3.772
8g61 #8/S2 G 970 C4 8g61 #8/L5 A 3711 C5' -0.378 3.868
8g60 #6/L5 A 3711 N6 8g60 #6/S2 G 970 C5 -0.378 3.628
mwt_class2_real_space_refined_013.cif #3/L5 A 3368 C1' mwt_class2_real_space_refined_013.cif #3/S2 G 971 O5' -0.383 3.723
8g5y #5/S2 G 970 N7 8g5y #5/L5 A 3711 C4 -0.394 3.644
100 contacts
> select clear
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> show #!1 models
> show #!2 models
> show #!3 models
> show #!4 models
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> hide #!2 models
> hide #!3 models
> show #!2 models
> show #!3 models
> hide #!1 models
> hide #!4 models
> show #!1 models
> show #!4 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B7a.cxs
> hide #!1 models
> hide #!2 models
> hide #!3 models
> hide #!4 models
> show #!1 models
> show #!2 models
> show #!3 models
> show #!4 models
> show #!5 models
> show #!6 models
> show #!7 models
> show #!8 models
> show #!9 models
> hide atoms
> select #1-4/S2:459-470
1163 atoms, 1287 bonds, 48 residues, 4 models selected
> show sel cartoons
> show sel atoms
> hide sel cartoons
> style sel stick
Changed 1163 atom styles
> show sel cartoons
> hide sel atoms
> view sel
> select #5-9/S2
180595 atoms, 201138 bonds, 867 pseudobonds, 9107 residues, 14 models selected
> select #5-9/S2:459-470
1305 atoms, 1460 bonds, 60 residues, 5 models selected
> show sel cartoons
> select #5-9/LV
5057 atoms, 5119 bonds, 8 pseudobonds, 687 residues, 10 models selected
> show sel cartoons
> select #1-4/LV
4904 atoms, 4957 bonds, 524 residues, 4 models selected
> show sel cartoons
> select clear
Drag select of 558 residues
Drag select of 927 residues
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
21 contacts
atom1 atom2 overlap distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV SER 134 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C2 0.171 3.469
8g61 #8/S2 C 459 OP1 8g61 #8/LV ASN 31 CB 0.075 3.225
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 0.027 3.223
Mwt_class3_real_space_refined_003.cif #4/S2 A 466 C2 Mwt_class3_real_space_refined_003.cif #4/LV SER 134 CB 0.006 3.634
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 -0.009 2.889
8g61 #8/S2 C 459 OP1 8g61 #8/LV ASN 31 ND2 -0.032 2.692
Mwt_class3_real_space_refined_003.cif #4/S2 A 466 N3 Mwt_class3_real_space_refined_003.cif #4/LV SER 134 CB -0.058 3.578
8g61 #8/LV ASN 31 ND2 8g61 #8/S2 C 459 P -0.069 3.809
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N3 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV SER 134 CB -0.089 3.609
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 -0.106 3.386
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 -0.142 3.542
8g61 #8/LV SER 115 CB 8g61 #8/S2 A 460 OP2 -0.174 3.474
8g61 #8/LV ASN 31 CB 8g61 #8/S2 C 459 P -0.175 4.155
Mwt_class3_real_space_refined_003.cif #4/S2 C 460 OP2 Mwt_class3_real_space_refined_003.cif #4/LV ASN 31 ND2 -0.203 2.863
Mwt_class3_real_space_refined_003.cif #4/S2 A 459 P Mwt_class3_real_space_refined_003.cif #4/LV ASN 31 CB -0.272 4.252
Mwt_class3_real_space_refined_003.cif #4/S2 A 459 OP1 Mwt_class3_real_space_refined_003.cif #4/LV ASN 31 CB -0.296 3.596
Mwt_class3_real_space_refined_003.cif #4/S2 C 460 P Mwt_class3_real_space_refined_003.cif #4/LV ASN 31 ND2 -0.301 4.041
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 459 P Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ASN 31 CB -0.349 4.329
8g61 #8/LV ASN 31 CG 8g61 #8/S2 C 459 OP1 -0.358 3.388
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 459 OP1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ASN 31 CB -0.361 3.661
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C6 -0.397 3.647
21 contacts
> style sel stick
Changed 8841 atom styles
> select clear
> hide #!2 models
> hide #!3 models
> hide #!1 models
> show #!1 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
Drag select of 46 atoms, 217 residues, 47 bonds, 9 pseudobonds
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.2 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
1 distances
atom1 atom2 distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 2.889
1 distances
Drag select of 93 atoms, 487 residues, 91 bonds, 1 pseudobonds
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.5000000000000004 interModel false
> intraMol false ignoreHiddenModels true color #000000 dashes 8 radius 0.015
> reveal true log true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
9 distances
atom1 atom2 distance
8g61 #8/LV ASN 31 ND2 8g61 #8/S2 C 459 OP1 2.692
Mwt_class3_real_space_refined_003.cif #4/S2 C 460 OP2 Mwt_class3_real_space_refined_003.cif #4/LV ASN 31 ND2 2.863
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 2.889
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 3.223
8g61 #8/LV ASN 31 CB 8g61 #8/S2 C 459 OP1 3.225
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 N6 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV ARG 131 NH1 3.386
8g61 #8/LV ASN 31 CG 8g61 #8/S2 C 459 OP1 3.388
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 466 C2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LV SER 134 CB 3.469
8g61 #8/LV SER 115 CB 8g61 #8/S2 A 460 OP2 3.474
9 distances
> show #!2 models
> show #!3 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/B8.cxs
> select clear
> hide cartoons
> hide atoms
> select #1-4/SB
6906 atoms, 6987 bonds, 638 residues, 3 models selected
> show sel cartoons
> select #1-4/LG
8931 atoms, 9056 bonds, 4 pseudobonds, 899 residues, 8 models selected
> show sel cartoons
> view sel
> select clear
> select #1/LG#2/LG#3/LG#4/LG
8931 atoms, 9056 bonds, 4 pseudobonds, 899 residues, 8 models selected
> select #2/SB#3/SB#4/SB
6906 atoms, 6987 bonds, 638 residues, 3 models selected
> select clear
> select add #1
206875 atoms, 220931 bonds, 52 pseudobonds, 18039 residues, 3 models selected
> show sel cartoons
> view matrix models
> #1,1,0,0,-1.2403,0,1,0,-6.1149,0,0,1,-6.5635,#10,1,0,0,0,0,1,0,0,0,0,1,0
> undo
[Repeated 1 time(s)]
> select #5/S2#6/S2#7/S2#8/S2#9/S2
180595 atoms, 201138 bonds, 867 pseudobonds, 9107 residues, 14 models selected
> select clear
> select #1/B
3034 atoms, 1770 bonds, 1506 residues, 1 model selected
> show sel cartoons
> select clear
> select #5-9/LG
9569 atoms, 9734 bonds, 1197 residues, 5 models selected
> show sel cartoons
> select #5-9/SB
8962 atoms, 9094 bonds, 3 pseudobonds, 1106 residues, 8 models selected
> show sel cartoons
> select clear
Drag select of 216 residues
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.5 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
21 distances
atom1 atom2 distance
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 OG1 2.719
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 OG1 2.956
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG LYS 264 NZ Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 OG1 2.975
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 OG1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 CD 3.049
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B ILES 57 CG2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE1 3.180
8g6j #9/LG LYS 264 NZ 8g6j #9/SB GLN 92 OE1 3.181
8g5z #7/LG LYS 264 NZ 8g5z #7/SB GLN 92 OE1 3.182
Mwt_class3_real_space_refined_003.cif #4/LG GLU 260 OE1 Mwt_class3_real_space_refined_003.cif #4/SB ILE 57 CG1 3.210
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B ILES 57 CD1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE1 3.215
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 N Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG LYS 264 NZ 3.254
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 CG2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE1 3.272
8g5z #7/LG THR 263 OG1 8g5z #7/SB LEU 225 CB 3.390
8g6j #9/LG THR 263 OG1 8g6j #9/SB LEU 225 CB 3.390
Mwt_class3_real_space_refined_003.cif #4/SB THR 52 OG1 Mwt_class3_real_space_refined_003.cif #4/LG GLU 260 OE1 3.403
8g5z #7/LG THR 263 CB 8g5z #7/SB GLY 226 N 3.424
8g6j #9/LG THR 263 CB 8g6j #9/SB GLY 226 N 3.424
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B THRS 52 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG LYS 264 NZ 3.456
Mwt_class3_real_space_refined_003.cif #4/SB ILE 57 CG1 Mwt_class3_real_space_refined_003.cif #4/LG GLU 260 CD 3.463
Mwt_class3_real_space_refined_003.cif #4/LG GLU 260 OE2 Mwt_class3_real_space_refined_003.cif #4/SB ILE 57 CG1 3.463
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B GLYS 54 O Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG LYS 257 NZ 3.488
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/B ILES 57 CA Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/LG GLU 260 OE1 3.497
21 distances
> style sel stick
Changed 1829 atom styles
> select clear
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!9 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/eB8.cxs
> hide #!1-4,8 cartoons
> hide #!1-4,8 atoms
> select #1-4/SI
7079 atoms, 7184 bonds, 4 pseudobonds, 712 residues, 8 models selected
> show sel cartoons
> view sel
> select clear
> select #1-4/L5:4675
71 atoms, 74 bonds, 3 residues, 3 models selected
> show sel atoms
> style sel stick
Changed 71 atom styles
> select clear
> select #5-9/SI
8430 atoms, 8575 bonds, 1030 residues, 5 models selected
> show sel & #!8 cartoons
> show #!5 models
> show #!6 models
> show #!7 models
> show #!9 models
> show sel cartoons
> select clear
[Repeated 1 time(s)]
> hide cartoons
> hide atoms
> select #1-4/S2:872
70 atoms, 73 bonds, 3 residues, 3 models selected
> show sel atoms
> view sel
> style sel stick
Changed 70 atom styles
> select #1-4/LR
7120 atoms, 7184 bonds, 688 residues, 4 models selected
> show sel cartoons
Drag select of 8 atoms, 9 bonds
> select clear
> select add #4
205117 atoms, 220657 bonds, 80 pseudobonds, 16557 residues, 4 models selected
> select clear
> select add #4
205117 atoms, 220657 bonds, 80 pseudobonds, 16557 residues, 4 models selected
> show sel cartoons
> select clear
> hide atoms
> hide cartoons
> select #1-4/LW
2612 atoms, 2664 bonds, 251 residues, 4 models selected
> show sel cartoons
> select #1-4/LG
8931 atoms, 9056 bonds, 4 pseudobonds, 899 residues, 8 models selected
> select #1-4/SG
7827 atoms, 7913 bonds, 3 pseudobonds, 841 residues, 7 models selected
> show sel cartoons
> view sel
> select clear
Drag select of 207 residues
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.5 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
0 distances
atom1 atom2 distance
No distances
> select clear
> hide cartoons
> select #1-4/S2:1172-1176, 1184-1185, 1707-1708
880 atoms, 964 bonds, 36 residues, 4 models selected
> show sel atoms
> view sel
> style sel stick
Changed 880 atom styles
> select #1-4/Ln
1239 atoms, 1243 bonds, 100 residues, 4 models selected
> show sel cartoons
> select clear
Drag select of 512 atoms, 57 residues, 569 bonds
> ui tool show Contacts
> contacts sel restrict both distanceOnly 3.5 interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Ignore distances between atoms separated by 4 bonds or less
Detect intra-residue distances: False
Detect intra-molecule distances: False
39 distances
atom1 atom2 distance
Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 11 HD2 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1184 H5' 2.542
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 H5' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 SD 2.640
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1172 OP1 Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 HE1 2.795
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 H5'' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 SD 2.796
Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 1 HE2 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H4' 2.815
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1185 OP2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 11 NH2 2.872
Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 11 HD3 Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1184 H5' 2.938
Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 1 HE1 Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H4' 3.029
Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O3' Mwt_class3_real_space_refined_003.cif #4/Ln ARG 9 NH2 3.064
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 A 1184 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 11 NH2 3.089
mwt_class2_real_space_refined_013.cif #3/Ln LYS 14 NZ mwt_class2_real_space_refined_013.cif #3/S2 U 1173 OP1 3.096
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 C5' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 SD 3.106
Male_mutant_class2_real_space_refined_009.cif #2/S2 A 1184 H5' Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 11 CD 3.108
Mwt_class3_real_space_refined_003.cif #4/Ln LYS 14 NZ Mwt_class3_real_space_refined_003.cif #4/S2 U 1173 OP1 3.118
mwt_class2_real_space_refined_013.cif #3/Ln ARG 11 NH2 mwt_class2_real_space_refined_013.cif #3/S2 G 1185 OP1 3.123
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 9 NH2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O3' 3.170
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1708 OP1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 9 NH1 3.214
Mwt_class3_real_space_refined_003.cif #4/S2 U 1173 C5' Mwt_class3_real_space_refined_003.cif #4/Ln LYS 14 NZ 3.217
mwt_class2_real_space_refined_013.cif #3/Ln ARG 9 NH2 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O2' 3.243
mwt_class2_real_space_refined_013.cif #3/Ln LYS 14 CG mwt_class2_real_space_refined_013.cif #3/S2 A 1174 OP1 3.245
Mwt_class3_real_space_refined_003.cif #4/S2 U 1173 O5' Mwt_class3_real_space_refined_003.cif #4/Ln LYS 14 NZ 3.285
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 O5' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 1 HB2 3.286
Male_mutant_class2_real_space_refined_009.cif #2/S2 G 1707 H4' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 1 CE 3.286
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O3' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 9 NH1 3.306
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 G 1707 O2' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln ARG 9 NH2 3.315
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 H4' Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 SD 3.323
Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O5' Mwt_class3_real_space_refined_003.cif #4/Ln MET 1 CG 3.343
Mwt_class3_real_space_refined_003.cif #4/S2 A 1174 OP1 Mwt_class3_real_space_refined_003.cif #4/Ln LYS 14 CG 3.343
mwt_class2_real_space_refined_013.cif #3/Ln MET 10 CE mwt_class2_real_space_refined_013.cif #3/S2 G 1172 OP1 3.349
mwt_class2_real_space_refined_013.cif #3/Ln ARG 9 NH1 mwt_class2_real_space_refined_013.cif #3/S2 G 1707 O3' 3.355
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1173 C5' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln MET 10 CE 3.358
Mwt_class3_real_space_refined_003.cif #4/S2 G 1707 O2' Mwt_class3_real_space_refined_003.cif #4/Ln ARG 9 NH2 3.363
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/S2 U 1173 C4' Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/Ln MET 10 CE 3.366
Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 HE1 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 H5' 3.374
Male_mutant_class2_real_space_refined_009.cif #2/Ln MET 10 HG3 Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1173 H5'' 3.374
Mwt_class3_real_space_refined_003.cif #4/S2 U 1173 OP1 Mwt_class3_real_space_refined_003.cif #4/Ln LYS 14 CE 3.387
mwt_class2_real_space_refined_013.cif #3/S2 U 1708 OP1 mwt_class2_real_space_refined_013.cif #3/Ln ARG 9 NH1 3.422
mwt_class2_real_space_refined_013.cif #3/Ln MET 10 SD mwt_class2_real_space_refined_013.cif #3/S2 U 1173 C5' 3.429
Male_mutant_class2_real_space_refined_009.cif #2/S2 U 1708 OP1 Male_mutant_class2_real_space_refined_009.cif #2/Ln ARG 9 HH22 3.498
39 distances
> select clear
> hide #!3 models
> hide #!2 models
> hide #!4 models
> show #!4 models
> hide #!1 models
> show #!1 models
> show #!2 models
> hide #!4 models
> show #!3 models
> show #!4 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/Intersubunit_bridges/New_comparison/eB14.cxs
——— End of log from Wed May 6 14:47:26 2026 ———
opened ChimeraX session
> hide atoms
> hide cartoons
> select #1-9/SJ, SC
31606 atoms, 32146 bonds, 1 pseudobond, 3598 residues, 10 models selected
> show sel cartoons
> view sel
> select clear
Drag select of 403 residues
> ui tool show Contacts
> contacts sel restrict both interModel false intraMol false
> ignoreHiddenModels true color #000000 dashes 8 radius 0.015 reveal true log
> true
Allowed overlap: -0.4
H-bond overlap reduction: 0.4
Ignore contacts between atoms separated by 4 bonds or less
Detect intra-residue contacts: False
Detect intra-molecule contacts: False
122 contacts
atom1 atom2 overlap distance
mwt_class2_real_space_refined_013.cif #3/SC GLY 201 CA mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH1 0.447 3.073
8g61 #8/SC ARG 200 CG 8g61 #8/SJ LEU 98 CD2 0.323 3.437
mwt_class2_real_space_refined_013.cif #3/SC GLY 201 C mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH1 0.313 2.937
8g61 #8/SC GLY 201 CA 8g61 #8/SJ ARG 54 NH2 0.253 3.267
8g5y #5/SJ ASP 95 CG 8g5y #5/SC ILE 174 CD1 0.252 3.508
Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 C Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 NH2 0.217 3.108
8g61 #8/SC ARG 200 CB 8g61 #8/SJ LEU 98 CD2 0.210 3.550
mwt_class2_real_space_refined_013.cif #3/SC THR 202 CA mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH2 0.152 3.368
Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 C Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 HH22 0.146 2.554
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HH21 Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CG 0.136 2.564
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SC TRP 170 CH2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SJ THR 62 OG1 0.127 3.093
8g61 #8/SJ LEU 98 CD2 8g61 #8/SC ARG 200 O 0.120 3.180
8g5y #5/SJ ARG 54 NH1 8g5y #5/SC GLY 201 CA 0.118 3.402
8g6j #9/SC GLY 201 CA 8g6j #9/SJ ARG 54 NH2 0.108 3.412
8g5z #7/SC GLY 201 CA 8g5z #7/SJ ARG 54 NH2 0.108 3.412
8g5z #7/SC ARG 200 O 8g5z #7/SJ LEU 98 CD1 0.104 3.196
8g61 #8/SC ARG 200 C 8g61 #8/SJ LEU 98 CD2 0.104 3.386
8g6j #9/SC ARG 200 O 8g6j #9/SJ LEU 98 CD1 0.103 3.197
mwt_class2_real_space_refined_013.cif #3/SJ ARG 58 NH1 mwt_class2_real_space_refined_013.cif #3/SC TRP 170 CZ2 0.102 3.298
Male_mutant_class2_real_space_refined_009.cif #2/SJ LEU 98 HD12 Male_mutant_class2_real_space_refined_009.cif #2/SC ARG 200 O 0.078 2.402
8g5y #5/SJ ASP 95 OD2 8g5y #5/SC ASN 172 ND2 0.078 2.582
8g60 #6/SJ ARG 54 NH1 8g60 #6/SC GLY 201 CA 0.075 3.445
8g60 #6/SC PRO 199 CG 8g60 #6/SJ ARG 58 CD 0.062 3.698
8g5y #5/SC ILE 174 CD1 8g5y #5/SJ ASP 95 CB 0.059 3.701
8g5y #5/SC ASN 172 ND2 8g5y #5/SJ ASP 95 CG 0.056 3.464
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SJ ASN 95 ND2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SC ILE 174 CD1 0.052 3.468
8g61 #8/SJ THR 62 OG1 8g61 #8/SC TRP 170 CH2 0.051 3.169
8g61 #8/SC ARG 200 CD 8g61 #8/SJ LEU 98 CD2 0.050 3.710
8g5z #7/SC PRO 199 CB 8g5z #7/SJ ARG 58 CD 0.034 3.726
8g6j #9/SC PRO 199 CB 8g6j #9/SJ ARG 58 CD 0.033 3.727
mwt_class2_real_space_refined_013.cif #3/SC ARG 200 O mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH1 0.012 2.648
mwt_class2_real_space_refined_013.cif #3/SC TRP 170 CH2 mwt_class2_real_space_refined_013.cif #3/SJ ARG 58 NH1 0.008 3.392
mwt_class2_real_space_refined_013.cif #3/SJ ARG 58 CD mwt_class2_real_space_refined_013.cif #3/SC PRO 199 CG 0.007 3.753
8g60 #6/SJ ARG 58 NE 8g60 #6/SC PRO 199 CG -0.004 3.524
8g60 #6/SC THR 202 N 8g60 #6/SJ ARG 54 NH2 -0.005 3.285
8g60 #6/SJ LEU 98 CB 8g60 #6/SC ARG 200 O -0.029 3.329
8g5y #5/SC ASN 172 CB 8g5y #5/SJ ASP 95 OD2 -0.034 3.334
8g60 #6/SJ ARG 54 NH2 8g60 #6/SC GLY 201 C -0.044 3.294
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CD Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HH21 -0.046 2.746
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 NH2 Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 CA -0.054 3.379
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 NH2 Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CG -0.055 3.380
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HE Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CG -0.066 2.766
8g5y #5/SJ ARG 54 NH1 8g5y #5/SC ARG 200 O -0.073 2.733
8g5y #5/SC THR 202 N 8g5y #5/SJ ARG 54 NH2 -0.074 3.354
8g61 #8/SJ LEU 98 CD2 8g61 #8/SC GLY 201 CA -0.081 3.841
8g5y #5/SC PRO 199 CG 8g5y #5/SJ ARG 58 CD -0.088 3.848
8g60 #6/SJ ARG 54 NH2 8g60 #6/SC ARG 200 O -0.092 2.752
8g61 #8/SC TRP 170 CH2 8g61 #8/SJ THR 62 CB -0.104 3.744
8g5y #5/SC PRO 199 CB 8g5y #5/SJ LEU 98 CD1 -0.104 3.864
8g60 #6/SC PRO 199 CB 8g60 #6/SJ LEU 98 CD1 -0.106 3.866
8g60 #6/SJ ARG 54 NH1 8g60 #6/SC ARG 200 O -0.109 2.769
mwt_class2_real_space_refined_013.cif #3/SJ ARG 58 CG mwt_class2_real_space_refined_013.cif #3/SC PRO 199 CG -0.117 3.877
Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 HA3 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 NH2 -0.121 2.746
8g5z #7/SC THR 202 OG1 8g5z #7/SJ ARG 58 CD -0.131 3.471
8g6j #9/SC THR 202 OG1 8g6j #9/SJ ARG 58 CD -0.132 3.472
Male_mutant_class2_real_space_refined_009.cif #2/SJ LEU 98 CD1 Male_mutant_class2_real_space_refined_009.cif #2/SC ARG 200 O -0.134 3.314
mwt_class2_real_space_refined_013.cif #3/SC THR 202 N mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH1 -0.134 3.414
8g60 #6/SC THR 202 CA 8g60 #6/SJ ARG 54 NH2 -0.136 3.656
8g60 #6/SC ARG 200 O 8g60 #6/SJ ARG 54 CZ -0.148 3.178
8g6j #9/SJ ARG 54 NH2 8g6j #9/SC GLY 201 O -0.152 2.812
8g5z #7/SJ ARG 54 NH2 8g5z #7/SC GLY 201 O -0.152 2.812
Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 O Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 HH22 -0.153 2.233
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SC TRP 170 CH2 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SJ THR 62 CB -0.155 3.795
8g6j #9/SC TRP 170 CH2 8g6j #9/SJ THR 62 OG1 -0.155 3.375
8g5z #7/SC TRP 170 CH2 8g5z #7/SJ THR 62 OG1 -0.155 3.375
8g5y #5/SJ LEU 98 CB 8g5y #5/SC ARG 200 O -0.165 3.465
Male_mutant_class2_real_space_refined_009.cif #2/SJ ASP 95 OD1 Male_mutant_class2_real_space_refined_009.cif #2/SC ASN 172 ND2 -0.167 2.872
mwt_class2_real_space_refined_013.cif #3/SC ILE 174 CD1 mwt_class2_real_space_refined_013.cif #3/SJ ASN 95 OD1 -0.167 3.467
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 HG3 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HE -0.183 2.183
8g61 #8/SJ ARG 58 CD 8g61 #8/SC ARG 200 O -0.185 3.485
8g5y #5/SJ ARG 54 NH2 8g5y #5/SC GLY 201 C -0.195 3.445
mwt_class2_real_space_refined_013.cif #3/SC THR 202 CB mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH2 -0.195 3.715
8g5y #5/SC THR 202 CA 8g5y #5/SJ ARG 54 NH2 -0.198 3.718
8g5y #5/SJ ASP 95 OD2 8g5y #5/SC ILE 174 CD1 -0.201 3.501
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 NE Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CG -0.206 3.531
8g5z #7/SC ARG 200 CB 8g5z #7/SJ LEU 98 CD1 -0.207 3.967
8g6j #9/SC ARG 200 CB 8g6j #9/SJ LEU 98 CD1 -0.207 3.967
8g5y #5/SC ARG 200 O 8g5y #5/SJ ARG 54 CZ -0.212 3.242
8g61 #8/SC GLY 201 O 8g61 #8/SJ ARG 54 NH2 -0.212 2.872
8g61 #8/SC GLY 201 C 8g61 #8/SJ ARG 54 NH2 -0.225 3.475
mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH2 mwt_class2_real_space_refined_013.cif #3/SC THR 202 N -0.231 3.511
8g5z #7/SC ARG 200 C 8g5z #7/SJ LEU 98 CD1 -0.231 3.721
8g6j #9/SC ARG 200 C 8g6j #9/SJ LEU 98 CD1 -0.232 3.722
8g61 #8/SC ARG 200 O 8g61 #8/SJ ARG 58 CG -0.233 3.533
8g6j #9/SC GLY 201 O 8g6j #9/SJ ARG 54 CZ -0.233 3.263
8g5z #7/SC GLY 201 O 8g5z #7/SJ ARG 54 CZ -0.234 3.264
8g61 #8/SC GLY 201 N 8g61 #8/SJ LEU 98 CD2 -0.236 3.756
8g5y #5/SJ ARG 58 NE 8g5y #5/SC PRO 199 CG -0.237 3.757
8g60 #6/SC ASN 172 CB 8g60 #6/SJ ASP 95 OD2 -0.245 3.545
8g5y #5/SJ ARG 54 NH2 8g5y #5/SC ARG 200 O -0.253 2.913
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 HG2 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HH21 -0.255 2.255
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 CD Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 NH2 -0.259 3.584
8g5z #7/SC GLY 201 C 8g5z #7/SJ ARG 54 NH2 -0.265 3.515
8g6j #9/SC GLY 201 C 8g6j #9/SJ ARG 54 NH2 -0.266 3.516
8g5z #7/SJ ARG 54 NH1 8g5z #7/SC GLY 201 O -0.275 2.935
8g6j #9/SJ ARG 54 NH1 8g6j #9/SC GLY 201 O -0.275 2.935
8g60 #6/SC ARG 200 CB 8g60 #6/SJ LEU 98 CB -0.276 4.036
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 HG3 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 NE -0.280 2.905
8g5z #7/SJ LEU 98 CB 8g5z #7/SC GLY 201 CA -0.287 4.047
8g6j #9/SJ LEU 98 CB 8g6j #9/SC GLY 201 CA -0.288 4.048
8g60 #6/SJ ARG 54 NH2 8g60 #6/SC GLY 201 CA -0.291 3.811
mwt_class2_real_space_refined_013.cif #3/SJ ARG 54 NH1 mwt_class2_real_space_refined_013.cif #3/SC ARG 200 C -0.291 3.541
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 HH22 Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 CA -0.294 2.994
8g5y #5/SC ARG 200 CB 8g5y #5/SJ LEU 98 CB -0.294 4.054
Male_mutant_class2_real_space_refined_009.cif #2/SC ASN 172 HD21 Male_mutant_class2_real_space_refined_009.cif #2/SJ ASP 95 OD1 -0.298 2.378
Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 O Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 NH2 -0.304 3.009
8g60 #6/SC GLY 201 C 8g60 #6/SJ ARG 54 CZ -0.330 3.550
8g61 #8/SC ARG 200 CA 8g61 #8/SJ LEU 98 CD2 -0.330 4.090
8g60 #6/SJ LEU 98 O 8g60 #6/SC GLY 201 CA -0.330 3.630
Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 54 HH21 Male_mutant_class2_real_space_refined_009.cif #2/SC GLY 201 C -0.332 3.032
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SJ THR 62 CB Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SC TRP 170 CZ3 -0.337 3.977
8g60 #6/SC GLY 201 CA 8g60 #6/SJ ARG 54 CZ -0.349 3.839
8g5y #5/SJ LEU 98 O 8g5y #5/SC GLY 201 CA -0.350 3.650
mwt_class2_real_space_refined_013.cif #3/SJ ASN 95 OD1 mwt_class2_real_space_refined_013.cif #3/SC ASN 172 CB -0.356 3.656
Mwt_class3_real_space_refined_003.cif #4/SJ ARG 58 CD Mwt_class3_real_space_refined_003.cif #4/SC ARG 200 O -0.360 3.660
8g5y #5/SC ASN 172 CG 8g5y #5/SJ ASP 95 OD2 -0.364 3.394
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 HD2 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 HH21 -0.365 2.365
8g5y #5/SC GLY 201 C 8g5y #5/SJ ARG 54 CZ -0.374 3.594
8g5y #5/SC GLY 201 CA 8g5y #5/SJ ARG 54 CZ -0.380 3.870
Male_mutant_class2_real_space_refined_009.cif #2/SC PRO 199 HG2 Male_mutant_class2_real_space_refined_009.cif #2/SJ ARG 58 NH2 -0.394 3.019
Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SJ THR 62 OG1 Male_mutant_class45_real_space_refined_013_new.cif-coot-2.pdb #1/SC TRP 170 CZ3 -0.395 3.615
8g5y #5/SC ARG 200 C 8g5y #5/SJ ARG 54 NH1 -0.399 3.649
122 contacts
> style sel stick
Changed 3508 atom styles
> select clear
> hide #!5 models
> hide #!6 models
> hide #!7 models
> hide #!8 models
> hide #!9 models
> hide #!3 models
> hide #!4 models
> show #!4 models
> hide #!2 models
> show #!3 models
> hide #!3 models
> show #!2 models
> select #4/SJ:95
8 atoms, 7 bonds, 1 residue, 1 model selected
> show sel atoms
> show #!3 models
> save
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/comparison/RPS9_RPS2_interaction.cxs
——— End of log from Wed May 6 15:43:28 2026 ———
opened ChimeraX session
> hide #!4 models
> show #!4 models
> hide #!3 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> select #1/LE#2/LE#3/LE#4/LE
8646 atoms, 8778 bonds, 8 pseudobonds, 867 residues, 8 models selected
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> show #!2 models
> show #!3 models
> show sel cartoons
> show sel atoms
> select clear
> hide #!3 models
> hide #!2 models
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> style sel & #!1,4 stick
Changed 727 atom styles
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> select #1-4/mR
1314 atoms, 1454 bonds, 60 residues, 4 models selected
> select clear
> select #1-4/S2
149019 atoms, 164657 bonds, 61 pseudobonds, 6242 residues, 8 models selected
> show #!2 models
> show #!3 models
> show sel cartoons
> select clear
> hide #!2 models
> hide #!3 models
> close session
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/Class_45/Models/Phenix/RealSpaceRefine_15/Male_mutant_class45_real_space_refined_015-coot-0.pdb
Summary of feedback from opening
/yonath_group/disha/RPS9_liver/new_maps_models_p824/male_mutant/new_maps/Class_45/Models/Phenix/RealSpaceRefine_15/Male_mutant_class45_real_space_refined_015-coot-0.pdb
---
warnings | Ignored bad PDB record found on line 95
SSBOND 1 CYS Sb 56 CYS Sb 59
Ignored bad PDB record found on line 96
SSBOND 2 CYS Sg 240 CYS Sg 249
Cannot find LINK/SSBOND residue G (1707 )
Cannot find LINK/SSBOND residue ZN (201 )
Cannot find LINK/SSBOND residue ZN (201 )
Cannot find LINK/SSBOND residue ZN (201 )
Cannot find LINK/SSBOND residue ZN (201 )
24 messages similar to the above omitted
Chain information for Male_mutant_class45_real_space_refined_015-coot-0.pdb #1
---
Chain | Description
At | No description available
B | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lb | No description available
Lc | No description available
Ld | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Ll | No description available
Lm | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
Pt | No description available
S2 | No description available
SA | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SY | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
pp | No description available
> open
> /yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class3_blush/models/New_phenix/RealSpaceRefine_3/Mwt_class3_real_space_refined_003-coot-1.pdb
Summary of feedback from opening
/yonath_group/disha/RPS9_liver/new_maps_models_p824/Male_wildtype/New_maps/class3_blush/models/New_phenix/RealSpaceRefine_3/Mwt_class3_real_space_refined_003-coot-1.pdb
---
warnings | Ignored bad PDB record found on line 807
SSBOND 1 CYS Lj 19 CYS Lj 22
Ignored bad PDB record found on line 808
SSBOND 2 CYS Lj 22 CYS Lj 34
Ignored bad PDB record found on line 809
SSBOND 3 CYS Lj 22 CYS Lj 37
Ignored bad PDB record found on line 810
SSBOND 4 CYS Lj 34 CYS Lj 37
Ignored bad PDB record found on line 811
SSBOND 5 CYS Sa 23 CYS Sa 26
5 messages similar to the above omitted
Start residue of secondary structure not found: HELIX 1 1 ILE A 5 GLY A 13 1 9
Start residue of secondary structure not found: HELIX 2 2 ASP A 33 GLY A 39 1
7
Start residue of secondary structure not found: HELIX 3 3 PRO A 103 PRO A 108
1 6
Start residue of secondary structure not found: HELIX 4 4 LYS A 181 ARG A 193
1 13
Start residue of secondary structure not found: HELIX 5 5 ARG A 200 ASN A 205
1 6
716 messages similar to the above omitted
Cannot find LINK/SSBOND residue ZN (101 )
Cannot find LINK/SSBOND residue ZN (101 )
Cannot find LINK/SSBOND residue ZN (101 )
Cannot find LINK/SSBOND residue ZN (101 )
Cannot find LINK/SSBOND residue ZN (201 )
15 messages similar to the above omitted
Chain information for Mwt_class3_real_space_refined_003-coot-1.pdb #2
---
Chain | Description
At Pt | No description available
L5 | No description available
L7 | No description available
L8 | No description available
LA | No description available
LB | No description available
LC | No description available
LD | No description available
LE | No description available
LF | No description available
LG | No description available
LH | No description available
LI | No description available
LJ | No description available
LL | No description available
LM | No description available
LN | No description available
LO | No description available
LP | No description available
LQ | No description available
LR | No description available
LS | No description available
LT | No description available
LU | No description available
LV | No description available
LW | No description available
LX | No description available
LY | No description available
LZ | No description available
La | No description available
Lb | No description available
Lc | No description available
Ld | No description available
Le | No description available
Lf | No description available
Lg | No description available
Lh | No description available
Li | No description available
Lj | No description available
Lk | No description available
Ll | No description available
Lm | No description available
Ln | No description available
Lo | No description available
Lp | No description available
Lr | No description available
S2 | No description available
SA | No description available
SB | No description available
SC | No description available
SD | No description available
SE | No description available
SF | No description available
SG | No description available
SH | No description available
SI | No description available
SJ | No description available
SK | No description available
SL | No description available
SN | No description available
SO | No description available
SP | No description available
SQ | No description available
SR | No description available
SS | No description available
ST | No description available
SU | No description available
SV | No description available
SW | No description available
SX | No description available
SY | No description available
SZ | No description available
Sa | No description available
Sb | No description available
Sc | No description available
Sd | No description available
Se | No description available
Sg | No description available
mR | No description available
> ui tool show Matchmaker
> matchmaker #!2 to #1
Parameters
---
Chain pairing | bb
Alignment algorithm | Needleman-Wunsch
Similarity matrix | BLOSUM-62
SS fraction | 0.3
Gap open (HH/SS/other) | 18/18/6
Gap extend | 1
SS matrix | | | H | S | O
---|---|---|---
H | 6 | -9 | -6
S | | 6 | -6
O | | | 4
Iteration cutoff | 2
Matchmaker Male_mutant_class45_real_space_refined_015-coot-0.pdb, chain L5
(#1) with Mwt_class3_real_space_refined_003-coot-1.pdb, chain L5 (#2),
sequence alignment score = 20963.6
RMSD between 3197 pruned atom pairs is 1.111 angstroms; (across all 3492
pairs: 1.722)
> show cartoons
> hide atoms
> color #1 #5555ffff
> color #2 #55ffffff
> color #2 #ffaaffff
> select clear
> hide cartoons
> select #1-2/SJ,SC,Se, SD
10389 atoms, 10571 bonds, 1350 residues, 2 models selected
> select #1-2/SJ,SC,Se, SD,mR
11379 atoms, 11678 bonds, 1398 residues, 2 models selected
> show sel cartoons
> select clear
> select #1-2/SJ,SC,Se, SD,mR
11379 atoms, 11678 bonds, 1398 residues, 2 models selected
> show sel surfaces
> select clear
> hide #!1 models
> select #1/mR#2/mR
990 atoms, 1107 bonds, 48 residues, 2 models selected
> color (#!2 & sel) red
> select clear
> show #!1 models
> hide #!2 models
> select #1/mR
624 atoms, 698 bonds, 30 residues, 1 model selected
> color (#!1 & sel) orange
> select clear
> show #!2 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> show #!1 models
> hide #!2 models
> show #!2 models
> hide #!1 models
> hide #!2 models
> show #!2 models
> show #!1 models
> hide surfaces
Drag select of 238 residues
> ui tool show Contacts
>