Changes between Initial Version and Version 1 of Ticket #16632


Ignore:
Timestamp:
Jan 16, 2025, 3:38:09 PM (10 months ago)
Author:
Eric Pettersen
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #16632

    • Property Component Unassigned → Structure Editing
    • Property Owner set to Eric Pettersen
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → accepted
    • Property Summary ChimeraX bug report submission → All hydrogen names for ATP N6

  • Ticket #16632 – Description

    initial v1  
    34613461 
    34623462
    3463 > mmaker #17/E to #14/E
    3464 
    3465 Parameters 
    3466 --- 
    3467 Chain pairing | bb 
    3468 Alignment algorithm | Needleman-Wunsch 
    3469 Similarity matrix | BLOSUM-62 
    3470 SS fraction | 0.3 
    3471 Gap open (HH/SS/other) | 18/18/6 
    3472 Gap extend | 1 
    3473 SS matrix |  |  | H | S | O 
    3474 ---|---|---|--- 
    3475 H | 6 | -9 | -6 
    3476 S |  | 6 | -6 
    3477 O |  |  | 4 
    3478 Iteration cutoff | 2 
    3479  
    3480 Matchmaker copy of 8bq2 (1).pdb, chain E (#14) with 8bq2 (1).pdb, chain E
    3481 (#17), sequence alignment score = 1691.7 
    3482 RMSD between 310 pruned atom pairs is 0.000 angstroms; (across all 310 pairs:
    3483 0.000) 
    3484  
    3485 
    3486 > hide #!17 models
    3487 
    3488 > select #16/D:126
    3489 
    3490 9 atoms, 8 bonds, 1 residue, 1 model selected 
    3491 
    3492 > select up
    3493 
    3494 48 atoms, 47 bonds, 6 residues, 1 model selected 
    3495 
    3496 > select up
    3497 
    3498 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    3499 
    3500 > color sel #ae839bff
    3501 
    3502 > select up
    3503 
    3504 2016 atoms, 2044 bonds, 261 residues, 1 model selected 
    3505 
    3506 > select up
    3507 
    3508 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    3509 
    3510 > color sel #ae839bff
    3511 
    3512 > select clear
    3513 
    3514 > dssp
    3515 
    3516 Drag select of 261 residues 
    3517 
    3518 > select clear
    3519 
    3520 Drag select of 156 residues 
    3521 
    3522 > select clear
    3523 
    3524 [Repeated 2 time(s)]Drag select of 199 residues 
    3525 Drag select of 20 residues 
    3526 
    3527 > select clear
    3528 
    3529 > select #16/A:141
    3530 
    3531 11 atoms, 11 bonds, 1 residue, 1 model selected 
    3532 
    3533 > select clear
    3534 
    3535 > select #16/X:155
    3536 
    3537 8 atoms, 7 bonds, 1 residue, 1 model selected 
    3538 
    3539 > select clear
    3540 
    3541 [Repeated 1 time(s)]
    3542 
    3543 > dssp
    3544 
    3545 > select clear
    3546 
    3547 [Repeated 1 time(s)]Drag select of 33 residues 
    3548 
    3549 > select clear
    3550 
    3551 > dssp
    3552 
    3553 > select clear
    3554 
    3555 > select #16/Z:283
    3556 
    3557 7 atoms, 6 bonds, 1 residue, 1 model selected 
    3558 
    3559 > hide #!16 models
    3560 
    3561 > hide #!14 models
    3562 
    3563 > show #!7 models
    3564 
    3565 > hide #!7 models
    3566 
    3567 > show #!4 models
    3568 
    3569 > hide #!4 models
    3570 
    3571 > show #!4 models
    3572 
    3573 > hide #!4 models
    3574 
    3575 > show #!16 models
    3576 
    3577 > show #!17 models
    3578 
    3579 Drag select of 98 residues 
    3580 
    3581 > select up
    3582 
    3583 1010 atoms, 1019 bonds, 126 residues, 1 model selected 
    3584 
    3585 > select up
    3586 
    3587 3503 atoms, 3558 bonds, 445 residues, 1 model selected 
    3588 
    3589 > select up
    3590 
    3591 3577 atoms, 3634 bonds, 455 residues, 1 model selected 
    3592 
    3593 > select up
    3594 
    3595 3928 atoms, 3991 bonds, 500 residues, 1 model selected 
    3596 
    3597 > select up
    3598 
    3599 30113 atoms, 30698 bonds, 3769 residues, 1 model selected 
    3600 
    3601 > select down
    3602 
    3603 3928 atoms, 3991 bonds, 500 residues, 1 model selected 
    3604 
    3605 > delete atoms sel
    3606 
    3607 > delete bonds sel
    3608 
    3609 > hide #!17 models
    3610 
    3611 > hide #!16 models
    3612 
    3613 > show #!16 models
    3614 
    3615 > hide #!16 models
    3616 
    3617 > show #!16 models
    3618 
    3619 > hide #!16 models
    3620 
    3621 > show #!16 models
    3622 
    3623 > hide #!15 models
    3624 
    3625 > show #!15 models
    3626 
    3627 > hide #!15 models
    3628 
    3629 > show #!15 models
    3630 
    3631 > hide #!16 models
    3632 
    3633 > show #!16 models
    3634 
    3635 > select clear
    3636 
    3637 > select #16/Y:219
    3638 
    3639 7 atoms, 6 bonds, 1 residue, 1 model selected 
    3640 
    3641 > select up
    3642 
    3643 124 atoms, 124 bonds, 15 residues, 1 model selected 
    3644 
    3645 > select up
    3646 
    3647 1868 atoms, 1901 bonds, 239 residues, 1 model selected 
    3648 
    3649 > delete atoms sel
    3650 
    3651 > delete bonds sel
    3652 
    3653 Drag select of 199 residues 
    3654 
    3655 > select up
    3656 
    3657 2184 atoms, 2208 bonds, 278 residues, 1 model selected 
    3658 
    3659 > select up
    3660 
    3661 3950 atoms, 4014 bonds, 503 residues, 1 model selected 
    3662 
    3663 > select up
    3664 
    3665 24317 atoms, 24802 bonds, 3030 residues, 1 model selected 
    3666 
    3667 > select down
    3668 
    3669 3950 atoms, 4014 bonds, 503 residues, 1 model selected 
    3670 
    3671 > delete atoms sel
    3672 
    3673 > delete bonds sel
    3674 
    3675 Drag select of 85 residues 
    3676 
    3677 > select up
    3678 
    3679 1400 atoms, 1408 bonds, 183 residues, 2 models selected 
    3680 
    3681 > select up
    3682 
    3683 7976 atoms, 8092 bonds, 1028 residues, 2 models selected 
    3684 
    3685 > hide #!16 models
    3686 
    3687 > show #!16 models
    3688 
    3689 > select clear
    3690 
    3691 Drag select of 166 residues 
    3692 
    3693 > select up
    3694 
    3695 1811 atoms, 1829 bonds, 232 residues, 1 model selected 
    3696 
    3697 > select up
    3698 
    3699 4399 atoms, 4467 bonds, 565 residues, 1 model selected 
    3700 
    3701 > delete atoms sel
    3702 
    3703 > delete bonds sel
    3704 
    3705 > show #!17 models
    3706 
    3707 > hide #!17 models
    3708 
    3709 > hide #!15 models
    3710 
    3711 > show #!15 models
    3712 
    3713 > hide #!16 models
    3714 
    3715 > show #!16 models
    3716 
    3717 Drag select of 356 residues 
    3718 
    3719 > select up
    3720 
    3721 3480 atoms, 3518 bonds, 442 residues, 1 model selected 
    3722 
    3723 > select up
    3724 
    3725 5919 atoms, 6015 bonds, 753 residues, 1 model selected 
    3726 
    3727 > delete atoms sel
    3728 
    3729 > delete bonds sel
    3730 
    3731 Drag select of 124 residues, 1 pseudobonds 
    3732 
    3733 > select up
    3734 
    3735 1394 atoms, 1402 bonds, 1 pseudobond, 181 residues, 2 models selected 
    3736 
    3737 > select up
    3738 
    3739 3925 atoms, 3989 bonds, 1 pseudobond, 499 residues, 2 models selected 
    3740 
    3741 > delete atoms (#!16 & sel)
    3742 
    3743 > delete bonds (#!16 & sel)
    3744 
    3745 Drag select of 7 residues 
    3746 [Repeated 1 time(s)]Drag select of 10 residues 
    3747 
    3748 > delete atoms sel
    3749 
    3750 > delete bonds sel
    3751 
    3752 Drag select of 11 residues 
    3753 
    3754 > select up
    3755 
    3756 567 atoms, 647 bonds, 27 residues, 1 model selected 
    3757 
    3758 > select clear
    3759 
    3760 Drag select of 6 residues 
    3761 
    3762 > select clear
    3763 
    3764 Drag select of 9 residues 
    3765 
    3766 > delete atoms sel
    3767 
    3768 > delete bonds sel
    3769 
    3770 Drag select of 7 residues 
    3771 
    3772 > delete atoms sel
    3773 
    3774 > delete bonds sel
    3775 
    3776 Drag select of 3 residues 
    3777 [Repeated 1 time(s)]
    3778 
    3779 > select clear
    3780 
    3781 Drag select of 3 residues 
    3782 
    3783 > delete atoms sel
    3784 
    3785 > delete bonds sel
    3786 
    3787 > select #16/D:112
    3788 
    3789 9 atoms, 8 bonds, 1 residue, 1 model selected 
    3790 
    3791 > select up
    3792 
    3793 44 atoms, 43 bonds, 5 residues, 1 model selected 
    3794 
    3795 > select up
    3796 
    3797 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    3798 
    3799 > color sel #533744ff
    3800 
    3801 > select clear
    3802 
    3803 > select #16/D:328
    3804 
    3805 7 atoms, 6 bonds, 1 residue, 1 model selected 
    3806 
    3807 > select #16/D:343
    3808 
    3809 7 atoms, 6 bonds, 1 residue, 1 model selected 
    3810 
    3811 > select up
    3812 
    3813 32 atoms, 32 bonds, 4 residues, 1 model selected 
    3814 
    3815 > select up
    3816 
    3817 425 atoms, 433 bonds, 55 residues, 1 model selected 
    3818 
    3819 > select up
    3820 
    3821 456 atoms, 464 bonds, 59 residues, 1 model selected 
    3822 
    3823 > select up
    3824 
    3825 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    3826 
    3827 > color sel #533744ff
    3828 
    3829 [Repeated 1 time(s)]
    3830 
    3831 > select #15/C:111
    3832 
    3833 11 atoms, 10 bonds, 1 residue, 1 model selected 
    3834 
    3835 > select up
    3836 
    3837 35 atoms, 34 bonds, 4 residues, 1 model selected 
    3838 
    3839 > select up
    3840 
    3841 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    3842 
    3843 > select up
    3844 
    3845 2016 atoms, 2044 bonds, 261 residues, 1 model selected 
    3846 
    3847 > select up
    3848 
    3849 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    3850 
    3851 > color sel #ae839bff
    3852 
    3853 [Repeated 5 time(s)]
    3854 
    3855 > hide #!15 models
    3856 
    3857 > show #!15 models
    3858 
    3859 > hide #!15 models
    3860 
    3861 > show #!15 models
    3862 
    3863 > hide #!15 models
    3864 
    3865 > hide #!16 models
    3866 
    3867 > show #!16 models
    3868 
    3869 > select add #17
    3870 
    3871 24757 atoms, 25188 bonds, 59 pseudobonds, 3161 residues, 4 models selected 
    3872 
    3873 > select add #16
    3874 
    3875 30272 atoms, 30800 bonds, 63 pseudobonds, 3842 residues, 6 models selected 
    3876 
    3877 > select subtract #17
    3878 
    3879 7941 atoms, 8074 bonds, 4 pseudobonds, 995 residues, 3 models selected 
    3880 
    3881 > select add #15
    3882 
    3883 8099 atoms, 8250 bonds, 5 pseudobonds, 1003 residues, 4 models selected 
    3884 
    3885 > select subtract #15
    3886 
    3887 5515 atoms, 5612 bonds, 4 pseudobonds, 681 residues, 2 models selected 
    3888 
    3889 > select subtract #16
    3890 
    3891 Nothing selected 
    3892 
    3893 > select #16/C:90
    3894 
    3895 9 atoms, 8 bonds, 1 residue, 1 model selected 
    3896 
    3897 > select up
    3898 
    3899 100 atoms, 99 bonds, 14 residues, 1 model selected 
    3900 
    3901 > select up
    3902 
    3903 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    3904 
    3905 > color sel #ae839bff
    3906 
    3907 > select #16/C:341
    3908 
    3909 9 atoms, 8 bonds, 1 residue, 1 model selected 
    3910 
    3911 > select up
    3912 
    3913 32 atoms, 32 bonds, 4 residues, 1 model selected 
    3914 
    3915 > select #16/C:123
    3916 
    3917 6 atoms, 5 bonds, 1 residue, 1 model selected 
    3918 
    3919 > select #16/C:342
    3920 
    3921 5 atoms, 4 bonds, 1 residue, 1 model selected 
    3922 
    3923 > select up
    3924 
    3925 32 atoms, 32 bonds, 4 residues, 1 model selected 
    3926 
    3927 > select up
    3928 
    3929 425 atoms, 433 bonds, 55 residues, 1 model selected 
    3930 
    3931 > select up
    3932 
    3933 456 atoms, 464 bonds, 59 residues, 1 model selected 
    3934 
    3935 > select up
    3936 
    3937 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    3938 
    3939 > color sel #ae839bff
    3940 
    3941 > select clear
    3942 
    3943 > select #16/W:17
    3944 
    3945 21 atoms, 23 bonds, 1 residue, 1 model selected 
    3946 
    3947 > select up
    3948 
    3949 168 atoms, 191 bonds, 8 residues, 1 model selected 
    3950 
    3951 > select up
    3952 
    3953 5515 atoms, 5612 bonds, 681 residues, 1 model selected 
    3954 
    3955 > select down
    3956 
    3957 168 atoms, 191 bonds, 8 residues, 1 model selected 
    3958 
    3959 > color sel #ffbc6cff
    3960 
    3961 > select add #16
    3962 
    3963 5515 atoms, 5612 bonds, 4 pseudobonds, 681 residues, 2 models selected 
    3964 
    3965 > select ::name="ATP"::name="CA"
    3966 
    3967 1517 atoms, 1518 bonds, 23 pseudobonds, 137 residues, 12 models selected 
    3968 
    3969 > show sel & #!16 atoms
    3970 
    3971 > select clear
    3972 
    3973 Drag select of 99 atoms, 99 bonds 
    3974 
    3975 > delete atoms sel
    3976 
    3977 > delete bonds sel
    3978 
    3979 Drag select of 165 atoms, 165 bonds 
    3980 
    3981 > delete atoms sel
    3982 
    3983 > delete bonds sel
    3984 
    3985 Drag select of 99 atoms, 99 bonds 
    3986 
    3987 > delete atoms sel
    3988 
    3989 > delete bonds sel
    3990 
    3991 Drag select of 33 atoms, 33 bonds 
    3992 [Repeated 1 time(s)]
    3993 
    3994 > delete atoms sel
    3995 
    3996 > delete bonds sel
    3997 
    3998 > select clear
    3999 
    4000 > select #16/W:17
    4001 
    4002 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4003 
    4004 > select up
    4005 
    4006 168 atoms, 191 bonds, 8 residues, 1 model selected 
    4007 
    4008 > show sel atoms
    4009 
    4010 > style sel stick
    4011 
    4012 Changed 168 atom styles 
    4013 
    4014 > select clear
    4015 
    4016 > show #!17 models
    4017 
    4018 Drag select of 247 residues 
    4019 
    4020 > select up
    4021 
    4022 2638 atoms, 2666 bonds, 347 residues, 1 model selected 
    4023 
    4024 > select up
    4025 
    4026 3894 atoms, 3948 bonds, 506 residues, 1 model selected 
    4027 
    4028 > select up
    4029 
    4030 3908 atoms, 3962 bonds, 508 residues, 1 model selected 
    4031 
    4032 > select up
    4033 
    4034 4752 atoms, 4820 bonds, 620 residues, 1 model selected 
    4035 
    4036 > delete atoms sel
    4037 
    4038 > delete bonds sel
    4039 
    4040 Drag select of 530 residues 
    4041 
    4042 > select up
    4043 
    4044 4815 atoms, 4870 bonds, 626 residues, 1 model selected 
    4045 
    4046 > select up
    4047 
    4048 8646 atoms, 8768 bonds, 1126 residues, 1 model selected 
    4049 
    4050 > select up
    4051 
    4052 8660 atoms, 8782 bonds, 1128 residues, 1 model selected 
    4053 
    4054 > select up
    4055 
    4056 9504 atoms, 9640 bonds, 1240 residues, 1 model selected 
    4057 
    4058 > select up
    4059 
    4060 9635 atoms, 9772 bonds, 1251 residues, 1 model selected 
    4061 
    4062 > delete atoms sel
    4063 
    4064 > delete bonds sel
    4065 
    4066 Drag select of 66 residues 
    4067 
    4068 > select up
    4069 
    4070 710 atoms, 713 bonds, 91 residues, 1 model selected 
    4071 
    4072 > select up
    4073 
    4074 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    4075 
    4076 > select up
    4077 
    4078 2409 atoms, 2443 bonds, 313 residues, 1 model selected 
    4079 
    4080 > delete atoms sel
    4081 
    4082 > delete bonds sel
    4083 
    4084 Drag select of 8 residues 
    4085 
    4086 > delete atoms sel
    4087 
    4088 > delete bonds sel
    4089 
    4090 Drag select of 9 residues 
    4091 
    4092 > delete atoms sel
    4093 
    4094 > delete bonds sel
    4095 
    4096 Drag select of 4 residues 
    4097 
    4098 > delete atoms sel
    4099 
    4100 > delete bonds sel
    4101 
    4102 > select #17/W:22
    4103 
    4104 22 atoms, 24 bonds, 1 residue, 1 model selected 
    4105 
    4106 > delete atoms sel
    4107 
    4108 > delete bonds sel
    4109 
    4110 > hide #!16 models
    4111 
    4112 > select add #17
    4113 
    4114 5058 atoms, 5148 bonds, 17 pseudobonds, 641 residues, 3 models selected 
    4115 
    4116 > select ::name="ATP"::name="CA"
    4117 
    4118 957 atoms, 957 bonds, 12 pseudobonds, 87 residues, 12 models selected 
    4119 
    4120 > show sel & #!17 atoms
    4121 
    4122 > style sel & #!17 stick
    4123 
    4124 Changed 133 atom styles 
    4125 
    4126 > select clear
    4127 
    4128 Drag select of 67 atoms, 4 pseudobonds, 66 bonds 
    4129 
    4130 > delete atoms (#!17 & sel)
    4131 
    4132 > delete bonds (#!17 & sel)
    4133 
    4134 > show #!16 models
    4135 
    4136 > select #17/D:285
    4137 
    4138 9 atoms, 8 bonds, 1 residue, 1 model selected 
    4139 
    4140 > select up
    4141 
    4142 25 atoms, 25 bonds, 3 residues, 1 model selected 
    4143 
    4144 > select up
    4145 
    4146 2 atoms, 1 bond, 1 residue, 1 model selected 
    4147 
    4148 > select up
    4149 
    4150 31 atoms, 33 bonds, 1 residue, 1 model selected 
    4151 
    4152 > select up
    4153 
    4154 32 atoms, 33 bonds, 2 residues, 1 model selected 
    4155 
    4156 > select up
    4157 
    4158 5119 atoms, 5216 bonds, 645 residues, 1 model selected 
    4159 
    4160 > select down
    4161 
    4162 32 atoms, 33 bonds, 2 residues, 1 model selected 
    4163 
    4164 > delete atoms sel
    4165 
    4166 > delete bonds sel
    4167 
    4168 > select #16/M:402@CA
    4169 
    4170 1 atom, 1 residue, 1 model selected 
    4171 
    4172 > select #16/M:402@CA
    4173 
    4174 1 atom, 1 residue, 1 model selected 
    4175 
    4176 > delete atoms sel
    4177 
    4178 > delete bonds sel
    4179 
    4180 > select #17/E:402@CA
    4181 
    4182 1 atom, 1 residue, 1 model selected 
    4183 
    4184 > delete atoms sel
    4185 
    4186 > delete bonds sel
    4187 
    4188 > hide #!16 models
    4189 
    4190 > select add #17
    4191 
    4192 4990 atoms, 5082 bonds, 10 pseudobonds, 633 residues, 3 models selected 
    4193 
    4194 > color (#!17 & sel) #ffbc6cff
    4195 
    4196 > color (#!17 & sel) #b2b2b2ff
    4197 
    4198 > show #!16 models
    4199 
    4200 > select clear
    4201 
    4202 > select #17/W:14
    4203 
    4204 22 atoms, 24 bonds, 1 residue, 1 model selected 
    4205 
    4206 > select up
    4207 
    4208 173 atoms, 196 bonds, 8 residues, 1 model selected 
    4209 
    4210 > show sel atoms
    4211 
    4212 > style sel stick
    4213 
    4214 Changed 173 atom styles 
    4215 
    4216 > mmaker #16/C to #17/E
    4217 
    4218 Parameters 
    4219 --- 
    4220 Chain pairing | bb 
    4221 Alignment algorithm | Needleman-Wunsch 
    4222 Similarity matrix | BLOSUM-62 
    4223 SS fraction | 0.3 
    4224 Gap open (HH/SS/other) | 18/18/6 
    4225 Gap extend | 1 
    4226 SS matrix |  |  | H | S | O 
    4227 ---|---|---|--- 
    4228 H | 6 | -9 | -6 
    4229 S |  | 6 | -6 
    4230 O |  |  | 4 
    4231 Iteration cutoff | 2 
    4232  
    4233 Matchmaker 8bq2 (1).pdb, chain E (#17) with
    4234 161224_optimisation_model_radAWT_ATP_real_space_refined_008.pdb, chain C
    4235 (#16), sequence alignment score = 838.2 
    4236 RMSD between 235 pruned atom pairs is 0.861 angstroms; (across all 305 pairs:
    4237 3.026) 
    4238  
    4239 
    4240 > view fig1
    4241 
    4242 Drag select of 46 residues 
    4243 
    4244 > select clear
    4245 
    4246 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/fig1_B.tif"
    4247 > width 2000 height 1158 supersample 4 transparentBackground true
    4248 
    4249 > view name fig2
    4250 
    4251 > hide #!16 models
    4252 
    4253 > show #!16 models
    4254 
    4255 > hide #!16 models
    4256 
    4257 > hide #!17 models
    4258 
    4259 > show #!14 models
    4260 
    4261 > hide #!14 models
    4262 
    4263 > show #!15 models
    4264 
    4265 > hide #!15 models
    4266 
    4267 > show #!14 models
    4268 
    4269 > hide #!14 models
    4270 
    4271 > show #!13 models
    4272 
    4273 > hide #!13 models
    4274 
    4275 > show #!12 models
    4276 
    4277 > hide #!12 models
    4278 
    4279 > show #11 models
    4280 
    4281 > hide #11 models
    4282 
    4283 > show #!15 models
    4284 
    4285 > show #!14 models
    4286 
    4287 > select ::name="ATP"::name="CA"
    4288 
    4289 856 atoms, 858 bonds, 8 pseudobonds, 76 residues, 12 models selected 
    4290 
    4291 > show sel & #!14-15 atoms
    4292 
    4293 > select #15/W:17
    4294 
    4295 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4296 
    4297 > select up
    4298 
    4299 126 atoms, 143 bonds, 6 residues, 1 model selected 
    4300 
    4301 > select #14/W:14
    4302 
    4303 22 atoms, 24 bonds, 1 residue, 1 model selected 
    4304 
    4305 > select up
    4306 
    4307 130 atoms, 147 bonds, 6 residues, 1 model selected 
    4308 
    4309 > select up
    4310 
    4311 2539 atoms, 2590 bonds, 319 residues, 1 model selected 
    4312 
    4313 > select up
    4314 
    4315 52251 atoms, 53361 bonds, 6515 residues, 24 models selected 
    4316 
    4317 > select #15/W:17
    4318 
    4319 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4320 
    4321 > select up
    4322 
    4323 126 atoms, 143 bonds, 6 residues, 1 model selected 
    4324 
    4325 > select up
    4326 
    4327 2584 atoms, 2638 bonds, 322 residues, 1 model selected 
    4328 
    4329 > select down
    4330 
    4331 126 atoms, 143 bonds, 6 residues, 1 model selected 
    4332 
    4333 > show sel atoms
    4334 
    4335 > select #14/W:14
    4336 
    4337 22 atoms, 24 bonds, 1 residue, 1 model selected 
    4338 
    4339 > select up
    4340 
    4341 130 atoms, 147 bonds, 6 residues, 1 model selected 
    4342 
    4343 > show sel atoms
    4344 
    4345 > hide sel cartoons
    4346 
    4347 > hide sel atoms
    4348 
    4349 > show sel atoms
    4350 
    4351 > hide sel atoms
    4352 
    4353 > show sel cartoons
    4354 
    4355 > select clear
    4356 
    4357 > select #15/W:17
    4358 
    4359 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4360 
    4361 > select up
    4362 
    4363 126 atoms, 143 bonds, 6 residues, 1 model selected 
    4364 
    4365 > hide sel cartoons
    4366 
    4367 [Repeated 1 time(s)]
    4368 
    4369 > show sel cartoons
    4370 
    4371 > hide sel atoms
    4372 
    4373 > hide #!14 models
    4374 
    4375 > select clear
    4376 
    4377 > select #15/C:128
    4378 
    4379 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4380 
    4381 > select add #15
    4382 
    4383 2584 atoms, 2638 bonds, 1 pseudobond, 322 residues, 2 models selected 
    4384 
    4385 > hide #!15 models
    4386 
    4387 > select subtract #15
    4388 
    4389 Nothing selected 
    4390 
    4391 > show #!16 models
    4392 
    4393 > combine #16
    4394 
    4395 > rename #18 "Monomere RadAWT"
    4396 
    4397 > select #16/D:319
    4398 
    4399 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4400 
    4401 > select up
    4402 
    4403 51 atoms, 51 bonds, 6 residues, 1 model selected 
    4404 
    4405 > select up
    4406 
    4407 425 atoms, 433 bonds, 55 residues, 1 model selected 
    4408 
    4409 > select up
    4410 
    4411 456 atoms, 464 bonds, 59 residues, 1 model selected 
    4412 
    4413 > select up
    4414 
    4415 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    4416 
    4417 > select down
    4418 
    4419 456 atoms, 464 bonds, 59 residues, 1 model selected 
    4420 
    4421 > delete atoms sel
    4422 
    4423 > delete bonds sel
    4424 
    4425 > undo
    4426 
    4427 Undo failed, probably because structures have been modified. 
    4428 
    4429 > hide #!16 models
    4430 
    4431 > show #!16 models
    4432 
    4433 > hide #!16 models
    4434 
    4435 > show #!16 models
    4436 
    4437 > hide #!16 models
    4438 
    4439 > show #!16 models
    4440 
    4441 > hide #!18 models
    4442 
    4443 > show #!18 models
    4444 
    4445 > hide #!16 models
    4446 
    4447 > hide #!18 models
    4448 
    4449 > show #!18 models
    4450 
    4451 > show #!16 models
    4452 
    4453 > hide #!16 models
    4454 
    4455 > show #!16 models
    4456 
    4457 > hide #!18 models
    4458 
    4459 > show #!18 models
    4460 
    4461 > hide #!18 models
    4462 
    4463 > show #!18 models
    4464 
    4465 > hide #!18 models
    4466 
    4467 > show #!18 models
    4468 
    4469 > hide #!16 models
    4470 
    4471 > show #!16 models
    4472 
    4473 > hide #!16 models
    4474 
    4475 > show #!16 models
    4476 
    4477 > hide #!18 models
    4478 
    4479 > select #16/D:151
    4480 
    4481 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4482 
    4483 > select up
    4484 
    4485 90 atoms, 90 bonds, 12 residues, 1 model selected 
    4486 
    4487 > select up
    4488 
    4489 1970 atoms, 1997 bonds, 255 residues, 1 model selected 
    4490 
    4491 > delete atoms sel
    4492 
    4493 > delete bonds sel
    4494 
    4495 Drag select of 33 atoms, 33 bonds 
    4496 
    4497 > delete atoms sel
    4498 
    4499 > delete bonds sel
    4500 
    4501 > select #16/W:18
    4502 
    4503 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4504 
    4505 > select up
    4506 
    4507 168 atoms, 191 bonds, 8 residues, 1 model selected 
    4508 
    4509 > hide sel atoms
    4510 
    4511 > save "/Users/mimbert/OneDrive - Institut Pasteur
    4512 > Paris/Papers/chimeraX_fig1.cxs"
    4513 
    4514 ——— End of log from Thu Dec 19 16:49:36 2024 ———
    4515 
    4516 opened ChimeraX session 
    4517 
    4518 > ui mousemode right select
    4519 
    4520 > select clear
    4521 
    4522 > hide #!16 models
    4523 
    4524 > show #!18 models
    4525 
    4526 > hide #!18 models
    4527 
    4528 > show #!16 models
    4529 
    4530 > hide #!16 models
    4531 
    4532 > show #!15 models
    4533 
    4534 > hide #!15 models
    4535 
    4536 > show #!15 models
    4537 
    4538 > hide #!15 models
    4539 
    4540 > show #!16 models
    4541 
    4542 > hide #!16 models
    4543 
    4544 > show #!17 models
    4545 
    4546 > hide #!17 models
    4547 
    4548 > show #!18 models
    4549 
    4550 > hide #!18 models
    4551 
    4552 > show #!14 models
    4553 
    4554 > hide #!14 models
    4555 
    4556 > show #!14 models
    4557 
    4558 > show #!15 models
    4559 
    4560 > hide #!15 models
    4561 
    4562 > hide #!14 models
    4563 
    4564 > show #!16 models
    4565 
    4566 > show #!17 models
    4567 
    4568 > hide #!17 models
    4569 
    4570 > show #!17 models
    4571 
    4572 > show #!15 models
    4573 
    4574 > hide #!16 models
    4575 
    4576 > hide #!17 models
    4577 
    4578 > hide #!15 models
    4579 
    4580 > show #!16 models
    4581 
    4582 > select #15/C:37-38
    4583 
    4584 17 atoms, 16 bonds, 2 residues, 1 model selected 
    4585 
    4586 > select #15/C:37-48
    4587 
    4588 90 atoms, 90 bonds, 12 residues, 1 model selected 
    4589 
    4590 > select add #15
    4591 
    4592 2584 atoms, 2638 bonds, 1 pseudobond, 322 residues, 2 models selected 
    4593 
    4594 > select subtract #15
    4595 
    4596 Nothing selected 
    4597 
    4598 > select add #16
    4599 
    4600 2627 atoms, 2687 bonds, 2 pseudobonds, 325 residues, 2 models selected 
    4601 Alignment identifier is 16/C 
    4602 Alignment identifier is 16/W 
    4603 
    4604 > select subtract #16
    4605 
    4606 Nothing selected 
    4607 
    4608 > select #16/C:333
    4609 
    4610 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4611 
    4612 > select #16/C:333
    4613 
    4614 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4615 
    4616 > show sel atoms
    4617 
    4618 > style sel stick
    4619 
    4620 Changed 8 atom styles 
    4621 
    4622 > show #!15 models
    4623 
    4624 > hide #!15 models
    4625 
    4626 > show #!15 models
    4627 
    4628 > select add #16
    4629 
    4630 2627 atoms, 2687 bonds, 2 pseudobonds, 325 residues, 2 models selected 
    4631 
    4632 > select subtract #16
    4633 
    4634 Nothing selected 
    4635 
    4636 > hide #!16 models
    4637 
    4638 > select add #15
    4639 
    4640 2584 atoms, 2638 bonds, 1 pseudobond, 322 residues, 2 models selected 
    4641 Alignment identifier is 15/C 
    4642 Alignment identifier is 15/W 
    4643 
    4644 > select subtract #15
    4645 
    4646 Nothing selected 
    4647 
    4648 > select #15/C:333
    4649 
    4650 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4651 
    4652 > select #15/C:333
    4653 
    4654 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4655 
    4656 > show sel atoms
    4657 
    4658 > style sel stick
    4659 
    4660 Changed 8 atom styles 
    4661 
    4662 > select #15/C:313
    4663 
    4664 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4665 
    4666 > select #15/C:313
    4667 
    4668 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4669 
    4670 > show sel atoms
    4671 
    4672 > style sel stick
    4673 
    4674 Changed 5 atom styles 
    4675 
    4676 > show #!16 models
    4677 
    4678 > hide #!16 models
    4679 
    4680 > show #!13 models
    4681 
    4682 > hide #!13 models
    4683 
    4684 > show #!13 models
    4685 
    4686 > select add #15
    4687 
    4688 2584 atoms, 2638 bonds, 1 pseudobond, 322 residues, 2 models selected 
    4689 
    4690 > select subtract #15
    4691 
    4692 Nothing selected 
    4693 
    4694 > hide #!15 models
    4695 
    4696 > combine #13
    4697 
    4698 > show #!18 models
    4699 
    4700 > hide #!18 models
    4701 
    4702 > hide #!1 models
    4703 
    4704 > show #!1 models
    4705 
    4706 > hide #!1 models
    4707 
    4708 > show #!1 models
    4709 
    4710 > hide #!13 models
    4711 
    4712 > hide #!1 models
    4713 
    4714 > show #!1 models
    4715 
    4716 > select #1/C:331
    4717 
    4718 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4719 
    4720 > select up
    4721 
    4722 51 atoms, 50 bonds, 6 residues, 1 model selected 
    4723 
    4724 > select up
    4725 
    4726 425 atoms, 433 bonds, 55 residues, 1 model selected 
    4727 
    4728 > select up
    4729 
    4730 456 atoms, 464 bonds, 59 residues, 1 model selected 
    4731 
    4732 > select up
    4733 
    4734 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    4735 
    4736 > color sel #ac849bff
    4737 
    4738 > show #!4 models
    4739 
    4740 > hide #!4 models
    4741 
    4742 > show #!15 models
    4743 
    4744 > hide #!15 models
    4745 
    4746 > select #1/W:17
    4747 
    4748 21 atoms, 23 bonds, 1 residue, 1 model selected 
    4749 
    4750 > select up
    4751 
    4752 126 atoms, 143 bonds, 6 residues, 1 model selected 
    4753 
    4754 > color sel #f5bf79ff
    4755 
    4756 > select clear
    4757 
    4758 > select add #1
    4759 
    4760 2618 atoms, 2672 bonds, 2 pseudobonds, 326 residues, 2 models selected 
    4761 Alignment identifier is 1/C 
    4762 Alignment identifier is 1/W 
    4763 
    4764 > rename #1 RadAWT_ATP_Ca
    4765 
    4766 > select #1/C:333
    4767 
    4768 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4769 
    4770 > select #1/C:333
    4771 
    4772 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4773 
    4774 > show sel atoms
    4775 
    4776 > style sel stick
    4777 
    4778 Changed 8 atom styles 
    4779 
    4780 > select #1/C:313
    4781 
    4782 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4783 
    4784 > select #1/C:313
    4785 
    4786 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4787 
    4788 > show sel atoms
    4789 
    4790 > style sel stick
    4791 
    4792 Changed 5 atom styles 
    4793 
    4794 > select #1/C:311
    4795 
    4796 10 atoms, 10 bonds, 1 residue, 1 model selected 
    4797 
    4798 > select #1/C:311
    4799 
    4800 10 atoms, 10 bonds, 1 residue, 1 model selected 
    4801 
    4802 > show sel atoms
    4803 
    4804 > style sel stick
    4805 
    4806 Changed 10 atom styles 
    4807 
    4808 > select #1/C:310
    4809 
    4810 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4811 
    4812 > select #1/C:310
    4813 
    4814 5 atoms, 4 bonds, 1 residue, 1 model selected 
    4815 
    4816 > show sel atoms
    4817 
    4818 > style sel stick
    4819 
    4820 Changed 5 atom styles 
    4821 
    4822 > select #1/C:180
    4823 
    4824 7 atoms, 6 bonds, 1 residue, 1 model selected 
    4825 
    4826 > select #1/C:180
    4827 
    4828 7 atoms, 6 bonds, 1 residue, 1 model selected 
    4829 
    4830 > show sel atoms
    4831 
    4832 > style sel stick
    4833 
    4834 Changed 7 atom styles 
    4835 
    4836 > style sel stick
    4837 
    4838 Changed 7 atom styles 
    4839 
    4840 > show sel surfaces
    4841 
    4842 [Repeated 1 time(s)]
    4843 
    4844 > hide sel surfaces
    4845 
    4846 > select #1/C:178
    4847 
    4848 9 atoms, 8 bonds, 1 residue, 1 model selected 
    4849 
    4850 > select #1/C:178
    4851 
    4852 9 atoms, 8 bonds, 1 residue, 1 model selected 
    4853 
    4854 > show sel atoms
    4855 
    4856 > style sel stick
    4857 
    4858 Changed 9 atom styles 
    4859 
    4860 > select #1/C:149
    4861 
    4862 7 atoms, 6 bonds, 1 residue, 1 model selected 
    4863 
    4864 > show sel atoms
    4865 
    4866 > style sel stick
    4867 
    4868 Changed 7 atom styles 
    4869 
    4870 > select #1/C:145
    4871 
    4872 4 atoms, 3 bonds, 1 residue, 1 model selected 
    4873 
    4874 > select #1/C:145
    4875 
    4876 4 atoms, 3 bonds, 1 residue, 1 model selected 
    4877 
    4878 > show sel atoms
    4879 
    4880 > style sel stick
    4881 
    4882 Changed 4 atom styles 
    4883 
    4884 > select #1/C:146
    4885 
    4886 6 atoms, 5 bonds, 1 residue, 1 model selected 
    4887 
    4888 > select #1/C:146
    4889 
    4890 6 atoms, 5 bonds, 1 residue, 1 model selected 
    4891 
    4892 > show sel atoms
    4893 
    4894 > style sel stick
    4895 
    4896 Changed 6 atom styles 
    4897 
    4898 > select #1/C:332
    4899 
    4900 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4901 
    4902 > select #1/C:332
    4903 
    4904 8 atoms, 7 bonds, 1 residue, 1 model selected 
    4905 
    4906 > show sel atoms
    4907 
    4908 > style sel stick
    4909 
    4910 Changed 8 atom styles 
    4911 
    4912 > select #1/C:185
    4913 
    4914 11 atoms, 10 bonds, 1 residue, 1 model selected 
    4915 
    4916 > select #1/C:185
    4917 
    4918 11 atoms, 10 bonds, 1 residue, 1 model selected 
    4919 
    4920 > show sel atoms
    4921 
    4922 > style sel stick
    4923 
    4924 Changed 11 atom styles 
    4925 
    4926 > show #!18 models
    4927 
    4928 > hide #!1 models
    4929 
    4930 > show #!1 models
    4931 
    4932 > hide #!1 models
    4933 
    4934 > show #!1 models
    4935 
    4936 > hide #!1 models
    4937 
    4938 > select add #1
    4939 
    4940 2618 atoms, 2672 bonds, 2 pseudobonds, 326 residues, 3 models selected 
    4941 
    4942 > select subtract #1
    4943 
    4944 1 model selected 
    4945 
    4946 > combine #18
    4947 
    4948 > hide #!2 models
    4949 
    4950 > show #!2 models
    4951 
    4952 > hide #!18 models
    4953 
    4954 > select add #2
    4955 
    4956 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    4957 Alignment identifier is 1 
    4958 Alignment identifier is 2/W 
    4959 
    4960 > select #2/C-D:185
    4961 
    4962 22 atoms, 20 bonds, 2 residues, 1 model selected 
    4963 
    4964 > select #2/C-D:185
    4965 
    4966 22 atoms, 20 bonds, 2 residues, 1 model selected 
    4967 
    4968 > show sel atoms
    4969 
    4970 > style sel stick
    4971 
    4972 Changed 22 atom styles 
    4973 
    4974 > select clear
    4975 
    4976 > select #2/C-D:332
    4977 
    4978 16 atoms, 14 bonds, 2 residues, 1 model selected 
    4979 
    4980 > select #2/C-D:332
    4981 
    4982 16 atoms, 14 bonds, 2 residues, 1 model selected 
    4983 
    4984 > show sel atoms
    4985 
    4986 > style sel stick
    4987 
    4988 Changed 16 atom styles 
    4989 
    4990 > select #2/C-D:146
    4991 
    4992 12 atoms, 10 bonds, 2 residues, 1 model selected 
    4993 
    4994 > select #2/C-D:145-146
    4995 
    4996 20 atoms, 18 bonds, 4 residues, 1 model selected 
    4997 
    4998 > show sel atoms
    4999 
    5000 > style sel stick
    5001 
    5002 Changed 20 atom styles 
    5003 
    5004 > select #2/C-D:149
    5005 
    5006 14 atoms, 12 bonds, 2 residues, 1 model selected 
    5007 
    5008 > select #2/C-D:149
    5009 
    5010 14 atoms, 12 bonds, 2 residues, 1 model selected 
    5011 
    5012 > show sel atoms
    5013 
    5014 > style sel stick
    5015 
    5016 Changed 14 atom styles 
    5017 
    5018 > style sel stick
    5019 
    5020 Changed 14 atom styles 
    5021 
    5022 > select #2/C-D:180
    5023 
    5024 14 atoms, 12 bonds, 2 residues, 1 model selected 
    5025 
    5026 > select #2/C-D:180
    5027 
    5028 14 atoms, 12 bonds, 2 residues, 1 model selected 
    5029 
    5030 > show sel atoms
    5031 
    5032 > style sel stick
    5033 
    5034 Changed 14 atom styles 
    5035 
    5036 > select #2/C-D:178
    5037 
    5038 18 atoms, 16 bonds, 2 residues, 1 model selected 
    5039 
    5040 > select #2/C-D:178
    5041 
    5042 18 atoms, 16 bonds, 2 residues, 1 model selected 
    5043 
    5044 > show sel atoms
    5045 
    5046 > style sel stick
    5047 
    5048 Changed 18 atom styles 
    5049 
    5050 > select #2/C-D:334
    5051 
    5052 10 atoms, 8 bonds, 2 residues, 1 model selected 
    5053 
    5054 > select #2/C-D:334
    5055 
    5056 10 atoms, 8 bonds, 2 residues, 1 model selected 
    5057 
    5058 > select
    5059 > #2/C-D:41-43,49-58,63-67,71-78,82-95,104-113,122-128,148-159,163-165,183-193,197-203,212-230,247-251,255-279,309-312
    5060 
    5061 2284 atoms, 2284 bonds, 286 residues, 1 model selected 
    5062 
    5063 > select #2/C-D:314
    5064 
    5065 14 atoms, 12 bonds, 2 residues, 1 model selected 
    5066 
    5067 > select #2/C-D:310
    5068 
    5069 10 atoms, 8 bonds, 2 residues, 1 model selected 
    5070 
    5071 > select #2/C-D:310-311
    5072 
    5073 30 atoms, 30 bonds, 4 residues, 1 model selected 
    5074 
    5075 > show sel atoms
    5076 
    5077 > style sel stick
    5078 
    5079 Changed 30 atom styles 
    5080 
    5081 > select #2/C-D:313
    5082 
    5083 10 atoms, 8 bonds, 2 residues, 1 model selected 
    5084 
    5085 > select #2/C-D:313
    5086 
    5087 10 atoms, 8 bonds, 2 residues, 1 model selected 
    5088 
    5089 > show sel atoms
    5090 
    5091 > style sel stick
    5092 
    5093 Changed 10 atom styles 
    5094 
    5095 > select #2/C-D:333
    5096 
    5097 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5098 
    5099 > select #2/C-D:333
    5100 
    5101 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5102 
    5103 > show sel atoms
    5104 
    5105 > style sel stick
    5106 
    5107 Changed 16 atom styles 
    5108 
    5109 > select #2/C:154
    5110 
    5111 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5112 
    5113 > select up
    5114 
    5115 67 atoms, 67 bonds, 9 residues, 1 model selected 
    5116 
    5117 > select up
    5118 
    5119 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5120 
    5121 > hide sel cartoons
    5122 
    5123 > show sel cartoons
    5124 
    5125 > select up
    5126 
    5127 2016 atoms, 2044 bonds, 261 residues, 1 model selected 
    5128 
    5129 > select up
    5130 
    5131 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    5132 
    5133 > select up
    5134 
    5135 5086 atoms, 5183 bonds, 642 residues, 1 model selected 
    5136 
    5137 > select down
    5138 
    5139 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    5140 
    5141 > select up
    5142 
    5143 5086 atoms, 5183 bonds, 642 residues, 1 model selected 
    5144 
    5145 > select down
    5146 
    5147 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    5148 
    5149 > hide sel cartoons
    5150 
    5151 > show sel cartoons
    5152 
    5153 Drag select of 63 residues 
    5154 
    5155 > select up
    5156 
    5157 490 atoms, 494 bonds, 67 residues, 1 model selected 
    5158 
    5159 > hide sel cartoons
    5160 
    5161 Drag select of 7 residues 
    5162 
    5163 > select up
    5164 
    5165 86 atoms, 86 bonds, 10 residues, 1 model selected 
    5166 
    5167 > select up
    5168 
    5169 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5170 
    5171 > select down
    5172 
    5173 86 atoms, 86 bonds, 10 residues, 1 model selected 
    5174 
    5175 > hide sel cartoons
    5176 
    5177 Drag select of 13 residues 
    5178 
    5179 > select up
    5180 
    5181 394 atoms, 397 bonds, 48 residues, 1 model selected 
    5182 
    5183 > hide sel cartoons
    5184 
    5185 Drag select of 11 atoms, 9 bonds, 36 residues, 1 pseudobonds 
    5186 
    5187 > select up
    5188 
    5189 466 atoms, 469 bonds, 1 pseudobond, 62 residues, 2 models selected 
    5190 
    5191 > select up
    5192 
    5193 2426 atoms, 2462 bonds, 1 pseudobond, 314 residues, 2 models selected 
    5194 
    5195 > select down
    5196 
    5197 466 atoms, 469 bonds, 1 pseudobond, 62 residues, 2 models selected 
    5198 
    5199 > hide sel cartoons
    5200 
    5201 > hide sel atoms
    5202 
    5203 > select #2/C:138
    5204 
    5205 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5206 
    5207 > select up
    5208 
    5209 42 atoms, 42 bonds, 5 residues, 1 model selected 
    5210 
    5211 > select up
    5212 
    5213 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5214 
    5215 > select down
    5216 
    5217 42 atoms, 42 bonds, 5 residues, 1 model selected 
    5218 
    5219 > select #2/C:303
    5220 
    5221 7 atoms, 7 bonds, 1 residue, 1 model selected 
    5222 
    5223 > select up
    5224 
    5225 25 atoms, 25 bonds, 3 residues, 1 model selected 
    5226 
    5227 > select up
    5228 
    5229 425 atoms, 433 bonds, 55 residues, 1 model selected 
    5230 
    5231 > select up
    5232 
    5233 456 atoms, 464 bonds, 59 residues, 1 model selected 
    5234 
    5235 > select up
    5236 
    5237 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    5238 
    5239 > select clear
    5240 
    5241 > select #2/C:302
    5242 
    5243 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5244 
    5245 > select up
    5246 
    5247 25 atoms, 25 bonds, 3 residues, 1 model selected 
    5248 
    5249 > select up
    5250 
    5251 425 atoms, 433 bonds, 55 residues, 1 model selected 
    5252 
    5253 > hide sel cartoons
    5254 
    5255 > select clear
    5256 
    5257 > select #2/C:283
    5258 
    5259 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5260 
    5261 > select up
    5262 
    5263 45 atoms, 45 bonds, 6 residues, 1 model selected 
    5264 
    5265 > select up
    5266 
    5267 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5268 
    5269 > select down
    5270 
    5271 45 atoms, 45 bonds, 6 residues, 1 model selected 
    5272 
    5273 > hide sel cartoons
    5274 
    5275 > select #2/C:137
    5276 
    5277 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5278 
    5279 > select up
    5280 
    5281 42 atoms, 42 bonds, 5 residues, 1 model selected 
    5282 
    5283 > select up
    5284 
    5285 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5286 
    5287 > select down
    5288 
    5289 42 atoms, 42 bonds, 5 residues, 1 model selected 
    5290 
    5291 > hide sel cartoons
    5292 
    5293 > select #2/C:289
    5294 
    5295 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5296 
    5297 > select up
    5298 
    5299 21 atoms, 20 bonds, 3 residues, 1 model selected 
    5300 
    5301 > select up
    5302 
    5303 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5304 
    5305 > select down
    5306 
    5307 21 atoms, 20 bonds, 3 residues, 1 model selected 
    5308 
    5309 > hide sel cartoons
    5310 
    5311 > select #2/C:288
    5312 
    5313 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5314 
    5315 > hide sel cartoons
    5316 
    5317 > select #2/C:239
    5318 
    5319 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5320 
    5321 > select up
    5322 
    5323 47 atoms, 46 bonds, 6 residues, 1 model selected 
    5324 
    5325 > select up
    5326 
    5327 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5328 
    5329 > select down
    5330 
    5331 47 atoms, 46 bonds, 6 residues, 1 model selected 
    5332 
    5333 > hide sel cartoons
    5334 
    5335 > select #2/C:249
    5336 
    5337 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5338 
    5339 > select up
    5340 
    5341 47 atoms, 48 bonds, 5 residues, 1 model selected 
    5342 
    5343 > select up
    5344 
    5345 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5346 
    5347 > select #2/C:252
    5348 
    5349 12 atoms, 12 bonds, 1 residue, 1 model selected 
    5350 
    5351 > select up
    5352 
    5353 24 atoms, 24 bonds, 3 residues, 1 model selected 
    5354 
    5355 > select up
    5356 
    5357 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5358 
    5359 > select down
    5360 
    5361 24 atoms, 24 bonds, 3 residues, 1 model selected 
    5362 
    5363 > hide sel cartoons
    5364 
    5365 > select #2/C:257
    5366 
    5367 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5368 
    5369 > select up
    5370 
    5371 20 atoms, 19 bonds, 3 residues, 1 model selected 
    5372 
    5373 > hide sel cartoons
    5374 
    5375 > select #2/C:249
    5376 
    5377 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5378 
    5379 > select up
    5380 
    5381 47 atoms, 48 bonds, 5 residues, 1 model selected 
    5382 
    5383 > select up
    5384 
    5385 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5386 
    5387 > select down
    5388 
    5389 47 atoms, 48 bonds, 5 residues, 1 model selected 
    5390 
    5391 > hide sel cartoons
    5392 
    5393 > select #2/C:245
    5394 
    5395 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5396 
    5397 > select up
    5398 
    5399 35 atoms, 34 bonds, 5 residues, 1 model selected 
    5400 
    5401 > hide sel cartoons
    5402 
    5403 > select clear
    5404 
    5405 > select #2/C:174
    5406 
    5407 14 atoms, 15 bonds, 1 residue, 1 model selected 
    5408 
    5409 > select up
    5410 
    5411 43 atoms, 44 bonds, 5 residues, 1 model selected 
    5412 
    5413 > hide sel cartoons
    5414 
    5415 > select #2/C:166
    5416 
    5417 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5418 
    5419 > select up
    5420 
    5421 84 atoms, 85 bonds, 12 residues, 1 model selected 
    5422 
    5423 > hide sel cartoons
    5424 
    5425 > select #2/C:200
    5426 
    5427 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5428 
    5429 > select up
    5430 
    5431 34 atoms, 34 bonds, 4 residues, 1 model selected 
    5432 
    5433 > select up
    5434 
    5435 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5436 
    5437 > select down
    5438 
    5439 34 atoms, 34 bonds, 4 residues, 1 model selected 
    5440 Drag select of 1 residues 
    5441 
    5442 > select up
    5443 
    5444 24 atoms, 24 bonds, 3 residues, 1 model selected 
    5445 
    5446 > select up
    5447 
    5448 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    5449 
    5450 > select down
    5451 
    5452 24 atoms, 24 bonds, 3 residues, 1 model selected 
    5453 
    5454 > hide sel cartoons
    5455 
    5456 > select #2/C:202
    5457 
    5458 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5459 
    5460 > select up
    5461 
    5462 34 atoms, 34 bonds, 4 residues, 1 model selected 
    5463 
    5464 > hide sel cartoons
    5465 
    5466 > select #2/C:208
    5467 
    5468 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5469 
    5470 > select up
    5471 
    5472 67 atoms, 68 bonds, 8 residues, 1 model selected 
    5473 
    5474 > hide sel cartoons
    5475 
    5476 > select #2/C:153
    5477 
    5478 10 atoms, 10 bonds, 1 residue, 1 model selected 
    5479 
    5480 > select up
    5481 
    5482 67 atoms, 67 bonds, 9 residues, 1 model selected 
    5483 
    5484 > hide sel cartoons
    5485 
    5486 > select #2/C:190
    5487 
    5488 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5489 
    5490 > select up
    5491 
    5492 69 atoms, 68 bonds, 8 residues, 1 model selected 
    5493 
    5494 > select #2/C:190
    5495 
    5496 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5497 
    5498 > hide sel cartoons
    5499 
    5500 > select #2/C:189
    5501 
    5502 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5503 
    5504 > hide sel cartoons
    5505 
    5506 > select #2/C:191
    5507 
    5508 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5509 
    5510 > select up
    5511 
    5512 69 atoms, 68 bonds, 8 residues, 1 model selected 
    5513 
    5514 > select clear
    5515 
    5516 Drag select of 6 residues 
    5517 
    5518 > hide sel cartoons
    5519 
    5520 > select #2/W:19
    5521 
    5522 21 atoms, 23 bonds, 1 residue, 1 model selected 
    5523 
    5524 > select up
    5525 
    5526 168 atoms, 191 bonds, 8 residues, 1 model selected 
    5527 
    5528 > hide sel cartoons
    5529 
    5530 > hide sel atoms
    5531 
    5532 Drag select of 71 residues 
    5533 
    5534 > hide sel cartoons
    5535 
    5536 Drag select of 58 atoms, 54 bonds, 106 residues, 1 pseudobonds 
    5537 
    5538 > hide sel cartoons
    5539 
    5540 > hide sel atoms
    5541 
    5542 Drag select of 17 residues 
    5543 
    5544 > select up
    5545 
    5546 353 atoms, 358 bonds, 45 residues, 1 model selected 
    5547 
    5548 > hide sel cartoons
    5549 
    5550 Drag select of 22 residues 
    5551 
    5552 > select up
    5553 
    5554 385 atoms, 387 bonds, 50 residues, 1 model selected 
    5555 
    5556 > hide sel cartoons
    5557 
    5558 > select #2/D:350
    5559 
    5560 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5561 
    5562 > select up
    5563 
    5564 21 atoms, 20 bonds, 3 residues, 1 model selected 
    5565 
    5566 > select up
    5567 
    5568 425 atoms, 433 bonds, 55 residues, 1 model selected 
    5569 
    5570 > select clear
    5571 
    5572 [Repeated 1 time(s)]
    5573 
    5574 > select #2/D:351
    5575 
    5576 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5577 
    5578 > hide sel cartoons
    5579 
    5580 Drag select of 3 residues 
    5581 
    5582 > select up
    5583 
    5584 30 atoms, 29 bonds, 4 residues, 1 model selected 
    5585 
    5586 > select up
    5587 
    5588 425 atoms, 433 bonds, 55 residues, 1 model selected 
    5589 
    5590 > select down
    5591 
    5592 30 atoms, 29 bonds, 4 residues, 1 model selected 
    5593 
    5594 > hide sel cartoons
    5595 
    5596 > select clear
    5597 
    5598 > select #2/D:349
    5599 
    5600 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5601 
    5602 > hide sel cartoons
    5603 
    5604 > select #2/D:283
    5605 
    5606 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5607 
    5608 > select up
    5609 
    5610 45 atoms, 45 bonds, 6 residues, 1 model selected 
    5611 
    5612 > hide sel cartoons
    5613 
    5614 Drag select of 11 residues 
    5615 
    5616 > select up
    5617 
    5618 115 atoms, 113 bonds, 15 residues, 1 model selected 
    5619 
    5620 > hide sel cartoons
    5621 
    5622 > select clear
    5623 
    5624 > select #2/D:108
    5625 
    5626 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5627 
    5628 > hide sel cartoons
    5629 
    5630 > select clear
    5631 
    5632 > select #2/D:138
    5633 
    5634 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5635 
    5636 > select up
    5637 
    5638 42 atoms, 42 bonds, 5 residues, 1 model selected 
    5639 
    5640 > hide sel cartoons
    5641 
    5642 > select #2/D:126
    5643 
    5644 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5645 
    5646 > select up
    5647 
    5648 56 atoms, 55 bonds, 7 residues, 1 model selected 
    5649 
    5650 > hide sel cartoons
    5651 
    5652 Drag select of 8 residues 
    5653 
    5654 > hide sel cartoons
    5655 
    5656 > select #2/D:342
    5657 
    5658 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5659 
    5660 > select up
    5661 
    5662 32 atoms, 32 bonds, 4 residues, 1 model selected 
    5663 
    5664 > hide sel cartoons
    5665 
    5666 Drag select of 13 residues 
    5667 
    5668 > hide sel cartoons
    5669 
    5670 > select #2/D:339
    5671 
    5672 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5673 
    5674 > select #2/D:336
    5675 
    5676 10 atoms, 10 bonds, 1 residue, 1 model selected 
    5677 
    5678 > select #2/D:335
    5679 
    5680 7 atoms, 7 bonds, 1 residue, 1 model selected 
    5681 
    5682 > select clear
    5683 
    5684 [Repeated 1 time(s)]
    5685 
    5686 > select #2/D:337
    5687 
    5688 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5689 
    5690 > show sel atoms
    5691 
    5692 > style sel stick
    5693 
    5694 Changed 8 atom styles 
    5695 
    5696 > hide sel atoms
    5697 
    5698 > select clear
    5699 
    5700 [Repeated 1 time(s)]
    5701 
    5702 > select #2/C:176
    5703 
    5704 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5705 
    5706 > hide sel cartoons
    5707 
    5708 > select clear
    5709 
    5710 [Repeated 1 time(s)]
    5711 
    5712 > select #2/C:177
    5713 
    5714 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5715 
    5716 > hide sel cartoons
    5717 
    5718 > select #2/D:310
    5719 
    5720 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5721 
    5722 > select #2/D:318
    5723 
    5724 12 atoms, 12 bonds, 1 residue, 1 model selected 
    5725 
    5726 > hide sel cartoons
    5727 
    5728 > select #2/D:317
    5729 
    5730 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5731 
    5732 > hide sel cartoons
    5733 
    5734 > select #2/D:316
    5735 
    5736 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5737 
    5738 > hide sel cartoons
    5739 
    5740 > select #2/D:315
    5741 
    5742 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5743 
    5744 > hide sel cartoons
    5745 
    5746 > select #2/D:314
    5747 
    5748 7 atoms, 6 bonds, 1 residue, 1 model selected 
    5749 
    5750 > hide sel cartoons
    5751 
    5752 > select #2/D:330
    5753 
    5754 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5755 
    5756 > hide sel cartoons
    5757 
    5758 > select #2/D:331
    5759 
    5760 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5761 
    5762 > select #2/D:331
    5763 
    5764 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5765 
    5766 > hide sel cartoons
    5767 
    5768 > select #2/D:340
    5769 
    5770 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5771 
    5772 > select #2/C-D:333
    5773 
    5774 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5775 
    5776 > select #2/C-D:333-336
    5777 
    5778 60 atoms, 62 bonds, 8 residues, 1 model selected 
    5779 
    5780 > select #2/C-D:333
    5781 
    5782 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5783 
    5784 > select #2/C-D:333-335
    5785 
    5786 40 atoms, 40 bonds, 6 residues, 1 model selected 
    5787 
    5788 > select #2/C-D:333
    5789 
    5790 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5791 
    5792 > select #2/C-D:331-333
    5793 
    5794 48 atoms, 46 bonds, 6 residues, 1 model selected 
    5795 
    5796 > select #2/C-D:324-325
    5797 
    5798 16 atoms, 14 bonds, 4 residues, 1 model selected 
    5799 
    5800 > select #2/C-D:324-328
    5801 
    5802 70 atoms, 68 bonds, 10 residues, 1 model selected 
    5803 
    5804 > select #2/D:335
    5805 
    5806 7 atoms, 7 bonds, 1 residue, 1 model selected 
    5807 
    5808 > hide sel cartoons
    5809 
    5810 > select #2/C-D:335
    5811 
    5812 14 atoms, 14 bonds, 2 residues, 1 model selected 
    5813 
    5814 > select #2/C-D:335-338
    5815 
    5816 64 atoms, 68 bonds, 8 residues, 1 model selected 
    5817 
    5818 > hide sel cartoons
    5819 
    5820 > select #2/C-D:339
    5821 
    5822 18 atoms, 16 bonds, 2 residues, 1 model selected 
    5823 
    5824 > select #2/C-D:339-340
    5825 
    5826 26 atoms, 24 bonds, 4 residues, 1 model selected 
    5827 
    5828 > hide sel cartoons
    5829 
    5830 > select #2/D:334
    5831 
    5832 5 atoms, 4 bonds, 1 residue, 1 model selected 
    5833 
    5834 > hide sel cartoons
    5835 
    5836 > select #2/C:143
    5837 
    5838 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5839 
    5840 > select #2/C:142
    5841 
    5842 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5843 
    5844 > select #2/C:144
    5845 
    5846 11 atoms, 11 bonds, 1 residue, 1 model selected 
    5847 
    5848 > select clear
    5849 
    5850 > select #2/C:142
    5851 
    5852 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5853 
    5854 > select clear
    5855 
    5856 > select #2/C:144
    5857 
    5858 11 atoms, 11 bonds, 1 residue, 1 model selected 
    5859 
    5860 > select #2/C:142
    5861 
    5862 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5863 
    5864 > select #2/C:143
    5865 
    5866 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5867 
    5868 > hide sel cartoons
    5869 
    5870 > select #2/C:142
    5871 
    5872 4 atoms, 3 bonds, 1 residue, 1 model selected 
    5873 
    5874 > hide sel cartoons
    5875 
    5876 > select clear
    5877 
    5878 > select #2/C:144
    5879 
    5880 11 atoms, 11 bonds, 1 residue, 1 model selected 
    5881 
    5882 > hide sel cartoons
    5883 
    5884 > select #2/C-D:346-347
    5885 
    5886 30 atoms, 28 bonds, 4 residues, 1 model selected 
    5887 
    5888 > select #2/C-D:332
    5889 
    5890 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5891 
    5892 > select #2/C-D:332
    5893 
    5894 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5895 
    5896 > select clear
    5897 
    5898 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/fig_ATP.tif"
    5899 > width 2000 height 1526 supersample 4 transparentBackground true
    5900 
    5901 > select #2/C:188
    5902 
    5903 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5904 
    5905 > hide sel cartoons
    5906 
    5907 > select #2/C:186
    5908 
    5909 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5910 
    5911 > select #2/C:187
    5912 
    5913 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5914 
    5915 > hide sel cartoons
    5916 
    5917 > select #2/C:186
    5918 
    5919 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5920 
    5921 > hide sel cartoons
    5922 
    5923 > select #2/C:185
    5924 
    5925 11 atoms, 10 bonds, 1 residue, 1 model selected 
    5926 
    5927 > select clear
    5928 
    5929 > select #2/C:183
    5930 
    5931 7 atoms, 7 bonds, 1 residue, 1 model selected 
    5932 
    5933 > hide sel cartoons
    5934 
    5935 > show sel cartoons
    5936 
    5937 > select clear
    5938 
    5939 > select #2/C-D:37
    5940 
    5941 18 atoms, 16 bonds, 2 residues, 1 model selected 
    5942 
    5943 > show #!17 models
    5944 
    5945 > hide #!17 models
    5946 
    5947 > show #!14 models
    5948 
    5949 > hide #!14 models
    5950 
    5951 > show #!17 models
    5952 
    5953 > hide #!17 models
    5954 
    5955 > show #!17 models
    5956 
    5957 > combine #17
    5958 
    5959 > hide #!5 models
    5960 
    5961 > show #!5 models
    5962 
    5963 > hide #!17 models
    5964 
    5965 > rename #5 "fig 1D"
    5966 
    5967 Drag select of 27 atoms, 30 bonds, 64 residues 
    5968 
    5969 > hide sel cartoons
    5970 
    5971 [Repeated 1 time(s)]
    5972 
    5973 > hide sel atoms
    5974 
    5975 Drag select of 3 residues 
    5976 
    5977 > hide sel atoms
    5978 
    5979 > hide sel cartoons
    5980 
    5981 Drag select of 15 atoms, 12 bonds, 71 residues, 1 pseudobonds 
    5982 Drag select of 31 residues 
    5983 
    5984 > hide sel cartoons
    5985 
    5986 Drag select of 5 atoms, 2 bonds, 42 residues, 1 pseudobonds 
    5987 
    5988 > hide sel cartoons
    5989 
    5990 Drag select of 57 residues 
    5991 
    5992 > select up
    5993 
    5994 509 atoms, 516 bonds, 68 residues, 1 model selected 
    5995 
    5996 > hide sel cartoons
    5997 
    5998 Drag select of 5 atoms, 2 bonds, 12 residues, 1 pseudobonds 
    5999 
    6000 > hide sel cartoons
    6001 
    6002 > hide sel atoms
    6003 
    6004 Drag select of 31 atoms, 35 bonds, 123 residues 
    6005 
    6006 > select up
    6007 
    6008 1168 atoms, 1203 bonds, 136 residues, 1 model selected 
    6009 
    6010 > hide sel cartoons
    6011 
    6012 > hide sel atoms
    6013 
    6014 Drag select of 73 residues 
    6015 
    6016 > hide sel cartoons
    6017 
    6018 > select #5/D:247
    6019 
    6020 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6021 
    6022 > select up
    6023 
    6024 187 atoms, 189 bonds, 22 residues, 1 model selected 
    6025 
    6026 > hide sel cartoons
    6027 
    6028 Drag select of 3 residues 
    6029 
    6030 > hide sel cartoons
    6031 
    6032 > select #5/D:267
    6033 
    6034 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6035 
    6036 > select up
    6037 
    6038 42 atoms, 41 bonds, 6 residues, 1 model selected 
    6039 Drag select of 9 residues 
    6040 
    6041 > select up
    6042 
    6043 109 atoms, 108 bonds, 15 residues, 1 model selected 
    6044 
    6045 > select up
    6046 
    6047 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    6048 
    6049 > select down
    6050 
    6051 109 atoms, 108 bonds, 15 residues, 1 model selected 
    6052 
    6053 > hide sel cartoons
    6054 
    6055 > select #5/D:268
    6056 
    6057 9 atoms, 8 bonds, 1 residue, 1 model selected 
    6058 
    6059 > hide sel cartoons
    6060 
    6061 Drag select of 4 residues 
    6062 
    6063 > hide sel cartoons
    6064 
    6065 > select #5/D:291
    6066 
    6067 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6068 
    6069 > hide sel cartoons
    6070 
    6071 Drag select of 21 residues 
    6072 
    6073 > select up
    6074 
    6075 251 atoms, 250 bonds, 34 residues, 1 model selected 
    6076 
    6077 > hide sel cartoons
    6078 
    6079 Drag select of 2 residues 
    6080 
    6081 > select up
    6082 
    6083 66 atoms, 66 bonds, 7 residues, 1 model selected 
    6084 
    6085 > hide sel cartoons
    6086 
    6087 Drag select of 12 residues 
    6088 
    6089 > select up
    6090 
    6091 126 atoms, 128 bonds, 15 residues, 1 model selected 
    6092 
    6093 > hide sel cartoons
    6094 
    6095 > select clear
    6096 
    6097 Drag select of 1 residues 
    6098 Drag select of 8 residues 
    6099 [Repeated 1 time(s)]
    6100 
    6101 > hide sel cartoons
    6102 
    6103 Drag select of 3 residues 
    6104 
    6105 > select up
    6106 
    6107 92 atoms, 93 bonds, 11 residues, 1 model selected 
    6108 
    6109 > select down
    6110 
    6111 17 atoms, 3 residues, 1 model selected 
    6112 
    6113 > hide sel atoms
    6114 
    6115 > hide sel cartoons
    6116 
    6117 Drag select of 2 residues 
    6118 
    6119 > select up
    6120 
    6121 50 atoms, 50 bonds, 6 residues, 1 model selected 
    6122 
    6123 > hide sel cartoons
    6124 
    6125 Drag select of 11 residues 
    6126 
    6127 > select up
    6128 
    6129 115 atoms, 116 bonds, 15 residues, 1 model selected 
    6130 
    6131 > select down
    6132 
    6133 92 atoms, 11 residues, 1 model selected 
    6134 
    6135 > hide sel cartoons
    6136 
    6137 > select #5/E:141
    6138 
    6139 5 atoms, 4 bonds, 1 residue, 1 model selected 
    6140 
    6141 > hide sel cartoons
    6142 
    6143 Drag select of 3 residues 
    6144 
    6145 > select up
    6146 
    6147 98 atoms, 97 bonds, 13 residues, 1 model selected 
    6148 Drag select of 2 residues 
    6149 
    6150 > select up
    6151 
    6152 56 atoms, 56 bonds, 7 residues, 1 model selected 
    6153 
    6154 > hide sel cartoons
    6155 
    6156 Drag select of 7 residues 
    6157 
    6158 > select up
    6159 
    6160 66 atoms, 63 bonds, 10 residues, 1 model selected 
    6161 
    6162 > select up
    6163 
    6164 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    6165 
    6166 > select down
    6167 
    6168 66 atoms, 63 bonds, 10 residues, 1 model selected 
    6169 
    6170 > hide sel cartoons
    6171 
    6172 Drag select of 9 residues 
    6173 
    6174 > select clear
    6175 
    6176 Drag select of 14 residues 
    6177 
    6178 > select up
    6179 
    6180 142 atoms, 141 bonds, 19 residues, 1 model selected 
    6181 
    6182 > hide sel cartoons
    6183 
    6184 Drag select of 18 residues 
    6185 
    6186 > select up
    6187 
    6188 248 atoms, 248 bonds, 30 residues, 1 model selected 
    6189 
    6190 > hide sel cartoons
    6191 
    6192 Drag select of 3 residues 
    6193 
    6194 > select up
    6195 
    6196 28 atoms, 27 bonds, 5 residues, 1 model selected 
    6197 
    6198 > hide sel cartoons
    6199 
    6200 Drag select of 2 residues 
    6201 
    6202 > hide sel cartoons
    6203 
    6204 Drag select of 5 residues 
    6205 
    6206 > select clear
    6207 
    6208 Drag select of 5 residues 
    6209 Drag select of 2 residues 
    6210 
    6211 > hide sel cartoons
    6212 
    6213 > select #5/E:137
    6214 
    6215 6 atoms, 5 bonds, 1 residue, 1 model selected 
    6216 
    6217 > hide sel cartoons
    6218 
    6219 > select #5/E:136
    6220 
    6221 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6222 
    6223 > hide sel cartoons
    6224 
    6225 > select #5/D:314
    6226 
    6227 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6228 
    6229 > hide sel cartoons
    6230 
    6231 > select #5/D:315
    6232 
    6233 12 atoms, 12 bonds, 1 residue, 1 model selected 
    6234 
    6235 > hide sel atoms
    6236 
    6237 [Repeated 2 time(s)]
    6238 
    6239 > show sel atoms
    6240 
    6241 > style sel stick
    6242 
    6243 Changed 12 atom styles 
    6244 
    6245 > select #5/D:316
    6246 
    6247 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6248 
    6249 > select #2/D:333
    6250 
    6251 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6252 
    6253 > show sel atoms
    6254 
    6255 [Repeated 1 time(s)]
    6256 
    6257 > style sel stick
    6258 
    6259 Changed 8 atom styles 
    6260 Drag select of 3 residues 
    6261 
    6262 > hide sel cartoons
    6263 
    6264 Drag select of 3 residues 
    6265 
    6266 > hide sel cartoons
    6267 
    6268 > select clear
    6269 
    6270 > select #5/D:316
    6271 
    6272 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6273 Alignment identifier is 5/D 
    6274 
    6275 > select #5/D:315
    6276 
    6277 12 atoms, 12 bonds, 1 residue, 1 model selected 
    6278 
    6279 > select #5/D:315
    6280 
    6281 12 atoms, 12 bonds, 1 residue, 1 model selected 
    6282 
    6283 > select #5/D:315
    6284 
    6285 12 atoms, 12 bonds, 1 residue, 1 model selected 
    6286 
    6287 > select #5/D:315-317
    6288 
    6289 26 atoms, 26 bonds, 3 residues, 1 model selected 
    6290 
    6291 > hide sel cartoons
    6292 
    6293 > show sel cartoons
    6294 
    6295 > select #5/D:317
    6296 
    6297 6 atoms, 5 bonds, 1 residue, 1 model selected 
    6298 
    6299 > show sel atoms
    6300 
    6301 > hide sel atoms
    6302 
    6303 > select #5/D:316
    6304 
    6305 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6306 
    6307 > show sel atoms
    6308 
    6309 > style sel stick
    6310 
    6311 Changed 8 atom styles 
    6312 
    6313 > select #5/D:296
    6314 
    6315 6 atoms, 5 bonds, 1 residue, 1 model selected 
    6316 
    6317 > show sel atoms
    6318 
    6319 > style sel stick
    6320 
    6321 Changed 6 atom styles 
    6322 
    6323 > select #5/D:297
    6324 
    6325 7 atoms, 6 bonds, 1 residue, 1 model selected 
    6326 
    6327 > hide sel cartoons
    6328 
    6329 > select #5/D:293
    6330 
    6331 5 atoms, 4 bonds, 1 residue, 1 model selected 
    6332 
    6333 > show sel atoms
    6334 
    6335 > style sel stick
    6336 
    6337 Changed 5 atom styles 
    6338 
    6339 > select #5/D:294
    6340 
    6341 10 atoms, 10 bonds, 1 residue, 1 model selected 
    6342 
    6343 > style sel stick
    6344 
    6345 Changed 10 atom styles 
    6346 
    6347 > show sel atoms
    6348 
    6349 > select #5/E:163
    6350 
    6351 9 atoms, 8 bonds, 1 residue, 1 model selected 
    6352 
    6353 > show sel atoms
    6354 
    6355 > style sel stick
    6356 
    6357 Changed 9 atom styles 
    6358 
    6359 > select #5/E:165
    6360 
    6361 7 atoms, 6 bonds, 1 residue, 1 model selected 
    6362 
    6363 > show sel atoms
    6364 
    6365 > style sel stick
    6366 
    6367 Changed 7 atom styles 
    6368 
    6369 > select #5/E:170
    6370 
    6371 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6372 
    6373 > show sel atoms
    6374 
    6375 > style sel stick
    6376 
    6377 Changed 11 atom styles 
    6378 
    6379 > select #5/E:134
    6380 
    6381 7 atoms, 6 bonds, 1 residue, 1 model selected 
    6382 
    6383 > show sel atoms
    6384 
    6385 > style sel stick
    6386 
    6387 Changed 7 atom styles 
    6388 
    6389 > select #5/E:131
    6390 
    6391 7 atoms, 6 bonds, 1 residue, 1 model selected 
    6392 
    6393 > show sel atoms
    6394 
    6395 > style sel stick
    6396 
    6397 Changed 7 atom styles 
    6398 
    6399 > hide #!5 models
    6400 
    6401 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/fig_ATP_2.tif"
    6402 > width 2000 height 1526 supersample 4 transparentBackground true
    6403 
    6404 > show #!5 models
    6405 
    6406 > select clear
    6407 
    6408 > save "/Users/mimbert/OneDrive - Institut Pasteur
    6409 > Paris/Papers/fig_ATP_Rad51.tif" width 2000 height 1526 supersample 4
    6410 > transparentBackground true
    6411 
    6412 > save "/Users/mimbert/OneDrive - Institut Pasteur
    6413 > Paris/Papers/fig1_261224.cxs"
    6414 
    6415 > hide #!5 models
    6416 
    6417 > hide #!2 models
    6418 
    6419 > show #!16 models
    6420 
    6421 > show #!15 models
    6422 
    6423 > hide #!15 models
    6424 
    6425 > show #!15 models
    6426 
    6427 > hide #!16 models
    6428 
    6429 > show #!16 models
    6430 
    6431 > hide #!16 models
    6432 
    6433 > hide #!15 models
    6434 
    6435 > show #!17 models
    6436 
    6437 > hide #!17 models
    6438 
    6439 > show #!18 models
    6440 
    6441 > combine #18
    6442 
    6443 > rename #8 fig1E
    6444 
    6445 > select add #8
    6446 
    6447 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    6448 Alignment identifier is 1 
    6449 Alignment identifier is 8/W 
    6450 
    6451 > select #8/C-D:249
    6452 
    6453 22 atoms, 20 bonds, 2 residues, 1 model selected 
    6454 
    6455 > show sel atoms
    6456 
    6457 > style sel stick
    6458 
    6459 Changed 22 atom styles 
    6460 
    6461 > select #8/C-D:290
    6462 
    6463 18 atoms, 16 bonds, 2 residues, 1 model selected 
    6464 
    6465 > select #8/C-D:290
    6466 
    6467 18 atoms, 16 bonds, 2 residues, 1 model selected 
    6468 
    6469 > show sel atoms
    6470 
    6471 > style sel stick
    6472 
    6473 Changed 18 atom styles 
    6474 
    6475 > select #8/C-D:261
    6476 
    6477 22 atoms, 20 bonds, 2 residues, 1 model selected 
    6478 
    6479 > select #8/C-D:261
    6480 
    6481 22 atoms, 20 bonds, 2 residues, 1 model selected 
    6482 
    6483 > show sel atoms
    6484 
    6485 > style sel stick
    6486 
    6487 Changed 22 atom styles 
    6488 
    6489 > select #8/C-D:305
    6490 
    6491 8 atoms, 6 bonds, 2 residues, 1 model selected 
    6492 
    6493 > select #8/C-D:305
    6494 
    6495 8 atoms, 6 bonds, 2 residues, 1 model selected 
    6496 
    6497 > show sel atoms
    6498 
    6499 > style sel stick
    6500 
    6501 Changed 8 atom styles 
    6502 
    6503 > show sel atoms
    6504 
    6505 > select #8/C-D:262
    6506 
    6507 18 atoms, 16 bonds, 2 residues, 1 model selected 
    6508 
    6509 > select #8/C-D:262
    6510 
    6511 18 atoms, 16 bonds, 2 residues, 1 model selected 
    6512 
    6513 > show sel atoms
    6514 
    6515 > style sel stick
    6516 
    6517 Changed 18 atom styles 
    6518 
    6519 > select #8/C-D:291
    6520 
    6521 10 atoms, 8 bonds, 2 residues, 1 model selected 
    6522 
    6523 > select #8/C-D:291
    6524 
    6525 10 atoms, 8 bonds, 2 residues, 1 model selected 
    6526 
    6527 > show sel atoms
    6528 
    6529 > style sel stick
    6530 
    6531 Changed 10 atom styles 
    6532 
    6533 > select #8/C-D:306
    6534 
    6535 8 atoms, 6 bonds, 2 residues, 1 model selected 
    6536 
    6537 > select #8/C-D:306
    6538 
    6539 8 atoms, 6 bonds, 2 residues, 1 model selected 
    6540 
    6541 > show sel atoms
    6542 
    6543 > style sel stick
    6544 
    6545 Changed 8 atom styles 
    6546 
    6547 > select #8/C-D:249
    6548 
    6549 22 atoms, 20 bonds, 2 residues, 1 model selected 
    6550 
    6551 > show sel atoms
    6552 
    6553 > style sel stick
    6554 
    6555 Changed 22 atom styles 
    6556 
    6557 > select #8/C-D:293
    6558 
    6559 14 atoms, 14 bonds, 2 residues, 1 model selected 
    6560 
    6561 > select #8/C-D:293
    6562 
    6563 14 atoms, 14 bonds, 2 residues, 1 model selected 
    6564 
    6565 > show sel atoms
    6566 
    6567 > style sel stick
    6568 
    6569 Changed 14 atom styles 
    6570 
    6571 > select #18/D:302
    6572 
    6573 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6574 
    6575 > select up
    6576 
    6577 25 atoms, 25 bonds, 3 residues, 1 model selected 
    6578 
    6579 > select up
    6580 
    6581 425 atoms, 433 bonds, 55 residues, 1 model selected 
    6582 
    6583 > select up
    6584 
    6585 456 atoms, 464 bonds, 59 residues, 1 model selected 
    6586 
    6587 > select up
    6588 
    6589 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    6590 
    6591 > select up
    6592 
    6593 5086 atoms, 5183 bonds, 642 residues, 1 model selected 
    6594 
    6595 > select up
    6596 
    6597 72658 atoms, 74168 bonds, 9083 residues, 21 models selected 
    6598 
    6599 > select up
    6600 
    6601 72658 atoms, 74168 bonds, 2 pseudobonds, 9083 residues, 23 models selected 
    6602 
    6603 > select down
    6604 
    6605 72658 atoms, 74168 bonds, 9083 residues, 22 models selected 
    6606 
    6607 > select down
    6608 
    6609 5086 atoms, 5183 bonds, 642 residues, 2 models selected 
    6610 
    6611 > select down
    6612 
    6613 2426 atoms, 2462 bonds, 314 residues, 2 models selected 
    6614 
    6615 > select down
    6616 
    6617 456 atoms, 464 bonds, 59 residues, 2 models selected 
    6618 
    6619 > select down
    6620 
    6621 425 atoms, 433 bonds, 55 residues, 1 model selected 
    6622 
    6623 > select down
    6624 
    6625 25 atoms, 25 bonds, 3 residues, 1 model selected 
    6626 
    6627 > select up
    6628 
    6629 425 atoms, 433 bonds, 55 residues, 1 model selected 
    6630 
    6631 > select up
    6632 
    6633 456 atoms, 464 bonds, 59 residues, 1 model selected 
    6634 
    6635 > select up
    6636 
    6637 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    6638 
    6639 > hide sel cartoons
    6640 
    6641 [Repeated 1 time(s)]
    6642 
    6643 > hide sel atoms
    6644 
    6645 > select #8/D:302
    6646 
    6647 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6648 
    6649 > select up
    6650 
    6651 25 atoms, 25 bonds, 3 residues, 1 model selected 
    6652 
    6653 > select up
    6654 
    6655 425 atoms, 433 bonds, 55 residues, 1 model selected 
    6656 
    6657 > select up
    6658 
    6659 456 atoms, 464 bonds, 59 residues, 1 model selected 
    6660 
    6661 > select up
    6662 
    6663 2426 atoms, 2462 bonds, 314 residues, 1 model selected 
    6664 
    6665 > hide sel cartoons
    6666 
    6667 > hide sel atoms
    6668 
    6669 > select up
    6670 
    6671 2 atoms, 1 bond, 1 residue, 1 model selected 
    6672 
    6673 > select up
    6674 
    6675 31 atoms, 33 bonds, 1 residue, 1 model selected 
    6676 
    6677 > select up
    6678 
    6679 33 atoms, 33 bonds, 3 residues, 1 model selected 
    6680 
    6681 > select up
    6682 
    6683 5086 atoms, 5183 bonds, 642 residues, 1 model selected 
    6684 
    6685 > select down
    6686 
    6687 33 atoms, 33 bonds, 3 residues, 1 model selected 
    6688 
    6689 > select down
    6690 
    6691 31 atoms, 33 bonds, 1 residue, 1 model selected 
    6692 
    6693 > select up
    6694 
    6695 33 atoms, 33 bonds, 3 residues, 1 model selected 
    6696 
    6697 > select down
    6698 
    6699 31 atoms, 33 bonds, 1 residue, 1 model selected 
    6700 
    6701 > hide sel cartoons
    6702 
    6703 > hide sel atoms
    6704 
    6705 > select up
    6706 
    6707 2 atoms, 1 bond, 1 residue, 1 model selected 
    6708 
    6709 > select up
    6710 
    6711 31 atoms, 33 bonds, 1 residue, 1 model selected 
    6712 
    6713 > select up
    6714 
    6715 33 atoms, 33 bonds, 3 residues, 1 model selected 
    6716 
    6717 > select down
    6718 
    6719 31 atoms, 33 bonds, 1 residue, 1 model selected 
    6720 
    6721 > hide sel surfaces
    6722 
    6723 > hide sel cartoons
    6724 
    6725 > hide sel atoms
    6726 
    6727 > select #18/N:401@CA
    6728 
    6729 1 atom, 1 residue, 1 model selected 
    6730 
    6731 > hide sel atoms
    6732 
    6733 > select clear
    6734 
    6735 [Repeated 1 time(s)]
    6736 
    6737 > select #8/N:401@CA
    6738 
    6739 1 atom, 1 residue, 1 model selected 
    6740 
    6741 > hide sel cartoons
    6742 
    6743 [Repeated 2 time(s)]
    6744 
    6745 > hide sel atoms
    6746 
    6747 > select #18/O:402@CA
    6748 
    6749 1 atom, 1 residue, 1 model selected 
    6750 
    6751 > hide sel atoms
    6752 
    6753 [Repeated 1 time(s)]
    6754 
    6755 > select #8/O:402@CA
    6756 
    6757 1 atom, 1 residue, 1 model selected 
    6758 
    6759 > hide sel atoms
    6760 
    6761 Drag select of 16 residues, 4 atoms, 4 bonds 
    6762 
    6763 > select #18/W:24
    6764 
    6765 21 atoms, 23 bonds, 1 residue, 1 model selected 
    6766 
    6767 > hide sel atoms
    6768 
    6769 > hide sel cartoons
    6770 
    6771 > hide sel atoms
    6772 
    6773 > hide #!18 models
    6774 
    6775 > show #!18 models
    6776 
    6777 > hide #!18 models
    6778 
    6779 > select add #18
    6780 
    6781 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    6782 
    6783 > select subtract #18
    6784 
    6785 Nothing selected 
    6786 
    6787 > select #8/W:24
    6788 
    6789 21 atoms, 23 bonds, 1 residue, 1 model selected 
    6790 
    6791 > hide sel cartoons
    6792 
    6793 > hide sel atoms
    6794 
    6795 > select up
    6796 
    6797 2 atoms, 1 bond, 1 residue, 1 model selected 
    6798 
    6799 > select up
    6800 
    6801 21 atoms, 23 bonds, 1 residue, 1 model selected 
    6802 
    6803 > hide sel cartoons
    6804 
    6805 > hide sel atoms
    6806 
    6807 > select #8/W:23
    6808 
    6809 21 atoms, 23 bonds, 1 residue, 1 model selected 
    6810 
    6811 > hide sel atoms
    6812 
    6813 > show sel atoms
    6814 
    6815 > show sel cartoons
    6816 
    6817 > hide #!8 models
    6818 
    6819 > select add #8
    6820 
    6821 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    6822 
    6823 > select subtract #8
    6824 
    6825 Nothing selected 
    6826 
    6827 > show #!18 models
    6828 
    6829 > select add #18
    6830 
    6831 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    6832 
    6833 > show sel cartoons
    6834 
    6835 > show sel atoms
    6836 
    6837 > hide sel atoms
    6838 
    6839 > select #18/W:17
    6840 
    6841 21 atoms, 23 bonds, 1 residue, 1 model selected 
    6842 
    6843 > select up
    6844 
    6845 168 atoms, 191 bonds, 8 residues, 1 model selected 
    6846 
    6847 > show sel atoms
    6848 
    6849 > select add #18
    6850 
    6851 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    6852 
    6853 > select ::name="ATP"::name="CA"
    6854 
    6855 1152 atoms, 1155 bonds, 11 pseudobonds, 102 residues, 18 models selected 
    6856 
    6857 > show sel & #!18 atoms
    6858 
    6859 > select clear
    6860 
    6861 > hide #!18 models
    6862 
    6863 > show #11 models
    6864 
    6865 > hide #11 models
    6866 
    6867 > show #!8 models
    6868 
    6869 Drag select of 2 atoms, 7 residues 
    6870 
    6871 > select clear
    6872 
    6873 > select #8/C:105
    6874 
    6875 8 atoms, 7 bonds, 1 residue, 1 model selected 
    6876 
    6877 > select up
    6878 
    6879 51 atoms, 51 bonds, 6 residues, 1 model selected 
    6880 
    6881 > select up
    6882 
    6883 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    6884 
    6885 > select down
    6886 
    6887 51 atoms, 51 bonds, 6 residues, 1 model selected 
    6888 
    6889 > select up
    6890 
    6891 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    6892 
    6893 > select down
    6894 
    6895 51 atoms, 51 bonds, 6 residues, 1 model selected 
    6896 
    6897 > select #8/C:39
    6898 
    6899 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6900 
    6901 > select up
    6902 
    6903 35 atoms, 34 bonds, 4 residues, 1 model selected 
    6904 
    6905 > select up
    6906 
    6907 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    6908 
    6909 > select up
    6910 
    6911 2016 atoms, 2044 bonds, 261 residues, 1 model selected 
    6912 
    6913 > select down
    6914 
    6915 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    6916 
    6917 > select down
    6918 
    6919 35 atoms, 34 bonds, 4 residues, 1 model selected 
    6920 
    6921 > select down
    6922 
    6923 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6924 
    6925 > select down
    6926 
    6927 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6928 
    6929 > select down
    6930 
    6931 11 atoms, 10 bonds, 1 residue, 1 model selected 
    6932 
    6933 > select clear
    6934 
    6935 Drag select of 70 residues 
    6936 
    6937 > hide sel cartoons
    6938 
    6939 > select clear
    6940 
    6941 Drag select of 1 residues 
    6942 
    6943 > hide sel cartoons
    6944 
    6945 Drag select of 1 residues 
    6946 Drag select of 8 residues 
    6947 
    6948 > select up
    6949 
    6950 140 atoms, 140 bonds, 18 residues, 1 model selected 
    6951 
    6952 > hide sel cartoons
    6953 
    6954 Drag select of 7 atoms, 5 bonds, 24 residues 
    6955 Drag select of 33 atoms, 33 bonds, 170 residues 
    6956 
    6957 > hide sel cartoons
    6958 
    6959 Drag select of 33 atoms, 33 bonds, 8 residues 
    6960 
    6961 > hide sel cartoons
    6962 
    6963 > hide sel atoms
    6964 
    6965 Drag select of 2 residues 
    6966 
    6967 > hide sel cartoons
    6968 
    6969 > select clear
    6970 
    6971 > select #8/C:142
    6972 
    6973 4 atoms, 3 bonds, 1 residue, 1 model selected 
    6974 
    6975 > hide sel cartoons
    6976 
    6977 Drag select of 6 residues 
    6978 
    6979 > select up
    6980 
    6981 168 atoms, 170 bonds, 21 residues, 1 model selected 
    6982 
    6983 > hide sel cartoons
    6984 
    6985 Drag select of 4 residues 
    6986 
    6987 > hide sel cartoons
    6988 
    6989 > select clear
    6990 
    6991 [Repeated 1 time(s)]Drag select of 4 residues 
    6992 
    6993 > hide sel cartoons
    6994 
    6995 > hide sel atoms
    6996 
    6997 > undo
    6998 
    6999 [Repeated 1 time(s)]
    7000 
    7001 > select clear
    7002 
    7003 > view name fig1E
    7004 
    7005 > show #!17 models
    7006 
    7007 > combine #17
    7008 
    7009 > hide #!17 models
    7010 
    7011 Drag select of 63 residues 
    7012 
    7013 > select up
    7014 
    7015 509 atoms, 516 bonds, 68 residues, 1 model selected 
    7016 
    7017 > hide sel cartoons
    7018 
    7019 Drag select of 52 residues 
    7020 
    7021 > select up
    7022 
    7023 485 atoms, 489 bonds, 65 residues, 1 model selected 
    7024 
    7025 > hide sel cartoons
    7026 
    7027 Drag select of 3 residues 
    7028 
    7029 > hide sel cartoons
    7030 
    7031 Drag select of 141 residues 
    7032 
    7033 > hide sel cartoons
    7034 
    7035 Drag select of 18 atoms, 20 bonds, 120 residues 
    7036 
    7037 > hide sel cartoons
    7038 
    7039 > hide sel atoms
    7040 
    7041 Drag select of 13 residues 
    7042 
    7043 > hide sel cartoons
    7044 
    7045 Drag select of 32 atoms, 33 bonds, 38 residues, 1 pseudobonds 
    7046 
    7047 > hide sel cartoons
    7048 
    7049 > hide sel atoms
    7050 
    7051 Drag select of 10 residues 
    7052 Drag select of 26 residues 
    7053 
    7054 > select up
    7055 
    7056 454 atoms, 457 bonds, 57 residues, 1 model selected 
    7057 
    7058 > select down
    7059 
    7060 209 atoms, 26 residues, 1 model selected 
    7061 
    7062 > hide sel cartoons
    7063 
    7064 Drag select of 3 atoms, 1 bonds, 13 residues 
    7065 
    7066 > hide sel cartoons
    7067 
    7068 Drag select of 35 residues 
    7069 
    7070 > hide sel cartoons
    7071 
    7072 > select #19/D:239
    7073 
    7074 6 atoms, 5 bonds, 1 residue, 1 model selected 
    7075 
    7076 > hide sel atoms
    7077 
    7078 [Repeated 3 time(s)]
    7079 
    7080 > style sel stick
    7081 
    7082 Changed 6 atom styles 
    7083 
    7084 > select #19/D:238
    7085 
    7086 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7087 
    7088 > hide sel atoms
    7089 
    7090 [Repeated 1 time(s)]
    7091 
    7092 > show sel atoms
    7093 
    7094 > style sel stick
    7095 
    7096 Changed 8 atom styles 
    7097 
    7098 > select #19/D:239
    7099 
    7100 6 atoms, 5 bonds, 1 residue, 1 model selected 
    7101 
    7102 > show sel atoms
    7103 
    7104 > select #19/D:288
    7105 
    7106 4 atoms, 3 bonds, 1 residue, 1 model selected 
    7107 
    7108 > show #!16 models
    7109 
    7110 > hide #!16 models
    7111 
    7112 > show #!16 models
    7113 
    7114 > hide #!16 models
    7115 
    7116 > show #!18 models
    7117 
    7118 > select #18/D:291
    7119 
    7120 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7121 
    7122 > select #18/D:258
    7123 
    7124 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7125 
    7126 > show sel atoms
    7127 
    7128 > style sel stick
    7129 
    7130 Changed 8 atom styles 
    7131 
    7132 > select #18/C:306
    7133 
    7134 4 atoms, 3 bonds, 1 residue, 1 model selected 
    7135 
    7136 > select #19/E:290
    7137 
    7138 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7139 
    7140 > select #18/C:307
    7141 
    7142 10 atoms, 10 bonds, 1 residue, 1 model selected 
    7143 
    7144 > show sel atoms
    7145 
    7146 > style sel stick
    7147 
    7148 Changed 10 atom styles 
    7149 
    7150 > hide sel atoms
    7151 
    7152 > select #18/C:258
    7153 
    7154 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7155 
    7156 > show sel atoms
    7157 
    7158 > style sel stick
    7159 
    7160 Changed 8 atom styles 
    7161 
    7162 > hide sel atoms
    7163 
    7164 > hide #!19 models
    7165 
    7166 > show #!19 models
    7167 
    7168 > hide #!18 models
    7169 
    7170 > select #19/D:239
    7171 
    7172 6 atoms, 5 bonds, 1 residue, 1 model selected 
    7173 
    7174 > hide sel cartoons
    7175 
    7176 > hide sel atoms
    7177 
    7178 > show sel cartoons
    7179 
    7180 > select #19/D:229
    7181 
    7182 11 atoms, 10 bonds, 1 residue, 1 model selected 
    7183 
    7184 > hide sel cartoons
    7185 
    7186 Drag select of 15 atoms, 12 bonds, 23 residues, 4 pseudobonds 
    7187 
    7188 > hide sel cartoons
    7189 
    7190 > hide sel atoms
    7191 
    7192 > select #19/D:295
    7193 
    7194 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7195 
    7196 > hide sel cartoons
    7197 
    7198 Drag select of 9 residues, 1 pseudobonds 
    7199 
    7200 > select down
    7201 
    7202 67 atoms, 1 pseudobond, 9 residues, 2 models selected 
    7203 
    7204 > select down
    7205 
    7206 67 atoms, 1 pseudobond, 9 residues, 2 models selected 
    7207 
    7208 > select up
    7209 
    7210 2376 atoms, 2410 bonds, 1 pseudobond, 310 residues, 2 models selected 
    7211 
    7212 > select down
    7213 
    7214 67 atoms, 1 pseudobond, 9 residues, 2 models selected 
    7215 
    7216 > hide sel cartoons
    7217 
    7218 > select #19/D:290
    7219 
    7220 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7221 
    7222 > select up
    7223 
    7224 48 atoms, 48 bonds, 7 residues, 1 model selected 
    7225 
    7226 > select up
    7227 
    7228 429 atoms, 436 bonds, 57 residues, 1 model selected 
    7229 
    7230 > hide sel cartoons
    7231 
    7232 > select #19/D:246
    7233 
    7234 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7235 
    7236 > hide sel cartoons
    7237 
    7238 > select #19/E:293
    7239 
    7240 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7241 
    7242 > select #19/E:294
    7243 
    7244 10 atoms, 10 bonds, 1 residue, 1 model selected 
    7245 
    7246 > select up
    7247 
    7248 48 atoms, 48 bonds, 7 residues, 1 model selected 
    7249 
    7250 > select #19/E:295
    7251 
    7252 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7253 
    7254 > select up
    7255 
    7256 48 atoms, 48 bonds, 7 residues, 1 model selected 
    7257 
    7258 > select #19/E:295
    7259 
    7260 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7261 
    7262 > hide sel cartoons
    7263 
    7264 > select clear
    7265 
    7266 > select #19/E:294
    7267 
    7268 10 atoms, 10 bonds, 1 residue, 1 model selected 
    7269 
    7270 > hide sel cartoons
    7271 
    7272 > select #19/E:292
    7273 
    7274 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7275 
    7276 > select #19/E:293
    7277 
    7278 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7279 
    7280 > hide sel cartoons
    7281 
    7282 > select #19/E:292
    7283 
    7284 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7285 
    7286 > hide sel cartoons
    7287 
    7288 Drag select of 4 residues 
    7289 
    7290 > hide sel cartoons
    7291 
    7292 > select #19/E:228
    7293 
    7294 12 atoms, 12 bonds, 1 residue, 1 model selected 
    7295 
    7296 > hide sel cartoons
    7297 
    7298 Drag select of 7 residues 
    7299 
    7300 > hide sel cartoons
    7301 
    7302 > select #8/C:262
    7303 
    7304 9 atoms, 8 bonds, 1 residue, 1 model selected 
    7305 
    7306 > undo
    7307 
    7308 [Repeated 1 time(s)]
    7309 
    7310 > select #8/C:263
    7311 
    7312 9 atoms, 8 bonds, 1 residue, 1 model selected 
    7313 
    7314 > hide sel cartoons
    7315 
    7316 > select clear
    7317 
    7318 [Repeated 1 time(s)]
    7319 
    7320 > select #19/W:21
    7321 
    7322 21 atoms, 23 bonds, 1 residue, 1 model selected 
    7323 
    7324 > hide sel atoms
    7325 
    7326 > hide sel cartoons
    7327 
    7328 > select #19/D:239
    7329 
    7330 6 atoms, 5 bonds, 1 residue, 1 model selected 
    7331 
    7332 > show sel atoms
    7333 
    7334 > select #19/D:235
    7335 
    7336 11 atoms, 10 bonds, 1 residue, 1 model selected 
    7337 
    7338 > select up
    7339 
    7340 24 atoms, 23 bonds, 3 residues, 1 model selected 
    7341 
    7342 > select up
    7343 
    7344 1947 atoms, 1974 bonds, 253 residues, 1 model selected 
    7345 
    7346 > select clear
    7347 
    7348 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/fig_
    7349 > PRO_LEU_Ludo.tif" width 2000 height 1526 supersample 4 transparentBackground
    7350 > true
    7351 
    7352 Drag select of 6 atoms, 6 bonds, 12 residues 
    7353 
    7354 > hide sel cartoons
    7355 
    7356 > hide sel atoms
    7357 
    7358 > view fig1E
    7359 
    7360 > hide #!19 models
    7361 
    7362 > save "/Users/mimbert/OneDrive - Institut Pasteur
    7363 > Paris/Papers/fig1E_RadA.tif" width 2000 height 1526 supersample 4
    7364 > transparentBackground true
    7365 
    7366 > show #!19 models
    7367 
    7368 > select #19/E:270
    7369 
    7370 7 atoms, 6 bonds, 1 residue, 1 model selected 
    7371 
    7372 > show sel atoms
    7373 
    7374 > style sel stick
    7375 
    7376 Changed 7 atom styles 
    7377 
    7378 > select #19/E:273
    7379 
    7380 7 atoms, 6 bonds, 1 residue, 1 model selected 
    7381 
    7382 > show sel atoms
    7383 
    7384 > style sel stick
    7385 
    7386 Changed 7 atom styles 
    7387 
    7388 > select #19/E:229
    7389 
    7390 11 atoms, 10 bonds, 1 residue, 1 model selected 
    7391 
    7392 > show sel atoms
    7393 
    7394 > style sel stick
    7395 
    7396 Changed 11 atom styles 
    7397 
    7398 > select #19/E:242
    7399 
    7400 9 atoms, 8 bonds, 1 residue, 1 model selected 
    7401 
    7402 > show sel atoms
    7403 
    7404 > style sel stick
    7405 
    7406 Changed 9 atom styles 
    7407 
    7408 > select #19/E:238
    7409 
    7410 8 atoms, 7 bonds, 1 residue, 1 model selected 
    7411 
    7412 > show sel atoms
    7413 
    7414 > style sel stick
    7415 
    7416 Changed 8 atom styles 
    7417 
    7418 > hide sel atoms
    7419 
    7420 > select #19/E:241
    7421 
    7422 11 atoms, 10 bonds, 1 residue, 1 model selected 
    7423 
    7424 > show sel atoms
    7425 
    7426 > style sel stick
    7427 
    7428 Changed 11 atom styles 
    7429 
    7430 > select #19/E:271
    7431 
    7432 5 atoms, 4 bonds, 1 residue, 1 model selected 
    7433 
    7434 > show sel atoms
    7435 
    7436 > style sel stick
    7437 
    7438 Changed 5 atom styles 
    7439 
    7440 > view fig1E
    7441 
    7442 > select clear
    7443 
    7444 > save "/Users/mimbert/OneDrive - Institut Pasteur
    7445 > Paris/Papers/fig1E_Rad51.tif" width 2000 height 1526 supersample 4
    7446 > transparentBackground true
    7447 
    7448 > hide #!19 models
    7449 
    7450 > save "/Users/mimbert/OneDrive - Institut Pasteur
    7451 > Paris/Papers/fig1_261224.cxs"
    7452 
    7453 > show #!19 models
    7454 
    7455 > rename #19 Fig1F_Rad51_ADN_RadA
    7456 
    7457 > hide #!19 models
    7458 
    7459 > show #!19 models
    7460 
    7461 > hide #!8 models
    7462 
    7463 > show #!8 models
    7464 
    7465 > hide #!8 models
    7466 
    7467 > hide #!19 models
    7468 
    7469 > show #!18 models
    7470 
    7471 > combine #18
    7472 
    7473 > hide #!18 models
    7474 
    7475 > show #!6 models
    7476 
    7477 > hide #!6 models
    7478 
    7479 > select add #20
    7480 
    7481 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7482 Alignment identifier is 1 
    7483 Alignment identifier is 20/W 
    7484 
    7485 > select #20/C-D:105
    7486 
    7487 16 atoms, 14 bonds, 2 residues, 1 model selected 
    7488 
    7489 > select #20/C-D:105
    7490 
    7491 16 atoms, 14 bonds, 2 residues, 1 model selected 
    7492 
    7493 > show sel atoms
    7494 
    7495 > style sel stick
    7496 
    7497 Changed 16 atom styles 
    7498 
    7499 > select #20/C-D:202
    7500 
    7501 18 atoms, 16 bonds, 2 residues, 1 model selected 
    7502 
    7503 > select #20/C-D:202
    7504 
    7505 18 atoms, 16 bonds, 2 residues, 1 model selected 
    7506 
    7507 > style sel stick
    7508 
    7509 Changed 18 atom styles 
    7510 
    7511 > show sel atoms
    7512 
    7513 > style sel stick
    7514 
    7515 Changed 18 atom styles 
    7516 
    7517 > ui mousemode right label
    7518 
    7519 > ui mousemode right distance
    7520 
    7521 > ui tool show Contacts
    7522 
    7523 > contacts interModel false ignoreHiddenModels true select true color #a46c8a
    7524 > reveal true
    7525 
    7526 2235 contacts 
    7527 
    7528 > undo
    7529 
    7530 [Repeated 2 time(s)]
    7531 
    7532 > hide sel atoms
    7533 
    7534 > hide sel cartoons
    7535 
    7536 [Repeated 1 time(s)]
    7537 
    7538 > show sel cartoons
    7539 
    7540 > hide sel atoms
    7541 
    7542 > show sel atoms
    7543 
    7544 > hide sel atoms
    7545 
    7546 > hide #21 models
    7547 
    7548 > show #21 models
    7549 
    7550 > hide #21 models
    7551 
    7552 > hide #!20 models
    7553 
    7554 > show #!20 models
    7555 
    7556 > select add #20
    7557 
    7558 5086 atoms, 5183 bonds, 2239 pseudobonds, 642 residues, 3 models selected 
    7559 
    7560 > hide sel atoms
    7561 
    7562 > show #21 models
    7563 
    7564 > close #21
    7565 
    7566 > ui tool show Contacts
    7567 
    7568 > contacts intraModel false intraMol false ignoreHiddenModels true select true
    7569 > color #a46c8a reveal true
    7570 
    7571 No contacts 
    7572 
    7573 > contacts intraMol false ignoreHiddenModels true select true color #a46c8a
    7574 > reveal true
    7575 
    7576 339 contacts 
    7577 
    7578 > hide #21 models
    7579 
    7580 > hide sel atoms
    7581 
    7582 > hide sel cartoons
    7583 
    7584 [Repeated 1 time(s)]
    7585 
    7586 > select add #20
    7587 
    7588 5086 atoms, 5183 bonds, 362 pseudobonds, 642 residues, 4 models selected 
    7589 
    7590 > hide sel atoms
    7591 
    7592 > show sel atoms
    7593 
    7594 > hide sel atoms
    7595 
    7596 > show sel cartoons
    7597 
    7598 > show #21 models
    7599 
    7600 > select subtract #20
    7601 
    7602 Nothing selected 
    7603 
    7604 > hide #!20 models
    7605 
    7606 > show #!20 models
    7607 
    7608 > close #21
    7609 
    7610 > select add #20
    7611 
    7612 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7613 
    7614 > ui tool show Contacts
    7615 
    7616 > contacts ignoreHiddenModels true select true color #a46c8a reveal true
    7617 
    7618 2235 contacts 
    7619 
    7620 > contacts intraModel false ignoreHiddenModels true select true color #a46c8a
    7621 > reveal true
    7622 
    7623 No contacts 
    7624 
    7625 > contacts intraModel false ignoreHiddenModels true select true color #a46c8a
    7626 > reveal true
    7627 
    7628 No contacts 
    7629 
    7630 > contacts ignoreHiddenModels true
    7631 
    7632 2235 contacts 
    7633 
    7634 > hide #21 models
    7635 
    7636 > select add #20
    7637 
    7638 5086 atoms, 5183 bonds, 2239 pseudobonds, 642 residues, 3 models selected 
    7639 
    7640 > hide sel atoms
    7641 
    7642 > show #21 models
    7643 
    7644 > hide #!20 models
    7645 
    7646 > close #21
    7647 
    7648 > show #!20 models
    7649 
    7650 > ui tool show Contacts
    7651 
    7652 > contacts intraModel false ignoreHiddenModels true color #8dab8e
    7653 
    7654 No contacts 
    7655 
    7656 > contacts intraModel false ignoreHiddenModels true color #8dab8e
    7657 
    7658 No contacts 
    7659 
    7660 > contacts intraRes true intraModel false intraMol false ignoreHiddenModels
    7661 > true color #8dab8e
    7662 
    7663 No contacts 
    7664 
    7665 > contacts intraRes true intraModel false intraMol false ignoreHiddenModels
    7666 > true color #8dab8e
    7667 
    7668 No contacts 
    7669 
    7670 > contacts ignoreHiddenModels true
    7671 
    7672 2235 contacts 
    7673 
    7674 > close #21
    7675 
    7676 > ui tool show Contacts
    7677 
    7678 > contacts intraRes true intraModel false intraMol false ignoreHiddenModels
    7679 > true
    7680 
    7681 No contacts 
    7682 
    7683 > contacts intraRes true intraModel false intraMol false ignoreHiddenModels
    7684 > true
    7685 
    7686 No contacts 
    7687 
    7688 > hide #21 models
    7689 
    7690 > show #21 models
    7691 
    7692 > close #21
    7693 
    7694 > contacts interModel false intraMol false ignoreHiddenModels true
    7695 
    7696 339 contacts 
    7697 
    7698 > close #21
    7699 
    7700 > ui tool show Distances
    7701 
    7702 > ui tool show Contacts
    7703 
    7704 > contacts interModel false intraModel false ignoreHiddenModels true
    7705 
    7706 No contacts 
    7707 
    7708 > contacts interModel false intraModel false ignoreHiddenModels true
    7709 
    7710 No contacts 
    7711 
    7712 > close #21
    7713 
    7714 > ui tool show Contacts
    7715 
    7716 > contacts intraModel false intraMol false ignoreHiddenModels true
    7717 
    7718 No contacts 
    7719 
    7720 > hide #!20 models
    7721 
    7722 > show #!20 models
    7723 
    7724 > hide #21 models
    7725 
    7726 > show #21 models
    7727 
    7728 > hide #21 models
    7729 
    7730 > select subtract #21
    7731 
    7732 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7733 
    7734 > show #!19 models
    7735 
    7736 > hide #!19 models
    7737 
    7738 > combine #20
    7739 
    7740 > hide #!20 models
    7741 
    7742 > select subtract #20
    7743 
    7744 Nothing selected 
    7745 
    7746 > select subtract #21
    7747 
    7748 Nothing selected 
    7749 
    7750 > select #20/C-D:99
    7751 
    7752 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7753 
    7754 > select #20/C-D:99
    7755 
    7756 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7757 
    7758 > show #!22 atoms
    7759 
    7760 > style #!22 stick
    7761 
    7762 Changed 5086 atom styles 
    7763 
    7764 > undo
    7765 
    7766 [Repeated 1 time(s)]
    7767 
    7768 > select subtract #21
    7769 
    7770 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7771 
    7772 > select add #20
    7773 
    7774 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7775 
    7776 > select subtract #20
    7777 
    7778 Nothing selected 
    7779 
    7780 > select subtract #21
    7781 
    7782 Nothing selected 
    7783 
    7784 > select add #21
    7785 
    7786 Nothing selected 
    7787 
    7788 > select subtract #21
    7789 
    7790 Nothing selected 
    7791 
    7792 > select #20/C-D:99
    7793 
    7794 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7795 
    7796 > select #20/C-D:99
    7797 
    7798 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7799 
    7800 > select subtract #21
    7801 
    7802 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7803 
    7804 > select add #20
    7805 
    7806 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7807 
    7808 > select subtract #20
    7809 
    7810 Nothing selected 
    7811 
    7812 > select subtract #21
    7813 
    7814 Nothing selected 
    7815 
    7816 > close #21
    7817 
    7818 Alignment identifier is 1 
    7819 Alignment identifier is 2 
    7820 Alignment identifier is 3 
    7821 Alignment identifier is 11/b 
    7822 Alignment identifier is 4 
    7823 Alignment identifier is 5 
    7824 
    7825 > select add #22
    7826 
    7827 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    7828 Alignment identifier is 1 
    7829 Alignment identifier is 22/W 
    7830 
    7831 > select #22/C-D:99
    7832 
    7833 8 atoms, 6 bonds, 2 residues, 1 model selected 
    7834 
    7835 > show sel atoms
    7836 
    7837 > style sel stick
    7838 
    7839 Changed 8 atom styles 
    7840 
    7841 > color sel byelement
    7842 
    7843 > select #22/C-D:101
    7844 
    7845 22 atoms, 22 bonds, 2 residues, 1 model selected 
    7846 
    7847 > select #22/C-D:101
    7848 
    7849 22 atoms, 22 bonds, 2 residues, 1 model selected 
    7850 
    7851 > show sel atoms
    7852 
    7853 > style sel stick
    7854 
    7855 Changed 22 atom styles 
    7856 
    7857 > color sel byelement
    7858 
    7859 > select #22/C-D:102-103
    7860 
    7861 38 atoms, 36 bonds, 4 residues, 1 model selected 
    7862 
    7863 > select #22/C-D:102-104
    7864 
    7865 48 atoms, 46 bonds, 6 residues, 1 model selected 
    7866 
    7867 > show sel atoms
    7868 
    7869 > style sel stick
    7870 
    7871 Changed 48 atom styles 
    7872 
    7873 > color sel byhetero
    7874 
    7875 > color sel bynucleotide
    7876 
    7877 > color sel byelement
    7878 
    7879 > select #22/C-D:101
    7880 
    7881 22 atoms, 22 bonds, 2 residues, 1 model selected 
    7882 
    7883 > select #22/C-D:101-104
    7884 
    7885 70 atoms, 70 bonds, 8 residues, 1 model selected 
    7886 
    7887 > color sel byhetero
    7888 
    7889 [Repeated 1 time(s)]
    7890 
    7891 > undo
    7892 
    7893 [Repeated 9 time(s)]
    7894 
    7895 > select #22/C-D:100-101
    7896 
    7897 36 atoms, 36 bonds, 4 residues, 1 model selected 
    7898 
    7899 > select #22/C-D:100-103
    7900 
    7901 74 atoms, 74 bonds, 8 residues, 1 model selected 
    7902 
    7903 > select #22/C-D:103
    7904 
    7905 22 atoms, 20 bonds, 2 residues, 1 model selected 
    7906 
    7907 > select #22/C-D:103
    7908 
    7909 22 atoms, 20 bonds, 2 residues, 1 model selected 
    7910 
    7911 > select #22/C-D:101
    7912 
    7913 22 atoms, 22 bonds, 2 residues, 1 model selected 
    7914 
    7915 > select #22/C-D:101-103
    7916 
    7917 60 atoms, 60 bonds, 6 residues, 1 model selected 
    7918 
    7919 > select #22/C-D:104
    7920 
    7921 10 atoms, 8 bonds, 2 residues, 1 model selected 
    7922 
    7923 > select #22/C-D:101-104
    7924 
    7925 70 atoms, 70 bonds, 8 residues, 1 model selected 
    7926 
    7927 > show sel atoms
    7928 
    7929 > style sel stick
    7930 
    7931 Changed 70 atom styles 
    7932 
    7933 > color sel byhetero
    7934 
    7935 > ui mousemode right select
    7936 
    7937 > select #22/D:101
    7938 
    7939 11 atoms, 11 bonds, 1 residue, 1 model selected 
    7940 
    7941 > color sel #482c3dff
    7942 
    7943 > color sel byhetero
    7944 
    7945 > select clear
    7946 
    7947 > select #22/C-D:108
    7948 
    7949 16 atoms, 14 bonds, 2 residues, 1 model selected 
    7950 
    7951 > select #22/C-D:108
    7952 
    7953 16 atoms, 14 bonds, 2 residues, 1 model selected 
    7954 
    7955 > show sel atoms
    7956 
    7957 > style sel stick
    7958 
    7959 Changed 16 atom styles 
    7960 
    7961 > color sel byhetero
    7962 
    7963 [Repeated 1 time(s)]
    7964 
    7965 > select
    7966 > #22/C-D:41-43,49-58,63-67,71-78,82-95,104-113,122-128,148-159,163-165,183-193,197-203,212-230,247-251,255-279,309-312
    7967 
    7968 2284 atoms, 2284 bonds, 286 residues, 1 model selected 
    7969 
    7970 > select #22/C-D:111
    7971 
    7972 22 atoms, 20 bonds, 2 residues, 1 model selected 
    7973 
    7974 > select #22/C-D:111
    7975 
    7976 22 atoms, 20 bonds, 2 residues, 1 model selected 
    7977 
    7978 > show sel atoms
    7979 
    7980 > style sel stick
    7981 
    7982 Changed 22 atom styles 
    7983 
    7984 > color sel byhetero
    7985 
    7986 > select #22/C-D:133
    7987 
    7988 18 atoms, 16 bonds, 2 residues, 1 model selected 
    7989 
    7990 > select #22/C-D:133
    7991 
    7992 18 atoms, 16 bonds, 2 residues, 1 model selected 
    7993 
    7994 > style sel stick
    7995 
    7996 Changed 18 atom styles 
    7997 
    7998 > color sel byhetero
    7999 
    8000 > show sel atoms
    8001 
    8002 > select #22/C-D:182
    8003 
    8004 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8005 
    8006 > select #22/C-D:182
    8007 
    8008 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8009 
    8010 > show sel atoms
    8011 
    8012 > style sel stick
    8013 
    8014 Changed 22 atom styles 
    8015 
    8016 > style sel stick
    8017 
    8018 Changed 22 atom styles 
    8019 
    8020 > color sel byhetero
    8021 
    8022 > select #22/C-D:336
    8023 
    8024 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8025 
    8026 > select #22/C-D:336
    8027 
    8028 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8029 
    8030 > show sel atoms
    8031 
    8032 > style sel stick
    8033 
    8034 Changed 20 atom styles 
    8035 
    8036 > color sel byhetero
    8037 
    8038 > select #22/D:135
    8039 
    8040 9 atoms, 8 bonds, 1 residue, 1 model selected 
    8041 
    8042 > select #22/C-D:211
    8043 
    8044 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8045 
    8046 > select #22/C-D:211
    8047 
    8048 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8049 
    8050 > select #22/C-D:201
    8051 
    8052 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8053 
    8054 > select #22/C-D:201-202
    8055 
    8056 34 atoms, 32 bonds, 4 residues, 1 model selected 
    8057 
    8058 > show sel atoms
    8059 
    8060 > style sel stick
    8061 
    8062 Changed 34 atom styles 
    8063 
    8064 > color sel byhetero
    8065 
    8066 > select #22/C-D:204
    8067 
    8068 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8069 
    8070 > select #22/C-D:204-206
    8071 
    8072 54 atoms, 54 bonds, 6 residues, 1 model selected 
    8073 
    8074 > show sel atoms
    8075 
    8076 > style sel stick
    8077 
    8078 Changed 54 atom styles 
    8079 
    8080 > color sel byhetero
    8081 
    8082 > select #22/C-D:214
    8083 
    8084 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8085 
    8086 > select #22/C-D:214
    8087 
    8088 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8089 
    8090 > show sel atoms
    8091 
    8092 > style sel stick
    8093 
    8094 Changed 20 atom styles 
    8095 
    8096 > color sel byhetero
    8097 
    8098 > select clear
    8099 
    8100 > select #22/D:98
    8101 
    8102 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8103 
    8104 > select #22/D:99
    8105 
    8106 4 atoms, 3 bonds, 1 residue, 1 model selected 
    8107 
    8108 > show sel atoms
    8109 
    8110 > select #22/D:98
    8111 
    8112 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8113 
    8114 > show sel atoms
    8115 
    8116 > style sel stick
    8117 
    8118 Changed 8 atom styles 
    8119 
    8120 > color sel byhetero
    8121 
    8122 [Repeated 1 time(s)]
    8123 
    8124 > select #22/D:93
    8125 
    8126 11 atoms, 10 bonds, 1 residue, 1 model selected 
    8127 
    8128 > show sel atoms
    8129 
    8130 > style sel stick
    8131 
    8132 Changed 11 atom styles 
    8133 
    8134 > color sel byhetero
    8135 
    8136 > select up
    8137 
    8138 2 atoms, 1 bond, 1 residue, 1 model selected 
    8139 
    8140 > hide sel cartoons
    8141 
    8142 > show sel cartoons
    8143 
    8144 > hide sel atoms
    8145 
    8146 > select #22/C-D:263
    8147 
    8148 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8149 
    8150 > select #22/C-D:263
    8151 
    8152 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8153 
    8154 > show sel atoms
    8155 
    8156 > style sel stick
    8157 
    8158 Changed 18 atom styles 
    8159 
    8160 > color sel byhetero
    8161 
    8162 > select #22/C:254
    8163 
    8164 4 atoms, 3 bonds, 1 residue, 1 model selected 
    8165 
    8166 > show sel atoms
    8167 
    8168 [Repeated 1 time(s)]
    8169 
    8170 > style sel stick
    8171 
    8172 Changed 4 atom styles 
    8173 
    8174 > color sel byhetero
    8175 
    8176 > select #22/C-D:270
    8177 
    8178 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8179 
    8180 > select #22/C-D:270
    8181 
    8182 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8183 
    8184 > show sel atoms
    8185 
    8186 > show sel cartoons
    8187 
    8188 [Repeated 1 time(s)]
    8189 
    8190 > style sel stick
    8191 
    8192 Changed 10 atom styles 
    8193 
    8194 > color sel byhetero
    8195 
    8196 > select #22/C-D:288
    8197 
    8198 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8199 
    8200 > select #22/C-D:288
    8201 
    8202 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8203 
    8204 > show sel atoms
    8205 
    8206 > style sel stick
    8207 
    8208 Changed 18 atom styles 
    8209 
    8210 > color sel byhetero
    8211 
    8212 > select #22/C-D:311
    8213 
    8214 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8215 
    8216 > select #22/C-D:311
    8217 
    8218 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8219 
    8220 > show sel atoms
    8221 
    8222 > style sel stick
    8223 
    8224 Changed 20 atom styles 
    8225 
    8226 > color sel byhetero
    8227 
    8228 > select #22/C-D:316
    8229 
    8230 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8231 
    8232 > select #22/C-D:316
    8233 
    8234 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8235 
    8236 > show sel atoms
    8237 
    8238 > style sel stick
    8239 
    8240 Changed 22 atom styles 
    8241 
    8242 > color sel byhetero
    8243 
    8244 > select #22/C-D:144
    8245 
    8246 22 atoms, 22 bonds, 2 residues, 1 model selected 
    8247 
    8248 > select #22/C-D:144
    8249 
    8250 22 atoms, 22 bonds, 2 residues, 1 model selected 
    8251 
    8252 > show sel atoms
    8253 
    8254 > style sel stick
    8255 
    8256 Changed 22 atom styles 
    8257 
    8258 > color sel byhetero
    8259 
    8260 [Repeated 1 time(s)]
    8261 
    8262 > select #22/C-D:99
    8263 
    8264 8 atoms, 6 bonds, 2 residues, 1 model selected 
    8265 
    8266 > select #22/C-D:99
    8267 
    8268 8 atoms, 6 bonds, 2 residues, 1 model selected 
    8269 
    8270 > select #22/D:98
    8271 
    8272 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8273 
    8274 > show sel atoms
    8275 
    8276 > hide sel atoms
    8277 
    8278 > select #22/D:93
    8279 
    8280 11 atoms, 10 bonds, 1 residue, 1 model selected 
    8281 
    8282 > select #22/D:98
    8283 
    8284 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8285 
    8286 > select #22/D:99
    8287 
    8288 4 atoms, 3 bonds, 1 residue, 1 model selected 
    8289 
    8290 > show sel atoms
    8291 
    8292 > color sel byelement
    8293 
    8294 > select #22/C-D:218
    8295 
    8296 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8297 
    8298 > select #22/C-D:218
    8299 
    8300 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8301 
    8302 > show sel atoms
    8303 
    8304 > style sel stick
    8305 
    8306 Changed 16 atom styles 
    8307 
    8308 > color sel byhetero
    8309 
    8310 [Repeated 1 time(s)]
    8311 
    8312 > select #22/D:102
    8313 
    8314 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8315 
    8316 > select #22/C-D:108
    8317 
    8318 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8319 
    8320 > select #22/C-D:108
    8321 
    8322 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8323 
    8324 > select #22/C:183
    8325 
    8326 7 atoms, 7 bonds, 1 residue, 1 model selected 
    8327 
    8328 > show sel atoms
    8329 
    8330 > style sel stick
    8331 
    8332 Changed 7 atom styles 
    8333 
    8334 > color sel byhetero
    8335 
    8336 > select #22/C-D:111
    8337 
    8338 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8339 
    8340 > select #22/C-D:111
    8341 
    8342 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8343 
    8344 > select #22/C-D:201
    8345 
    8346 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8347 
    8348 > select #22/C-D:201
    8349 
    8350 16 atoms, 14 bonds, 2 residues, 1 model selected 
    8351 
    8352 > select #22/C-D:263
    8353 
    8354 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8355 
    8356 > select #22/C-D:263
    8357 
    8358 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8359 
    8360 > select #22/C-D:266
    8361 
    8362 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8363 
    8364 > select #22/C-D:266
    8365 
    8366 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8367 
    8368 > show sel atoms
    8369 
    8370 > style sel stick
    8371 
    8372 Changed 10 atom styles 
    8373 
    8374 > color sel byhetero
    8375 
    8376 > select #22/C-D:266
    8377 
    8378 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8379 
    8380 > select #22/C-D:266
    8381 
    8382 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8383 
    8384 > hide sel atoms
    8385 
    8386 > select #22/C-D:270
    8387 
    8388 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8389 
    8390 > select #22/C-D:270
    8391 
    8392 10 atoms, 8 bonds, 2 residues, 1 model selected 
    8393 
    8394 > select #22/C:250
    8395 
    8396 6 atoms, 5 bonds, 1 residue, 1 model selected 
    8397 
    8398 > show sel atoms
    8399 
    8400 > style sel stick
    8401 
    8402 Changed 6 atom styles 
    8403 
    8404 > color sel byhetero
    8405 
    8406 > select #22/C-D:288
    8407 
    8408 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8409 
    8410 > select #22/C-D:288
    8411 
    8412 18 atoms, 16 bonds, 2 residues, 1 model selected 
    8413 
    8414 > select #22/C-D:311
    8415 
    8416 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8417 
    8418 > select #22/C-D:311
    8419 
    8420 20 atoms, 20 bonds, 2 residues, 1 model selected 
    8421 
    8422 > select #22/C-D:316
    8423 
    8424 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8425 
    8426 > select #22/C-D:316
    8427 
    8428 22 atoms, 20 bonds, 2 residues, 1 model selected 
    8429 
    8430 > select #22/W:21
    8431 
    8432 21 atoms, 23 bonds, 1 residue, 1 model selected 
    8433 
    8434 > select up
    8435 
    8436 168 atoms, 191 bonds, 8 residues, 1 model selected 
    8437 
    8438 > show sel atoms
    8439 
    8440 > rename #22 figG
    8441 
    8442 > hide #!22 models
    8443 
    8444 > show #!19 models
    8445 
    8446 > hide #!19 models
    8447 
    8448 > show #!18 models
    8449 
    8450 > show #!19 models
    8451 
    8452 > hide #!18 models
    8453 
    8454 > show #!16 models
    8455 
    8456 > hide #!16 models
    8457 
    8458 > show #!1 models
    8459 
    8460 > hide #!1 models
    8461 
    8462 > show #!5 models
    8463 
    8464 > hide #!5 models
    8465 
    8466 > show #!8 models
    8467 
    8468 > hide #!8 models
    8469 
    8470 > hide #!19 models
    8471 
    8472 > show #!22 models
    8473 
    8474 > select clear
    8475 
    8476 > select #22/D:92
    8477 
    8478 5 atoms, 4 bonds, 1 residue, 1 model selected 
    8479 
    8480 > select up
    8481 
    8482 100 atoms, 99 bonds, 14 residues, 1 model selected 
    8483 
    8484 > select up
    8485 
    8486 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8487 
    8488 > select down
    8489 
    8490 100 atoms, 99 bonds, 14 residues, 1 model selected 
    8491 
    8492 > select #22/D:72
    8493 
    8494 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8495 
    8496 > select up
    8497 
    8498 62 atoms, 62 bonds, 8 residues, 1 model selected 
    8499 
    8500 > select up
    8501 
    8502 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8503 
    8504 > select down
    8505 
    8506 62 atoms, 62 bonds, 8 residues, 1 model selected 
    8507 
    8508 > hide sel cartoons
    8509 
    8510 > select #22/D:67
    8511 
    8512 5 atoms, 4 bonds, 1 residue, 1 model selected 
    8513 
    8514 > select up
    8515 
    8516 35 atoms, 34 bonds, 5 residues, 1 model selected 
    8517 
    8518 > select up
    8519 
    8520 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8521 
    8522 > select down
    8523 
    8524 35 atoms, 34 bonds, 5 residues, 1 model selected 
    8525 
    8526 > hide sel cartoons
    8527 
    8528 Drag select of 3 residues 
    8529 
    8530 > hide sel cartoons
    8531 
    8532 > select #22/D:57
    8533 
    8534 9 atoms, 8 bonds, 1 residue, 1 model selected 
    8535 
    8536 > select up
    8537 
    8538 25 atoms, 24 bonds, 3 residues, 1 model selected 
    8539 
    8540 > select up
    8541 
    8542 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8543 
    8544 > select down
    8545 
    8546 25 atoms, 24 bonds, 3 residues, 1 model selected 
    8547 
    8548 > select clear
    8549 
    8550 Drag select of 26 residues 
    8551 
    8552 > hide sel cartoons
    8553 
    8554 Drag select of 14 residues 
    8555 
    8556 > hide sel cartoons
    8557 
    8558 > select #22/D:115
    8559 
    8560 4 atoms, 3 bonds, 1 residue, 1 model selected 
    8561 
    8562 > hide sel cartoons
    8563 
    8564 > select #22/D:116
    8565 
    8566 11 atoms, 10 bonds, 1 residue, 1 model selected 
    8567 
    8568 > hide sel cartoons
    8569 
    8570 > select #22/D:173
    8571 
    8572 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8573 
    8574 > select #22/D:117
    8575 
    8576 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8577 
    8578 > select #22/D:118
    8579 
    8580 6 atoms, 5 bonds, 1 residue, 1 model selected 
    8581 
    8582 > select add #22/D:117
    8583 
    8584 14 atoms, 12 bonds, 2 residues, 1 model selected 
    8585 
    8586 > select add #22/D:119
    8587 
    8588 21 atoms, 18 bonds, 3 residues, 1 model selected 
    8589 
    8590 > select add #22/D:120
    8591 
    8592 25 atoms, 21 bonds, 4 residues, 1 model selected 
    8593 
    8594 > select add #22/D:122
    8595 
    8596 34 atoms, 29 bonds, 5 residues, 1 model selected 
    8597 
    8598 > select add #22/D:123
    8599 
    8600 40 atoms, 34 bonds, 6 residues, 1 model selected 
    8601 
    8602 > select add #22/D:121
    8603 
    8604 46 atoms, 39 bonds, 7 residues, 1 model selected 
    8605 
    8606 > select add #22/D:124
    8607 
    8608 54 atoms, 46 bonds, 8 residues, 1 model selected 
    8609 
    8610 > select add #22/D:126
    8611 
    8612 63 atoms, 54 bonds, 9 residues, 1 model selected 
    8613 
    8614 > select add #22/D:125
    8615 
    8616 71 atoms, 61 bonds, 10 residues, 1 model selected 
    8617 
    8618 > select add #22/D:127
    8619 
    8620 79 atoms, 68 bonds, 11 residues, 1 model selected 
    8621 
    8622 > select add #22/D:128
    8623 
    8624 87 atoms, 75 bonds, 12 residues, 1 model selected 
    8625 
    8626 > select add #22/D:129
    8627 
    8628 91 atoms, 78 bonds, 13 residues, 1 model selected 
    8629 
    8630 > select add #22/D:130
    8631 
    8632 95 atoms, 81 bonds, 14 residues, 1 model selected 
    8633 
    8634 > select add #22/D:131
    8635 
    8636 99 atoms, 84 bonds, 15 residues, 1 model selected 
    8637 
    8638 > select add #22/D:132
    8639 
    8640 107 atoms, 91 bonds, 16 residues, 1 model selected 
    8641 
    8642 > hide sel cartoons
    8643 
    8644 > select #22/D:134
    8645 
    8646 7 atoms, 6 bonds, 1 residue, 1 model selected 
    8647 Drag select of 1 residues 
    8648 
    8649 > select add #22/D:136
    8650 
    8651 21 atoms, 10 bonds, 3 residues, 1 model selected 
    8652 
    8653 > select add #22/D:138
    8654 
    8655 28 atoms, 16 bonds, 4 residues, 1 model selected 
    8656 
    8657 > select add #22/D:139
    8658 
    8659 37 atoms, 24 bonds, 5 residues, 1 model selected 
    8660 
    8661 > select add #22/D:137
    8662 
    8663 45 atoms, 31 bonds, 6 residues, 1 model selected 
    8664 Drag select of 2 residues 
    8665 
    8666 > select add #22/D:141
    8667 
    8668 71 atoms, 42 bonds, 9 residues, 1 model selected 
    8669 Drag select of 1 residues 
    8670 
    8671 > select add #22/D:142
    8672 
    8673 84 atoms, 45 bonds, 11 residues, 1 model selected 
    8674 
    8675 > hide sel cartoons
    8676 
    8677 > select clear
    8678 
    8679 > select #22/D:144
    8680 
    8681 11 atoms, 11 bonds, 1 residue, 1 model selected 
    8682 
    8683 > select add #22/D:145
    8684 
    8685 15 atoms, 14 bonds, 2 residues, 1 model selected 
    8686 
    8687 > select add #22/D:146
    8688 
    8689 21 atoms, 19 bonds, 3 residues, 1 model selected 
    8690 
    8691 > select add #22/D:147
    8692 
    8693 25 atoms, 22 bonds, 4 residues, 1 model selected 
    8694 
    8695 > select add #22/D:149
    8696 
    8697 32 atoms, 28 bonds, 5 residues, 1 model selected 
    8698 
    8699 > select add #22/D:148
    8700 
    8701 41 atoms, 36 bonds, 6 residues, 1 model selected 
    8702 
    8703 > select add #22/D:150
    8704 
    8705 50 atoms, 44 bonds, 7 residues, 1 model selected 
    8706 
    8707 > hide sel cartoons
    8708 
    8709 > select add #22/D:152
    8710 
    8711 55 atoms, 48 bonds, 8 residues, 1 model selected 
    8712 
    8713 > select add #22/D:153
    8714 
    8715 65 atoms, 58 bonds, 9 residues, 1 model selected 
    8716 
    8717 > select add #22/D:151
    8718 
    8719 73 atoms, 65 bonds, 10 residues, 1 model selected 
    8720 
    8721 > select add #22/D:154
    8722 
    8723 80 atoms, 71 bonds, 11 residues, 1 model selected 
    8724 
    8725 > select add #22/D:156
    8726 
    8727 85 atoms, 75 bonds, 12 residues, 1 model selected 
    8728 
    8729 > select add #22/D:157
    8730 
    8731 92 atoms, 81 bonds, 13 residues, 1 model selected 
    8732 
    8733 > select add #22/D:158
    8734 
    8735 100 atoms, 88 bonds, 14 residues, 1 model selected 
    8736 Drag select of 1 residues 
    8737 [Repeated 1 time(s)]
    8738 
    8739 > select add #22/D:167
    8740 
    8741 121 atoms, 91 bonds, 17 residues, 1 model selected 
    8742 
    8743 > select add #22/D:166
    8744 
    8745 125 atoms, 94 bonds, 18 residues, 1 model selected 
    8746 
    8747 > select add #22/D:165
    8748 
    8749 134 atoms, 102 bonds, 19 residues, 1 model selected 
    8750 
    8751 > select add #22/D:163
    8752 
    8753 141 atoms, 109 bonds, 20 residues, 1 model selected 
    8754 
    8755 > select add #22/D:169
    8756 
    8757 149 atoms, 116 bonds, 21 residues, 1 model selected 
    8758 
    8759 > select add #22/D:164
    8760 
    8761 158 atoms, 124 bonds, 22 residues, 1 model selected 
    8762 
    8763 > hide sel cartoons
    8764 
    8765 > select add #22/D:155
    8766 
    8767 166 atoms, 131 bonds, 23 residues, 1 model selected 
    8768 
    8769 > select add #22/D:159
    8770 
    8771 173 atoms, 137 bonds, 24 residues, 1 model selected 
    8772 
    8773 > select add #22/D:162
    8774 
    8775 180 atoms, 144 bonds, 25 residues, 1 model selected 
    8776 
    8777 > select add #22/D:161
    8778 
    8779 188 atoms, 151 bonds, 26 residues, 1 model selected 
    8780 
    8781 > hide sel cartoons
    8782 
    8783 > hide sel atoms
    8784 
    8785 Drag select of 49 atoms, 73 residues, 43 bonds 
    8786 
    8787 > select clear
    8788 
    8789 Drag select of 9 residues 
    8790 
    8791 > select clear
    8792 
    8793 Drag select of 40 atoms, 40 residues, 34 bonds 
    8794 
    8795 > hide sel cartoons
    8796 
    8797 > hide sel atoms
    8798 
    8799 Drag select of 15 residues 
    8800 Drag select of 12 atoms, 17 residues, 10 bonds 
    8801 Drag select of 12 atoms, 22 residues, 10 bonds 
    8802 
    8803 > select clear
    8804 
    8805 Drag select of 12 atoms, 16 residues, 10 bonds 
    8806 
    8807 > select up
    8808 
    8809 141 atoms, 140 bonds, 17 residues, 1 model selected 
    8810 
    8811 > select up
    8812 
    8813 163 atoms, 164 bonds, 20 residues, 1 model selected 
    8814 
    8815 > hide sel cartoons
    8816 
    8817 > hide sel atoms
    8818 
    8819 Drag select of 12 residues 
    8820 
    8821 > select up
    8822 
    8823 130 atoms, 129 bonds, 18 residues, 1 model selected 
    8824 
    8825 > select up
    8826 
    8827 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8828 
    8829 > select down
    8830 
    8831 130 atoms, 129 bonds, 18 residues, 1 model selected 
    8832 
    8833 > hide sel cartoons
    8834 
    8835 > select #22/D:248
    8836 
    8837 11 atoms, 11 bonds, 1 residue, 1 model selected 
    8838 
    8839 > select up
    8840 
    8841 47 atoms, 48 bonds, 5 residues, 1 model selected 
    8842 
    8843 > select up
    8844 
    8845 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    8846 
    8847 > select down
    8848 
    8849 47 atoms, 48 bonds, 5 residues, 1 model selected 
    8850 
    8851 > hide sel cartoons
    8852 
    8853 > select clear
    8854 
    8855 [Repeated 1 time(s)]
    8856 
    8857 > select #22/D:252
    8858 
    8859 12 atoms, 12 bonds, 1 residue, 1 model selected 
    8860 
    8861 > hide sel cartoons
    8862 
    8863 > select #22/D:242
    8864 
    8865 8 atoms, 7 bonds, 1 residue, 1 model selected 
    8866 
    8867 > select add #22/D:243
    8868 
    8869 14 atoms, 12 bonds, 2 residues, 1 model selected 
    8870 
    8871 > select add #22/D:244
    8872 
    8873 22 atoms, 19 bonds, 3 residues, 1 model selected 
    8874 
    8875 > select add #22/D:245
    8876 
    8877 29 atoms, 25 bonds, 4 residues, 1 model selected 
    8878 
    8879 > select add #22/D:246
    8880 
    8881 35 atoms, 30 bonds, 5 residues, 1 model selected 
    8882 
    8883 > hide sel cartoons
    8884 
    8885 > select add #22/D:279
    8886 
    8887 47 atoms, 42 bonds, 6 residues, 1 model selected 
    8888 
    8889 > select add #22/D:281
    8890 
    8891 55 atoms, 49 bonds, 7 residues, 1 model selected 
    8892 
    8893 > select add #22/D:282
    8894 
    8895 60 atoms, 53 bonds, 8 residues, 1 model selected 
    8896 
    8897 > select add #22/D:280
    8898 
    8899 69 atoms, 61 bonds, 9 residues, 1 model selected 
    8900 
    8901 > select add #22/D:283
    8902 
    8903 76 atoms, 67 bonds, 10 residues, 1 model selected 
    8904 
    8905 > select add #22/D:284
    8906 
    8907 87 atoms, 78 bonds, 11 residues, 1 model selected 
    8908 
    8909 > select add #22/D:285
    8910 
    8911 94 atoms, 84 bonds, 12 residues, 1 model selected 
    8912 
    8913 > select add #22/D:286
    8914 
    8915 101 atoms, 90 bonds, 13 residues, 1 model selected 
    8916 
    8917 > select add #22/D:287
    8918 
    8919 109 atoms, 97 bonds, 14 residues, 1 model selected 
    8920 
    8921 > select add #22/D:289
    8922 
    8923 116 atoms, 104 bonds, 15 residues, 1 model selected 
    8924 
    8925 > select add #22/D:291
    8926 
    8927 121 atoms, 108 bonds, 16 residues, 1 model selected 
    8928 
    8929 > select add #22/D:290
    8930 
    8931 130 atoms, 116 bonds, 17 residues, 1 model selected 
    8932 
    8933 > select up
    8934 
    8935 132 atoms, 130 bonds, 18 residues, 1 model selected 
    8936 
    8937 > select up
    8938 
    8939 139 atoms, 139 bonds, 18 residues, 1 model selected 
    8940 
    8941 > select up
    8942 
    8943 310 atoms, 312 bonds, 39 residues, 1 model selected 
    8944 
    8945 > select down
    8946 
    8947 139 atoms, 139 bonds, 18 residues, 1 model selected 
    8948 
    8949 > hide sel cartoons
    8950 
    8951 > hide sel atoms
    8952 
    8953 > select clear
    8954 
    8955 > select #22/D:307
    8956 
    8957 10 atoms, 10 bonds, 1 residue, 1 model selected 
    8958 
    8959 > select add #22/D:304
    8960 
    8961 18 atoms, 17 bonds, 2 residues, 1 model selected 
    8962 
    8963 > select add #22/C:301
    8964 
    8965 25 atoms, 23 bonds, 3 residues, 1 model selected 
    8966 
    8967 > select add #22/D:305
    8968 
    8969 29 atoms, 26 bonds, 4 residues, 1 model selected 
    8970 
    8971 > select subtract #22/D:305
    8972 
    8973 25 atoms, 23 bonds, 3 residues, 1 model selected 
    8974 
    8975 > select subtract #22/C:301
    8976 
    8977 18 atoms, 17 bonds, 2 residues, 1 model selected 
    8978 
    8979 > select add #22/D:305
    8980 
    8981 22 atoms, 20 bonds, 3 residues, 1 model selected 
    8982 
    8983 > select add #22/D:303
    8984 
    8985 29 atoms, 27 bonds, 4 residues, 1 model selected 
    8986 
    8987 > select add #22/D:301
    8988 
    8989 36 atoms, 33 bonds, 5 residues, 1 model selected 
    8990 
    8991 > select add #22/D:302
    8992 
    8993 47 atoms, 43 bonds, 6 residues, 1 model selected 
    8994 
    8995 > select add #22/D:299
    8996 
    8997 55 atoms, 50 bonds, 7 residues, 1 model selected 
    8998 
    8999 > select add #22/D:300
    9000 
    9001 62 atoms, 57 bonds, 8 residues, 1 model selected 
    9002 
    9003 > select add #22/D:295
    9004 
    9005 67 atoms, 61 bonds, 9 residues, 1 model selected 
    9006 
    9007 > select subtract #22/D:295
    9008 
    9009 62 atoms, 57 bonds, 8 residues, 1 model selected 
    9010 
    9011 > select add #22/D:294
    9012 
    9013 70 atoms, 64 bonds, 9 residues, 1 model selected 
    9014 
    9015 > select add #22/D:292
    9016 
    9017 81 atoms, 74 bonds, 10 residues, 1 model selected 
    9018 
    9019 > select add #22/D:293
    9020 
    9021 88 atoms, 81 bonds, 11 residues, 1 model selected 
    9022 
    9023 > select add #22/D:295
    9024 
    9025 93 atoms, 85 bonds, 12 residues, 1 model selected 
    9026 
    9027 > hide sel cartoons
    9028 
    9029 > select add #22/D:306
    9030 
    9031 97 atoms, 88 bonds, 13 residues, 1 model selected 
    9032 
    9033 > hide sel cartoons
    9034 
    9035 > select #22/C:139
    9036 
    9037 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9038 Drag select of 21 residues 
    9039 
    9040 > select up
    9041 
    9042 225 atoms, 225 bonds, 28 residues, 1 model selected 
    9043 
    9044 > hide sel cartoons
    9045 
    9046 > select #22/D:340
    9047 
    9048 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9049 
    9050 > select add #22/D:339
    9051 
    9052 13 atoms, 11 bonds, 2 residues, 1 model selected 
    9053 
    9054 > select add #22/D:337
    9055 
    9056 21 atoms, 18 bonds, 3 residues, 1 model selected 
    9057 
    9058 > select add #22/D:338
    9059 
    9060 28 atoms, 25 bonds, 4 residues, 1 model selected 
    9061 
    9062 > select add #22/D:332
    9063 
    9064 36 atoms, 32 bonds, 5 residues, 1 model selected 
    9065 
    9066 > select add #22/D:333
    9067 
    9068 44 atoms, 39 bonds, 6 residues, 1 model selected 
    9069 
    9070 > hide sel cartoons
    9071 
    9072 > select add #22/D:277
    9073 
    9074 52 atoms, 46 bonds, 7 residues, 1 model selected 
    9075 
    9076 > select add #22/D:278
    9077 
    9078 60 atoms, 53 bonds, 8 residues, 1 model selected 
    9079 
    9080 > select add #22/D:276
    9081 
    9082 65 atoms, 57 bonds, 9 residues, 1 model selected 
    9083 
    9084 > select add #22/D:274
    9085 
    9086 76 atoms, 67 bonds, 10 residues, 1 model selected 
    9087 
    9088 > select add #22/D:275
    9089 
    9090 84 atoms, 74 bonds, 11 residues, 1 model selected 
    9091 
    9092 > select add #22/D:272
    9093 
    9094 92 atoms, 81 bonds, 12 residues, 1 model selected 
    9095 
    9096 > select add #22/D:273
    9097 
    9098 102 atoms, 91 bonds, 13 residues, 1 model selected 
    9099 
    9100 > hide sel cartoons
    9101 
    9102 > select add #22/D:268
    9103 
    9104 112 atoms, 101 bonds, 14 residues, 1 model selected 
    9105 
    9106 > select #22/D:260
    9107 
    9108 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9109 
    9110 > select add #22/D:258
    9111 
    9112 17 atoms, 15 bonds, 2 residues, 1 model selected 
    9113 
    9114 > select add #22/D:257
    9115 
    9116 22 atoms, 19 bonds, 3 residues, 1 model selected 
    9117 
    9118 > select add #22/D:256
    9119 
    9120 26 atoms, 22 bonds, 4 residues, 1 model selected 
    9121 
    9122 > select add #22/D:254
    9123 
    9124 30 atoms, 25 bonds, 5 residues, 1 model selected 
    9125 
    9126 > select add #22/D:259
    9127 
    9128 35 atoms, 29 bonds, 6 residues, 1 model selected 
    9129 
    9130 > hide sel cartoons
    9131 
    9132 > select add #22/D:255
    9133 
    9134 46 atoms, 39 bonds, 7 residues, 1 model selected 
    9135 
    9136 > hide sel cartoons
    9137 
    9138 > select #22/W:18
    9139 
    9140 21 atoms, 23 bonds, 1 residue, 1 model selected 
    9141 
    9142 > select up
    9143 
    9144 168 atoms, 191 bonds, 8 residues, 1 model selected 
    9145 
    9146 > select up
    9147 
    9148 5086 atoms, 5183 bonds, 642 residues, 1 model selected 
    9149 
    9150 > select down
    9151 
    9152 168 atoms, 191 bonds, 8 residues, 1 model selected 
    9153 
    9154 > hide sel atoms
    9155 
    9156 > hide sel cartoons
    9157 
    9158 Drag select of 63 residues 
    9159 
    9160 > hide sel cartoons
    9161 
    9162 Drag select of 32 atoms, 12 residues, 27 bonds 
    9163 
    9164 > hide sel cartoons
    9165 
    9166 > hide sel atoms
    9167 
    9168 Drag select of 33 residues 
    9169 
    9170 > select up
    9171 
    9172 308 atoms, 310 bonds, 39 residues, 1 model selected 
    9173 
    9174 > hide sel cartoons
    9175 
    9176 > hide sel atoms
    9177 
    9178 > select clear
    9179 
    9180 > select #22/C:129
    9181 
    9182 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9183 
    9184 > select add #22/C:130
    9185 
    9186 8 atoms, 6 bonds, 2 residues, 1 model selected 
    9187 
    9188 > select add #22/C:131
    9189 
    9190 12 atoms, 9 bonds, 3 residues, 1 model selected 
    9191 
    9192 > select add #22/C:133
    9193 
    9194 21 atoms, 17 bonds, 4 residues, 1 model selected 
    9195 
    9196 > select add #22/C:132
    9197 
    9198 29 atoms, 24 bonds, 5 residues, 1 model selected 
    9199 
    9200 > select add #22/C:134
    9201 
    9202 36 atoms, 30 bonds, 6 residues, 1 model selected 
    9203 
    9204 > select add #22/C:135
    9205 
    9206 45 atoms, 38 bonds, 7 residues, 1 model selected 
    9207 
    9208 > select add #22/C:138
    9209 
    9210 52 atoms, 44 bonds, 8 residues, 1 model selected 
    9211 
    9212 > select add #22/C:137
    9213 
    9214 60 atoms, 51 bonds, 9 residues, 1 model selected 
    9215 
    9216 > select add #22/C:136
    9217 
    9218 65 atoms, 55 bonds, 10 residues, 1 model selected 
    9219 
    9220 > select add #22/C:139
    9221 
    9222 74 atoms, 63 bonds, 11 residues, 1 model selected 
    9223 
    9224 > select add #22/C:140
    9225 
    9226 81 atoms, 69 bonds, 12 residues, 1 model selected 
    9227 
    9228 > select add #22/C:141
    9229 
    9230 92 atoms, 80 bonds, 13 residues, 1 model selected 
    9231 
    9232 > hide sel cartoons
    9233 
    9234 > select add #22/C:145
    9235 
    9236 96 atoms, 83 bonds, 14 residues, 1 model selected 
    9237 
    9238 > select add #22/C:147
    9239 
    9240 100 atoms, 86 bonds, 15 residues, 1 model selected 
    9241 
    9242 > select add #22/C:146
    9243 
    9244 106 atoms, 91 bonds, 16 residues, 1 model selected 
    9245 
    9246 > select add #22/C:285
    9247 
    9248 113 atoms, 97 bonds, 17 residues, 1 model selected 
    9249 
    9250 > select subtract #22/C:285
    9251 
    9252 106 atoms, 91 bonds, 16 residues, 1 model selected 
    9253 
    9254 > select add #22/C:274
    9255 
    9256 117 atoms, 101 bonds, 17 residues, 1 model selected 
    9257 
    9258 > select add #22/C:148
    9259 
    9260 126 atoms, 109 bonds, 18 residues, 1 model selected 
    9261 
    9262 > select subtract #22/C:274
    9263 
    9264 115 atoms, 99 bonds, 17 residues, 1 model selected 
    9265 
    9266 > select add #22/C:284
    9267 
    9268 126 atoms, 110 bonds, 18 residues, 1 model selected 
    9269 
    9270 > select subtract #22/C:284
    9271 
    9272 115 atoms, 99 bonds, 17 residues, 1 model selected 
    9273 
    9274 > select add #22/C:149
    9275 
    9276 122 atoms, 105 bonds, 18 residues, 1 model selected 
    9277 
    9278 > select add #22/C:150
    9279 
    9280 131 atoms, 113 bonds, 19 residues, 1 model selected 
    9281 
    9282 > select add #22/C:152
    9283 
    9284 136 atoms, 117 bonds, 20 residues, 1 model selected 
    9285 
    9286 > select add #22/C:151
    9287 
    9288 144 atoms, 124 bonds, 21 residues, 1 model selected 
    9289 
    9290 > select add #22/C:153
    9291 
    9292 154 atoms, 134 bonds, 22 residues, 1 model selected 
    9293 
    9294 > select add #22/C:154
    9295 
    9296 161 atoms, 140 bonds, 23 residues, 1 model selected 
    9297 
    9298 > select add #22/C:156
    9299 
    9300 166 atoms, 144 bonds, 24 residues, 1 model selected 
    9301 
    9302 > select add #22/C:155
    9303 
    9304 174 atoms, 151 bonds, 25 residues, 1 model selected 
    9305 
    9306 > select add #22/C:158
    9307 
    9308 182 atoms, 158 bonds, 26 residues, 1 model selected 
    9309 
    9310 > select add #22/C:157
    9311 
    9312 189 atoms, 164 bonds, 27 residues, 1 model selected 
    9313 
    9314 > hide sel cartoons
    9315 
    9316 Drag select of 19 residues 
    9317 
    9318 > select up
    9319 
    9320 526 atoms, 531 bonds, 66 residues, 1 model selected 
    9321 
    9322 > select clear
    9323 
    9324 > select add #22/C:159
    9325 
    9326 7 atoms, 6 bonds, 1 residue, 1 model selected 
    9327 
    9328 > select add #22/C:160
    9329 
    9330 16 atoms, 14 bonds, 2 residues, 1 model selected 
    9331 
    9332 > select add #22/C:161
    9333 
    9334 24 atoms, 21 bonds, 3 residues, 1 model selected 
    9335 
    9336 > select add #22/C:162
    9337 
    9338 31 atoms, 28 bonds, 4 residues, 1 model selected 
    9339 
    9340 > select add #22/C:163
    9341 
    9342 38 atoms, 35 bonds, 5 residues, 1 model selected 
    9343 
    9344 > select add #22/C:165
    9345 
    9346 47 atoms, 43 bonds, 6 residues, 1 model selected 
    9347 
    9348 > select subtract #22/C:165
    9349 
    9350 38 atoms, 35 bonds, 5 residues, 1 model selected 
    9351 
    9352 > select add #22/C:165
    9353 
    9354 47 atoms, 43 bonds, 6 residues, 1 model selected 
    9355 
    9356 > select subtract #22/C:165
    9357 
    9358 38 atoms, 35 bonds, 5 residues, 1 model selected 
    9359 
    9360 > select add #22/C:165
    9361 
    9362 47 atoms, 43 bonds, 6 residues, 1 model selected 
    9363 
    9364 > select add #22/C:166
    9365 
    9366 51 atoms, 46 bonds, 7 residues, 1 model selected 
    9367 
    9368 > select add #22/C:167
    9369 
    9370 55 atoms, 49 bonds, 8 residues, 1 model selected 
    9371 
    9372 > select add #22/C:169
    9373 
    9374 63 atoms, 56 bonds, 9 residues, 1 model selected 
    9375 
    9376 > select add #22/C:168
    9377 
    9378 71 atoms, 63 bonds, 10 residues, 1 model selected 
    9379 
    9380 > select add #22/C:164
    9381 
    9382 80 atoms, 71 bonds, 11 residues, 1 model selected 
    9383 
    9384 > hide sel cartoons
    9385 
    9386 > select add #22/C:171
    9387 
    9388 86 atoms, 76 bonds, 12 residues, 1 model selected 
    9389 
    9390 > select add #22/C:170
    9391 
    9392 90 atoms, 79 bonds, 13 residues, 1 model selected 
    9393 
    9394 > select add #22/C:173
    9395 
    9396 98 atoms, 86 bonds, 14 residues, 1 model selected 
    9397 
    9398 > select add #22/C:172
    9399 
    9400 105 atoms, 92 bonds, 15 residues, 1 model selected 
    9401 
    9402 > select add #22/C:174
    9403 
    9404 119 atoms, 107 bonds, 16 residues, 1 model selected 
    9405 
    9406 > select add #22/C:176
    9407 
    9408 127 atoms, 114 bonds, 17 residues, 1 model selected 
    9409 
    9410 > select add #22/C:175
    9411 
    9412 135 atoms, 121 bonds, 18 residues, 1 model selected 
    9413 
    9414 > select add #22/C:177
    9415 
    9416 142 atoms, 127 bonds, 19 residues, 1 model selected 
    9417 
    9418 > select add #22/C:133@CA
    9419 
    9420 143 atoms, 127 bonds, 20 residues, 1 model selected 
    9421 
    9422 > select add #22/C:179
    9423 
    9424 151 atoms, 134 bonds, 21 residues, 1 model selected 
    9425 
    9426 > select add #22/C:178
    9427 
    9428 160 atoms, 142 bonds, 22 residues, 1 model selected 
    9429 
    9430 > select add #22/C:181
    9431 
    9432 171 atoms, 153 bonds, 23 residues, 1 model selected 
    9433 
    9434 > select clear
    9435 
    9436 > select add #22/C:181
    9437 
    9438 11 atoms, 11 bonds, 1 residue, 1 model selected 
    9439 
    9440 > select add #22/C:350
    9441 
    9442 15 atoms, 14 bonds, 2 residues, 1 model selected 
    9443 
    9444 > select subtract #22/C:350
    9445 
    9446 11 atoms, 11 bonds, 1 residue, 1 model selected 
    9447 
    9448 > select add #22/C:179
    9449 
    9450 19 atoms, 18 bonds, 2 residues, 1 model selected 
    9451 
    9452 > select add #22/C:180
    9453 
    9454 26 atoms, 24 bonds, 3 residues, 1 model selected 
    9455 
    9456 > select add #22/C:178
    9457 
    9458 35 atoms, 32 bonds, 4 residues, 1 model selected 
    9459 
    9460 > select add #22/C:177
    9461 
    9462 42 atoms, 38 bonds, 5 residues, 1 model selected 
    9463 
    9464 > select add #22/C:176
    9465 
    9466 50 atoms, 45 bonds, 6 residues, 1 model selected 
    9467 
    9468 > select add #22/C:175
    9469 
    9470 58 atoms, 52 bonds, 7 residues, 1 model selected 
    9471 
    9472 > select add #22/C:174
    9473 
    9474 72 atoms, 67 bonds, 8 residues, 1 model selected 
    9475 
    9476 > select add #22/C:172
    9477 
    9478 79 atoms, 73 bonds, 9 residues, 1 model selected 
    9479 
    9480 > select add #22/C:173
    9481 
    9482 87 atoms, 80 bonds, 10 residues, 1 model selected 
    9483 
    9484 > select add #22/C:171
    9485 
    9486 93 atoms, 85 bonds, 11 residues, 1 model selected 
    9487 
    9488 > hide sel cartoons
    9489 
    9490 > select add #22/C:170
    9491 
    9492 97 atoms, 88 bonds, 12 residues, 1 model selected 
    9493 
    9494 > hide sel cartoons
    9495 
    9496 > select add #22/C:113
    9497 
    9498 103 atoms, 93 bonds, 13 residues, 1 model selected 
    9499 
    9500 > select add #22/C:114
    9501 
    9502 111 atoms, 100 bonds, 14 residues, 1 model selected 
    9503 
    9504 > select up
    9505 
    9506 293 atoms, 297 bonds, 38 residues, 1 model selected 
    9507 
    9508 > select clear
    9509 
    9510 [Repeated 1 time(s)]
    9511 
    9512 > select add #22/C:121
    9513 
    9514 6 atoms, 5 bonds, 1 residue, 1 model selected 
    9515 
    9516 > select up
    9517 
    9518 54 atoms, 53 bonds, 8 residues, 1 model selected 
    9519 
    9520 > select up
    9521 
    9522 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    9523 
    9524 > select down
    9525 
    9526 54 atoms, 53 bonds, 8 residues, 1 model selected 
    9527 
    9528 > hide sel cartoons
    9529 
    9530 Drag select of 2 residues 
    9531 
    9532 > hide sel cartoons
    9533 
    9534 > select up
    9535 
    9536 2 atoms, 1 bond, 1 residue, 1 model selected 
    9537 
    9538 > select up
    9539 
    9540 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9541 
    9542 > hide sel atoms
    9543 
    9544 > select add #22/C:316
    9545 
    9546 20 atoms, 18 bonds, 2 residues, 1 model selected 
    9547 
    9548 > select add #22/C:315
    9549 
    9550 28 atoms, 25 bonds, 3 residues, 1 model selected 
    9551 
    9552 > select add #22/C:314
    9553 
    9554 35 atoms, 31 bonds, 4 residues, 1 model selected 
    9555 
    9556 > select add #22/C:312
    9557 
    9558 41 atoms, 36 bonds, 5 residues, 1 model selected 
    9559 
    9560 > select add #22/C:313
    9561 
    9562 46 atoms, 40 bonds, 6 residues, 1 model selected 
    9563 
    9564 > select subtract #22/C:313
    9565 
    9566 41 atoms, 36 bonds, 5 residues, 1 model selected 
    9567 
    9568 > select add #22/C:313
    9569 
    9570 46 atoms, 40 bonds, 6 residues, 1 model selected 
    9571 
    9572 > select add #22/C:311
    9573 
    9574 56 atoms, 50 bonds, 7 residues, 1 model selected 
    9575 
    9576 > select subtract #22/C:311
    9577 
    9578 46 atoms, 40 bonds, 6 residues, 1 model selected 
    9579 
    9580 > select add #22/C:310
    9581 
    9582 51 atoms, 44 bonds, 7 residues, 1 model selected 
    9583 
    9584 > select add #22/C:311
    9585 
    9586 61 atoms, 54 bonds, 8 residues, 1 model selected 
    9587 
    9588 > select add #22/C:309
    9589 
    9590 69 atoms, 61 bonds, 9 residues, 1 model selected 
    9591 
    9592 > select add #22/C:308
    9593 
    9594 77 atoms, 68 bonds, 10 residues, 1 model selected 
    9595 
    9596 > select add #22/C:307
    9597 
    9598 87 atoms, 78 bonds, 11 residues, 1 model selected 
    9599 
    9600 > select subtract #22/C:307
    9601 
    9602 77 atoms, 68 bonds, 10 residues, 1 model selected 
    9603 
    9604 > select add #22/C:307
    9605 
    9606 87 atoms, 78 bonds, 11 residues, 1 model selected 
    9607 
    9608 > hide sel cartoons
    9609 
    9610 > select add #22/C:306
    9611 
    9612 91 atoms, 81 bonds, 12 residues, 1 model selected 
    9613 
    9614 > select add #22/C:305
    9615 
    9616 95 atoms, 84 bonds, 13 residues, 1 model selected 
    9617 
    9618 > select add #22/C:304
    9619 
    9620 103 atoms, 91 bonds, 14 residues, 1 model selected 
    9621 
    9622 > select add #22/C:303
    9623 
    9624 110 atoms, 98 bonds, 15 residues, 1 model selected 
    9625 Drag select of 3 residues 
    9626 
    9627 > select add #22/C:301
    9628 
    9629 147 atoms, 104 bonds, 19 residues, 1 model selected 
    9630 
    9631 > select add #22/C:300
    9632 
    9633 154 atoms, 111 bonds, 20 residues, 1 model selected 
    9634 
    9635 > select add #22/C:299
    9636 
    9637 162 atoms, 118 bonds, 21 residues, 1 model selected 
    9638 
    9639 > hide sel cartoons
    9640 
    9641 > select add #22/C:290
    9642 
    9643 171 atoms, 126 bonds, 22 residues, 1 model selected 
    9644 Drag select of 1 residues 
    9645 [Repeated 1 time(s)]
    9646 
    9647 > select add #22/C:293
    9648 
    9649 194 atoms, 133 bonds, 25 residues, 1 model selected 
    9650 Drag select of 1 residues 
    9651 
    9652 > select add #22/C:295
    9653 
    9654 207 atoms, 137 bonds, 27 residues, 1 model selected 
    9655 
    9656 > hide sel cartoons
    9657 
    9658 > select clear
    9659 
    9660 [Repeated 1 time(s)]Drag select of 21 atoms, 20 bonds 
    9661 
    9662 > hide sel atoms
    9663 
    9664 Drag select of 4 atoms, 11 residues, 5 bonds 
    9665 
    9666 > select up
    9667 
    9668 94 atoms, 92 bonds, 12 residues, 1 model selected 
    9669 
    9670 > select up
    9671 
    9672 98 atoms, 96 bonds, 12 residues, 1 model selected 
    9673 
    9674 > select up
    9675 
    9676 183 atoms, 185 bonds, 22 residues, 1 model selected 
    9677 
    9678 > select up
    9679 
    9680 2001 atoms, 2029 bonds, 259 residues, 1 model selected 
    9681 
    9682 > select down
    9683 
    9684 183 atoms, 185 bonds, 22 residues, 1 model selected 
    9685 
    9686 > hide sel cartoons
    9687 
    9688 > hide sel atoms
    9689 
    9690 > select clear
    9691 
    9692 > select add #22/C:257
    9693 
    9694 5 atoms, 4 bonds, 1 residue, 1 model selected 
    9695 
    9696 > select add #22/C:256
    9697 
    9698 9 atoms, 7 bonds, 2 residues, 1 model selected 
    9699 
    9700 > select add #22/C:255
    9701 
    9702 20 atoms, 17 bonds, 3 residues, 1 model selected 
    9703 
    9704 > hide sel cartoons
    9705 
    9706 > select add #22/C:280
    9707 
    9708 29 atoms, 25 bonds, 4 residues, 1 model selected 
    9709 
    9710 > select add #22/C:282
    9711 
    9712 34 atoms, 29 bonds, 5 residues, 1 model selected 
    9713 
    9714 > select add #22/C:283
    9715 
    9716 41 atoms, 35 bonds, 6 residues, 1 model selected 
    9717 
    9718 > select add #22/C:285
    9719 
    9720 48 atoms, 41 bonds, 7 residues, 1 model selected 
    9721 
    9722 > select add #22/C:281
    9723 
    9724 56 atoms, 48 bonds, 8 residues, 1 model selected 
    9725 
    9726 > select add #22/C:286
    9727 
    9728 63 atoms, 54 bonds, 9 residues, 1 model selected 
    9729 
    9730 > select add #22/C:284
    9731 
    9732 74 atoms, 65 bonds, 10 residues, 1 model selected 
    9733 
    9734 > select add #22/C:287
    9735 
    9736 82 atoms, 72 bonds, 11 residues, 1 model selected 
    9737 
    9738 > hide sel cartoons
    9739 
    9740 Drag select of 5 residues 
    9741 
    9742 > hide sel cartoons
    9743 
    9744 > select #22/C:289
    9745 
    9746 7 atoms, 6 bonds, 1 residue, 1 model selected 
    9747 
    9748 > select clear
    9749 
    9750 > select #22/C:142
    9751 
    9752 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9753 
    9754 > select clear
    9755 
    9756 > select #22/C:289
    9757 
    9758 7 atoms, 6 bonds, 1 residue, 1 model selected 
    9759 
    9760 > hide sel cartoons
    9761 
    9762 > select #22/C:143
    9763 
    9764 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9765 
    9766 > select #22/D:133
    9767 
    9768 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9769 
    9770 > select clear
    9771 
    9772 > select #22/C-D:170-171
    9773 
    9774 20 atoms, 18 bonds, 4 residues, 1 model selected 
    9775 
    9776 > select #22/C-D:133-171
    9777 
    9778 566 atoms, 574 bonds, 78 residues, 1 model selected 
    9779 
    9780 > select clear
    9781 
    9782 > select #22/D:114
    9783 
    9784 8 atoms, 7 bonds, 1 residue, 1 model selected 
    9785 
    9786 > select #22/C-D:69-114
    9787 
    9788 694 atoms, 698 bonds, 92 residues, 1 model selected 
    9789 
    9790 > select #22/C-D:69-133
    9791 
    9792 956 atoms, 960 bonds, 130 residues, 1 model selected 
    9793 
    9794 > select #22/C-D:114
    9795 
    9796 16 atoms, 14 bonds, 2 residues, 1 model selected 
    9797 
    9798 > select #22/C-D:114-126
    9799 
    9800 188 atoms, 186 bonds, 26 residues, 1 model selected 
    9801 
    9802 > show sel cartoons
    9803 
    9804 > select #22/C-D:127
    9805 
    9806 16 atoms, 14 bonds, 2 residues, 1 model selected 
    9807 
    9808 > select #22/C-D:127-133
    9809 
    9810 90 atoms, 88 bonds, 14 residues, 1 model selected 
    9811 
    9812 > show sel cartoons
    9813 
    9814 > select clear
    9815 
    9816 Drag select of 20 residues 
    9817 
    9818 > hide sel cartoons
    9819 
    9820 > select #22/D:334
    9821 
    9822 5 atoms, 4 bonds, 1 residue, 1 model selected 
    9823 
    9824 > select #22/D:314
    9825 
    9826 7 atoms, 6 bonds, 1 residue, 1 model selected 
    9827 
    9828 > select #22/C-D:314-315
    9829 
    9830 30 atoms, 28 bonds, 4 residues, 1 model selected 
    9831 
    9832 > select #22/C-D:314-334
    9833 
    9834 332 atoms, 332 bonds, 42 residues, 1 model selected 
    9835 
    9836 > hide sel cartoons
    9837 
    9838 > show sel cartoons
    9839 
    9840 > show sel atoms
    9841 
    9842 > hide sel atoms
    9843 
    9844 > undo
    9845 
    9846 [Repeated 1 time(s)]
    9847 
    9848 > select clear
    9849 
    9850 Drag select of 14 residues 
    9851 Drag select of 10 residues 
    9852 
    9853 > select up
    9854 
    9855 199 atoms, 201 bonds, 25 residues, 1 model selected 
    9856 
    9857 > select up
    9858 
    9859 425 atoms, 433 bonds, 55 residues, 1 model selected 
    9860 
    9861 > hide sel cartoons
    9862 
    9863 > select #22/C:288@CA
    9864 
    9865 1 atom, 1 residue, 1 model selected 
    9866 
    9867 > select clear
    9868 
    9869 [Repeated 1 time(s)]
    9870 
    9871 > select #22/C:142
    9872 
    9873 4 atoms, 3 bonds, 1 residue, 1 model selected 
    9874 
    9875 > combine #22
    9876 
    9877 > hide #!21 models
    9878 
    9879 > select add #22
    9880 
    9881 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    9882 
    9883 > select subtract #22
    9884 
    9885 Nothing selected 
    9886 
    9887 > select clear
    9888 
    9889 > select #22/C:182
    9890 
    9891 11 atoms, 10 bonds, 1 residue, 1 model selected 
    9892 
    9893 > select #22/C:144
    9894 
    9895 11 atoms, 11 bonds, 1 residue, 1 model selected 
    9896 
    9897 > select #22/C-D:144
    9898 
    9899 22 atoms, 22 bonds, 2 residues, 1 model selected 
    9900 
    9901 > select #22/C-D:144-185
    9902 
    9903 646 atoms, 660 bonds, 84 residues, 1 model selected 
    9904 
    9905 > hide sel cartoons
    9906 
    9907 > show sel cartoons
    9908 
    9909 > undo
    9910 
    9911 [Repeated 1 time(s)]
    9912 
    9913 > select clear
    9914 
    9915 [Repeated 1 time(s)]
    9916 
    9917 > select up
    9918 
    9919 2 atoms, 1 bond, 1 residue, 1 model selected 
    9920 
    9921 > select up
    9922 
    9923 9 atoms, 8 bonds, 1 residue, 1 model selected 
    9924 
    9925 > select #22/C:144
    9926 
    9927 11 atoms, 11 bonds, 1 residue, 1 model selected 
    9928 
    9929 > select add #22/C:142
    9930 
    9931 15 atoms, 14 bonds, 2 residues, 1 model selected 
    9932 
    9933 > select subtract #22/C:142
    9934 
    9935 11 atoms, 11 bonds, 1 residue, 1 model selected 
    9936 
    9937 > select add #22/C:142
    9938 
    9939 15 atoms, 14 bonds, 2 residues, 1 model selected 
    9940 
    9941 > select add #22/C:143
    9942 
    9943 24 atoms, 22 bonds, 3 residues, 1 model selected 
    9944 
    9945 > select add #22/C:288
    9946 
    9947 33 atoms, 30 bonds, 4 residues, 1 model selected 
    9948 
    9949 > hide sel atoms
    9950 
    9951 > hide sel cartoons
    9952 
    9953 Drag select of 7 atoms, 6 residues, 7 bonds 
    9954 
    9955 > hide sel atoms
    9956 
    9957 > hide sel cartoons
    9958 
    9959 Drag select of 8 atoms, 21 residues, 7 bonds 
    9960 
    9961 > hide sel atoms
    9962 
    9963 > hide sel cartoons
    9964 
    9965 > select clear
    9966 
    9967 > select #22/D:335
    9968 
    9969 7 atoms, 7 bonds, 1 residue, 1 model selected 
    9970 
    9971 > hide sel cartoons
    9972 
    9973 Drag select of 2 residues 
    9974 
    9975 > select clear
    9976 
    9977 > select #22/D:336
    9978 
    9979 10 atoms, 10 bonds, 1 residue, 1 model selected 
    9980 
    9981 > hide sel cartoons
    9982 
    9983 > show sel cartoons
    9984 
    9985 > select clear
    9986 
    9987 > select #22/D:101@CA
    9988 
    9989 1 atom, 1 residue, 1 model selected 
    9990 
    9991 > select clear
    9992 
    9993 > save /Users/mimbert/Desktop/image5.png supersample 3
    9994 
    9995 > show #!17 models
    9996 
    9997 > hide #!17 models
    9998 
    9999 > show #!17 models
    10000 
    10001 > combine #17
    10002 
    10003 > hide #!17 models
    10004 
    10005 > save view test
    10006 
    10007 Cannot determine format for 'view' 
    10008 
    10009 > view name test
    10010 
    10011 Drag select of 67 residues 
    10012 
    10013 > hide sel atoms
    10014 
    10015 > hide sel cartoons
    10016 
    10017 Drag select of 63 residues 
    10018 
    10019 > hide sel cartoons
    10020 
    10021 Drag select of 33 atoms, 33 bonds, 109 residues, 1 pseudobonds 
    10022 
    10023 > select up
    10024 
    10025 1303 atoms, 1339 bonds, 1 pseudobond, 153 residues, 2 models selected 
    10026 
    10027 > select up
    10028 
    10029 2581 atoms, 2639 bonds, 1 pseudobond, 320 residues, 2 models selected 
    10030 
    10031 > select down
    10032 
    10033 1303 atoms, 1339 bonds, 1 pseudobond, 153 residues, 2 models selected 
    10034 Drag select of 23 residues 
    10035 
    10036 > hide sel atoms
    10037 
    10038 > hide sel cartoons
    10039 
    10040 > select #23/W:17
    10041 
    10042 22 atoms, 24 bonds, 1 residue, 1 model selected 
    10043 
    10044 > select up
    10045 
    10046 173 atoms, 196 bonds, 8 residues, 1 model selected 
    10047 
    10048 > select up
    10049 
    10050 4990 atoms, 5082 bonds, 633 residues, 1 model selected 
    10051 
    10052 > select down
    10053 
    10054 173 atoms, 196 bonds, 8 residues, 1 model selected 
    10055 
    10056 > hide sel atoms
    10057 
    10058 > hide sel cartoons
    10059 
    10060 Drag select of 13 atoms, 11 bonds, 66 residues, 1 pseudobonds 
    10061 
    10062 > hide sel cartoons
    10063 
    10064 Drag select of 32 atoms, 33 bonds, 8 residues, 1 pseudobonds 
    10065 
    10066 > hide sel cartoons
    10067 
    10068 > hide sel atoms
    10069 
    10070 [Repeated 1 time(s)]Drag select of 15 residues 
    10071 
    10072 > hide sel cartoons
    10073 
    10074 Drag select of 13 residues 
    10075 
    10076 > hide sel cartoons
    10077 
    10078 > select #23/D:139
    10079 
    10080 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10081 
    10082 > hide sel cartoons
    10083 
    10084 Drag select of 21 residues 
    10085 
    10086 > hide sel cartoons
    10087 
    10088 Drag select of 10 residues 
    10089 
    10090 > hide sel atoms
    10091 
    10092 > hide sel cartoons
    10093 
    10094 Drag select of 7 residues 
    10095 
    10096 > hide sel cartoons
    10097 
    10098 > select #23/D:240
    10099 
    10100 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10101 
    10102 > hide sel cartoons
    10103 
    10104 Drag select of 2 residues 
    10105 
    10106 > hide sel cartoons
    10107 
    10108 Drag select of 2 residues 
    10109 [Repeated 1 time(s)]
    10110 
    10111 > hide sel cartoons
    10112 
    10113 Drag select of 24 residues 
    10114 
    10115 > select up
    10116 
    10117 213 atoms, 216 bonds, 28 residues, 1 model selected 
    10118 
    10119 > hide sel cartoons
    10120 
    10121 Drag select of 25 residues 
    10122 
    10123 > select up
    10124 
    10125 213 atoms, 211 bonds, 29 residues, 1 model selected 
    10126 
    10127 > select down
    10128 
    10129 185 atoms, 25 residues, 1 model selected 
    10130 
    10131 > select up
    10132 
    10133 213 atoms, 211 bonds, 29 residues, 1 model selected 
    10134 
    10135 > select down
    10136 
    10137 185 atoms, 25 residues, 1 model selected 
    10138 
    10139 > hide sel cartoons
    10140 
    10141 > select clear
    10142 
    10143 > select #23/D:51
    10144 
    10145 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10146 
    10147 > hide sel cartoons
    10148 
    10149 > select clear
    10150 
    10151 > select #23/D:59
    10152 
    10153 9 atoms, 8 bonds, 1 residue, 1 model selected 
    10154 
    10155 > hide sel cartoons
    10156 
    10157 Drag select of 3 residues 
    10158 
    10159 > hide sel cartoons
    10160 
    10161 > select #23/D:79
    10162 
    10163 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10164 
    10165 > hide sel atoms
    10166 
    10167 [Repeated 1 time(s)]
    10168 
    10169 > show sel atoms
    10170 
    10171 > style sel stick
    10172 
    10173 Changed 5 atom styles 
    10174 
    10175 > hide sel atoms
    10176 
    10177 Drag select of 20 residues 
    10178 
    10179 > select up
    10180 
    10181 384 atoms, 386 bonds, 49 residues, 1 model selected 
    10182 
    10183 > hide sel cartoons
    10184 
    10185 > select #23/E:122
    10186 
    10187 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10188 
    10189 > select add #23/E:123
    10190 
    10191 15 atoms, 13 bonds, 2 residues, 1 model selected 
    10192 
    10193 > select add #23/E:126
    10194 
    10195 26 atoms, 24 bonds, 3 residues, 1 model selected 
    10196 
    10197 > select add #23/E:285
    10198 
    10199 35 atoms, 32 bonds, 4 residues, 1 model selected 
    10200 
    10201 > select up
    10202 
    10203 72 atoms, 72 bonds, 9 residues, 1 model selected 
    10204 
    10205 > hide sel cartoons
    10206 
    10207 > select add #23/E:263
    10208 
    10209 79 atoms, 78 bonds, 10 residues, 1 model selected 
    10210 
    10211 > select add #23/E:270
    10212 
    10213 86 atoms, 84 bonds, 11 residues, 1 model selected 
    10214 
    10215 > select up
    10216 
    10217 133 atoms, 131 bonds, 18 residues, 1 model selected 
    10218 
    10219 > hide sel cartoons
    10220 
    10221 Drag select of 3 residues, 1 pseudobonds 
    10222 
    10223 > hide sel cartoons
    10224 
    10225 > select #23/E:311
    10226 
    10227 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10228 
    10229 > select add #23/E:305
    10230 
    10231 12 atoms, 10 bonds, 2 residues, 1 model selected 
    10232 
    10233 > select up
    10234 
    10235 97 atoms, 97 bonds, 12 residues, 1 model selected 
    10236 
    10237 > hide sel cartoons
    10238 
    10239 > select clear
    10240 
    10241 > select up
    10242 
    10243 2 atoms, 1 bond, 1 residue, 1 model selected 
    10244 
    10245 > select up
    10246 
    10247 31 atoms, 33 bonds, 1 residue, 1 model selected 
    10248 
    10249 > select down
    10250 
    10251 2 atoms, 1 bond, 1 residue, 1 model selected 
    10252 
    10253 > select up
    10254 
    10255 31 atoms, 33 bonds, 1 residue, 1 model selected 
    10256 
    10257 > select up
    10258 
    10259 2408 atoms, 2443 bonds, 312 residues, 1 model selected 
    10260 
    10261 > select down
    10262 
    10263 31 atoms, 33 bonds, 1 residue, 1 model selected 
    10264 
    10265 > hide sel atoms
    10266 
    10267 > select add #23/D:320
    10268 
    10269 39 atoms, 40 bonds, 2 residues, 1 model selected 
    10270 
    10271 > select add #23/D:322
    10272 
    10273 48 atoms, 48 bonds, 3 residues, 1 model selected 
    10274 
    10275 > select add #23/D:324
    10276 
    10277 57 atoms, 56 bonds, 4 residues, 1 model selected 
    10278 
    10279 > select add #23/D:323
    10280 
    10281 62 atoms, 60 bonds, 5 residues, 1 model selected 
    10282 Drag select of 1 residues 
    10283 
    10284 > select subtract #23/D:321
    10285 
    10286 62 atoms, 60 bonds, 5 residues, 1 model selected 
    10287 
    10288 > select add #23/D:321
    10289 
    10290 69 atoms, 67 bonds, 6 residues, 1 model selected 
    10291 
    10292 > hide sel cartoons
    10293 
    10294 > select #23/D:319
    10295 
    10296 6 atoms, 5 bonds, 1 residue, 1 model selected 
    10297 
    10298 > show sel atoms
    10299 
    10300 > style sel stick
    10301 
    10302 Changed 6 atom styles 
    10303 
    10304 > color sel byhetero
    10305 
    10306 > select #23/D:318
    10307 
    10308 7 atoms, 7 bonds, 1 residue, 1 model selected 
    10309 
    10310 > select add #23/D:316
    10311 
    10312 15 atoms, 14 bonds, 2 residues, 1 model selected 
    10313 
    10314 > select add #23/D:315
    10315 
    10316 27 atoms, 26 bonds, 3 residues, 1 model selected 
    10317 
    10318 > select add #23/D:317
    10319 
    10320 33 atoms, 31 bonds, 4 residues, 1 model selected 
    10321 
    10322 > hide sel cartoons
    10323 
    10324 > select add #23/D:297
    10325 
    10326 40 atoms, 37 bonds, 5 residues, 1 model selected 
    10327 
    10328 > select add #23/E:236
    10329 
    10330 44 atoms, 40 bonds, 6 residues, 1 model selected 
    10331 
    10332 > select subtract #23/E:236
    10333 
    10334 40 atoms, 37 bonds, 5 residues, 1 model selected 
    10335 
    10336 > select add #23/D:290
    10337 
    10338 48 atoms, 44 bonds, 6 residues, 1 model selected 
    10339 
    10340 > select up
    10341 
    10342 178 atoms, 180 bonds, 24 residues, 1 model selected 
    10343 
    10344 > hide sel cartoons
    10345 
    10346 > select add #23/D:298
    10347 
    10348 185 atoms, 186 bonds, 25 residues, 1 model selected 
    10349 
    10350 > select add #23/D:286
    10351 
    10352 192 atoms, 193 bonds, 26 residues, 1 model selected 
    10353 
    10354 > hide sel cartoons
    10355 
    10356 Drag select of 2 residues 
    10357 
    10358 > hide sel cartoons
    10359 
    10360 Drag select of 1 atoms 
    10361 
    10362 > select add #23/D:402@CA
    10363 
    10364 14 atoms, 4 residues, 1 model selected 
    10365 
    10366 > hide sel atoms
    10367 
    10368 > select add #23/D:257
    10369 
    10370 22 atoms, 7 bonds, 5 residues, 1 model selected 
    10371 Drag select of 1 residues 
    10372 
    10373 > select add #23/D:255
    10374 
    10375 35 atoms, 14 bonds, 7 residues, 1 model selected 
    10376 
    10377 > select add #23/D:253
    10378 
    10379 43 atoms, 21 bonds, 8 residues, 1 model selected 
    10380 
    10381 > select add #23/D:252
    10382 
    10383 51 atoms, 28 bonds, 9 residues, 1 model selected 
    10384 
    10385 > hide sel cartoons
    10386 
    10387 > select #23/D:254
    10388 
    10389 11 atoms, 10 bonds, 1 residue, 1 model selected 
    10390 
    10391 > hide sel cartoons
    10392 
    10393 Drag select of 3 residues 
    10394 
    10395 > hide sel cartoons
    10396 
    10397 > select add #23/E:145
    10398 
    10399 30 atoms, 8 bonds, 4 residues, 1 model selected 
    10400 
    10401 > select add #23/E:128
    10402 
    10403 39 atoms, 16 bonds, 5 residues, 1 model selected 
    10404 
    10405 > select up
    10406 
    10407 85 atoms, 82 bonds, 11 residues, 1 model selected 
    10408 
    10409 > select up
    10410 
    10411 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    10412 
    10413 > select down
    10414 
    10415 85 atoms, 82 bonds, 11 residues, 1 model selected 
    10416 
    10417 > hide sel cartoons
    10418 
    10419 > select add #23/E:142
    10420 
    10421 92 atoms, 88 bonds, 12 residues, 1 model selected 
    10422 
    10423 > select add #23/E:133
    10424 
    10425 101 atoms, 96 bonds, 13 residues, 1 model selected 
    10426 
    10427 > select up
    10428 
    10429 161 atoms, 160 bonds, 21 residues, 1 model selected 
    10430 
    10431 > hide sel cartoons
    10432 
    10433 > select add #23/E:334
    10434 
    10435 168 atoms, 166 bonds, 22 residues, 1 model selected 
    10436 
    10437 > select add #23/E:328
    10438 
    10439 173 atoms, 170 bonds, 23 residues, 1 model selected 
    10440 
    10441 > select up
    10442 
    10443 230 atoms, 228 bonds, 31 residues, 1 model selected 
    10444 
    10445 > select up
    10446 
    10447 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    10448 
    10449 > select down
    10450 
    10451 230 atoms, 228 bonds, 31 residues, 1 model selected 
    10452 
    10453 > hide sel cartoons
    10454 
    10455 > select add #23/E:332
    10456 
    10457 238 atoms, 235 bonds, 32 residues, 1 model selected 
    10458 
    10459 > select add #23/E:331
    10460 
    10461 243 atoms, 239 bonds, 33 residues, 1 model selected 
    10462 
    10463 > hide sel atoms
    10464 
    10465 > hide sel cartoons
    10466 
    10467 > select add #23/E:156
    10468 
    10469 252 atoms, 247 bonds, 34 residues, 1 model selected 
    10470 
    10471 > select add #23/E:155
    10472 
    10473 256 atoms, 250 bonds, 35 residues, 1 model selected 
    10474 
    10475 > select add #23/E:157
    10476 
    10477 261 atoms, 254 bonds, 36 residues, 1 model selected 
    10478 
    10479 > select add #23/E:159
    10480 
    10481 273 atoms, 266 bonds, 37 residues, 1 model selected 
    10482 Drag select of 1 residues 
    10483 
    10484 > select add #23/E:160
    10485 
    10486 289 atoms, 273 bonds, 39 residues, 1 model selected 
    10487 Drag select of 1 residues 
    10488 
    10489 > select add #23/E:162
    10490 
    10491 304 atoms, 279 bonds, 41 residues, 1 model selected 
    10492 Drag select of 1 residues 
    10493 
    10494 > select add #23/E:165
    10495 
    10496 320 atoms, 285 bonds, 43 residues, 1 model selected 
    10497 
    10498 > select add #23/E:166
    10499 
    10500 331 atoms, 296 bonds, 44 residues, 1 model selected 
    10501 
    10502 > select add #23/E:164
    10503 
    10504 335 atoms, 299 bonds, 45 residues, 1 model selected 
    10505 
    10506 > hide sel cartoons
    10507 
    10508 > select add #23/E:235
    10509 
    10510 346 atoms, 309 bonds, 46 residues, 1 model selected 
    10511 
    10512 > select add #23/E:236
    10513 
    10514 350 atoms, 312 bonds, 47 residues, 1 model selected 
    10515 
    10516 > select add #23/E:237
    10517 
    10518 359 atoms, 320 bonds, 48 residues, 1 model selected 
    10519 
    10520 > hide sel cartoons
    10521 
    10522 > save "/Users/mimbert/OneDrive - Institut Pasteur
    10523 > Paris/Papers/fig1_070124.cxs"
    10524 
    10525 > select #23/D:243
    10526 
    10527 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10528 
    10529 > select up
    10530 
    10531 187 atoms, 189 bonds, 22 residues, 1 model selected 
    10532 
    10533 > select down
    10534 
    10535 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10536 
    10537 > show sel atoms
    10538 
    10539 > style sel stick
    10540 
    10541 Changed 8 atom styles 
    10542 
    10543 > color sel byhetero
    10544 
    10545 > select #23/E:230
    10546 
    10547 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10548 
    10549 > show sel atoms
    10550 
    10551 > style sel stick
    10552 
    10553 Changed 7 atom styles 
    10554 
    10555 > color sel byhetero
    10556 
    10557 > select #23/D:250
    10558 
    10559 11 atoms, 10 bonds, 1 residue, 1 model selected 
    10560 
    10561 > show sel atoms
    10562 
    10563 > style sel stick
    10564 
    10565 Changed 11 atom styles 
    10566 
    10567 > color sel byhetero
    10568 
    10569 > select #22/D:93
    10570 
    10571 11 atoms, 10 bonds, 1 residue, 1 model selected 
    10572 
    10573 > select #23/D:80
    10574 
    10575 9 atoms, 8 bonds, 1 residue, 1 model selected 
    10576 
    10577 > show sel atoms
    10578 
    10579 > style sel stick
    10580 
    10581 Changed 9 atom styles 
    10582 
    10583 > hide sel atoms
    10584 
    10585 > select #23/D:79
    10586 
    10587 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10588 
    10589 > show sel atoms
    10590 
    10591 > color sel byhetero
    10592 
    10593 > select #23/E:199
    10594 
    10595 10 atoms, 10 bonds, 1 residue, 1 model selected 
    10596 
    10597 > show sel atoms
    10598 
    10599 > style sel stick
    10600 
    10601 Changed 10 atom styles 
    10602 
    10603 > color sel byhetero
    10604 
    10605 > select #23/E:203
    10606 
    10607 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10608 
    10609 > show sel atoms
    10610 
    10611 > style sel stick
    10612 
    10613 Changed 8 atom styles 
    10614 
    10615 > color sel byhetero
    10616 
    10617 [Repeated 1 time(s)]
    10618 
    10619 > select #23/D:86
    10620 
    10621 11 atoms, 11 bonds, 1 residue, 1 model selected 
    10622 
    10623 > show sel atoms
    10624 
    10625 > style sel stick
    10626 
    10627 Changed 11 atom styles 
    10628 
    10629 > color sel byhetero
    10630 
    10631 > select #23/D:87
    10632 
    10633 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10634 
    10635 > show sel atoms
    10636 
    10637 > style sel stick
    10638 
    10639 Changed 7 atom styles 
    10640 
    10641 > color sel byhetero
    10642 
    10643 > select clear
    10644 
    10645 > select #23/E:190
    10646 
    10647 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10648 
    10649 > show sel atoms
    10650 
    10651 > style sel stick
    10652 
    10653 Changed 5 atom styles 
    10654 
    10655 > color sel byhetero
    10656 
    10657 Drag select of 1 atoms, 10 residues 
    10658 
    10659 > select clear
    10660 
    10661 > select #23/E:191
    10662 
    10663 12 atoms, 12 bonds, 1 residue, 1 model selected 
    10664 
    10665 > show sel atoms
    10666 
    10667 > style sel stick
    10668 
    10669 Changed 12 atom styles 
    10670 
    10671 > color sel byhetero
    10672 
    10673 > select #23/E:189
    10674 
    10675 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10676 
    10677 > show sel atoms
    10678 
    10679 > style sel stick
    10680 
    10681 Changed 7 atom styles 
    10682 
    10683 > color sel byhetero
    10684 
    10685 > select #23/E:187
    10686 
    10687 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10688 
    10689 > show sel atoms
    10690 
    10691 > style sel stick
    10692 
    10693 Changed 8 atom styles 
    10694 
    10695 > color sel byhetero
    10696 
    10697 > select #23/D:88
    10698 
    10699 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10700 
    10701 > show sel atoms
    10702 
    10703 > style sel stick
    10704 
    10705 Changed 7 atom styles 
    10706 
    10707 > color sel byhetero
    10708 
    10709 > select #23/E:186
    10710 
    10711 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10712 
    10713 > show sel atoms
    10714 
    10715 > style sel stick
    10716 
    10717 Changed 8 atom styles 
    10718 
    10719 > color sel byhetero
    10720 
    10721 > select #23/D:90
    10722 
    10723 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10724 
    10725 > select #23/D:90
    10726 
    10727 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10728 Drag select of 1 residues 
    10729 
    10730 > select #23/D:90
    10731 
    10732 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10733 
    10734 > select #23/D:89
    10735 
    10736 5 atoms, 4 bonds, 1 residue, 1 model selected 
    10737 
    10738 > show sel atoms
    10739 
    10740 > style sel stick
    10741 
    10742 Changed 5 atom styles 
    10743 
    10744 > select #23/D:93
    10745 
    10746 10 atoms, 10 bonds, 1 residue, 1 model selected 
    10747 
    10748 > show sel atoms
    10749 
    10750 > style sel stick
    10751 
    10752 Changed 10 atom styles 
    10753 
    10754 > color sel byhetero
    10755 
    10756 > select clear
    10757 
    10758 > select #22/C:239
    10759 
    10760 8 atoms, 7 bonds, 1 residue, 1 model selected 
    10761 
    10762 > select #23/E:168
    10763 
    10764 7 atoms, 7 bonds, 1 residue, 1 model selected 
    10765 
    10766 > show sel atoms
    10767 
    10768 > style sel stick
    10769 
    10770 Changed 7 atom styles 
    10771 
    10772 > color sel byhetero
    10773 
    10774 > select #23/D:96
    10775 
    10776 11 atoms, 10 bonds, 1 residue, 1 model selected 
    10777 
    10778 > show sel atoms
    10779 
    10780 > style sel stick
    10781 
    10782 Changed 11 atom styles 
    10783 
    10784 > color sel byhetero
    10785 
    10786 > select #23/E:167
    10787 
    10788 11 atoms, 10 bonds, 1 residue, 1 model selected 
    10789 
    10790 > show sel atoms
    10791 
    10792 > style sel stick
    10793 
    10794 Changed 11 atom styles 
    10795 
    10796 > color sel byhetero
    10797 
    10798 > select #23/D:119
    10799 
    10800 7 atoms, 6 bonds, 1 residue, 1 model selected 
    10801 
    10802 > select #23/D:118
    10803 
    10804 9 atoms, 8 bonds, 1 residue, 1 model selected 
    10805 
    10806 > show sel atoms
    10807 
    10808 > style sel stick
    10809 
    10810 Changed 9 atom styles 
    10811 
    10812 > color sel byhetero
    10813 
    10814 > select clear
    10815 
    10816 [Repeated 1 time(s)]
    10817 
    10818 > select #23/E:233
    10819 
    10820 6 atoms, 5 bonds, 1 residue, 1 model selected 
    10821 
    10822 > select #23/E:234
    10823 
    10824 4 atoms, 3 bonds, 1 residue, 1 model selected 
    10825 
    10826 > select #22/C:254
    10827 
    10828 4 atoms, 3 bonds, 1 residue, 1 model selected 
    10829 
    10830 > test
    10831 
    10832 Unknown command: test 
    10833 
    10834 > view test
    10835 
    10836 > select #23/D:98
    10837 
    10838 9 atoms, 8 bonds, 1 residue, 1 model selected 
    10839 
    10840 > select up
    10841 
    10842 26 atoms, 25 bonds, 3 residues, 1 model selected 
    10843 
    10844 > select up
    10845 
    10846 1947 atoms, 1974 bonds, 253 residues, 1 model selected 
    10847 
    10848 > select up
    10849 
    10850 1954 atoms, 1981 bonds, 254 residues, 1 model selected 
    10851 
    10852 > select up
    10853 
    10854 2376 atoms, 2410 bonds, 310 residues, 1 model selected 
    10855 
    10856 > color sel dark gray
    10857 
    10858 > color sel dim gray
    10859 
    10860 > color sel byhetero
    10861 
    10862 > select clear
    10863 
    10864 > select #22/C-D:201
    10865 
    10866 16 atoms, 14 bonds, 2 residues, 1 model selected 
    10867 
    10868 > select #22/C-D:201
    10869 
    10870 16 atoms, 14 bonds, 2 residues, 1 model selected 
    10871 Drag select of 2 residues 
    10872 
    10873 > select #22/C:251
    10874 
    10875 9 atoms, 8 bonds, 1 residue, 1 model selected 
    10876 
    10877 > combine #22,23
    10878 
    10879 Remapping chain ID 'D' in copy of 8bq2 (1).pdb #23 to 'F' 
    10880 Remapping chain ID 'W' in copy of 8bq2 (1).pdb #23 to 'X' 
    10881 
    10882 > hide #!22 models
    10883 
    10884 > hide #!23 models
    10885 
    10886 > select add #22
    10887 
    10888 5086 atoms, 5183 bonds, 4 pseudobonds, 642 residues, 2 models selected 
    10889 
    10890 > select subtract #22
    10891 
    10892 Nothing selected 
    10893 Drag select of 13 atoms, 12 bonds, 3 residues 
    10894 
    10895 > select clear
    10896 
    10897 Drag select of 13 atoms, 12 bonds, 1 residues 
    10898 Drag select of 24 atoms, 19 bonds, 38 residues 
    10899 
    10900 > hide sel cartoons
    10901 
    10902 > hide sel atoms
    10903 
    10904 Drag select of 33 atoms, 31 bonds, 70 residues 
    10905 
    10906 > hide sel atoms
    10907 
    10908 > hide sel cartoons
    10909 
    10910 Drag select of 55 atoms, 48 bonds, 28 residues 
    10911 
    10912 > hide sel atoms
    10913 
    10914 > hide sel cartoons
    10915 
    10916 Drag select of 28 atoms, 22 bonds, 48 residues 
    10917 Drag select of 25 atoms, 19 bonds, 26 residues 
    10918 
    10919 > hide sel atoms
    10920 
    10921 > hide sel cartoons
    10922 
    10923 Drag select of 18 residues 
    10924 Drag select of 12 residues 
    10925 
    10926 > hide sel atoms
    10927 
    10928 > hide sel cartoons
    10929 
    10930 > select #24/F:121
    10931 
    10932 6 atoms, 5 bonds, 1 residue, 1 model selected 
    10933 
    10934 > select add #24/F:120
    10935 
    10936 10 atoms, 8 bonds, 2 residues, 1 model selected 
    10937 
    10938 > select add #24/F:119
    10939 
    10940 17 atoms, 14 bonds, 3 residues, 1 model selected 
    10941 
    10942 > select subtract #24/F:119
    10943 
    10944 10 atoms, 8 bonds, 2 residues, 1 model selected 
    10945 
    10946 > hide sel cartoons
    10947 
    10948 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/figG_1.tif"
    10949 > width 2000 height 1526 supersample 4 transparentBackground true
    10950 
    10951 > rename #24 G1
    10952 
    10953 > hide #!24 models
    10954 
    10955 > show #!23 models
    10956 
    10957 > show #!22 models
    10958 
    10959 > combine #22,23
    10960 
    10961 Remapping chain ID 'D' in copy of 8bq2 (1).pdb #23 to 'F' 
    10962 Remapping chain ID 'W' in copy of 8bq2 (1).pdb #23 to 'X' 
    10963 
    10964 > hide #!22 models
    10965 
    10966 > hide #!23 models
    10967 
    10968 > select add #24
    10969 
    10970 10076 atoms, 10265 bonds, 14 pseudobonds, 1275 residues, 3 models selected 
    10971 
    10972 > select subtract #24
    10973 
    10974 Nothing selected 
    10975 Drag select of 25 atoms, 22 bonds, 42 residues 
    10976 
    10977 > hide sel cartoons
    10978 
    10979 > hide sel atoms
    10980 
    10981 > select #25/F:120
    10982 
    10983 4 atoms, 3 bonds, 1 residue, 1 model selected 
    10984 
    10985 > hide sel atoms
    10986 
    10987 > hide sel cartoons
    10988 
    10989 Drag select of 53 atoms, 49 bonds, 25 residues 
    10990 
    10991 > hide sel cartoons
    10992 
    10993 > hide sel atoms
    10994 
    10995 Drag select of 28 atoms, 22 bonds, 39 residues 
    10996 
    10997 > hide sel atoms
    10998 
    10999 > hide sel cartoons
    11000 
    11001 Drag select of 15 residues 
    11002 Drag select of 1 residues 
    11003 Drag select of 14 residues 
    11004 
    11005 > hide sel cartoons
    11006 
    11007 > hide sel atoms
    11008 
    11009 Drag select of 23 residues 
    11010 
    11011 > hide sel cartoons
    11012 
    11013 Drag select of 15 residues 
    11014 
    11015 > hide sel cartoons
    11016 
    11017 Drag select of 6 residues 
    11018 
    11019 > hide sel cartoons
    11020 
    11021 > view name 1
    11022 
    11023 > view test
    11024 
    11025 > view 1
    11026 
    11027 [Repeated 1 time(s)]
    11028 
    11029 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/figG_2.tif"
    11030 > width 2000 height 1526 supersample 4 transparentBackground true
    11031 
    11032 > rename #25 G2
    11033 
    11034 > hide #!25 models
    11035 
    11036 > combine #22,23
    11037 
    11038 Remapping chain ID 'D' in copy of 8bq2 (1).pdb #23 to 'F' 
    11039 Remapping chain ID 'W' in copy of 8bq2 (1).pdb #23 to 'X' 
    11040 Drag select of 208 atoms, 182 bonds, 206 residues 
    11041 
    11042 > hide sel atoms
    11043 
    11044 > hide sel cartoons
    11045 
    11046 > select #26/D:270
    11047 
    11048 5 atoms, 4 bonds, 1 residue, 1 model selected 
    11049 
    11050 > select #26/D:270
    11051 
    11052 5 atoms, 4 bonds, 1 residue, 1 model selected 
    11053 
    11054 > select add #26/F:250
    11055 
    11056 16 atoms, 14 bonds, 2 residues, 1 model selected 
    11057 Drag select of 2 residues 
    11058 
    11059 > select add #26/D:264
    11060 
    11061 42 atoms, 22 bonds, 5 residues, 1 model selected 
    11062 
    11063 > select subtract #26/D:264
    11064 
    11065 33 atoms, 14 bonds, 4 residues, 1 model selected 
    11066 
    11067 > select add #26/E:230
    11068 
    11069 40 atoms, 20 bonds, 5 residues, 1 model selected 
    11070 
    11071 > select up
    11072 
    11073 42 atoms, 36 bonds, 6 residues, 1 model selected 
    11074 
    11075 > select up
    11076 
    11077 46 atoms, 40 bonds, 6 residues, 1 model selected 
    11078 
    11079 > label sel attribute name
    11080 
    11081 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11082 
    11083 > select clear
    11084 
    11085 [Repeated 1 time(s)]
    11086 
    11087 > ui mousemode right label
    11088 
    11089 > label delete residues
    11090 
    11091 > ui mousemode right label
    11092 
    11093 > undo
    11094 
    11095 [Repeated 2 time(s)]
    11096 
    11097 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11098 
    11099 > label delete residues
    11100 
    11101 > ui mousemode right label
    11102 
    11103 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11104 
    11105 > ui mousemode right distance
    11106 
    11107 > ui mousemode right "move label"
    11108 
    11109 > ui mousemode right distance
    11110 
    11111 > ui mousemode right "move label"
    11112 
    11113 [Repeated 1 time(s)]
    11114 
    11115 > style sel stick
    11116 
    11117 Changed 46 atom styles 
    11118 
    11119 > ui mousemode right select
    11120 
    11121 > select #26/C:250
    11122 
    11123 6 atoms, 5 bonds, 1 residue, 1 model selected 
    11124 
    11125 > select #26/C:249
    11126 
    11127 11 atoms, 10 bonds, 1 residue, 1 model selected 
    11128 
    11129 > select #26/E:230
    11130 
    11131 7 atoms, 6 bonds, 1 residue, 1 model selected 
    11132 
    11133 > select #26/C:250
    11134 
    11135 6 atoms, 5 bonds, 1 residue, 1 model selected 
    11136 
    11137 > select #26/C:250@CB
    11138 
    11139 1 atom, 1 residue, 1 model selected 
    11140 
    11141 > select clear
    11142 
    11143 > save "/Users/mimbert/OneDrive - Institut Pasteur Paris/Papers/FigG_3.tif"
    11144 > width 2000 height 1526 supersample 4 transparentBackground true
    11145 
    11146 > rename #26 G3
    11147 
    11148 > hide #!26 models
    11149 
    11150 > show #!25 models
    11151 
    11152 > view 1
    11153 
    11154 > select #25/C:218
    11155 
    11156 8 atoms, 7 bonds, 1 residue, 1 model selected 
    11157 
    11158 > select add #25/D:94
    11159 
    11160 17 atoms, 18 bonds, 2 residues, 1 model selected 
    11161 
    11162 > select add #25/F:80
    11163 
    11164 26 atoms, 26 bonds, 3 residues, 1 model selected 
    11165 
    11166 > select add #25/D:101
    11167 
    11168 37 atoms, 37 bonds, 4 residues, 1 model selected 
    11169 
    11170 > select add #25/F:86
    11171 
    11172 48 atoms, 48 bonds, 5 residues, 1 model selected 
    11173 
    11174 > select add #25/E:190
    11175 
    11176 53 atoms, 52 bonds, 6 residues, 1 model selected 
    11177 
    11178 > select add #25/F:87
    11179 
    11180 60 atoms, 59 bonds, 7 residues, 1 model selected 
    11181 
    11182 > select add #25/F:88
    11183 
    11184 67 atoms, 67 bonds, 8 residues, 1 model selected 
    11185 
    11186 > select add #25/E:189@CB
    11187 
    11188 68 atoms, 69 bonds, 9 residues, 1 model selected 
    11189 
    11190 > select add #25/C:202
    11191 
    11192 77 atoms, 78 bonds, 10 residues, 1 model selected 
    11193 
    11194 > select add #25/C:201@CG
    11195 
    11196 78 atoms, 78 bonds, 11 residues, 1 model selected 
    11197 
    11198 > select add #25/C:198
    11199 
    11200 86 atoms, 86 bonds, 12 residues, 1 model selected 
    11201 
    11202 > select add #25/E:182
    11203 
    11204 90 atoms, 89 bonds, 13 residues, 1 model selected 
    11205 
    11206 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11207 
    11208 > ui mousemode right label
    11209 
    11210 > label delete residues
    11211 
    11212 > label #25/C:202
    11213 
    11214 > select up
    11215 
    11216 106 atoms, 88 bonds, 22 residues, 1 model selected 
    11217 
    11218 > select up
    11219 
    11220 193 atoms, 185 bonds, 22 residues, 1 model selected 
    11221 
    11222 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11223 
    11224 > ui mousemode right select
    11225 
    11226 > ui mousemode right "move label"
    11227 
    11228 > ui mousemode right select
    11229 
    11230 > select clear
    11231 
    11232 > ui mousemode right "move label"
    11233 
    11234 > ui mousemode right label
    11235 
    11236 > label delete residues
    11237 
    11238 > label #25/E:203
    11239 
    11240 > label delete residues
    11241 
    11242 > ui mousemode right select
    11243 
    11244 > select add #25/C:218
    11245 
    11246 8 atoms, 7 bonds, 1 residue, 1 model selected 
    11247 
    11248 > select add #25/E:199
    11249 
    11250 18 atoms, 17 bonds, 2 residues, 1 model selected 
    11251 
    11252 > select #25/F:86@CE2
    11253 
    11254 1 atom, 1 residue, 1 model selected 
    11255 
    11256 > select add #25/E:203
    11257 
    11258 9 atoms, 7 bonds, 2 residues, 1 model selected 
    11259 
    11260 > select clear
    11261 
    11262 > select add #25/C:218
    11263 
    11264 8 atoms, 7 bonds, 1 residue, 1 model selected 
    11265 
    11266 > select add #25/C:214
    11267 
    11268 18 atoms, 17 bonds, 2 residues, 1 model selected 
    11269 
    11270 > select add #25/D:101
    11271 
    11272 29 atoms, 28 bonds, 3 residues, 1 model selected 
    11273 
    11274 > select add #25/C:201@CB
    11275 
    11276 30 atoms, 28 bonds, 4 residues, 1 model selected 
    11277 
    11278 > select add #25/C:204
    11279 
    11280 38 atoms, 35 bonds, 5 residues, 1 model selected 
    11281 
    11282 > label sel atoms attribute name
    11283 
    11284 > undo
    11285 
    11286 > ui mousemode right label
    11287 
    11288 > label delete residues
    11289 
    11290 [Repeated 2 time(s)]
    11291 
    11292 > label delete atoms
    11293 
    11294 > label sel attribute name
    11295 
    11296 > label delete residues
    11297 
    11298 > label sel attribute name
    11299 
    11300 > ui mousemode right select
    11301 
    11302 > select clear
    11303 
    11304 > ui mousemode right "move label"
    11305 
    11306 > ui mousemode right select
    11307 
    11308 > select #25/E:189
    11309 
    11310 7 atoms, 6 bonds, 1 residue, 1 model selected 
    11311 
    11312 > label sel attribute name
    11313 
    11314 > select clear
    11315 
    11316 > select #25/D:93
    11317 
    11318 11 atoms, 10 bonds, 1 residue, 1 model selected 
    11319 
    11320 > select #25/F:79
    11321 
    11322 5 atoms, 4 bonds, 1 residue, 1 model selected 
    11323 
    11324 > select #25/C:205
    11325 
    11326 12 atoms, 12 bonds, 1 residue, 1 model selected 
    11327 
    11328 > select #25/E:190
    11329 
    11330 5 atoms, 4 bonds, 1 residue, 1 model selected 
    11331 
    11332 > select #25/F:80
    11333 
    11334 9 atoms, 8 bonds, 1 residue, 1 model selected 
    11335 
    11336 > select add #25/D:94
    11337 
    11338 18 atoms, 16 bonds, 2 residues, 1 model selected 
    11339 
    11340 > select clear
    11341 
    11342 > select add #25/F:79
    11343 
    11344 5 atoms, 4 bonds, 1 residue, 1 model selected 
    11345 
    11346 > select add #25/D:93
    11347 
    11348 16 atoms, 14 bonds, 2 residues, 1 model selected 
    11349 
    11350 > select add #25/C:205@CA
    11351 
    11352 17 atoms, 14 bonds, 3 residues, 1 model selected 
    11353 
    11354 > select add #25/D:102
    11355 
    11356 25 atoms, 22 bonds, 4 residues, 1 model selected 
    11357 
    11358 > select add #25/F:87
    11359 
    11360 32 atoms, 28 bonds, 5 residues, 1 model selected 
    11361 
    11362 > select add #25/E:191
    11363 
    11364 44 atoms, 40 bonds, 6 residues, 1 model selected 
    11365 
    11366 > select add #25/C:202
    11367 
    11368 53 atoms, 51 bonds, 7 residues, 1 model selected 
    11369 
    11370 > select add #25/E:187
    11371 
    11372 61 atoms, 58 bonds, 8 residues, 1 model selected 
    11373 
    11374 > select up
    11375 
    11376 69 atoms, 58 bonds, 12 residues, 1 model selected 
    11377 
    11378 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11379 
    11380 > view 1
    11381 
    11382 > select clear
    11383 
    11384 > ui mousemode right "move label"
    11385 
    11386 > save "/Users/mimbert/OneDrive - Institut Pasteur
    11387 > Paris/Papers/figG_2_annoté.tif" width 2000 height 1526 supersample 4
    11388 > transparentBackground true
    11389 
    11390 > hide #!25 models
    11391 
    11392 > show #!24 models
    11393 
    11394 > ui mousemode right select
    11395 
    11396 > select #24/D:133
    11397 
    11398 9 atoms, 8 bonds, 1 residue, 1 model selected 
    11399 
    11400 > select add #24/C:182
    11401 
    11402 20 atoms, 18 bonds, 2 residues, 1 model selected 
    11403 
    11404 > select add #24/D:111
    11405 
    11406 31 atoms, 28 bonds, 3 residues, 1 model selected 
    11407 
    11408 > select up
    11409 
    11410 33 atoms, 29 bonds, 4 residues, 1 model selected 
    11411 
    11412 > select up
    11413 
    11414 38 atoms, 36 bonds, 4 residues, 1 model selected 
    11415 
    11416 > label sel attribute name
    11417 
    11418 > select clear
    11419 
    11420 > select add #24/D:336
    11421 
    11422 10 atoms, 10 bonds, 1 residue, 1 model selected 
    11423 
    11424 > select add #24/F:93
    11425 
    11426 20 atoms, 21 bonds, 2 residues, 1 model selected 
    11427 
    11428 > select add #24/D:108
    11429 
    11430 28 atoms, 28 bonds, 3 residues, 1 model selected 
    11431 
    11432 > select up
    11433 
    11434 30 atoms, 28 bonds, 4 residues, 1 model selected 
    11435 
    11436 > select up
    11437 
    11438 34 atoms, 32 bonds, 4 residues, 1 model selected 
    11439 
    11440 > label sel text "{0.name} {0.number}{0.insertion_code}"
    11441 
    11442 > ui mousemode right "move label"
    11443 
    11444 > save "/Users/mimbert/OneDrive - Institut Pasteur
    11445 > Paris/Papers/Fig_1_annoté.tif" width 2000 height 1526 supersample 4
    11446 > transparentBackground true
    11447 
    11448 > ui mousemode right select
    11449 
    11450 > select clear
    11451 
    11452 > save "/Users/mimbert/OneDrive - Institut Pasteur
    11453 > Paris/Papers/Fig_1_annoté.tif" width 2000 height 1526 supersample 4
    11454 > transparentBackground true
    11455 
    11456 > hide #!24 models
    11457 
    11458 > show #!23 models
    11459 
    11460 > hide #!23 models
    11461 
    11462 > show #!23 models
    11463 
    11464 > rename #23 FigG_Rad51
    11465 
    11466 > hide #!23 models
    11467 
    11468 > show #!22 models
    11469 
    11470 > rename #22 figG_RadA
    11471 
    11472 > hide #!22 models
    11473 
    11474 > show #!21 models
    11475 
    11476 > show #!20 models
    11477 
    11478 > hide #!21 models
    11479 
    11480 > hide #!20 models
    11481 
    11482 > show #!21 models
    11483 
    11484 > show #!22 models
    11485 
    11486 > hide #!22 models
    11487 
    11488 > show #!22 models
    11489 
    11490 > hide #!21 models
    11491 
    11492 > show #!21 models
    11493 
    11494 > hide #!21 models
    11495 
    11496 > show #!21 models
    11497 
    11498 > hide #!21 models
    11499 
    11500 > hide #!22 models
    11501 
    11502 > show #!20 models
    11503 
    11504 > hide #!20 models
    11505 
    11506 > show #!19 models
    11507 
    11508 > hide #!19 models
    11509 
    11510 > show #!19 models
    11511 
    11512 > show #!8 models
    11513 
    11514 > select #8/W:17
    11515 
    11516 21 atoms, 23 bonds, 1 residue, 1 model selected 
     3463[deleted to fit within ticket limits]
    115173464
    115183465> select up