Changes between Version 4 and Version 5 of Ticket #15688, comment 2


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Timestamp:
Jul 26, 2024, 1:28:34 PM (15 months ago)
Author:
Tom Goddard

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  • Ticket #15688, comment 2

    v4 v5  
    88
    99Extra chain trimming but no sequence or ligand trimming 162 seconds.
     10
     11Trimming chains but using Python instead of the deleting command, took 328 seconds.  PDB 8j07 with hundreds of chains took the most time.  The Python code looped through chains and did chain.residues.delete().  Maybe that caused a lot of costly chain recomputations.  Try deleting all the extra chain residues as a single collection.  That took 57 seconds.