Changes between Initial Version and Version 1 of Ticket #15564


Ignore:
Timestamp:
Jul 8, 2024, 10:36:36 AM (16 months ago)
Author:
Eric Pettersen
Comment:

Reported by Fran

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #15564

    • Property Component Unassigned → Volume Data
    • Property Owner set to Tom Goddard
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → Fitmap: Tried to get the position of deleted drawing

  • Ticket #15564 – Description

    initial v1  
    284628463 models tiled 
    28472847
    2848 > fitmap #13 inMap #10 search 50
    2849 
    2850 Found 45 unique fits from 50 random placements having fraction of points
    2851 inside contour >= 0.100 (50 of 50). 
    2852  
    2853 Average map values and times found: 
    2854 0.5647 (1), 0.5443 (1), 0.5439 (1), 0.543 (1), 0.5394 (1), 0.5355 (1), 0.519
    2855 (1), 0.5069 (1), 0.503 (2), 0.503 (3), 0.5029 (1), 0.4963 (2), 0.4848 (1),
    2856 0.4819 (1), 0.481 (1), 0.4797 (1), 0.4797 (1), 0.4627 (2), 0.4596 (1), 0.4552
    2857 (1), 0.4517 (1), 0.4491 (1), 0.4474 (1), 0.4417 (1), 0.4389 (1), 0.4379 (1),
    2858 0.4331 (1), 0.4313 (1), 0.4307 (1), 0.4299 (1), 0.4247 (1), 0.4243 (1), 0.4066
    2859 (1), 0.4023 (1), 0.4021 (1), 0.3929 (1), 0.3805 (1), 0.3787 (1), 0.3681 (1),
    2860 0.365 (1), 0.3646 (1), 0.3587 (1), 0.3498 (1), 0.3292 (1), 0.3138 (1) 
    2861  
    2862 Best fit found: 
    2863 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    2864 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    2865 average map value = 0.5647, steps = 416 
    2866 shifted from previous position = 52.2 
    2867 rotated from previous position = 79.1 degrees 
    2868 atoms outside contour = 7436, contour level = 0.41421 
    2869 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    2870 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    2871 Matrix rotation and translation 
    2872 0.42358156 0.04446216 0.90476609 186.25914829 
    2873 0.68046249 -0.67491910 -0.28540308 174.18605245 
    2874 0.59795435 0.73655089 -0.31613815 231.92713127 
    2875 Axis 0.82270775 0.24699391 0.51200193 
    2876 Axis point 0.00000000 44.18438715 78.40138422 
    2877 Rotation angle (degrees) 141.60409636 
    2878 Shift along axis 315.00687577 
    2879  
    2880 Found 45 fits. 
    2881 
    2882 > ui tool show "Fit in Map"
    2883 
    2884 > ui tool show "Volume Viewer"
    2885 
    2886 > ui mousemode right "rotate selected models"
    2887 
    2888 [Repeated 1 time(s)]
    2889 
    2890 > view matrix models
    2891 > #3,-0.54144,-0.36276,-0.75845,598.6,0.711,-0.67901,-0.1828,177.68,-0.44869,-0.63824,0.62557,120.81
    2892 
    2893 Drag select of 10 cryosparc_P12_J2768_004_volume_map.mrc , 17 residues, 12
    2894 shapes 
    2895 
    2896 > ui mousemode right "rotate selected models"
    2897 
    2898 [Repeated 2 time(s)]
    2899 
    2900 > tile
    2901 
    2902 3 models tiled 
    2903 
    2904 > select #13:63-68.
    2905 
    2906 Expected an objects specifier or a keyword 
    2907 
    2908 > select #13:63-68
    2909 
    2910 189 atoms, 203 bonds, 6 residues, 1 model selected 
    2911 
    2912 > color sel magenta
    2913 
    2914 > select clear
    2915 
    2916 > fitmap #11 inMap #3
    2917 
    2918 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#11) to map
    2919 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) using 10778 atoms 
    2920 average map value = 0, steps = 24 
    2921 shifted from previous position = 0 
    2922 rotated from previous position = 0 degrees 
    2923 atoms outside contour = 10778, contour level = 0.2754 
    2924  
    2925 Position of Kendall_Fran_SHAPE_MaP.pdb (#11) relative to
    2926 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    2927 Matrix rotation and translation 
    2928 -0.80903330 0.05748218 -0.58494521 160.06230711 
    2929 -0.21902580 0.89404195 0.39078989 329.31211276 
    2930 0.54542895 0.44428012 -0.71071966 -312.79919237 
    2931 Axis 0.04591709 -0.97033594 -0.23736002 
    2932 Axis point 148.96047146 0.00000000 -168.36839437 
    2933 Rotation angle (degrees) 144.37586887 
    2934 Shift along axis -237.94776113 
    2935  
    2936 
    2937 > fitmap #11 inMap #3
    2938 
    2939 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#11) to map
    2940 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) using 10778 atoms 
    2941 average map value = 0, steps = 24 
    2942 shifted from previous position = 0 
    2943 rotated from previous position = 0 degrees 
    2944 atoms outside contour = 10778, contour level = 0.2754 
    2945  
    2946 Position of Kendall_Fran_SHAPE_MaP.pdb (#11) relative to
    2947 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    2948 Matrix rotation and translation 
    2949 -0.80903330 0.05748218 -0.58494521 160.06230711 
    2950 -0.21902580 0.89404195 0.39078989 329.31211276 
    2951 0.54542895 0.44428012 -0.71071966 -312.79919237 
    2952 Axis 0.04591709 -0.97033594 -0.23736002 
    2953 Axis point 148.96047146 0.00000000 -168.36839437 
    2954 Rotation angle (degrees) 144.37586887 
    2955 Shift along axis -237.94776113 
    2956  
    2957 
    2958 > ~tile
    2959 
    2960 [Repeated 2 time(s)]
    2961 
    2962 > fitmap #13 inMap #10
    2963 
    2964 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    2965 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    2966 average map value = 0, steps = 24 
    2967 shifted from previous position = 0 
    2968 rotated from previous position = 0 degrees 
    2969 atoms outside contour = 10778, contour level = 0.41421 
    2970  
    2971 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    2972 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    2973 Matrix rotation and translation 
    2974 1.00000000 0.00000000 0.00000000 -0.00000000 
    2975 -0.00000000 1.00000000 0.00000000 0.00000000 
    2976 0.00000000 0.00000000 1.00000000 0.00000000 
    2977 Axis 0.38480103 0.01202503 -0.92292121 
    2978 Axis point 5.23219290 -60.69401641 0.00000000 
    2979 Rotation angle (degrees) 0.00000000 
    2980 Shift along axis -0.00000000 
    2981  
    2982 
    2983 > fitmap #13 inMap #10
    2984 
    2985 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    2986 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    2987 average map value = 0, steps = 24 
    2988 shifted from previous position = 0 
    2989 rotated from previous position = 0 degrees 
    2990 atoms outside contour = 10778, contour level = 0.41421 
    2991  
    2992 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    2993 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    2994 Matrix rotation and translation 
    2995 1.00000000 0.00000000 0.00000000 -0.00000000 
    2996 -0.00000000 1.00000000 -0.00000000 0.00000000 
    2997 0.00000000 0.00000000 1.00000000 0.00000000 
    2998 Axis 0.30212805 0.11329802 -0.94651054 
    2999 Axis point 37.84921264 -19.21552297 0.00000000 
    3000 Rotation angle (degrees) 0.00000000 
    3001 Shift along axis -0.00000000 
    3002  
    3003 
    3004 > fitmap #13 inMap #10
    3005 
    3006 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3007 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3008 average map value = 0, steps = 24 
    3009 shifted from previous position = 0 
    3010 rotated from previous position = 0 degrees 
    3011 atoms outside contour = 10778, contour level = 0.41421 
    3012  
    3013 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3014 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3015 Matrix rotation and translation 
    3016 1.00000000 0.00000000 0.00000000 -0.00000000 
    3017 -0.00000000 1.00000000 -0.00000000 0.00000000 
    3018 0.00000000 0.00000000 1.00000000 0.00000000 
    3019 Axis 0.26357096 0.09883911 -0.95956302 
    3020 Axis point 55.18454281 -76.84118425 0.00000000 
    3021 Rotation angle (degrees) 0.00000000 
    3022 Shift along axis -0.00000000 
    3023  
    3024 
    3025 > fitmap #13 inMap #10
    3026 
    3027 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3028 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3029 average map value = 0, steps = 24 
    3030 shifted from previous position = 0 
    3031 rotated from previous position = 0 degrees 
    3032 atoms outside contour = 10778, contour level = 0.41421 
    3033  
    3034 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3035 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3036 Matrix rotation and translation 
    3037 1.00000000 0.00000000 0.00000000 -0.00000000 
    3038 -0.00000000 1.00000000 -0.00000000 0.00000000 
    3039 0.00000000 0.00000000 1.00000000 0.00000000 
    3040 Axis 0.28280888 0.11489111 -0.95227053 
    3041 Axis point 71.48470647 -23.90666993 0.00000000 
    3042 Rotation angle (degrees) 0.00000000 
    3043 Shift along axis -0.00000000 
    3044  
    3045 
    3046 > fitmap #13 inMap #10
    3047 
    3048 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3049 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3050 average map value = 0, steps = 24 
    3051 shifted from previous position = 0 
    3052 rotated from previous position = 0 degrees 
    3053 atoms outside contour = 10778, contour level = 0.41421 
    3054  
    3055 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3056 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3057 Matrix rotation and translation 
    3058 1.00000000 0.00000000 0.00000000 -0.00000000 
    3059 -0.00000000 1.00000000 -0.00000000 0.00000000 
    3060 -0.00000000 0.00000000 1.00000000 0.00000000 
    3061 Axis 0.26572206 0.11625340 -0.95701460 
    3062 Axis point 67.65645128 -12.48279661 0.00000000 
    3063 Rotation angle (degrees) 0.00000000 
    3064 Shift along axis -0.00000000 
    3065  
    3066 
    3067 > fitmap #13 inMap #10
    3068 
    3069 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3070 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3071 average map value = 0, steps = 24 
    3072 shifted from previous position = 0 
    3073 rotated from previous position = 0 degrees 
    3074 atoms outside contour = 10778, contour level = 0.41421 
    3075  
    3076 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3077 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3078 Matrix rotation and translation 
    3079 1.00000000 0.00000000 0.00000000 -0.00000000 
    3080 -0.00000000 1.00000000 -0.00000000 0.00000000 
    3081 -0.00000000 0.00000000 1.00000000 0.00000000 
    3082 Axis 0.30421656 0.16161505 -0.93879330 
    3083 Axis point 108.84923599 -38.97875546 0.00000000 
    3084 Rotation angle (degrees) 0.00000000 
    3085 Shift along axis -0.00000000 
    3086  
    3087 
    3088 > fitmap #13 inMap #10 search 50
    3089 
    3090 Found 44 unique fits from 50 random placements having fraction of points
    3091 inside contour >= 0.100 (50 of 50). 
    3092  
    3093 Average map values and times found: 
    3094 0.5647 (2), 0.5477 (1), 0.543 (1), 0.5394 (1), 0.5327 (1), 0.5316 (1), 0.5307
    3095 (1), 0.5081 (1), 0.5069 (1), 0.5063 (1), 0.504 (2), 0.4996 (3), 0.497 (1),
    3096 0.4907 (1), 0.4903 (2), 0.4893 (2), 0.4831 (1), 0.4819 (1), 0.4767 (1), 0.4716
    3097 (1), 0.4585 (1), 0.4581 (1), 0.456 (1), 0.4555 (1), 0.4518 (1), 0.4343 (1),
    3098 0.432 (1), 0.4302 (1), 0.4244 (1), 0.419 (1), 0.4171 (1), 0.4157 (1), 0.4096
    3099 (1), 0.3927 (1), 0.3705 (1), 0.367 (1), 0.3637 (1), 0.3564 (1), 0.3381 (1),
    3100 0.3379 (1), 0.2905 (1), 0.288 (1), 0.2754 (1), 0.2397 (1) 
    3101  
    3102 Best fit found: 
    3103 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3104 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3105 average map value = 0.5647, steps = 328 
    3106 shifted from previous position = 68.8 
    3107 rotated from previous position = 9.28 degrees 
    3108 atoms outside contour = 7437, contour level = 0.41421 
    3109 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3110 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3111 Matrix rotation and translation 
    3112 0.42284866 0.04480744 0.90509186 186.30457145 
    3113 0.68094707 -0.67471539 -0.28472829 174.19587242 
    3114 0.59792151 0.73671664 -0.31581400 231.95224663 
    3115 Axis 0.82246929 0.24733411 0.51222076 
    3116 Axis point 0.00000000 44.15756961 78.33191516 
    3117 Rotation angle (degrees) 141.61355435 
    3118 Shift along axis 315.12512638 
    3119  
    3120 Found 44 fits. 
    3121 
    3122 > ui mousemode right "translate selected models"
    3123 
    3124 > ui mousemode right "move picked models"
    3125 
    3126 Drag select of 4 residues, 10 shapes 
    3127 
    3128 > select down
    3129 
    3130 259 atoms, 8 residues, 1 model selected 
    3131 
    3132 > fitmap #13 inMap #10
    3133 
    3134 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3135 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3136 average map value = 0.5316, steps = 60 
    3137 shifted from previous position = 0.00582 
    3138 rotated from previous position = 0.00566 degrees 
    3139 atoms outside contour = 7721, contour level = 0.41421 
    3140  
    3141 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3142 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3143 Matrix rotation and translation 
    3144 0.99808326 0.05311813 -0.03175201 226.92702963 
    3145 0.06131366 -0.77924082 0.62371814 154.50867058 
    3146 0.00838829 -0.62446953 -0.78100412 173.55391971 
    3147 Axis -0.99946178 -0.03214156 0.00656241 
    3148 Axis point 0.00000000 104.31048531 61.72287957 
    3149 Rotation angle (degrees) 141.35964272 
    3150 Shift along axis -230.63211161 
    3151  
    3152 
    3153 > fitmap #13 inMap #10
    3154 
    3155 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3156 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3157 average map value = 0.5316, steps = 64 
    3158 shifted from previous position = 0.0103 
    3159 rotated from previous position = 0.0218 degrees 
    3160 atoms outside contour = 7721, contour level = 0.41421 
    3161  
    3162 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3163 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3164 Matrix rotation and translation 
    3165 0.99810240 0.05296075 -0.03141144 226.91693916 
    3166 0.06097752 -0.77921889 0.62377849 154.48945572 
    3167 0.00855940 -0.62451025 -0.78096970 173.55583236 
    3168 Axis -0.99946715 -0.03200345 0.00641879 
    3169 Axis point 0.00000000 104.31406449 61.70288635 
    3170 Rotation angle (degrees) 141.35617979 
    3171 Shift along axis -230.62620242 
    3172  
    3173 
    3174 > fitmap #13 inMap #10
    3175 
    3176 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3177 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3178 average map value = 0.5316, steps = 44 
    3179 shifted from previous position = 0.0436 
    3180 rotated from previous position = 0.0501 degrees 
    3181 atoms outside contour = 7718, contour level = 0.41421 
    3182  
    3183 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3184 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3185 Matrix rotation and translation 
    3186 0.99805278 0.05359003 -0.03191698 226.91409065 
    3187 0.06178185 -0.77896902 0.62401138 154.54600038 
    3188 0.00857846 -0.62476824 -0.78076312 173.53205624 
    3189 Axis -0.99945314 -0.03241028 0.00655627 
    3190 Axis point 0.00000000 104.31402254 61.69952926 
    3191 Rotation angle (degrees) 141.33752068 
    3192 Shift along axis -230.66115721 
    3193  
    3194 
    3195 > fitmap #13 inMap #10
    3196 
    3197 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3198 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3199 average map value = 0.5316, steps = 80 
    3200 shifted from previous position = 0.0385 
    3201 rotated from previous position = 0.0344 degrees 
    3202 atoms outside contour = 7721, contour level = 0.41421 
    3203  
    3204 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3205 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3206 Matrix rotation and translation 
    3207 0.99808246 0.05313601 -0.03174735 226.92914387 
    3208 0.06132435 -0.77921343 0.62375131 154.51177420 
    3209 0.00840571 -0.62450219 -0.78097782 173.55188085 
    3210 Axis -0.99946155 -0.03215007 0.00655631 
    3211 Axis point 0.00000000 104.31252674 61.71924413 
    3212 Rotation angle (degrees) 141.35721653 
    3213 Shift along axis -230.63665841 
    3214  
    3215 
    3216 > fitmap #13 inMap #10
    3217 
    3218 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    3219 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    3220 average map value = 0.5316, steps = 48 
    3221 shifted from previous position = 0.0503 
    3222 rotated from previous position = 0.0332 degrees 
    3223 atoms outside contour = 7720, contour level = 0.41421 
    3224  
    3225 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    3226 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3227 Matrix rotation and translation 
    3228 0.99808679 0.05329874 -0.03133574 226.88820697 
    3229 0.06119110 -0.77898752 0.62404650 154.49610114 
    3230 0.00885076 -0.62477009 -0.78075859 173.57408552 
    3231 Axis -0.99946270 -0.03216237 0.00631647 
    3232 Axis point 0.00000000 104.31580601 61.69141314 
    3233 Rotation angle (degrees) 141.33660161 
    3234 Shift along axis -230.63888438 
    3235  
    3236 Opened Kendall_Fran_SHAPE_MaP.pdb map 15 as #15, grid size 44,50,38, pixel 5,
    3237 shown at level 0.0344, step 1, values float32 
    3238 Opened Kendall_Fran_SHAPE_MaP.pdb map 15 as #16, grid size 44,50,38, pixel 5,
    3239 shown at level 0.0344, step 1, values float32 
    3240 
    3241 > fitmap #13 inMap #10 resolution 15 metric correlation
    3242 
    3243 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3244 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3245 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    3246 steps = 64, shift = 0.459, angle = 1.58 degrees 
    3247  
    3248 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#16) relative to
    3249 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3250 Matrix rotation and translation 
    3251 0.99667621 0.07851679 -0.02171571 227.52018001 
    3252 0.07470363 -0.77456548 0.62806658 154.57501506 
    3253 0.03249355 -0.62760132 -0.77785651 174.27583736 
    3254 Axis -0.99906481 -0.04313128 -0.00303392 
    3255 Axis point 0.00000000 103.07975871 61.23743975 
    3256 Rotation angle (degrees) 141.06622988 
    3257 Shift along axis -234.50316248 
    3258  
    3259 Average map value = 0.5293 for 10778 atoms, 7660 outside contour 
    3260 
    3261 > fitmap #13 inMap #10 search 50 resolution 15
    3262 
    3263 Found 44 unique fits from 50 random placements having fraction of points
    3264 inside contour >= 0.100 (50 of 50). 
    3265  
    3266 Correlations and times found: 
    3267 0.4819 (1), 0.4674 (1), 0.4673 (2), 0.4643 (1), 0.4572 (1), 0.4555 (2), 0.4473
    3268 (1), 0.447 (1), 0.4461 (1), 0.4374 (1), 0.4373 (1), 0.4355 (1), 0.4324 (1),
    3269 0.4311 (1), 0.4243 (1), 0.4239 (1), 0.4237 (1), 0.422 (1), 0.4218 (1), 0.4197
    3270 (1), 0.4196 (2), 0.4191 (3), 0.417 (1), 0.4144 (1), 0.4127 (1), 0.4123 (1),
    3271 0.4103 (1), 0.409 (1), 0.4078 (1), 0.4069 (1), 0.4045 (1), 0.4012 (1), 0.3991
    3272 (1), 0.3976 (1), 0.3952 (1), 0.3932 (1), 0.3851 (1), 0.3844 (1), 0.3743 (1),
    3273 0.3737 (2), 0.3532 (1), 0.3465 (1), 0.3113 (1), 0.2917 (1) 
    3274  
    3275 Best fit found: 
    3276 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3277 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3278 correlation = 0.4819, correlation about mean = 0.2294, overlap = 224.8 
    3279 steps = 116, shift = 16.2, angle = 37.4 degrees 
    3280 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3281 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3282 Matrix rotation and translation 
    3283 0.43025691 0.03150116 0.90215666 185.84094185 
    3284 0.67333708 -0.67684130 -0.29749453 174.47378155 
    3285 0.60124549 0.73545463 -0.31242657 231.80816919 
    3286 Axis 0.82451846 0.24019267 0.51232489 
    3287 Axis point 0.00000000 45.01425311 79.31605692 
    3288 Rotation angle (degrees) 141.21531976 
    3289 Shift along axis 313.89770550 
    3290  
    3291 Found 44 fits. 
    3292 
    3293 > select down
    3294 
    3295 259 atoms, 8 residues, 1 model selected 
    3296 
    3297 > fitmap #13 inMap #10 resolution 15 metric correlation
    3298 
    3299 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3300 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3301 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3302 steps = 52, shift = 2.45, angle = 2.13 degrees 
    3303  
    3304 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3305 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3306 Matrix rotation and translation 
    3307 0.73627787 -0.31803485 0.59728446 187.78956106 
    3308 -0.67654437 -0.36360354 0.64037509 151.12899856 
    3309 0.01351317 -0.87558345 -0.48287792 151.07131278 
    3310 Axis -0.91127104 0.35091584 -0.21550678 
    3311 Axis point 0.00000000 146.52968517 -6.53719177 
    3312 Rotation angle (degrees) 123.71772480 
    3313 Shift along axis -150.65052018 
    3314  
    3315 Average map value = 0.4814 for 10778 atoms, 7916 outside contour 
    3316 
    3317 > fitmap #13 inMap #10 resolution 15 metric correlation
    3318 
    3319 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3320 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3321 correlation = 0.4336, correlation about mean = 0.1602, overlap = 193.6 
    3322 steps = 36, shift = 0.0213, angle = 0.0842 degrees 
    3323  
    3324 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3325 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3326 Matrix rotation and translation 
    3327 0.73530763 -0.31881637 0.59806255 187.70547872 
    3328 -0.67760244 -0.36318605 0.63949269 151.12801209 
    3329 0.01332727 -0.87547250 -0.48308422 151.07578743 
    3330 Axis -0.91095144 0.35160243 -0.21573874 
    3331 Axis point 0.00000000 146.59350465 -6.55386102 
    3332 Rotation angle (degrees) 123.74387170 
    3333 Shift along axis -150.44649977 
    3334  
    3335 Average map value = 0.4813 for 10778 atoms, 7917 outside contour 
    3336 
    3337 > fitmap #13 inMap #10 resolution 15 metric correlation
    3338 
    3339 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3340 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3341 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.5 
    3342 steps = 40, shift = 0.0304, angle = 0.106 degrees 
    3343  
    3344 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3345 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3346 Matrix rotation and translation 
    3347 0.73648615 -0.31765406 0.59723031 187.81649224 
    3348 -0.67631167 -0.36379503 0.64051211 151.11961311 
    3349 0.01380817 -0.87564214 -0.48276314 151.07156202 
    3350 Axis -0.91134059 0.35068746 -0.21558442 
    3351 Axis point 0.00000000 146.49566057 -6.54380212 
    3352 Rotation angle (degrees) 123.71319385 
    3353 Shift along axis -150.73771472 
    3354  
    3355 Average map value = 0.4814 for 10778 atoms, 7918 outside contour 
    3356 
    3357 > fitmap #13 inMap #10 resolution 15 metric correlation
    3358 
    3359 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3360 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3361 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3362 steps = 28, shift = 0.0543, angle = 0.0614 degrees 
    3363  
    3364 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3365 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3366 Matrix rotation and translation 
    3367 0.73587489 -0.31847631 0.59754581 187.71319078 
    3368 -0.67698522 -0.36348953 0.63997378 151.11687417 
    3369 0.01338518 -0.87547032 -0.48308656 151.07732699 
    3370 Axis -0.91114375 0.35122002 -0.21554946 
    3371 Axis point 0.00000000 146.54558251 -6.51623496 
    3372 Rotation angle (degrees) 123.73486548 
    3373 Shift along axis -150.52306516 
    3374  
    3375 Average map value = 0.4814 for 10778 atoms, 7921 outside contour 
    3376 
    3377 > fitmap #13 inMap #10 resolution 15 metric correlation
    3378 
    3379 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3380 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3381 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3382 steps = 44, shift = 0.0512, angle = 0.0668 degrees 
    3383  
    3384 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3385 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3386 Matrix rotation and translation 
    3387 0.73659630 -0.31768974 0.59707547 187.81718047 
    3388 -0.67619391 -0.36380829 0.64062891 151.12211223 
    3389 0.01369980 -0.87562369 -0.48279970 151.07342801 
    3390 Axis -0.91137765 0.35065104 -0.21548698 
    3391 Axis point 0.00000000 146.49691423 -6.53108775 
    3392 Rotation angle (degrees) 123.71111604 
    3393 Shift along axis -150.73561033 
    3394  
    3395 Average map value = 0.4814 for 10778 atoms, 7918 outside contour 
    3396 
    3397 > fitmap #13 inMap #10 resolution 15 metric correlation
    3398 
    3399 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3400 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3401 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.5 
    3402 steps = 40, shift = 0.00817, angle = 0.00964 degrees 
    3403  
    3404 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3405 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3406 Matrix rotation and translation 
    3407 0.73664236 -0.31754435 0.59709599 187.82807726 
    3408 -0.67614075 -0.36389029 0.64063845 151.11706223 
    3409 0.01384634 -0.87564235 -0.48276166 151.07050637 
    3410 Axis -0.91139383 0.35057500 -0.21554223 
    3411 Axis point 0.00000000 146.48199336 -6.53681111 
    3412 Rotation angle (degrees) 123.71104361 
    3413 Shift along axis -150.76956168 
    3414  
    3415 Average map value = 0.4814 for 10778 atoms, 7917 outside contour 
    3416 
    3417 > fitmap #13 inMap #10 resolution 15 metric correlation
    3418 
    3419 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3420 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3421 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3422 steps = 28, shift = 0.066, angle = 0.0919 degrees 
    3423  
    3424 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3425 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3426 Matrix rotation and translation 
    3427 0.73568276 -0.31869538 0.59766558 187.68931644 
    3428 -0.67719575 -0.36340825 0.63979717 151.11624241 
    3429 0.01329623 -0.87542434 -0.48317233 151.07867023 
    3430 Axis -0.91108185 0.35137325 -0.21556134 
    3431 Axis point 0.00000000 146.55962081 -6.51202200 
    3432 Rotation angle (degrees) 123.74163902 
    3433 Shift along axis -150.46884643 
    3434  
    3435 Average map value = 0.4813 for 10778 atoms, 7921 outside contour 
    3436 
    3437 > fitmap #13 inMap #10 resolution 15 metric correlation
    3438 
    3439 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3440 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3441 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3442 steps = 40, shift = 0.0119, angle = 0.0671 degrees 
    3443  
    3444 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3445 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3446 Matrix rotation and translation 
    3447 0.73647381 -0.31825210 0.59692708 187.74502013 
    3448 -0.67633444 -0.36382210 0.64047269 151.11005085 
    3449 0.01334351 -0.87541371 -0.48319029 151.07951403 
    3450 Axis -0.91135018 0.35085016 -0.21527893 
    3451 Axis point 0.00000000 146.50539881 -6.46997050 
    3452 Rotation angle (degrees) 123.72926368 
    3453 Shift along axis -150.60870853 
    3454  
    3455 Average map value = 0.4814 for 10778 atoms, 7920 outside contour 
    3456 
    3457 > fitmap #13 inMap #10 resolution 15 metric correlation
    3458 
    3459 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3460 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3461 correlation = 0.4336, correlation about mean = 0.1604, overlap = 193.6 
    3462 steps = 44, shift = 0.00997, angle = 0.0255 degrees 
    3463  
    3464 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3465 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3466 Matrix rotation and translation 
    3467 0.73675689 -0.31797297 0.59672646 187.75637225 
    3468 -0.67602366 -0.36397573 0.64071347 151.10494295 
    3469 0.01346441 -0.87545128 -0.48311887 151.08015725 
    3470 Axis -0.91144404 0.35062860 -0.21524255 
    3471 Axis point 0.00000000 146.47809853 -6.46214978 
    3472 Rotation angle (degrees) 123.72234426 
    3473 Shift along axis -150.66658945 
    3474  
    3475 Average map value = 0.4814 for 10778 atoms, 7921 outside contour 
    3476 
    3477 > fitmap #13 inMap #10 resolution 15 metric correlation
    3478 
    3479 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3480 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3481 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.5 
    3482 steps = 44, shift = 0.0743, angle = 0.0382 degrees 
    3483  
    3484 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3485 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3486 Matrix rotation and translation 
    3487 0.73692687 -0.31734263 0.59685211 187.85537606 
    3488 -0.67582987 -0.36402039 0.64089251 151.11628486 
    3489 0.01388385 -0.87566141 -0.48272602 151.07287370 
    3490 Axis -0.91148853 0.35037916 -0.21546020 
    3491 Axis point 0.00000000 146.46457227 -6.52743834 
    3492 Rotation angle (degrees) 123.70449866 
    3493 Shift along axis -150.83021625 
    3494  
    3495 Average map value = 0.4814 for 10778 atoms, 7915 outside contour 
    3496 
    3497 > fitmap #13 inMap #10 resolution 15 metric correlation
    3498 
    3499 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3500 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3501 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3502 steps = 44, shift = 0.0757, angle = 0.0745 degrees 
    3503  
    3504 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3505 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3506 Matrix rotation and translation 
    3507 0.73627318 -0.31843983 0.59707443 187.72116666 
    3508 -0.67655319 -0.36379025 0.64025971 151.10363443 
    3509 0.01332569 -0.87535867 -0.48329048 151.08252826 
    3510 Axis -0.91128745 0.35098736 -0.21532083 
    3511 Axis point 0.00000000 146.51172206 -6.46351587 
    3512 Rotation angle (degrees) 123.73852907 
    3513 Shift along axis -150.56369165 
    3514  
    3515 Average map value = 0.4814 for 10778 atoms, 7919 outside contour 
    3516 
    3517 > fitmap #13 inMap #10 resolution 15 metric correlation
    3518 
    3519 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3520 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3521 correlation = 0.4336, correlation about mean = 0.1604, overlap = 193.6 
    3522 steps = 40, shift = 0.0286, angle = 0.06 degrees 
    3523  
    3524 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3525 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3526 Matrix rotation and translation 
    3527 0.73692848 -0.31777103 0.59662216 187.79573854 
    3528 -0.67583587 -0.36398700 0.64090515 151.11255955 
    3529 0.01350165 -0.87551992 -0.48299343 151.07299732 
    3530 Axis -0.91149603 0.35050333 -0.21522638 
    3531 Axis point 0.00000000 146.47467228 -6.47904509 
    3532 Rotation angle (degrees) 123.71250255 
    3533 Shift along axis -150.72451093 
    3534  
    3535 Average map value = 0.4814 for 10778 atoms, 7919 outside contour 
    3536 
    3537 > fitmap #13 inMap #10 resolution 15 metric correlation
    3538 
    3539 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3540 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3541 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.5 
    3542 steps = 48, shift = 0.0419, angle = 0.0304 degrees 
    3543  
    3544 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3545 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3546 Matrix rotation and translation 
    3547 0.73674725 -0.31745965 0.59701161 187.83840647 
    3548 -0.67602691 -0.36388000 0.64076441 151.12176707 
    3549 0.01382376 -0.87567734 -0.48269885 151.07134650 
    3550 Axis -0.91142552 0.35051283 -0.21550933 
    3551 Axis point 0.00000000 146.48247879 -6.53958243 
    3552 Rotation angle (degrees) 123.70491410 
    3553 Shift along axis -150.78788505 
    3554  
    3555 Average map value = 0.4814 for 10778 atoms, 7918 outside contour 
    3556 
    3557 > fitmap #13 inMap #10 resolution 15 metric correlation
    3558 
    3559 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3560 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3561 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3562 steps = 36, shift = 0.0124, angle = 0.0395 degrees 
    3563  
    3564 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3565 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3566 Matrix rotation and translation 
    3567 0.73628708 -0.31779179 0.59740247 187.79800374 
    3568 -0.67652973 -0.36364936 0.64036454 151.12361183 
    3569 0.01374245 -0.87565267 -0.48274591 151.07431668 
    3570 Axis -0.91127143 0.35083553 -0.21563583 
    3571 Axis point 0.00000000 146.51523211 -6.55326439 
    3572 Rotation angle (degrees) 123.71443917 
    3573 Shift along axis -150.69245926 
    3574  
    3575 Average map value = 0.4814 for 10778 atoms, 7917 outside contour 
    3576 
    3577 > fitmap #13 inMap #10 resolution 15 metric correlation
    3578 
    3579 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3580 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3581 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.6 
    3582 steps = 44, shift = 0.0542, angle = 0.0406 degrees 
    3583  
    3584 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3585 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3586 Matrix rotation and translation 
    3587 0.73635143 -0.31837622 0.59701186 187.73012438 
    3588 -0.67646914 -0.36373072 0.64038233 151.11222304 
    3589 0.01326907 -0.87540655 -0.48320532 151.07653162 
    3590 Axis -0.91130838 0.35095237 -0.21528927 
    3591 Axis point 0.00000000 146.51722722 -6.47391077 
    3592 Rotation angle (degrees) 123.73084908 
    3593 Shift along axis -150.57200005 
    3594  
    3595 Average map value = 0.4814 for 10778 atoms, 7920 outside contour 
    3596 
    3597 > fitmap #13 inMap #10 resolution 15 metric correlation
    3598 
    3599 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3600 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3601 correlation = 0.4336, correlation about mean = 0.1603, overlap = 193.5 
    3602 steps = 44, shift = 0.0645, angle = 0.0479 degrees 
    3603  
    3604 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3605 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3606 Matrix rotation and translation 
    3607 0.73662624 -0.31759271 0.59709015 187.82829449 
    3608 -0.67616009 -0.36381181 0.64066260 151.12350913 
    3609 0.01375870 -0.87565742 -0.48273684 151.07204354 
    3610 Axis -0.91138554 0.35061190 -0.21551725 
    3611 Axis point 0.00000000 146.49425512 -6.54023692 
    3612 Rotation angle (degrees) 123.70804112 
    3613 Shift along axis -150.75692254 
    3614  
    3615 Average map value = 0.4814 for 10778 atoms, 7918 outside contour 
    3616 
    3617 > fitmap #13 inMap #10 resolution 15 metric correlation
    3618 
    3619 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3620 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3621 correlation = 0.4239, correlation about mean = 0.1689, overlap = 185.4 
    3622 steps = 68, shift = 0.625, angle = 2.15 degrees 
    3623  
    3624 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3625 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3626 Matrix rotation and translation 
    3627 -0.74634262 -0.45225469 0.48830153 144.04440579 
    3628 -0.56060131 0.03171148 -0.82747840 193.15425012 
    3629 0.35874622 -0.89132488 -0.27720218 174.69206869 
    3630 Axis -0.35361327 0.71754116 -0.60007695 
    3631 Axis point 124.79785725 0.00000000 163.76446661 
    3632 Rotation angle (degrees) 174.82044143 
    3633 Shift along axis -17.16857084 
    3634  
    3635 Average map value = 0.4632 for 10778 atoms, 8013 outside contour 
    3636 
    3637 > fitmap #13 inMap #10 resolution 15 metric correlation
    3638 
    3639 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3640 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3641 correlation = 0.4239, correlation about mean = 0.1689, overlap = 185.4 
    3642 steps = 84, shift = 0.00953, angle = 0.00346 degrees 
    3643  
    3644 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3645 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3646 Matrix rotation and translation 
    3647 -0.74634416 -0.45221854 0.48833265 144.04671200 
    3648 -0.56060575 0.03166776 -0.82747707 193.14803377 
    3649 0.35873606 -0.89134478 -0.27715135 174.68221085 
    3650 Axis -0.35361044 0.71752543 -0.60009742 
    3651 Axis point 124.79960014 0.00000000 163.75987084 
    3652 Rotation angle (degrees) 174.81867298 
    3653 Shift along axis -17.17414043 
    3654  
    3655 Average map value = 0.4632 for 10778 atoms, 8015 outside contour 
    3656 
    3657 > fitmap #13 inMap #10 resolution 15 metric correlation
    3658 
    3659 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3660 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3661 correlation = 0.4239, correlation about mean = 0.1687, overlap = 185.4 
    3662 steps = 48, shift = 0.0577, angle = 0.0439 degrees 
    3663  
    3664 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3665 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3666 Matrix rotation and translation 
    3667 -0.74620034 -0.45202461 0.48873182 144.03443713 
    3668 -0.56068971 0.03094272 -0.82744761 193.07583810 
    3669 0.35890399 -0.89146860 -0.27653500 174.64210672 
    3670 Axis -0.35370143 0.71726927 -0.60034998 
    3671 Axis point 124.81403977 0.00000000 163.76343249 
    3672 Rotation angle (degrees) 174.80754372 
    3673 Shift along axis -17.30420682 
    3674  
    3675 Average map value = 0.4631 for 10778 atoms, 8013 outside contour 
    3676 
    3677 > fitmap #13 inMap #10 resolution 15 metric correlation
    3678 
    3679 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3680 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3681 correlation = 0.4232, correlation about mean = 0.1703, overlap = 176.9 
    3682 steps = 52, shift = 0.651, angle = 2.04 degrees 
    3683  
    3684 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3685 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3686 Matrix rotation and translation 
    3687 -0.30284573 0.63895092 -0.70712527 226.87703411 
    3688 0.94881014 0.13231360 -0.28679673 229.85956770 
    3689 -0.08968676 -0.75778279 -0.64631374 184.40566180 
    3690 Axis -0.56330998 -0.73847040 0.37059862 
    3691 Axis point -14.17989783 0.00000000 164.37988785 
    3692 Rotation angle (degrees) 155.28831719 
    3693 Shift along axis -229.20610088 
    3694  
    3695 Average map value = 0.4474 for 10778 atoms, 8068 outside contour 
    3696 
    3697 > select down
    3698 
    3699 259 atoms, 8 residues, 1 model selected 
    3700 
    3701 > fitmap #13 inMap #10 search 200 resolution 15
    3702 
    3703 Found 113 unique fits from 200 random placements having fraction of points
    3704 inside contour >= 0.100 (199 of 200). 
    3705  
    3706 Correlations and times found: 
    3707 0.4818 (3), 0.4674 (3), 0.4673 (2), 0.4642 (6), 0.4632 (1), 0.4618 (2), 0.4603
    3708 (2), 0.4597 (3), 0.4572 (5), 0.4572 (2), 0.4555 (1), 0.4552 (3), 0.4515 (1),
    3709 0.45 (3), 0.4473 (3), 0.447 (4), 0.4416 (6), 0.4411 (1), 0.44 (2), 0.4396 (6),
    3710 0.4375 (1), 0.4373 (1), 0.4365 (1), 0.4359 (1), 0.4354 (3), 0.435 (3), 0.4349
    3711 (1), 0.4344 (1), 0.4342 (1), 0.4331 (1), 0.4316 (3), 0.4315 (1), 0.4311 (2),
    3712 0.4298 (2), 0.4244 (2), 0.4243 (1), 0.4238 (1), 0.4238 (1), 0.4211 (1), 0.4209
    3713 (1), 0.4203 (2), 0.4197 (1), 0.4191 (1), 0.4168 (1), 0.4163 (1), 0.4154 (3),
    3714 0.4152 (1), 0.4152 (2), 0.4143 (2), 0.4142 (1), 0.4142 (2), 0.4128 (3), 0.4123
    3715 (3), 0.4112 (2), 0.4104 (1), 0.4102 (3), 0.4097 (1), 0.4095 (1), 0.4094 (2),
    3716 0.4091 (2), 0.409 (1), 0.4086 (1), 0.4079 (3), 0.4075 (1), 0.4073 (3), 0.407
    3717 (1), 0.4069 (6), 0.4053 (2), 0.4045 (3), 0.4044 (1), 0.4041 (2), 0.4023 (2),
    3718 0.4012 (1), 0.3999 (1), 0.3992 (3), 0.3978 (1), 0.3976 (1), 0.3975 (1), 0.3973
    3719 (1), 0.3965 (1), 0.3953 (2), 0.3945 (2), 0.3939 (1), 0.3937 (1), 0.3936 (2),
    3720 0.3926 (1), 0.3906 (1), 0.3871 (1), 0.3861 (2), 0.3857 (1), 0.3852 (3), 0.3851
    3721 (1), 0.3843 (1), 0.3838 (1), 0.3801 (1), 0.3794 (1), 0.3785 (1), 0.3781 (1),
    3722 0.3762 (2), 0.3747 (1), 0.3743 (1), 0.3702 (1), 0.3687 (1), 0.3687 (1), 0.3667
    3723 (1), 0.3647 (1), 0.3642 (1), 0.3632 (1), 0.3572 (1), 0.3572 (1), 0.3258 (1),
    3724 0.3045 (1), 0.2903 (1) 
    3725  
    3726 Best fit found: 
    3727 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3728 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3729 correlation = 0.4818, correlation about mean = 0.2293, overlap = 224.8 
    3730 steps = 312, shift = 38.5, angle = 80.1 degrees 
    3731 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3732 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3733 Matrix rotation and translation 
    3734 0.42974315 0.03184233 0.90238957 185.89346305 
    3735 0.67365314 -0.67677410 -0.29693139 174.48638300 
    3736 0.60125889 0.73550178 -0.31228972 231.83095547 
    3737 Axis 0.82436026 0.24044187 0.51246255 
    3738 Axis point 0.00000000 44.99841768 79.26089711 
    3739 Rotation angle (degrees) 141.22948677 
    3740 Shift along axis 314.00169833 
    3741  
    3742 Found 113 fits. 
    3743 
    3744 > fitmap #13 inMap #10 resolution 15 metric correlation
    3745 
    3746 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3747 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3748 correlation = 0.4821, correlation about mean = 0.2307, overlap = 224.8 
    3749 steps = 48, shift = 0.265, angle = 1.13 degrees 
    3750  
    3751 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3752 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3753 Matrix rotation and translation 
    3754 0.41389192 0.04019746 0.90943811 185.79210923 
    3755 0.68403797 -0.67291281 -0.28156773 174.47856525 
    3756 0.60065424 0.73862880 -0.30600977 231.86511271 
    3757 Axis 0.81926214 0.24796687 0.51703190 
    3758 Axis point 0.00000000 44.45253499 77.83124765 
    3759 Rotation angle (degrees) 141.49145677 
    3760 Shift along axis 315.35900325 
    3761  
    3762 Average map value = 0.5642 for 10778 atoms, 7419 outside contour 
    3763 
    3764 > fitmap #13 inMap #10 resolution 15 metric correlation
    3765 
    3766 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3767 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3768 correlation = 0.4821, correlation about mean = 0.2307, overlap = 224.8 
    3769 steps = 56, shift = 0.0424, angle = 0.0957 degrees 
    3770  
    3771 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3772 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3773 Matrix rotation and translation 
    3774 0.41255411 0.04097854 0.91001094 185.81495611 
    3775 0.68454955 -0.67303264 -0.28003384 174.46994619 
    3776 0.60099168 0.73847668 -0.30571423 231.84535713 
    3777 Axis 0.81886954 0.24844756 0.51742293 
    3778 Axis point 0.00000000 44.43408372 77.68090357 
    3779 Rotation angle (degrees) 141.54495777 
    3780 Shift along axis 315.46694396 
    3781  
    3782 Average map value = 0.5642 for 10778 atoms, 7415 outside contour 
    3783 
    3784 > fitmap #13 inMap #10 resolution 15 metric correlation
    3785 
    3786 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3787 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3788 correlation = 0.4561, correlation about mean = 0.2275, overlap = 208.4 
    3789 steps = 100, shift = 0.898, angle = 0.963 degrees 
    3790  
    3791 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3792 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3793 Matrix rotation and translation 
    3794 -0.15560500 0.54498592 -0.82387954 233.65146427 
    3795 0.92291063 0.37755165 0.07543682 221.94783907 
    3796 0.35216909 -0.74862883 -0.56172218 186.42637228 
    3797 Axis -0.55495447 -0.79199205 0.25450765 
    3798 Axis point -31.69496999 0.00000000 154.27028639 
    3799 Rotation angle (degrees) 132.05840241 
    3800 Shift along axis -257.99990942 
    3801  
    3802 Average map value = 0.5343 for 10778 atoms, 7746 outside contour 
    3803 
    3804 > fitmap #13 inMap #10 resolution 15 metric correlation
    3805 
    3806 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3807 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3808 correlation = 0.4561, correlation about mean = 0.2275, overlap = 208.4 
    3809 steps = 44, shift = 0.0042, angle = 0.0017 degrees 
    3810  
    3811 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3812 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3813 Matrix rotation and translation 
    3814 -0.15560134 0.54500816 -0.82386552 233.64971159 
    3815 0.92290800 0.37755450 0.07545477 221.94989750 
    3816 0.35217760 -0.74861120 -0.56174034 186.42489581 
    3817 Axis -0.55495861 -0.79199394 0.25449270 
    3818 Axis point -31.69492092 0.00000000 154.26576571 
    3819 Rotation angle (degrees) 132.05885182 
    3820 Shift along axis -258.00511991 
    3821  
    3822 Average map value = 0.5343 for 10778 atoms, 7746 outside contour 
    3823 
    3824 > fitmap #13 inMap #10 resolution 15 metric correlation
    3825 
    3826 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3827 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3828 correlation = 0.4561, correlation about mean = 0.2276, overlap = 208.4 
    3829 steps = 64, shift = 0.0598, angle = 0.0341 degrees 
    3830  
    3831 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3832 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3833 Matrix rotation and translation 
    3834 -0.15506261 0.54491660 -0.82402764 233.70337727 
    3835 0.92291763 0.37743726 0.07592201 221.92379323 
    3836 0.35238990 -0.74873696 -0.56143951 186.46310094 
    3837 Axis -0.55511444 -0.79189870 0.25444922 
    3838 Axis point -31.75420804 0.00000000 154.29879255 
    3839 Rotation angle (degrees) 132.03098688 
    3840 Shift along axis -258.02789246 
    3841  
    3842 Average map value = 0.5345 for 10778 atoms, 7745 outside contour 
    3843 
    3844 > fitmap #13 inMap #10 resolution 15 metric correlation
    3845 
    3846 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3847 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3848 correlation = 0.4561, correlation about mean = 0.2276, overlap = 208.4 
    3849 steps = 48, shift = 0.00471, angle = 0.0115 degrees 
    3850  
    3851 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3852 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3853 Matrix rotation and translation 
    3854 -0.15491144 0.54482811 -0.82411458 233.70869249 
    3855 0.92291606 0.37741915 0.07603109 221.92239591 
    3856 0.35246051 -0.74881048 -0.56129712 186.45748300 
    3857 Axis -0.55514459 -0.79187243 0.25446521 
    3858 Axis point -31.77758312 0.00000000 154.30544100 
    3859 Rotation angle (degrees) 132.02036406 
    3860 Shift along axis -258.02940140 
    3861  
    3862 Average map value = 0.5345 for 10778 atoms, 7744 outside contour 
    3863 
    3864 > fitmap #13 inMap #10 resolution 15 metric correlation
    3865 
    3866 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3867 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3868 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    3869 steps = 48, shift = 0.478, angle = 0.755 degrees 
    3870  
    3871 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3872 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3873 Matrix rotation and translation 
    3874 0.99664726 0.07883869 -0.02188077 227.57300694 
    3875 0.07506398 -0.77466113 0.62790567 154.58414586 
    3876 0.03255305 -0.62744292 -0.77798180 174.26282844 
    3877 Axis -0.99905670 -0.04332062 -0.00300407 
    3878 Axis point 0.00000000 103.05101010 61.24894608 
    3879 Rotation angle (degrees) 141.07762382 
    3880 Shift along axis -234.57851728 
    3881  
    3882 Average map value = 0.5294 for 10778 atoms, 7660 outside contour 
    3883 
    3884 > fitmap #13 inMap #10 resolution 15 metric correlation
    3885 
    3886 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3887 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3888 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    3889 steps = 44, shift = 0.0153, angle = 0.0398 degrees 
    3890  
    3891 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3892 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3893 Matrix rotation and translation 
    3894 0.99667752 0.07850797 -0.02169041 227.57246917 
    3895 0.07466840 -0.77432707 0.62836472 154.57271347 
    3896 0.03253614 -0.62789658 -0.77761642 174.23775708 
    3897 Axis -0.99906503 -0.04312467 -0.00305349 
    3898 Axis point 0.00000000 103.08929279 61.20112417 
    3899 Rotation angle (degrees) 141.04436197 
    3900 Shift along axis -234.55762743 
    3901  
    3902 Average map value = 0.5293 for 10778 atoms, 7656 outside contour 
    3903 
    3904 > fitmap #13 inMap #10 resolution 15 metric correlation
    3905 
    3906 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3907 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3908 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    3909 steps = 48, shift = 0.0669, angle = 0.0261 degrees 
    3910  
    3911 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3912 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3913 Matrix rotation and translation 
    3914 0.99667214 0.07860229 -0.02159612 227.51472537 
    3915 0.07469678 -0.77459975 0.62802517 154.57334584 
    3916 0.03263584 -0.62754834 -0.77789329 174.28539816 
    3917 Axis -0.99906366 -0.04315254 -0.00310763 
    3918 Axis point 0.00000000 103.07235813 61.23749394 
    3919 Rotation angle (degrees) 141.06965540 
    3920 Shift along axis -234.51354097 
    3921  
    3922 Average map value = 0.5293 for 10778 atoms, 7660 outside contour 
    3923 
    3924 > fitmap #13 inMap #10 resolution 15 metric correlation
    3925 
    3926 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3927 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3928 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    3929 steps = 48, shift = 0.0596, angle = 0.0428 degrees 
    3930  
    3931 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3932 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3933 Matrix rotation and translation 
    3934 0.99668649 0.07827405 -0.02211936 227.56347262 
    3935 0.07475639 -0.77433093 0.62834950 154.58058276 
    3936 0.03205573 -0.62792102 -0.77761663 174.22788026 
    3937 Axis -0.99906756 -0.04308354 -0.00279747 
    3938 Axis point 0.00000000 103.10714168 61.22171308 
    3939 Rotation angle (degrees) 141.04413900 
    3940 Shift along axis -234.49855870 
    3941  
    3942 Average map value = 0.5294 for 10778 atoms, 7656 outside contour 
    3943 
    3944 > fitmap #13 inMap #10 resolution 15 metric correlation
    3945 
    3946 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3947 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3948 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    3949 steps = 48, shift = 0.0626, angle = 0.0444 degrees 
    3950  
    3951 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3952 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3953 Matrix rotation and translation 
    3954 0.99667299 0.07861263 -0.02151904 227.51215711 
    3955 0.07465434 -0.77456249 0.62807617 154.57061955 
    3956 0.03270685 -0.62759304 -0.77785425 174.28777675 
    3957 Axis -0.99906388 -0.04314443 -0.00314939 
    3958 Axis point 0.00000000 103.07365400 61.23161383 
    3959 Rotation angle (degrees) 141.06613819 
    3960 Shift along axis -234.51693885 
    3961  
    3962 Average map value = 0.5293 for 10778 atoms, 7658 outside contour 
    3963 
    3964 > fitmap #13 inMap #10 resolution 15 metric correlation
    3965 
    3966 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3967 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3968 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    3969 steps = 44, shift = 0.0709, angle = 0.037 degrees 
    3970  
    3971 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3972 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3973 Matrix rotation and translation 
    3974 0.99669033 0.07826592 -0.02197497 227.56816488 
    3975 0.07466125 -0.77437474 0.62830682 154.57535061 
    3976 0.03215812 -0.62786800 -0.77765521 174.22750671 
    3977 Axis -0.99906866 -0.04305346 -0.00286688 
    3978 Axis point 0.00000000 103.10181489 61.21595500 
    3979 Rotation angle (degrees) 141.04771872 
    3980 Shift along axis -234.51071495 
    3981  
    3982 Average map value = 0.5294 for 10778 atoms, 7657 outside contour 
    3983 
    3984 > fitmap #13 inMap #10 resolution 15 metric correlation
    3985 
    3986 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    3987 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    3988 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    3989 steps = 48, shift = 0.0727, angle = 0.0318 degrees 
    3990  
    3991 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    3992 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    3993 Matrix rotation and translation 
    3994 0.99667061 0.07860635 -0.02165157 227.51167420 
    3995 0.07473261 -0.77455577 0.62807515 154.57566470 
    3996 0.03260032 -0.62760212 -0.77785140 174.28502188 
    3997 Axis -0.99906321 -0.04316481 -0.00308209 
    3998 Axis point 0.00000000 103.07647230 61.23753323 
    3999 Rotation angle (degrees) 141.06581020 
    4000 Shift along axis -234.50793587 
    4001  
    4002 Average map value = 0.5293 for 10778 atoms, 7659 outside contour 
    4003 
    4004 > fitmap #13 inMap #10 resolution 15 metric correlation
    4005 
    4006 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4007 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4008 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    4009 steps = 64, shift = 0.0146, angle = 0.00564 degrees 
    4010  
    4011 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4012 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4013 Matrix rotation and translation 
    4014 0.99667823 0.07850876 -0.02165495 227.52039489 
    4015 0.07465911 -0.77456720 0.62806980 154.57241502 
    4016 0.03253574 -0.62760023 -0.77785563 174.27515256 
    4017 Axis -0.99906536 -0.04311646 -0.00306295 
    4018 Axis point 0.00000000 103.07884625 61.23363625 
    4019 Rotation angle (degrees) 141.06617661 
    4020 Shift along axis -234.50615564 
    4021  
    4022 Average map value = 0.5293 for 10778 atoms, 7662 outside contour 
    4023 
    4024 > fitmap #13 inMap #10 resolution 15 metric correlation
    4025 
    4026 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4027 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4028 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    4029 steps = 48, shift = 0.0183, angle = 0.0123 degrees 
    4030  
    4031 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4032 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4033 Matrix rotation and translation 
    4034 0.99667471 0.07859314 -0.02151027 227.50520714 
    4035 0.07463831 -0.77465297 0.62796648 154.56975178 
    4036 0.03269084 -0.62748380 -0.77794305 174.29271683 
    4037 Axis -0.99906441 -0.04313225 -0.00314718 
    4038 Axis point 0.00000000 103.06881050 61.23968326 
    4039 Rotation angle (degrees) 141.07423298 
    4040 Shift along axis -234.50782944 
    4041  
    4042 Average map value = 0.5293 for 10778 atoms, 7661 outside contour 
    4043 
    4044 > fitmap #13 inMap #10 resolution 15 metric correlation
    4045 
    4046 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4047 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4048 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    4049 steps = 76, shift = 0.0191, angle = 0.0153 degrees 
    4050  
    4051 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4052 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4053 Matrix rotation and translation 
    4054 0.99667757 0.07850030 -0.02171620 227.52183331 
    4055 0.07469069 -0.77455941 0.62807564 154.57462058 
    4056 0.03248361 -0.62761089 -0.77784920 174.27384784 
    4057 Axis -0.99906517 -0.04312314 -0.00303105 
    4058 Axis point 0.00000000 103.08078320 61.23603497 
    4059 Rotation angle (degrees) 141.06555897 
    4060 Shift along axis -234.50311300 
    4061  
    4062 Average map value = 0.5293 for 10778 atoms, 7661 outside contour 
    4063 
    4064 > fitmap #13 inMap #10 resolution 15 metric correlation
    4065 
    4066 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4067 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4068 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    4069 steps = 48, shift = 0.0582, angle = 0.033 degrees 
    4070  
    4071 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4072 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4073 Matrix rotation and translation 
    4074 0.99668797 0.07826789 -0.02207480 227.57079867 
    4075 0.07472262 -0.77431405 0.62837432 154.57801824 
    4076 0.03208868 -0.62794260 -0.77759784 174.22398838 
    4077 Axis -0.99906796 -0.04307272 -0.00281932 
    4078 Axis point 0.00000000 103.10676508 61.21615460 
    4079 Rotation angle (degrees) 141.04244679 
    4080 Shift along axis -234.50798402 
    4081  
    4082 Average map value = 0.5294 for 10778 atoms, 7659 outside contour 
    4083 
    4084 > fitmap #13 inMap #10 resolution 15 metric correlation
    4085 
    4086 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4087 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4088 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    4089 steps = 40, shift = 0.0226, angle = 0.0184 degrees 
    4090  
    4091 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4092 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4093 Matrix rotation and translation 
    4094 0.99668599 0.07836234 -0.02182741 227.55055365 
    4095 0.07464659 -0.77443442 0.62823500 154.57286020 
    4096 0.03232604 -0.62778235 -0.77771739 174.24655441 
    4097 Axis -0.99906747 -0.04307500 -0.00295560 
    4098 Axis point 0.00000000 103.09331129 61.22079392 
    4099 Rotation angle (degrees) 141.05346982 
    4100 Shift along axis -234.51158523 
    4101  
    4102 Average map value = 0.5294 for 10778 atoms, 7662 outside contour 
    4103 
    4104 > fitmap #13 inMap #10 resolution 15 metric correlation
    4105 
    4106 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4107 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4108 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    4109 steps = 60, shift = 0.0341, angle = 0.0255 degrees 
    4110  
    4111 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4112 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4113 Matrix rotation and translation 
    4114 0.99667829 0.07853585 -0.02155385 227.52232882 
    4115 0.07461978 -0.77462929 0.62799789 154.56873140 
    4116 0.03262408 -0.62752019 -0.77791650 174.28055273 
    4117 Axis -0.99906541 -0.04311152 -0.00311617 
    4118 Axis point 0.00000000 103.07148804 61.23477652 
    4119 Rotation angle (degrees) 141.07177968 
    4120 Shift along axis -234.51646871 
    4121  
    4122 Average map value = 0.5293 for 10778 atoms, 7663 outside contour 
    4123 
    4124 > fitmap #13 inMap #10 resolution 15 metric correlation
    4125 
    4126 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    4127 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    4128 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    4129 steps = 48, shift = 0.0586, angle = 0.0456 degrees 
    4130  
    4131 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    4132 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4133 Matrix rotation and translation 
    4134 0.99668786 0.07825231 -0.02213475 227.57300258 
    4135 0.07474888 -0.77432629 0.62835611 154.57957322 
    4136 0.03203077 -0.62792944 -0.77761086 174.22292363 
    4137 Axis -0.99906794 -0.04307543 -0.00278612 
    4138 Axis point 0.00000000 103.10739338 61.22003354 
    4139 Rotation angle (degrees) 141.04360255 
    4140 Shift along axis -234.50487804 
    4141  
    4142 Average map value = 0.5294 for 10778 atoms, 7659 outside contour 
    4143 
    4144 > select add #13
    4145 
    4146 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    4147 
    4148 > select subtract #13
    4149 
    4150 Nothing selected 
    4151 
    4152 > open /Users/francescappadoo/Downloads/rnacomposer-2024-07-03-153612/264.pdb
    4153 
    4154 Chain information for 264.pdb #17 
    4155 --- 
    4156 Chain | Description 
    4157 A | No description available 
    4158  
    4159 
    4160 > hide #13 models
    4161 
    4162 > tile
    4163 
    4164 3 models tiled 
    4165 
    4166 > ui mousemode right "rotate selected models"
    4167 
    4168 > select add #17
    4169 
    4170 8451 atoms, 9112 bonds, 264 residues, 1 model selected 
    4171 
    4172 > view matrix models
    4173 > #17,-0.5088,0.69981,0.50139,477.86,-0.29255,-0.68831,0.66381,150.72,0.80965,0.19107,0.55494,63.121
    4174 
    4175 > view matrix models
    4176 > #17,-0.57726,-0.76614,0.28248,412.04,0.81336,-0.50892,0.28186,176.22,-0.072184,0.39246,0.91693,58.309
    4177 
    4178 > select #13:63-68
    4179 
    4180 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4181 
    4182 > color #9-10,17 magenta
    4183 
    4184 > select #13:63-68
    4185 
    4186 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4187 
    4188 > select add #17
    4189 
    4190 8640 atoms, 9315 bonds, 270 residues, 2 models selected 
    4191 
    4192 > select #13:63-68
    4193 
    4194 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4195 
    4196 > color #17 silver
    4197 
    4198 > select #13:63-68
    4199 
    4200 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4201 
    4202 > color #9-10,17 red
    4203 
    4204 > select add #17
    4205 
    4206 8640 atoms, 9315 bonds, 270 residues, 2 models selected 
    4207 
    4208 > select #13:63-68
    4209 
    4210 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4211 
    4212 > select #17:63-68
    4213 
    4214 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4215 
    4216 > color sel bynucleotide
    4217 
    4218 > select add #17
    4219 
    4220 8451 atoms, 9112 bonds, 264 residues, 1 model selected 
    4221 
    4222 > color sel bynucleotide
    4223 
    4224 > color #17 #0433ffff
    4225 
    4226 > close #17
    4227 
    4228 > open /Users/francescappadoo/Downloads/rnacomposer-2024-07-03-153612/264.pdb
    4229 
    4230 Chain information for 264.pdb #17 
    4231 --- 
    4232 Chain | Description 
    4233 A | No description available 
    4234  
    4235 
    4236 > tile
    4237 
    4238 3 models tiled 
    4239 
    4240 > select add #17
    4241 
    4242 8451 atoms, 9112 bonds, 264 residues, 1 model selected 
    4243 
    4244 > view matrix models
    4245 > #17,0.78543,0.6179,0.036096,506.3,-0.55959,0.73381,-0.3852,245.48,-0.2645,0.28235,0.92213,60.301
    4246 
    4247 > select up
    4248 
    4249 40785 atoms, 43984 bonds, 1272 residues, 28 models selected 
    4250 
    4251 > select #17:63-68
    4252 
    4253 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4254 
    4255 > preset "initial styles" cartoon
    4256 
    4257 Using preset: Initial Styles / Cartoon 
    4258 Preset implemented in Python; no expansion to individual ChimeraX commands
    4259 available. 
    4260 
    4261 > color sel magenta
    4262 
    4263 > color sel yellow
    4264 
    4265 > color sel red
    4266 
    4267 > color sel forest green
    4268 
    4269 > fitmap #17 inMap #10 search 200
    4270 
    4271 Found 114 unique fits from 200 random placements having fraction of points
    4272 inside contour >= 0.100 (199 of 200). 
    4273  
    4274 Average map values and times found: 
    4275 0.7284 (1), 0.724 (4), 0.701 (8), 0.6886 (4), 0.6841 (7), 0.6763 (4), 0.6755
    4276 (4), 0.6728 (4), 0.6716 (2), 0.6624 (4), 0.6531 (2), 0.6498 (4), 0.6476 (2),
    4277 0.6442 (1), 0.641 (1), 0.64 (1), 0.636 (3), 0.6332 (1), 0.6295 (1), 0.6258
    4278 (1), 0.6141 (2), 0.6101 (1), 0.6081 (1), 0.6038 (1), 0.5948 (3), 0.5939 (1),
    4279 0.5921 (1), 0.5921 (2), 0.591 (1), 0.5906 (1), 0.5865 (1), 0.586 (1), 0.5852
    4280 (1), 0.5845 (2), 0.5816 (2), 0.5803 (3), 0.5802 (2), 0.5792 (3), 0.5783 (7),
    4281 0.5764 (3), 0.576 (3), 0.5723 (1), 0.5717 (1), 0.5706 (1), 0.5702 (1), 0.5672
    4282 (2), 0.5629 (4), 0.5623 (3), 0.5591 (1), 0.5591 (1), 0.5591 (1), 0.5568 (3),
    4283 0.5549 (3), 0.5522 (1), 0.5477 (1), 0.5444 (2), 0.538 (1), 0.5372 (1), 0.5371
    4284 (2), 0.537 (1), 0.5314 (1), 0.5259 (2), 0.5257 (1), 0.524 (2), 0.5205 (1),
    4285 0.5171 (1), 0.513 (1), 0.5103 (1), 0.5074 (1), 0.5014 (1), 0.4976 (3), 0.4973
    4286 (2), 0.4951 (1), 0.4945 (2), 0.4945 (1), 0.4932 (1), 0.492 (1), 0.4918 (1),
    4287 0.4913 (1), 0.4823 (1), 0.4795 (1), 0.4743 (1), 0.4741 (1), 0.4656 (1), 0.4649
    4288 (2), 0.4627 (2), 0.4547 (1), 0.452 (1), 0.4518 (2), 0.4498 (1), 0.4486 (1),
    4289 0.4422 (1), 0.4406 (1), 0.4392 (2), 0.4388 (1), 0.4376 (2), 0.431 (1), 0.4249
    4290 (1), 0.4231 (1), 0.4151 (1), 0.4079 (1), 0.407 (1), 0.404 (1), 0.4013 (2),
    4291 0.3963 (1), 0.3749 (1), 0.373 (2), 0.3671 (1), 0.3459 (1), 0.2486 (1), 0.2467
    4292 (1), 0.2416 (1), 0.2386 (1), 0.1902 (1) 
    4293  
    4294 Best fit found: 
    4295 Fit molecule 264.pdb (#17) to map cryosparc_P12_J2768_004_volume_map.mrc (#10)
    4296 using 8451 atoms 
    4297 average map value = 0.7284, steps = 112 
    4298 shifted from previous position = 28.3 
    4299 rotated from previous position = 38.7 degrees 
    4300 atoms outside contour = 5160, contour level = 0.41421 
    4301 Position of 264.pdb (#17) relative to cryosparc_P12_J2768_004_volume_map.mrc
    4302 (#10) coordinates: 
    4303 Matrix rotation and translation 
    4304 -0.84932311 -0.40353876 0.34030386 142.09082368 
    4305 0.52577829 -0.58931899 0.61340058 155.97167995 
    4306 -0.04698337 0.69989969 0.71269416 209.51610798 
    4307 Axis 0.08560059 0.38326421 0.91966357 
    4308 Axis point 53.25141698 51.93956621 0.00000000 
    4309 Rotation angle (degrees) 149.65215846 
    4310 Shift along axis 264.62575304 
    4311  
    4312 Found 114 fits. 
    4313 Opened 264.pdb map 15 as #18, grid size 37,44,42, pixel 5, shown at level
    4314 0.035, step 1, values float32 
    4315 
    4316 > fitmap #17 inMap #10 resolution 15 metric correlation
    4317 
    4318 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4319 1990 points 
    4320 correlation = 0.5526, correlation about mean = 0.2873, overlap = 225.9 
    4321 steps = 100, shift = 31.2, angle = 0.987 degrees 
    4322  
    4323 Position of 264.pdb map 15 (#18) relative to
    4324 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4325 Matrix rotation and translation 
    4326 -0.85251231 -0.39744622 0.33949853 142.92729830 
    4327 0.52150085 -0.60262118 0.60405672 155.30094800 
    4328 -0.03549105 0.69201459 0.72101052 208.89061499 
    4329 Axis 0.08827546 0.37634356 0.92226513 
    4330 Axis point 53.35770357 52.33876330 0.00000000 
    4331 Rotation angle (degrees) 150.11894061 
    4332 Shift along axis 263.71601503 
    4333  
    4334 Average map value = 0.7271 for 8451 atoms, 5141 outside contour 
    4335 
    4336 > fitmap #17 inMap #10 resolution 15 metric correlation
    4337 
    4338 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4339 1990 points 
    4340 correlation = 0.5404, correlation about mean = 0.225, overlap = 219.9 
    4341 steps = 64, shift = 2.18, angle = 1.1 degrees 
    4342  
    4343 Position of 264.pdb map 15 (#18) relative to
    4344 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4345 Matrix rotation and translation 
    4346 0.83768620 0.37564100 -0.39645386 235.80854243 
    4347 -0.54357430 0.64387922 -0.53846679 217.33063804 
    4348 0.05299819 0.66656833 0.74355756 208.13130369 
    4349 Axis 0.76227238 -0.28431112 -0.58147055 
    4350 Axis point 0.00000000 -123.49526667 483.66858573 
    4351 Rotation angle (degrees) 52.22505251 
    4352 Shift along axis -3.06140370 
    4353  
    4354 Average map value = 0.696 for 8451 atoms, 5027 outside contour 
    4355 
    4356 > select down
    4357 
    4358 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4359 
    4360 > fitmap #17 inMap #10 resolution 15 metric correlation
    4361 
    4362 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4363 1990 points 
    4364 correlation = 0.5258, correlation about mean = 0.2171, overlap = 209.1 
    4365 steps = 116, shift = 3.16, angle = 15.7 degrees 
    4366  
    4367 Position of 264.pdb map 15 (#18) relative to
    4368 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4369 Matrix rotation and translation 
    4370 0.97075184 0.11906928 -0.20847875 226.01313250 
    4371 0.23869264 -0.57203758 0.78472850 164.83800437 
    4372 -0.02582063 -0.81153897 -0.58372750 160.06098267 
    4373 Axis -0.99077438 -0.11337259 0.07424806 
    4374 Axis point 0.00000000 114.72132918 53.09723398 
    4375 Rotation angle (degrees) 126.33508833 
    4376 Shift along axis -230.73191740 
    4377  
    4378 Average map value = 0.6569 for 8451 atoms, 5269 outside contour 
    4379 
    4380 > fitmap #17 inMap #10 resolution 15 metric correlation
    4381 
    4382 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4383 1990 points 
    4384 correlation = 0.5258, correlation about mean = 0.2171, overlap = 209.1 
    4385 steps = 88, shift = 8.75, angle = 0.019 degrees 
    4386  
    4387 Position of 264.pdb map 15 (#18) relative to
    4388 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4389 Matrix rotation and translation 
    4390 0.97076922 0.11931043 -0.20825983 225.97965134 
    4391 0.23865421 -0.57209111 0.78470117 164.83943252 
    4392 -0.02552057 -0.81146582 -0.58384238 160.07111617 
    4393 Axis -0.99078033 -0.11343078 0.07407964 
    4394 Axis point 0.00000000 114.70461245 53.08930251 
    4395 Rotation angle (degrees) 126.34045905 
    4396 Shift along axis -230.73604789 
    4397  
    4398 Average map value = 0.6568 for 8451 atoms, 5268 outside contour 
    4399 
    4400 > fitmap #17 inMap #10 resolution 15 metric correlation
    4401 
    4402 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4403 1990 points 
    4404 correlation = 0.5262, correlation about mean = 0.2273, overlap = 213.9 
    4405 steps = 52, shift = 0.201, angle = 0.875 degrees 
    4406  
    4407 Position of 264.pdb map 15 (#18) relative to
    4408 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4409 Matrix rotation and translation 
    4410 -0.87256220 -0.24856775 0.42053455 152.68097691 
    4411 0.45110523 -0.07965866 0.88890864 188.03765767 
    4412 -0.18745480 0.96533341 0.18163734 236.87775876 
    4413 Axis 0.08217080 0.65370133 0.75227823 
    4414 Axis point 66.19141531 11.90574424 0.00000000 
    4415 Rotation angle (degrees) 152.28744578 
    4416 Shift along axis 313.66436529 
    4417  
    4418 Average map value = 0.6834 for 8451 atoms, 5203 outside contour 
    4419 
    4420 > fitmap #17 inMap #10 resolution 15 metric correlation
    4421 
    4422 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4423 1990 points 
    4424 correlation = 0.4989, correlation about mean = 0.2259, overlap = 194.7 
    4425 steps = 44, shift = 1.36, angle = 1.39 degrees 
    4426  
    4427 Position of 264.pdb map 15 (#18) relative to
    4428 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4429 Matrix rotation and translation 
    4430 0.49507334 0.15402458 0.85508995 191.69814788 
    4431 -0.86296959 -0.02714987 0.50452587 170.36113632 
    4432 0.10092497 -0.98769394 0.11947734 157.79273626 
    4433 Axis -0.76251240 0.38537228 -0.51967590 
    4434 Axis point 0.00000000 172.62860772 -110.35452018 
    4435 Rotation angle (degrees) 101.90558652 
    4436 Shift along axis -162.52083728 
    4437  
    4438 Average map value = 0.6339 for 8451 atoms, 5516 outside contour 
    4439 
    4440 > fitmap #17 inMap #10 resolution 15 metric correlation
    4441 
    4442 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4443 1990 points 
    4444 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4445 steps = 96, shift = 3.73, angle = 7.44 degrees 
    4446  
    4447 Position of 264.pdb map 15 (#18) relative to
    4448 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4449 Matrix rotation and translation 
    4450 0.70105126 -0.41923497 0.57686150 181.62769254 
    4451 -0.69093398 -0.19915827 0.69494331 160.84137599 
    4452 -0.17645780 -0.88576408 -0.42928386 147.24123359 
    4453 Axis -0.89205243 0.42512632 -0.15332994 
    4454 Axis point 0.00000000 167.61014411 -13.32262965 
    4455 Rotation angle (degrees) 117.62582547 
    4456 Shift along axis -116.22001202 
    4457  
    4458 Average map value = 0.6017 for 8451 atoms, 5604 outside contour 
    4459 
    4460 > fitmap #17 inMap #10 resolution 15 metric correlation
    4461 
    4462 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4463 1990 points 
    4464 correlation = 0.5027, correlation about mean = 0.2111, overlap = 190.2 
    4465 steps = 28, shift = 0.0706, angle = 0.0886 degrees 
    4466  
    4467 Position of 264.pdb map 15 (#18) relative to
    4468 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4469 Matrix rotation and translation 
    4470 0.70200826 -0.41841342 0.57629387 181.74632507 
    4471 -0.69020002 -0.20028101 0.69534987 160.76067513 
    4472 -0.17552301 -0.88589938 -0.42938788 147.24054421 
    4473 Axis -0.89242934 0.42431226 -0.15339159 
    4474 Axis point 0.00000000 167.45000360 -13.28116545 
    4475 Rotation angle (degrees) 117.63454818 
    4476 Shift along axis -116.56848918 
    4477  
    4478 Average map value = 0.6022 for 8451 atoms, 5607 outside contour 
    4479 
    4480 > fitmap #17 inMap #10 resolution 15 metric correlation
    4481 
    4482 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4483 1990 points 
    4484 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4485 steps = 48, shift = 0.0784, angle = 0.181 degrees 
    4486  
    4487 Position of 264.pdb map 15 (#18) relative to
    4488 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4489 Matrix rotation and translation 
    4490 0.69982433 -0.41976610 0.57796397 181.55473675 
    4491 -0.69212033 -0.19834580 0.69399451 160.86371657 
    4492 -0.17667865 -0.88569484 -0.42933588 147.24343649 
    4493 Axis -0.89160079 0.42593182 -0.15372089 
    4494 Axis point 0.00000000 167.71428007 -13.38425378 
    4495 Rotation angle (degrees) 117.64090965 
    4496 Shift along axis -115.99176416 
    4497  
    4498 Average map value = 0.6015 for 8451 atoms, 5605 outside contour 
    4499 
    4500 > fitmap #17 inMap #10 resolution 15 metric correlation
    4501 
    4502 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4503 1990 points 
    4504 correlation = 0.5027, correlation about mean = 0.2111, overlap = 190.2 
    4505 steps = 28, shift = 0.0801, angle = 0.147 degrees 
    4506  
    4507 Position of 264.pdb map 15 (#18) relative to
    4508 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4509 Matrix rotation and translation 
    4510 0.70158083 -0.41859379 0.57668327 181.72544653 
    4511 -0.69060808 -0.19995671 0.69503797 160.77013614 
    4512 -0.17562689 -0.88588743 -0.42937007 147.23595546 
    4513 Axis -0.89226906 0.42460136 -0.15352397 
    4514 Axis point 0.00000000 167.48981487 -13.31007516 
    4515 Rotation angle (degrees) 117.63730716 
    4516 Shift along axis -116.48902169 
    4517  
    4518 Average map value = 0.6021 for 8451 atoms, 5607 outside contour 
    4519 
    4520 > fitmap #17 inMap #10 resolution 15 metric correlation
    4521 
    4522 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4523 1990 points 
    4524 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4525 steps = 44, shift = 0.0726, angle = 0.147 degrees 
    4526  
    4527 Position of 264.pdb map 15 (#18) relative to
    4528 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4529 Matrix rotation and translation 
    4530 0.69985311 -0.41972860 0.57795634 181.56480463 
    4531 -0.69207672 -0.19825543 0.69406382 160.86839465 
    4532 -0.17673546 -0.88573284 -0.42923409 147.23261675 
    4533 Axis -0.89160314 0.42593177 -0.15370740 
    4534 Axis point 0.00000000 167.72163329 -13.40110429 
    4535 Rotation angle (degrees) 117.63376475 
    4536 Shift along axis -115.99553342 
    4537  
    4538 Average map value = 0.6015 for 8451 atoms, 5607 outside contour 
    4539 
    4540 > fitmap #17 inMap #10 resolution 15 metric correlation
    4541 
    4542 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4543 1990 points 
    4544 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4545 steps = 40, shift = 0.0128, angle = 0.0551 degrees 
    4546  
    4547 Position of 264.pdb map 15 (#18) relative to
    4548 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4549 Matrix rotation and translation 
    4550 0.70051192 -0.41937374 0.57741556 181.61117241 
    4551 -0.69149313 -0.19887324 0.69446862 160.83999571 
    4552 -0.17640941 -0.88576243 -0.42930715 147.23876688 
    4553 Axis -0.89185675 0.42544657 -0.15357977 
    4554 Axis point 0.00000000 167.64217580 -13.35714762 
    4555 Rotation angle (degrees) 117.63480173 
    4556 Shift along axis -116.15522099 
    4557  
    4558 Average map value = 0.6017 for 8451 atoms, 5606 outside contour 
    4559 
    4560 > fitmap #17 inMap #10 resolution 15 metric correlation
    4561 
    4562 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4563 1990 points 
    4564 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4565 steps = 40, shift = 0.00799, angle = 0.0261 degrees 
    4566  
    4567 Position of 264.pdb map 15 (#18) relative to
    4568 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4569 Matrix rotation and translation 
    4570 0.70083448 -0.41921688 0.57713798 181.63438395 
    4571 -0.69118836 -0.19910301 0.69470615 160.82793868 
    4572 -0.17632264 -0.88578506 -0.42929610 147.23782102 
    4573 Axis -0.89197622 0.42522790 -0.15349158 
    4574 Axis point 0.00000000 167.61017213 -13.34103767 
    4575 Rotation angle (degrees) 117.63144408 
    4576 Shift along axis -116.22478960 
    4577  
    4578 Average map value = 0.6017 for 8451 atoms, 5607 outside contour 
    4579 
    4580 > fitmap #17 inMap #10 resolution 15 metric correlation
    4581 
    4582 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4583 1990 points 
    4584 correlation = 0.5026, correlation about mean = 0.2114, overlap = 190.1 
    4585 steps = 44, shift = 0.038, angle = 0.0506 degrees 
    4586  
    4587 Position of 264.pdb map 15 (#18) relative to
    4588 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4589 Matrix rotation and translation 
    4590 0.70022485 -0.41974352 0.57749506 181.55769624 
    4591 -0.69172025 -0.19872545 0.69428473 160.84760481 
    4592 -0.17665856 -0.88562043 -0.42949760 147.24743371 
    4593 Axis -0.89175973 0.42567354 -0.15351421 
    4594 Axis point 0.00000000 167.66802357 -13.33116420 
    4595 Rotation angle (degrees) 117.64546462 
    4596 Shift along axis -116.04184591 
    4597  
    4598 Average map value = 0.6015 for 8451 atoms, 5605 outside contour 
    4599 
    4600 > fitmap #17 inMap #10 resolution 15 metric correlation
    4601 
    4602 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4603 1990 points 
    4604 correlation = 0.5027, correlation about mean = 0.2112, overlap = 190.1 
    4605 steps = 44, shift = 0.0766, angle = 0.0339 degrees 
    4606  
    4607 Position of 264.pdb map 15 (#18) relative to
    4608 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4609 Matrix rotation and translation 
    4610 0.70038816 -0.41924867 0.57765647 181.64800520 
    4611 -0.69169130 -0.19897091 0.69424326 160.80761874 
    4612 -0.17612374 -0.88579970 -0.42934755 147.22833413 
    4613 Axis -0.89181961 0.42545424 -0.15377409 
    4614 Axis point 0.00000000 167.61723987 -13.37584184 
    4615 Rotation angle (degrees) 117.64326913 
    4616 Shift along axis -116.22087451 
    4617  
    4618 Average map value = 0.6019 for 8451 atoms, 5605 outside contour 
    4619 
    4620 > fitmap #17 inMap #10 resolution 15 metric correlation
    4621 
    4622 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4623 1990 points 
    4624 correlation = 0.5026, correlation about mean = 0.2113, overlap = 190.1 
    4625 steps = 60, shift = 0.0625, angle = 0.0356 degrees 
    4626  
    4627 Position of 264.pdb map 15 (#18) relative to
    4628 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4629 Matrix rotation and translation 
    4630 0.70004733 -0.41965689 0.57777318 181.57120652 
    4631 -0.69191683 -0.19853725 0.69414267 160.85462088 
    4632 -0.17659226 -0.88570369 -0.42935315 147.24306791 
    4633 Axis -0.89168565 0.42577358 -0.15366702 
    4634 Axis point 0.00000000 167.68896117 -13.37085754 
    4635 Rotation angle (degrees) 117.64044819 
    4636 Shift along axis -116.04319556 
    4637  
    4638 Average map value = 0.6015 for 8451 atoms, 5605 outside contour 
    4639 
    4640 > fitmap #17 inMap #10 resolution 15 metric correlation
    4641 
    4642 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4643 1990 points 
    4644 correlation = 0.4908, correlation about mean = 0.2138, overlap = 184.3 
    4645 steps = 120, shift = 1.63, angle = 3.1 degrees 
    4646  
    4647 Position of 264.pdb map 15 (#18) relative to
    4648 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4649 Matrix rotation and translation 
    4650 -0.18393919 0.65288024 -0.73478829 229.56797066 
    4651 0.98146285 0.16292618 -0.10092458 229.11296705 
    4652 0.05382458 -0.73973139 -0.67074617 143.36810207 
    4653 Axis -0.59883582 -0.73926831 0.30802276 
    4654 Axis point -21.84317279 0.00000000 133.53706673 
    4655 Rotation angle (degrees) 147.76629877 
    4656 Shift along axis -262.68884227 
    4657  
    4658 Average map value = 0.5909 for 8451 atoms, 5684 outside contour 
    4659 
    4660 > fitmap #17 inMap #10 resolution 15 metric correlation
    4661 
    4662 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4663 1990 points 
    4664 correlation = 0.4687, correlation about mean = 0.2283, overlap = 161.9 
    4665 steps = 208, shift = 12.5, angle = 20.5 degrees 
    4666  
    4667 Position of 264.pdb map 15 (#18) relative to
    4668 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4669 Matrix rotation and translation 
    4670 -0.16849971 0.55486148 -0.81470037 228.78472834 
    4671 0.50448692 -0.66151840 -0.55487513 166.34375882 
    4672 -0.84681809 -0.50450194 -0.16845467 129.20809173 
    4673 Axis 0.64461382 0.41100286 -0.64463143 
    4674 Axis point 180.69036200 122.18916356 0.00000000 
    4675 Rotation angle (degrees) 177.76074764 
    4676 Shift along axis 132.55396031 
    4677  
    4678 Average map value = 0.5226 for 8451 atoms, 5898 outside contour 
    4679 
    4680 > fitmap #17 inMap #10 resolution 15 metric correlation
    4681 
    4682 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4683 1990 points 
    4684 correlation = 0.3625, correlation about mean = 0.1073, overlap = 111.7 
    4685 steps = 292, shift = 7.26, angle = 20.5 degrees 
    4686  
    4687 Position of 264.pdb map 15 (#18) relative to
    4688 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4689 Matrix rotation and translation 
    4690 0.63836671 -0.57015423 -0.51711905 177.70033383 
    4691 0.51518094 -0.18267777 0.83738724 204.27325201 
    4692 -0.57190604 -0.80097000 0.17711718 169.05604147 
    4693 Axis -0.83334415 0.02786720 0.55205159 
    4694 Axis point 0.00000000 202.84682776 40.91520516 
    4695 Rotation angle (degrees) 100.57934210 
    4696 Shift along axis -49.06535447 
    4697  
    4698 Average map value = 0.3627 for 8451 atoms, 6784 outside contour 
    4699 
    4700 > select down
    4701 
    4702 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4703 
    4704 > select down
    4705 
    4706 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4707 
    4708 > fitmap #17 inMap #10 resolution 15 metric correlation
    4709 
    4710 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4711 1990 points 
    4712 correlation = 0.5526, correlation about mean = 0.2875, overlap = 225.8 
    4713 steps = 48, shift = 0.705, angle = 0.937 degrees 
    4714  
    4715 Position of 264.pdb map 15 (#18) relative to
    4716 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4717 Matrix rotation and translation 
    4718 -0.85212065 -0.39819736 0.33960166 142.84172719 
    4719 0.52209271 -0.60192919 0.60423538 155.35496006 
    4720 -0.03618877 0.69218500 0.72081221 208.87537921 
    4721 Axis 0.08813103 0.37656556 0.92218832 
    4722 Axis point 53.31650973 52.36564383 0.00000000 
    4723 Rotation angle (degrees) 150.06806902 
    4724 Shift along axis 263.71255202 
    4725  
    4726 Average map value = 0.7273 for 8451 atoms, 5145 outside contour 
    4727 
    4728 > fitmap #17 inMap #10 resolution 15 metric correlation
    4729 
    4730 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4731 1990 points 
    4732 correlation = 0.5526, correlation about mean = 0.2873, overlap = 225.9 
    4733 steps = 44, shift = 0.0729, angle = 0.0726 degrees 
    4734  
    4735 Position of 264.pdb map 15 (#18) relative to
    4736 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4737 Matrix rotation and translation 
    4738 -0.85259099 -0.39734266 0.33942221 142.94340094 
    4739 0.52138049 -0.60281979 0.60396244 155.29555715 
    4740 -0.03536961 0.69190106 0.72112542 208.88767250 
    4741 Axis 0.08828118 0.37625181 0.92230201 
    4742 Axis point 53.36541299 52.34463431 0.00000000 
    4743 Rotation angle (degrees) 150.12827884 
    4744 Shift along axis 263.70696862 
    4745  
    4746 Average map value = 0.7271 for 8451 atoms, 5140 outside contour 
    4747 
    4748 > fitmap #17 inMap #10 resolution 15 metric correlation
    4749 
    4750 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4751 1990 points 
    4752 correlation = 0.5258, correlation about mean = 0.2171, overlap = 209.1 
    4753 steps = 116, shift = 3.16, angle = 15.7 degrees 
    4754  
    4755 Position of 264.pdb map 15 (#18) relative to
    4756 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4757 Matrix rotation and translation 
    4758 0.97075678 0.11905909 -0.20846154 226.01371536 
    4759 0.23867270 -0.57204040 0.78473248 164.83682002 
    4760 -0.02581891 -0.81153843 -0.58372824 160.06109820 
    4761 Axis -0.99077595 -0.11336292 0.07424196 
    4762 Axis point 0.00000000 114.72147677 53.09636204 
    4763 Rotation angle (degrees) 126.33504074 
    4764 Shift along axis -230.73208564 
    4765  
    4766 Average map value = 0.657 for 8451 atoms, 5269 outside contour 
    4767 
    4768 > fitmap #17 inMap #10 resolution 15 metric correlation
    4769 
    4770 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4771 1990 points 
    4772 correlation = 0.5259, correlation about mean = 0.2171, overlap = 209.1 
    4773 steps = 40, shift = 0.00357, angle = 0.00832 degrees 
    4774  
    4775 Position of 264.pdb map 15 (#18) relative to
    4776 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4777 Matrix rotation and translation 
    4778 0.97078565 0.11893378 -0.20839863 226.01092961 
    4779 0.23854786 -0.57207575 0.78474467 164.83153053 
    4780 -0.02588717 -0.81153189 -0.58373432 160.06174292 
    4781 Axis -0.99078513 -0.11328215 0.07424268 
    4782 Axis point 0.00000000 114.72739316 53.09341976 
    4783 Rotation angle (degrees) 126.33548708 
    4784 Shift along axis -230.71732715 
    4785  
    4786 Average map value = 0.657 for 8451 atoms, 5268 outside contour 
    4787 
    4788 > fitmap #17 inMap #10 resolution 15 metric correlation
    4789 
    4790 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4791 1990 points 
    4792 correlation = 0.5259, correlation about mean = 0.2171, overlap = 209.1 
    4793 steps = 40, shift = 0.00701, angle = 0.00569 degrees 
    4794  
    4795 Position of 264.pdb map 15 (#18) relative to
    4796 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4797 Matrix rotation and translation 
    4798 0.97076535 0.11901969 -0.20844412 226.00825475 
    4799 0.23863482 -0.57206850 0.78472351 164.83592990 
    4800 -0.02584679 -0.81152440 -0.58374651 160.06225155 
    4801 Axis -0.99077877 -0.11333676 0.07424419 
    4802 Axis point 0.00000000 114.72316081 53.09650349 
    4803 Rotation angle (degrees) 126.33638502 
    4804 Shift along axis -230.72246031 
    4805  
    4806 Average map value = 0.6569 for 8451 atoms, 5267 outside contour 
    4807 
    4808 > fitmap #17 inMap #10 resolution 15 metric correlation
    4809 
    4810 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4811 1990 points 
    4812 correlation = 0.5259, correlation about mean = 0.217, overlap = 209.1 
    4813 steps = 48, shift = 0.0294, angle = 0.0407 degrees 
    4814  
    4815 Position of 264.pdb map 15 (#18) relative to
    4816 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4817 Matrix rotation and translation 
    4818 0.97089964 0.11837852 -0.20818362 226.00760133 
    4819 0.23804671 -0.57221563 0.78479486 164.81114052 
    4820 -0.02622308 -0.81151446 -0.58374356 160.06091313 
    4821 Axis -0.99082136 -0.11294201 0.07427746 
    4822 Axis point 0.00000000 114.75449368 53.08226296 
    4823 Rotation angle (degrees) 126.33673679 
    4824 Shift along axis -230.65834254 
    4825  
    4826 Average map value = 0.6571 for 8451 atoms, 5269 outside contour 
    4827 
    4828 > fitmap #17 inMap #10 resolution 15 metric correlation
    4829 
    4830 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4831 1990 points 
    4832 correlation = 0.5258, correlation about mean = 0.2171, overlap = 209.1 
    4833 steps = 44, shift = 0.0784, angle = 0.0612 degrees 
    4834  
    4835 Position of 264.pdb map 15 (#18) relative to
    4836 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4837 Matrix rotation and translation 
    4838 0.97076110 0.11943377 -0.20822697 225.97440891 
    4839 0.23869971 -0.57208035 0.78469514 164.84186792 
    4840 -0.02540348 -0.81145522 -0.58386215 160.07366410 
    4841 Axis -0.99077781 -0.11348396 0.07403190 
    4842 Axis point 0.00000000 114.69759073 53.08815784 
    4843 Rotation angle (degrees) 126.34106991 
    4844 Shift along axis -230.74677954 
    4845  
    4846 Average map value = 0.6568 for 8451 atoms, 5266 outside contour 
    4847 
    4848 > fitmap #17 inMap #10 resolution 15 metric correlation
    4849 
    4850 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4851 1990 points 
    4852 correlation = 0.5259, correlation about mean = 0.2171, overlap = 209.1 
    4853 steps = 44, shift = 0.0575, angle = 0.0406 degrees 
    4854  
    4855 Position of 264.pdb map 15 (#18) relative to
    4856 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4857 Matrix rotation and translation 
    4858 0.97081418 0.11874205 -0.20837506 226.00400359 
    4859 0.23841586 -0.57212155 0.78475139 164.82710562 
    4860 -0.02603289 -0.81152768 -0.58373370 160.06084212 
    4861 Axis -0.99079422 -0.11317793 0.07428032 
    4862 Axis point 0.00000000 114.73803355 53.09187428 
    4863 Rotation angle (degrees) 126.33607950 
    4864 Shift along axis -230.68888183 
    4865  
    4866 Average map value = 0.657 for 8451 atoms, 5268 outside contour 
    4867 
    4868 > fitmap #17 inMap #10 resolution 15 metric correlation
    4869 
    4870 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4871 1990 points 
    4872 correlation = 0.5259, correlation about mean = 0.2171, overlap = 209.1 
    4873 steps = 40, shift = 0.00807, angle = 0.0165 degrees 
    4874  
    4875 Position of 264.pdb map 15 (#18) relative to
    4876 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4877 Matrix rotation and translation 
    4878 0.97076642 0.11901597 -0.20844126 226.00848865 
    4879 0.23863031 -0.57206942 0.78472421 164.83565525 
    4880 -0.02584818 -0.81152430 -0.58374660 160.06227230 
    4881 Axis -0.99077911 -0.11333411 0.07424370 
    4882 Axis point 0.00000000 114.72327792 53.09638609 
    4883 Rotation angle (degrees) 126.33638273 
    4884 Shift along axis -230.72237845 
    4885  
    4886 Average map value = 0.6569 for 8451 atoms, 5268 outside contour 
    4887 
    4888 > fitmap #17 inMap #10 resolution 15 metric correlation
    4889 
    4890 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4891 1990 points 
    4892 correlation = 0.5258, correlation about mean = 0.2171, overlap = 209.1 
    4893 steps = 48, shift = 0.0715, angle = 0.0691 degrees 
    4894  
    4895 Position of 264.pdb map 15 (#18) relative to
    4896 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    4897 Matrix rotation and translation 
    4898 0.97057208 0.12018282 -0.20867665 225.98820968 
    4899 0.23950359 -0.57192862 0.78456078 164.86919803 
    4900 -0.02505743 -0.81145158 -0.58388216 160.07620071 
    4901 Axis -0.99071808 -0.11398087 0.07406788 
    4902 Axis point 0.00000000 114.65800493 53.11857939 
    4903 Rotation angle (degrees) 126.34310803 
    4904 Shift along axis -230.82603524 
    4905  
    4906 Average map value = 0.6567 for 8451 atoms, 5262 outside contour 
    4907 
    4908 > color zone #10 near sel & #17 distance 17.8
    4909 
    4910 [Repeated 1 time(s)]
    4911 
    4912 > undo
    4913 
    4914 [Repeated 1 time(s)]
    4915 
    4916 > color zone #10 near sel & #17 distance 17.8
    4917 
    4918 > undo
    4919 
    4920 > color zone #10 near sel & #17 distance 17.8
    4921 
    4922 > undo
    4923 
    4924 > hide #17 models
    4925 
    4926 > show #13 models
    4927 
    4928 > select up
    4929 
    4930 8451 atoms, 9112 bonds, 264 residues, 1 model selected 
    4931 
    4932 > select up
    4933 
    4934 40785 atoms, 43984 bonds, 1272 residues, 30 models selected 
    4935 
    4936 > hide #13 models
    4937 
    4938 > show #13 models
    4939 
    4940 > select subtract #13
    4941 
    4942 30007 atoms, 32360 bonds, 936 residues, 29 models selected 
    4943 
    4944 > select add #13
    4945 
    4946 40785 atoms, 43984 bonds, 1272 residues, 30 models selected 
    4947 
    4948 > select subtract #10
    4949 
    4950 40785 atoms, 43984 bonds, 1272 residues, 28 models selected 
    4951 
    4952 > select subtract #13
    4953 
    4954 30007 atoms, 32360 bonds, 936 residues, 27 models selected 
    4955 
    4956 > select #13:63-68
    4957 
    4958 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4959 
    4960 > color sel magenta
    4961 
    4962 > color sel red
    4963 
    4964 > color sel orange
    4965 
    4966 > color sel hot pink
    4967 
    4968 > color zone #10 near sel & #13 distance 17.8
    4969 
    4970 [Repeated 2 time(s)]
    4971 
    4972 > undo
    4973 
    4974 [Repeated 2 time(s)]
    4975 
    4976 > select add #13
    4977 
    4978 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    4979 
    4980 > select subtract #13
    4981 
    4982 Nothing selected 
    4983 
    4984 > select #13:63-68
    4985 
    4986 189 atoms, 203 bonds, 6 residues, 1 model selected 
    4987 
    4988 > color sel lime
    4989 
    4990 > color zone #10 near sel & #13 distance 17.8
    4991 
    4992 > undo
    4993 
    4994 > fitmap #17 inMap #10 resolution 15 metric correlation
    4995 
    4996 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    4997 1990 points 
    4998 correlation = 0.4926, correlation about mean = 0.2211, overlap = 185.8 
    4999 steps = 224, shift = 11.2, angle = 37.9 degrees 
    5000  
    5001 Position of 264.pdb map 15 (#18) relative to
    5002 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5003 Matrix rotation and translation 
    5004 -0.83127446 -0.24575983 0.49858286 152.46856328 
    5005 0.40650300 0.34299872 0.84682179 221.25480560 
    5006 -0.37912807 0.90661673 -0.18522397 237.12641867 
    5007 Axis 0.05459875 0.80143761 0.59558101 
    5008 Axis point 76.59246794 0.00000000 11.31247479 
    5009 Rotation angle (degrees) 146.79848712 
    5010 Shift along axis 326.87450625 
    5011  
    5012 Average map value = 0.6062 for 8451 atoms, 5639 outside contour 
    5013 
    5014 > fitmap #17 inMap #10 resolution 15 metric correlation
    5015 
    5016 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5017 1990 points 
    5018 correlation = 0.4926, correlation about mean = 0.2213, overlap = 185.8 
    5019 steps = 40, shift = 0.0261, angle = 0.141 degrees 
    5020  
    5021 Position of 264.pdb map 15 (#18) relative to
    5022 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5023 Matrix rotation and translation 
    5024 -0.82994486 -0.24712786 0.50011933 152.42747177 
    5025 0.40755973 0.34353481 0.84609624 221.33172300 
    5026 -0.38090236 0.90604170 -0.18439559 237.05227190 
    5027 Axis 0.05453175 0.80145605 0.59556233 
    5028 Axis point 76.60072454 0.00000000 11.14318975 
    5029 Rotation angle (degrees) 146.65780561 
    5030 Shift along axis 326.87918837 
    5031  
    5032 Average map value = 0.6062 for 8451 atoms, 5646 outside contour 
    5033 
    5034 > fitmap #17 inMap #10 resolution 15 metric correlation
    5035 
    5036 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5037 1990 points 
    5038 correlation = 0.4926, correlation about mean = 0.2213, overlap = 185.8 
    5039 steps = 28, shift = 0.0242, angle = 0.0546 degrees 
    5040  
    5041 Position of 264.pdb map 15 (#18) relative to
    5042 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5043 Matrix rotation and translation 
    5044 -0.82964743 -0.24672036 0.50081353 152.46432348 
    5045 0.40842107 0.34337018 0.84574765 221.34543772 
    5046 -0.38062762 0.90621515 -0.18411040 237.07068098 
    5047 Axis 0.05497488 0.80137467 0.59563109 
    5048 Axis point 76.55223882 0.00000000 11.13061797 
    5049 Rotation angle (degrees) 146.63602585 
    5050 Shift along axis 326.96900339 
    5051  
    5052 Average map value = 0.6062 for 8451 atoms, 5647 outside contour 
    5053 
    5054 > fitmap #17 inMap #10 resolution 15 metric correlation
    5055 
    5056 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5057 1990 points 
    5058 correlation = 0.5262, correlation about mean = 0.2273, overlap = 213.9 
    5059 steps = 124, shift = 15.2, angle = 35.8 degrees 
    5060  
    5061 Position of 264.pdb map 15 (#18) relative to
    5062 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5063 Matrix rotation and translation 
    5064 -0.87256919 -0.24873167 0.42042309 152.68200991 
    5065 0.45101475 -0.07961556 0.88895839 188.03441870 
    5066 -0.18763987 0.96529468 0.18165175 236.87642667 
    5067 Axis 0.08206719 0.65371292 0.75227947 
    5068 Axis point 66.20802995 11.91116012 0.00000000 
    5069 Rotation angle (degrees) 152.28433559 
    5070 Shift along axis 313.64798447 
    5071  
    5072 Average map value = 0.6834 for 8451 atoms, 5206 outside contour 
    5073 
    5074 > fitmap #17 inMap #10 resolution 15 metric correlation
    5075 
    5076 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5077 1990 points 
    5078 correlation = 0.5262, correlation about mean = 0.2273, overlap = 213.9 
    5079 steps = 40, shift = 0.00577, angle = 0.00231 degrees 
    5080  
    5081 Position of 264.pdb map 15 (#18) relative to
    5082 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5083 Matrix rotation and translation 
    5084 -0.87257981 -0.24873283 0.42040036 152.67716582 
    5085 0.45099895 -0.07965223 0.88896312 188.03426866 
    5086 -0.18762848 0.96529135 0.18168119 236.87365958 
    5087 Axis 0.08206153 0.65370012 0.75229121 
    5088 Axis point 66.20573157 11.91426461 0.00000000 
    5089 Rotation angle (degrees) 152.28543502 
    5090 Shift along axis 313.64491631 
    5091  
    5092 Average map value = 0.6834 for 8451 atoms, 5206 outside contour 
    5093 
    5094 > fitmap #17 inMap #10 resolution 15 metric correlation
    5095 
    5096 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5097 1990 points 
    5098 correlation = 0.5262, correlation about mean = 0.2274, overlap = 213.9 
    5099 steps = 40, shift = 0.0106, angle = 0.00969 degrees 
    5100  
    5101 Position of 264.pdb map 15 (#18) relative to
    5102 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5103 Matrix rotation and translation 
    5104 -0.87255215 -0.24889469 0.42036196 152.66100672 
    5105 0.45098881 -0.07964161 0.88896922 188.03731384 
    5106 -0.18778140 0.96525051 0.18174019 236.86722024 
    5107 Axis 0.08199474 0.65369312 0.75230457 
    5108 Axis point 66.20712209 11.92677700 0.00000000 
    5109 Rotation angle (degrees) 152.27944350 
    5110 Shift along axis 313.63239007 
    5111  
    5112 Average map value = 0.6834 for 8451 atoms, 5203 outside contour 
    5113 
    5114 > fitmap #17 inMap #10 resolution 15 metric correlation
    5115 
    5116 Fit map 264.pdb map 15 in map cryosparc_P12_J2768_004_volume_map.mrc using
    5117 1990 points 
    5118 correlation = 0.5262, correlation about mean = 0.2272, overlap = 213.9 
    5119 steps = 44, shift = 0.0681, angle = 0.0658 degrees 
    5120  
    5121 Position of 264.pdb map 15 (#18) relative to
    5122 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5123 Matrix rotation and translation 
    5124 -0.87264251 -0.24787056 0.42077933 152.76324972 
    5125 0.45126112 -0.07986565 0.88881091 188.01414886 
    5126 -0.18670423 0.96549550 0.18154852 236.90488386 
    5127 Axis 0.08251372 0.65366102 0.75227572 
    5128 Axis point 66.18239280 11.86527678 0.00000000 
    5129 Rotation angle (degrees) 152.31062692 
    5130 Shift along axis 313.72037563 
    5131  
    5132 Average map value = 0.6834 for 8451 atoms, 5208 outside contour 
    5133 
    5134 > fitmap #13 inMap #10 resolution 15 metric correlation
    5135 
    5136 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5137 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5138 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    5139 steps = 140, shift = 33, angle = 3.45 degrees 
    5140  
    5141 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5142 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5143 Matrix rotation and translation 
    5144 0.99668320 0.07833475 -0.02205220 227.55746733 
    5145 0.07476767 -0.77445274 0.62819799 154.57941129 
    5146 0.03213132 -0.62776318 -0.77774093 174.23976967 
    5147 Axis -0.99906670 -0.04310081 -0.00283747 
    5148 Axis point 0.00000000 103.09548889 61.23210838 
    5149 Rotation angle (degrees) 141.05550500 
    5150 Shift along axis -234.50198593 
    5151  
    5152 Average map value = 0.5294 for 10778 atoms, 7660 outside contour 
    5153 
    5154 > fitmap #13 inMap #10 resolution 15 metric correlation
    5155 
    5156 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5157 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5158 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5159 steps = 108, shift = 29.7, angle = 0.0181 degrees 
    5160  
    5161 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5162 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5163 Matrix rotation and translation 
    5164 0.99666382 0.07857607 -0.02206961 227.52540657 
    5165 0.07495977 -0.77431023 0.62835076 154.59834916 
    5166 0.03228458 -0.62790880 -0.77761701 174.24028712 
    5167 Axis -0.99906118 -0.04322607 -0.00287593 
    5168 Axis point 0.00000000 103.09962918 61.22169675 
    5169 Rotation angle (degrees) 141.04424694 
    5170 Shift along axis -234.49558197 
    5171  
    5172 Average map value = 0.5294 for 10778 atoms, 7661 outside contour 
    5173 
    5174 > fitmap #13 inMap #10 resolution 15 metric correlation
    5175 
    5176 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5177 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5178 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5179 steps = 152, shift = 32.9, angle = 0.032 degrees 
    5180  
    5181 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5182 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5183 Matrix rotation and translation 
    5184 0.99667459 0.07855148 -0.02166698 227.51452118 
    5185 0.07470044 -0.77457478 0.62805551 154.57456179 
    5186 0.03255197 -0.62758551 -0.77786682 174.28130355 
    5187 Axis -0.99906434 -0.04313989 -0.00306412 
    5188 Axis point 0.00000000 103.07757349 61.23786242 
    5189 Rotation angle (degrees) 141.06719852 
    5190 Shift along axis -234.50399426 
    5191  
    5192 Average map value = 0.5293 for 10778 atoms, 7659 outside contour 
    5193 
    5194 > fitmap #13 inMap #10 resolution 15 metric correlation
    5195 
    5196 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5197 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5198 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    5199 steps = 160, shift = 32.1, angle = 0.0233 degrees 
    5200  
    5201 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5202 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5203 Matrix rotation and translation 
    5204 0.99668220 0.07836083 -0.02200468 227.56483627 
    5205 0.07476018 -0.77449369 0.62814840 154.58100151 
    5206 0.03217972 -0.62770941 -0.77778233 174.23701553 
    5207 Axis -0.99906644 -0.04310505 -0.00286440 
    5208 Axis point 0.00000000 103.09079823 61.23033444 
    5209 Rotation angle (degrees) 141.05930385 
    5210 Shift along axis -234.51469756 
    5211  
    5212 Average map value = 0.5294 for 10778 atoms, 7658 outside contour 
    5213 
    5214 > fitmap #13 inMap #10 resolution 15 metric correlation
    5215 
    5216 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5217 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5218 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    5219 steps = 136, shift = 33.3, angle = 0.0177 degrees 
    5220  
    5221 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5222 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5223 Matrix rotation and translation 
    5224 0.99668771 0.07826122 -0.02210956 227.56369928 
    5225 0.07473981 -0.77432347 0.62836064 154.57997412 
    5226 0.03205630 -0.62793179 -0.77760789 174.22746234 
    5227 Axis -0.99906790 -0.04307545 -0.00280040 
    5228 Axis point 0.00000000 103.10822464 61.22038495 
    5229 Rotation angle (degrees) 141.04334641 
    5230 Shift along axis -234.49809657 
    5231  
    5232 Average map value = 0.5294 for 10778 atoms, 7656 outside contour 
    5233 
    5234 > fitmap #13 inMap #10 resolution 15 metric correlation
    5235 
    5236 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5237 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5238 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5239 steps = 48, shift = 0.0613, angle = 0.0451 degrees 
    5240  
    5241 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5242 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5243 Matrix rotation and translation 
    5244 0.99667560 0.07856845 -0.02155893 227.51219091 
    5245 0.07464835 -0.77462734 0.62799688 154.57036059 
    5246 0.03264058 -0.62751851 -0.77791715 174.28709910 
    5247 Axis -0.99906465 -0.04312876 -0.00311939 
    5248 Axis point 0.00000000 103.07155191 61.23809877 
    5249 Rotation angle (degrees) 141.07184365 
    5250 Shift along axis -234.50948426 
    5251  
    5252 Average map value = 0.5293 for 10778 atoms, 7660 outside contour 
    5253 
    5254 > fitmap #13 inMap #10 resolution 15 metric correlation
    5255 
    5256 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5257 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5258 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5259 steps = 60, shift = 0.0564, angle = 0.0264 degrees 
    5260  
    5261 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5262 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5263 Matrix rotation and translation 
    5264 0.99666199 0.07869728 -0.02171759 227.56879183 
    5265 0.07483469 -0.77435294 0.62831303 154.58294676 
    5266 0.03262943 -0.62784095 -0.77765741 174.24701383 
    5267 Axis -0.99906068 -0.04322397 -0.00307205 
    5268 Axis point 0.00000000 103.08094966 61.20861920 
    5269 Rotation angle (degrees) 141.04811715 
    5270 Shift along axis -234.57201730 
    5271  
    5272 Average map value = 0.5293 for 10778 atoms, 7659 outside contour 
    5273 
    5274 > fitmap #13 inMap #10 resolution 15 metric correlation
    5275 
    5276 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5277 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5278 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    5279 steps = 48, shift = 0.0134, angle = 0.0477 degrees 
    5280  
    5281 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5282 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5283 Matrix rotation and translation 
    5284 0.99667523 0.07833588 -0.02240576 227.57412616 
    5285 0.07499519 -0.77452744 0.62807877 154.58851477 
    5286 0.03184720 -0.62767088 -0.77782710 174.22633066 
    5287 Axis -0.99906450 -0.04316323 -0.00265783 
    5288 Axis point 0.00000000 103.09114363 61.25217043 
    5289 Rotation angle (degrees) 141.06320093 
    5290 Shift along axis -234.49683348 
    5291  
    5292 Average map value = 0.5294 for 10778 atoms, 7661 outside contour 
    5293 
    5294 > fitmap #13 inMap #10 resolution 15 metric correlation
    5295 
    5296 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5297 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5298 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5299 steps = 48, shift = 0.064, angle = 0.0648 degrees 
    5300  
    5301 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5302 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5303 Matrix rotation and translation 
    5304 0.99667880 0.07859644 -0.02130729 227.51607877 
    5305 0.07450591 -0.77451764 0.62814909 154.56380294 
    5306 0.03286739 -0.62765040 -0.77780119 174.28579258 
    5307 Axis -0.99906549 -0.04309928 -0.00325427 
    5308 Axis point 0.00000000 103.07457986 61.21480821 
    5309 Rotation angle (degrees) 141.06141017 
    5310 Shift along axis -234.53222544 
    5311  
    5312 Average map value = 0.5293 for 10778 atoms, 7660 outside contour 
    5313 
    5314 > fitmap #13 inMap #10 resolution 15 metric correlation
    5315 
    5316 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5317 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5318 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5319 steps = 68, shift = 3.31, angle = 0.0194 degrees 
    5320  
    5321 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5322 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5323 Matrix rotation and translation 
    5324 0.99667653 0.07853556 -0.02163534 227.52996776 
    5325 0.07466646 -0.77454375 0.62809782 154.57238318 
    5326 0.03257048 -0.62762580 -0.77783353 174.27175812 
    5327 Axis -0.99906487 -0.04312663 -0.00307829 
    5328 Axis point 0.00000000 103.07793789 61.22927823 
    5329 Rotation angle (degrees) 141.06417807 
    5330 Shift along axis -234.51984298 
    5331  
    5332 Average map value = 0.5293 for 10778 atoms, 7663 outside contour 
    5333 
    5334 > fitmap #13 inMap #10 resolution 15 metric correlation
    5335 
    5336 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5337 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5338 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    5339 steps = 52, shift = 2.67, angle = 0.0398 degrees 
    5340  
    5341 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5342 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5343 Matrix rotation and translation 
    5344 0.99668827 0.07823432 -0.02217908 227.57390017 
    5345 0.07476355 -0.77434126 0.62833590 154.57968221 
    5346 0.03198323 -0.62791321 -0.77762591 174.22069137 
    5347 Axis -0.99906807 -0.04307413 -0.00276024 
    5348 Axis point 0.00000000 103.10710356 61.22272364 
    5349 Rotation angle (degrees) 141.04495161 
    5350 Shift along axis -234.50109186 
    5351  
    5352 Average map value = 0.5294 for 10778 atoms, 7658 outside contour 
    5353 
    5354 > fitmap #13 inMap #10 resolution 15 metric correlation
    5355 
    5356 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5357 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5358 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5359 steps = 100, shift = 19.8, angle = 0.0467 degrees 
    5360  
    5361 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5362 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5363 Matrix rotation and translation 
    5364 0.99667808 0.07854479 -0.02153052 227.51785920 
    5365 0.07461025 -0.77459435 0.62804209 154.56900250 
    5366 0.03265200 -0.62756219 -0.77788144 174.28144484 
    5367 Axis -0.99906533 -0.04311221 -0.00313066 
    5368 Axis point 0.00000000 103.07391390 61.23128666 
    5369 Rotation angle (degrees) 141.06859854 
    5370 Shift along axis -234.51463197 
    5371  
    5372 Average map value = 0.5293 for 10778 atoms, 7660 outside contour 
    5373 
    5374 > fitmap #13 inMap #10 resolution 15 metric correlation
    5375 
    5376 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5377 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5378 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.1 
    5379 steps = 80, shift = 14.4, angle = 0.03 degrees 
    5380  
    5381 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5382 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5383 Matrix rotation and translation 
    5384 0.99667779 0.07842246 -0.02198481 227.56647300 
    5385 0.07479272 -0.77443407 0.62821803 154.58576448 
    5386 0.03224059 -0.62777527 -0.77772665 174.23404524 
    5387 Axis -0.99906517 -0.04313296 -0.00288723 
    5388 Axis point 0.00000000 103.09283100 61.22301731 
    5389 Rotation angle (degrees) 141.05424959 
    5390 Shift along axis -234.52453162 
    5391  
    5392 Average map value = 0.5294 for 10778 atoms, 7657 outside contour 
    5393 
    5394 > fitmap #13 inMap #10 resolution 15 metric correlation
    5395 
    5396 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5397 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5398 correlation = 0.4553, correlation about mean = 0.2033, overlap = 208.2 
    5399 steps = 56, shift = 4.98, angle = 0.0214 degrees 
    5400  
    5401 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5402 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5403 Matrix rotation and translation 
    5404 0.99668795 0.07820770 -0.02228706 227.55843416 
    5405 0.07481706 -0.77446398 0.62817826 154.58061594 
    5406 0.03186783 -0.62776516 -0.77775017 174.22941440 
    5407 Axis -0.99906804 -0.04307871 -0.00269716 
    5408 Axis point 0.00000000 103.10194465 61.24211928 
    5409 Rotation angle (degrees) 141.05622184 
    5410 Shift along axis -234.47541602 
    5411  
    5412 Average map value = 0.5294 for 10778 atoms, 7660 outside contour 
    5413 
    5414 > fitmap #13 inMap #10 resolution 15 metric correlation
    5415 
    5416 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5417 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5418 correlation = 0.4553, correlation about mean = 0.2032, overlap = 208.1 
    5419 steps = 48, shift = 0.0598, angle = 0.0424 degrees 
    5420  
    5421 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5422 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5423 Matrix rotation and translation 
    5424 0.99667263 0.07857290 -0.02167954 227.51101750 
    5425 0.07472655 -0.77460288 0.62801775 154.57550162 
    5426 0.03255212 -0.62754815 -0.77789695 174.28521848 
    5427 Axis -0.99906381 -0.04315256 -0.00306057 
    5428 Axis point 0.00000000 103.07519090 61.24250511 
    5429 Rotation angle (degrees) 141.06994262 
    5430 Shift along axis -234.50176502 
    5431  
    5432 Average map value = 0.5293 for 10778 atoms, 7659 outside contour 
    5433 
    5434 > select add #13
    5435 
    5436 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    5437 
    5438 > hide #13 models
    5439 
    5440 > select subtract #13
    5441 
    5442 Nothing selected 
    5443 
    5444 > hide #!10 models
    5445 
    5446 > tile
    5447 
    5448 1 model tiled 
    5449 
    5450 > open
    5451 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_00_final_volume.mrc
    5452 
    5453 Opened cryosparc_P12_J2761_class_00_final_volume.mrc as #19, grid size
    5454 128,128,128, pixel 2.96, shown at level 0.147, step 1, values float32 
    5455 
    5456 > open
    5457 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_01_final_volume.mrc
    5458 
    5459 Opened cryosparc_P12_J2761_class_01_final_volume.mrc as #20, grid size
    5460 128,128,128, pixel 2.96, shown at level 0.12, step 1, values float32 
    5461 
    5462 > open
    5463 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_02_final_volume.mrc
    5464 
    5465 Opened cryosparc_P12_J2761_class_02_final_volume.mrc as #21, grid size
    5466 128,128,128, pixel 2.96, shown at level 0.113, step 1, values float32 
    5467 
    5468 > open
    5469 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_03_final_volume.mrc
    5470 
    5471 Opened cryosparc_P12_J2761_class_03_final_volume.mrc as #22, grid size
    5472 128,128,128, pixel 2.96, shown at level 0.117, step 1, values float32 
    5473 
    5474 > open
    5475 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_04_final_volume.mrc
    5476 
    5477 Opened cryosparc_P12_J2761_class_04_final_volume.mrc as #23, grid size
    5478 128,128,128, pixel 2.96, shown at level 0.121, step 1, values float32 
    5479 
    5480 > open
    5481 > /Users/francescappadoo/Downloads/cryosparc_P12_J2761_class_05_final_volume.mrc
    5482 
    5483 Opened cryosparc_P12_J2761_class_05_final_volume.mrc as #24, grid size
    5484 128,128,128, pixel 2.96, shown at level 0.13, step 1, values float32 
    5485 
    5486 > tile
    5487 
    5488 7 models tiled 
    5489 
    5490 > tile
    5491 
    5492 7 models tiled 
    5493 
    5494 > tile
    5495 
    5496 7 models tiled 
    5497 
    5498 > volume #19 level 0.2731
    5499 
    5500 > volume #20 level 0.273
    5501 
    5502 > volume #21 level 0.273
    5503 
    5504 > volume #22 level 0.273
    5505 
    5506 > volume #23 level 0.273
    5507 
    5508 > volume #24 level 0.273
    5509 
    5510 > tile
    5511 
    5512 7 models tiled 
    5513 
    5514 > surface dust #19 size 29.6
    5515 
    5516 > surface dust #20 size 29.6
    5517 
    5518 > surface dust #21 size 29.6
    5519 
    5520 > surface dust #22 size 29.6
    5521 
    5522 > surface dust #23 size 29.6
    5523 
    5524 > surface dust #24 size 29.6
    5525 
    5526 > volume #21 level 0.5133
    5527 
    5528 > tile
    5529 
    5530 7 models tiled 
    5531 
    5532 > tile
    5533 
    5534 7 models tiled 
    5535 
    5536 > volume #20 level 0.5
    5537 
    5538 > volume #19 level 0.5
    5539 
    5540 > volume #22 level 0.5
    5541 
    5542 > volume #23 level 0.5
    5543 
    5544 > volume #24 level 0.5
    5545 
    5546 > close #24
    5547 
    5548 > close #23
    5549 
    5550 > close #22
    5551 
    5552 > close #21
    5553 
    5554 > close #20
    5555 
    5556 > close #19
    5557 
    5558 > show #!12 models
    5559 
    5560 > tile
    5561 
    5562 2 models tiled 
    5563 
    5564 > hide #!12 models
    5565 
    5566 > show #!10 models
    5567 
    5568 > tile
    5569 
    5570 2 models tiled 
    5571 
    5572 > tile
    5573 
    5574 2 models tiled 
    5575 
    5576 > tile
    5577 
    5578 2 models tiled 
    5579 
    5580 > ui tool show "Scale Bar"
    5581 
    5582 > scalebar off
    5583 
    5584 > scalebar 50
    5585 
    5586 > save /Users/francescappadoo/Desktop/image21.png supersample 3
    5587 
    5588 > movie record
    5589 
    5590 > turn y 2 180
    5591 
    5592 > wait 180
    5593 
    5594 > movie encode /Users/francescappadoo/Desktop/movie7.mp4
    5595 
    5596 Movie saved to /Users/francescappadoo/Desktop/movie7.mp4 
    5597  
    5598 
    5599 > tile
    5600 
    5601 2 models tiled 
    5602 
    5603 > show #13 models
    5604 
    5605 > fitmap #13 inMap #10 search 200 resolution 15
    5606 
    5607 Found 107 unique fits from 200 random placements having fraction of points
    5608 inside contour >= 0.100 (199 of 200). 
    5609  
    5610 Correlations and times found: 
    5611 0.4819 (4), 0.4674 (1), 0.4673 (4), 0.4642 (5), 0.4632 (5), 0.4603 (4), 0.4597
    5612 (8), 0.4588 (1), 0.4577 (2), 0.4572 (4), 0.4571 (1), 0.4555 (1), 0.4552 (3),
    5613 0.4515 (2), 0.45 (2), 0.4473 (6), 0.447 (3), 0.4461 (1), 0.4416 (5), 0.4411
    5614 (2), 0.4397 (2), 0.4377 (1), 0.4371 (3), 0.4355 (3), 0.435 (8), 0.4349 (2),
    5615 0.4344 (6), 0.4342 (1), 0.4331 (1), 0.4324 (2), 0.4315 (4), 0.4315 (1), 0.4298
    5616 (1), 0.4291 (1), 0.4276 (2), 0.4274 (2), 0.4244 (2), 0.4242 (1), 0.4218 (2),
    5617 0.4213 (1), 0.4208 (1), 0.4203 (1), 0.4177 (1), 0.4155 (2), 0.4152 (1), 0.4145
    5618 (2), 0.4143 (1), 0.4133 (1), 0.4112 (2), 0.4105 (1), 0.4103 (1), 0.4102 (1),
    5619 0.4098 (1), 0.4095 (1), 0.4094 (1), 0.4089 (1), 0.4078 (1), 0.4071 (3), 0.4069
    5620 (2), 0.4066 (1), 0.4053 (1), 0.4045 (1), 0.4044 (4), 0.4043 (1), 0.4042 (1),
    5621 0.4023 (1), 0.4015 (2), 0.4012 (1), 0.4011 (2), 0.3992 (1), 0.3975 (1), 0.3965
    5622 (1), 0.3952 (3), 0.3939 (1), 0.3936 (1), 0.3915 (1), 0.39 (1), 0.3872 (1),
    5623 0.3863 (1), 0.3861 (1), 0.3858 (2), 0.3851 (1), 0.3851 (1), 0.385 (1), 0.385
    5624 (3), 0.3843 (1), 0.3824 (1), 0.3811 (1), 0.379 (1), 0.3785 (1), 0.3784 (2),
    5625 0.3755 (1), 0.3745 (2), 0.3741 (1), 0.3718 (3), 0.3702 (1), 0.3685 (1), 0.3646
    5626 (1), 0.3629 (1), 0.3579 (1), 0.3577 (1), 0.3562 (1), 0.353 (1), 0.3465 (3),
    5627 0.3379 (1), 0.326 (1), 0.317 (1) 
    5628  
    5629 Best fit found: 
    5630 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5631 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5632 correlation = 0.4819, correlation about mean = 0.2294, overlap = 224.8 
    5633 steps = 172, shift = 25.4, angle = 53.4 degrees 
    5634 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5635 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5636 Matrix rotation and translation 
    5637 0.42971040 0.03186213 0.90240439 185.85081044 
    5638 0.67363429 -0.67681681 -0.29687666 174.46902513 
    5639 0.60130342 0.73546157 -0.31229866 231.80470154 
    5640 Axis 0.82435372 0.24043835 0.51247473 
    5641 Axis point 0.00000000 44.99840516 79.25627709 
    5642 Rotation angle (degrees) 141.23335060 
    5643 Shift along axis 313.94990295 
    5644  
    5645 Found 107 fits. 
    5646 
    5647 > ui tool show "Fit in Map"
    5648 
    5649 > fitmap #13 inMap #10 resolution 15
    5650 
    5651 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5652 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5653 correlation = 0.4818, correlation about mean = 0.2293, overlap = 224.8 
    5654 steps = 36, shift = 0.0488, angle = 0.025 degrees 
    5655  
    5656 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5657 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5658 Matrix rotation and translation 
    5659 0.43006982 0.03173510 0.90223763 185.89214590 
    5660 0.67355147 -0.67673155 -0.29725870 174.48638675 
    5661 0.60113922 0.73554552 -0.31241705 231.83723162 
    5662 Axis 0.82445840 0.24035834 0.51234385 
    5663 Axis point 0.00000000 44.99671949 79.29541528 
    5664 Rotation angle (degrees) 141.21842447 
    5665 Shift along axis 313.97997902 
    5666  
    5667 Average map value = 0.5643 for 10778 atoms, 7426 outside contour 
    5668 
    5669 > fitmap #13 inMap #10 resolution 15
    5670 
    5671 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5672 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5673 correlation = 0.4818, correlation about mean = 0.2293, overlap = 224.8 
    5674 steps = 48, shift = 0.0129, angle = 0.0332 degrees 
    5675  
    5676 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5677 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5678 Matrix rotation and translation 
    5679 0.42956656 0.03187923 0.90247226 185.88814977 
    5680 0.67371685 -0.67677932 -0.29677477 174.48307707 
    5681 0.60131370 0.73549533 -0.31219936 231.82671379 
    5682 Axis 0.82430508 0.24048602 0.51253059 
    5683 Axis point 0.00000000 44.99760600 79.24387100 
    5684 Rotation angle (degrees) 141.23367280 
    5685 Shift along axis 314.00757042 
    5686  
    5687 Average map value = 0.5643 for 10778 atoms, 7423 outside contour 
    5688 
    5689 > fitmap #13 inMap #10 resolution 15
    5690 
    5691 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5692 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5693 correlation = 0.4674, correlation about mean = 0.2145, overlap = 213.4 
    5694 steps = 44, shift = 0.0502, angle = 0.0178 degrees 
    5695  
    5696 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5697 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5698 Matrix rotation and translation 
    5699 0.65473302 0.22703651 0.72095700 204.62053073 
    5700 0.73940564 0.00555774 -0.67323720 223.88993598 
    5701 -0.15685628 0.97387039 -0.16423325 216.29790688 
    5702 Axis 0.85101196 0.45354026 0.26472604 
    5703 Axis point 0.00000000 -0.78429236 109.42560915 
    5704 Rotation angle (degrees) 104.59419168 
    5705 Shift along axis 332.93730661 
    5706  
    5707 Average map value = 0.5427 for 10778 atoms, 7557 outside contour 
    5708 
    5709 > fitmap #13 inMap #10 resolution 15
    5710 
    5711 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5712 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5713 correlation = 0.4589, correlation about mean = 0.202, overlap = 209 
    5714 steps = 76, shift = 0.0282, angle = 0.0186 degrees 
    5715  
    5716 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5717 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5718 Matrix rotation and translation 
    5719 0.79888372 0.55944586 -0.22091860 248.30204670 
    5720 0.56221543 -0.56399820 0.60483035 180.42433001 
    5721 0.21377220 -0.60739302 -0.76509813 180.72906724 
    5722 Axis -0.94130758 -0.33754319 0.00215061 
    5723 Axis point 0.00000000 80.83555026 74.93232863 
    5724 Rotation angle (degrees) 139.91645116 
    5725 Shift along axis -294.24092668 
    5726  
    5727 Average map value = 0.5233 for 10778 atoms, 7737 outside contour 
    5728 
    5729 > fitmap #13 inMap #10 resolution 15
    5730 
    5731 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5732 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5733 correlation = 0.4588, correlation about mean = 0.2019, overlap = 209 
    5734 steps = 100, shift = 0.0452, angle = 0.0273 degrees 
    5735  
    5736 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5737 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5738 Matrix rotation and translation 
    5739 0.79891893 0.55939899 -0.22090997 248.25754430 
    5740 0.56227525 -0.56431388 0.60448019 180.42394958 
    5741 0.21348310 -0.60714293 -0.76537730 180.74406701 
    5742 Axis -0.94132777 -0.33748635 0.00223461 
    5743 Axis point 0.00000000 80.83497749 74.95454577 
    5744 Rotation angle (degrees) 139.94135686 
    5745 Shift along axis -294.17844832 
    5746  
    5747 Average map value = 0.5232 for 10778 atoms, 7737 outside contour 
    5748 
    5749 > fitmap #13 inMap #10 resolution 15
    5750 
    5751 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5752 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5753 correlation = 0.4589, correlation about mean = 0.202, overlap = 209 
    5754 steps = 40, shift = 0.0373, angle = 0.113 degrees 
    5755  
    5756 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5757 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5758 Matrix rotation and translation 
    5759 0.79775547 0.56082463 -0.22149907 248.31231560 
    5760 0.56363080 -0.56303304 0.60441213 180.52732821 
    5761 0.21425797 -0.60701684 -0.76526078 180.78155596 
    5762 Axis -0.94097361 -0.33847291 0.00217968 
    5763 Axis point 0.00000000 80.75727764 75.00429927 
    5764 Rotation angle (degrees) 139.93094629 
    5765 Shift along axis -294.36490032 
    5766  
    5767 Average map value = 0.5232 for 10778 atoms, 7734 outside contour 
    5768 
    5769 > fitmap #13 inMap #10 resolution 15
    5770 
    5771 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5772 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5773 correlation = 0.4589, correlation about mean = 0.2021, overlap = 209 
    5774 steps = 60, shift = 0.0366, angle = 0.0831 degrees 
    5775  
    5776 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5777 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5778 Matrix rotation and translation 
    5779 0.79859974 0.55968124 -0.22134871 248.28823728 
    5780 0.56271735 -0.56386127 0.60449116 180.47781268 
    5781 0.21351246 -0.60730330 -0.76524187 180.71515324 
    5782 Axis -0.94122711 -0.33776613 0.00235821 
    5783 Axis point 0.00000000 80.83136865 74.95848060 
    5784 Rotation angle (degrees) 139.92939005 
    5785 Shift along axis -294.22874855 
    5786  
    5787 Average map value = 0.5233 for 10778 atoms, 7737 outside contour 
    5788 
    5789 > fitmap #13 inMap #10 resolution 15
    5790 
    5791 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5792 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5793 correlation = 0.4588, correlation about mean = 0.2019, overlap = 209 
    5794 steps = 60, shift = 0.0496, angle = 0.0421 degrees 
    5795  
    5796 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5797 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5798 Matrix rotation and translation 
    5799 0.79884777 0.55957905 -0.22071118 248.28198186 
    5800 0.56219873 -0.56403595 0.60481067 180.41562269 
    5801 0.21395040 -0.60723524 -0.76517355 180.75993868 
    5802 Axis -0.94129932 -0.33756695 0.00203449 
    5803 Axis point 0.00000000 80.82461992 74.93824769 
    5804 Rotation angle (degrees) 139.92308657 
    5805 Shift along axis -294.24225818 
    5806  
    5807 Average map value = 0.5232 for 10778 atoms, 7737 outside contour 
    5808 
    5809 > fitmap #13 inMap #10 resolution 15
    5810 
    5811 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5812 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5813 correlation = 0.4589, correlation about mean = 0.2021, overlap = 209 
    5814 steps = 76, shift = 0.0348, angle = 0.0166 degrees 
    5815  
    5816 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5817 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5818 Matrix rotation and translation 
    5819 0.79883709 0.55949196 -0.22097048 248.30088709 
    5820 0.56229368 -0.56398402 0.60477084 180.43974738 
    5821 0.21374067 -0.60736373 -0.76513020 180.72466097 
    5822 Axis -0.94129466 -0.33757908 0.00217570 
    5823 Axis point 0.00000000 80.83644833 74.93368965 
    5824 Rotation angle (degrees) 139.91932136 
    5825 Shift along axis -294.24378006 
    5826  
    5827 Average map value = 0.5233 for 10778 atoms, 7736 outside contour 
    5828 
    5829 > fitmap #13 inMap #10 resolution 15
    5830 
    5831 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5832 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5833 correlation = 0.4588, correlation about mean = 0.202, overlap = 209 
    5834 steps = 44, shift = 0.0251, angle = 0.0539 degrees 
    5835  
    5836 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5837 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5838 Matrix rotation and translation 
    5839 0.79938281 0.55881560 -0.22070831 248.26588042 
    5840 0.56166959 -0.56460740 0.60476912 180.40168008 
    5841 0.21334093 -0.60740723 -0.76520723 180.70188211 
    5842 Axis -0.94146151 -0.33711321 0.00221661 
    5843 Axis point 0.00000000 80.87810265 74.90788907 
    5844 Rotation angle (degrees) 139.92620484 
    5845 Shift along axis -294.14801425 
    5846  
    5847 Average map value = 0.5233 for 10778 atoms, 7735 outside contour 
    5848 
    5849 > fitmap #13 inMap #10 resolution 15
    5850 
    5851 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5852 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5853 correlation = 0.4577, correlation about mean = 0.2071, overlap = 207.9 
    5854 steps = 44, shift = 0.0649, angle = 0.115 degrees 
    5855  
    5856 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5857 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5858 Matrix rotation and translation 
    5859 0.58899041 0.76762203 -0.25267887 249.89134862 
    5860 0.75941887 -0.41880953 0.49787697 197.49543119 
    5861 0.27635708 -0.48513390 -0.82962152 190.96591766 
    5862 Axis -0.88055111 -0.47389424 -0.00734814 
    5863 Axis point 0.00000000 64.18316681 86.09078219 
    5864 Rotation angle (degrees) 146.07001966 
    5865 Shift along axis -315.03729590 
    5866  
    5867 Average map value = 0.5159 for 10778 atoms, 7773 outside contour 
    5868 
    5869 > fitmap #13 inMap #10 resolution 15
    5870 
    5871 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5872 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5873 correlation = 0.4572, correlation about mean = 0.2045, overlap = 206.4 
    5874 steps = 64, shift = 4.37, angle = 0.0295 degrees 
    5875  
    5876 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5877 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5878 Matrix rotation and translation 
    5879 0.57460243 0.33271030 0.74775385 205.70478732 
    5880 -0.51954165 -0.55766663 0.64736724 137.15291614 
    5881 0.63238317 -0.76046812 -0.14757971 183.71227892 
    5882 Axis -0.85336769 0.06993261 -0.51659753 
    5883 Axis point 0.00000000 92.12023559 -18.38618748 
    5884 Rotation angle (degrees) 124.42465228 
    5885 Shift along axis -260.85566776 
    5886  
    5887 Average map value = 0.5181 for 10778 atoms, 7613 outside contour 
    5888 
    5889 > fitmap #13 inMap #10 resolution 15
    5890 
    5891 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5892 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5893 correlation = 0.4572, correlation about mean = 0.2045, overlap = 206.4 
    5894 steps = 52, shift = 5.21, angle = 0.0111 degrees 
    5895  
    5896 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5897 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5898 Matrix rotation and translation 
    5899 0.57471414 0.33280092 0.74762766 205.71983909 
    5900 -0.51944801 -0.55758443 0.64751316 137.15631976 
    5901 0.63235858 -0.76048874 -0.14757886 183.70905621 
    5902 Axis -0.85339960 0.06986538 -0.51655392 
    5903 Axis point 0.00000000 92.11526636 -18.38588073 
    5904 Rotation angle (degrees) 124.41788839 
    5905 Shift along axis -260.87438273 
    5906  
    5907 Average map value = 0.5181 for 10778 atoms, 7614 outside contour 
    5908 
    5909 > fitmap #13 inMap #10 resolution 15
    5910 
    5911 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5912 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5913 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    5914 steps = 48, shift = 0.00699, angle = 0.0209 degrees 
    5915  
    5916 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5917 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5918 Matrix rotation and translation 
    5919 0.99568228 0.08726398 -0.03164985 228.14045385 
    5920 0.08779189 -0.77449454 0.62645888 155.40255504 
    5921 0.03015470 -0.62653268 -0.77881161 174.29221404 
    5922 Axis -0.99878562 -0.04926569 0.00042081 
    5923 Axis point 0.00000000 102.85963849 61.80888857 
    5924 Rotation angle (degrees) 141.15192524 
    5925 Shift along axis -235.44607611 
    5926  
    5927 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    5928 
    5929 > fitmap #13 inMap #10 resolution 15
    5930 
    5931 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5932 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5933 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    5934 steps = 40, shift = 0.0229, angle = 0.028 degrees 
    5935  
    5936 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5937 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5938 Matrix rotation and translation 
    5939 0.99567321 0.08719103 -0.03213275 228.12498977 
    5940 0.08803727 -0.77446537 0.62646052 155.42376741 
    5941 0.02973608 -0.62657889 -0.77879052 174.27810976 
    5942 Axis -0.99878305 -0.04931492 0.00067453 
    5943 Axis point 0.00000000 102.87473051 61.82726717 
    5944 Rotation angle (degrees) 141.15004418 
    5945 Shift along axis -235.39452832 
    5946  
    5947 Average map value = 0.5299 for 10778 atoms, 7669 outside contour 
    5948 
    5949 > fitmap #13 inMap #10 resolution 15
    5950 
    5951 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5952 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5953 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    5954 steps = 68, shift = 2.69, angle = 0.02 degrees 
    5955  
    5956 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5957 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5958 Matrix rotation and translation 
    5959 0.99566944 0.08723593 -0.03212753 228.10334276 
    5960 0.08805864 -0.77424529 0.62672949 155.41206212 
    5961 0.02979878 -0.62684457 -0.77857430 174.29713131 
    5962 Axis -0.99878184 -0.04933963 0.00065549 
    5963 Axis point 0.00000000 102.88611069 61.82357556 
    5964 Rotation angle (degrees) 141.13029461 
    5965 Shift along axis -235.37919996 
    5966  
    5967 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    5968 
    5969 > fitmap #13 inMap #10 resolution 15
    5970 
    5971 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5972 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5973 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    5974 steps = 40, shift = 0.00707, angle = 0.0105 degrees 
    5975  
    5976 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5977 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5978 Matrix rotation and translation 
    5979 0.99567942 0.08717375 -0.03198691 228.10556210 
    5980 0.08792505 -0.77431962 0.62665641 155.40272543 
    5981 0.02985994 -0.62676140 -0.77863891 174.30215846 
    5982 Axis -0.99878470 -0.04928260 0.00059868 
    5983 Axis point 0.00000000 102.88130862 61.82314151 
    5984 Rotation angle (degrees) 141.13618225 
    5985 Shift along axis -235.38264380 
    5986  
    5987 Average map value = 0.5298 for 10778 atoms, 7664 outside contour 
    5988 
    5989 > fitmap #13 inMap #10 resolution 15
    5990 
    5991 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    5992 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    5993 correlation = 0.4588, correlation about mean = 0.2019, overlap = 209 
    5994 steps = 92, shift = 4.27, angle = 0.0373 degrees 
    5995  
    5996 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    5997 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    5998 Matrix rotation and translation 
    5999 0.79833746 0.56018045 -0.22103194 248.29085417 
    6000 0.56285748 -0.56358762 0.60461594 180.46630937 
    6001 0.21412323 -0.60709707 -0.76523492 180.77510135 
    6002 Axis -0.94114786 -0.33798874 0.00207927 
    6003 Axis point 0.00000000 80.79151171 74.96947821 
    6004 Rotation angle (degrees) 139.92857241 
    6005 Shift along axis -294.29810498 
    6006  
    6007 Average map value = 0.5232 for 10778 atoms, 7736 outside contour 
    6008 
    6009 > fitmap #13 inMap #10 resolution 15
    6010 
    6011 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6012 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6013 correlation = 0.4589, correlation about mean = 0.2021, overlap = 209 
    6014 steps = 44, shift = 0.0509, angle = 0.0411 degrees 
    6015  
    6016 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6017 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6018 Matrix rotation and translation 
    6019 0.79818658 0.56017682 -0.22158539 248.28230372 
    6020 0.56328306 -0.56361602 0.60419299 180.52167346 
    6021 0.21356589 -0.60707406 -0.76540890 180.73350956 
    6022 Axis -0.94110852 -0.33809603 0.00241344 
    6023 Axis point 0.00000000 80.80217326 74.99156866 
    6024 Rotation angle (degrees) 139.94429618 
    6025 Shift along axis -294.25806382 
    6026  
    6027 Average map value = 0.5233 for 10778 atoms, 7734 outside contour 
    6028 
    6029 > fitmap #13 inMap #10 resolution 15
    6030 
    6031 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6032 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6033 correlation = 0.4577, correlation about mean = 0.2071, overlap = 207.9 
    6034 steps = 44, shift = 0.0648, angle = 0.114 degrees 
    6035  
    6036 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6037 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6038 Matrix rotation and translation 
    6039 0.58898044 0.76763026 -0.25267725 249.89126085 
    6040 0.75942583 -0.41880332 0.49787165 197.49601354 
    6041 0.27635934 -0.48512631 -0.82962526 190.96653522 
    6042 Axis -0.88054826 -0.47389951 -0.00734935 
    6043 Axis point 0.00000000 64.18227260 86.09123812 
    6044 Rotation angle (degrees) 146.07040210 
    6045 Shift along axis -315.03805922 
    6046  
    6047 Average map value = 0.5159 for 10778 atoms, 7773 outside contour 
    6048 
    6049 > fitmap #13 inMap #10 resolution 15
    6050 
    6051 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6052 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6053 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6054 steps = 68, shift = 3.68, angle = 0.0281 degrees 
    6055  
    6056 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6057 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6058 Matrix rotation and translation 
    6059 0.99567788 0.08725833 -0.03180438 228.12663855 
    6060 0.08788730 -0.77454897 0.62637825 155.40468678 
    6061 0.03002272 -0.62646622 -0.77887021 174.30063841 
    6062 Axis -0.99878441 -0.04928939 0.00050142 
    6063 Axis point 0.00000000 102.85861097 61.82645818 
    6064 Rotation angle (degrees) 141.15728725 
    6065 Shift along axis -235.42173511 
    6066  
    6067 Average map value = 0.5298 for 10778 atoms, 7670 outside contour 
    6068 
    6069 > fitmap #13 inMap #10 resolution 15
    6070 
    6071 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6072 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6073 correlation = 0.447, correlation about mean = 0.1915, overlap = 201.8 
    6074 steps = 80, shift = 12.3, angle = 0.0145 degrees 
    6075  
    6076 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6077 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6078 Matrix rotation and translation 
    6079 -0.62232009 -0.25342070 -0.74060491 174.04943070 
    6080 0.56296960 0.51247026 -0.64841303 238.26442870 
    6081 0.54385929 -0.82045855 -0.17625246 179.90261659 
    6082 Axis -0.11232717 -0.83861660 0.53301482 
    6083 Axis point 2.78421493 0.00000000 210.18393586 
    6084 Rotation angle (degrees) 130.01971280 
    6085 Shift along axis -123.47222515 
    6086  
    6087 Average map value = 0.5049 for 10778 atoms, 7587 outside contour 
    6088 
    6089 > fitmap #13 inMap #10 resolution 15
    6090 
    6091 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6092 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6093 correlation = 0.447, correlation about mean = 0.1915, overlap = 201.8 
    6094 steps = 72, shift = 9.67, angle = 0.00596 degrees 
    6095  
    6096 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6097 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6098 Matrix rotation and translation 
    6099 -0.62237040 -0.25343956 -0.74055618 174.04813183 
    6100 0.56296685 0.51239142 -0.64847772 238.26640017 
    6101 0.54380456 -0.82050196 -0.17621924 179.90026731 
    6102 Axis -0.11231919 -0.83859316 0.53305338 
    6103 Axis point 2.78877883 0.00000000 210.18884774 
    6104 Rotation angle (degrees) 130.02330161 
    6105 Shift along axis -123.46107220 
    6106  
    6107 Average map value = 0.5049 for 10778 atoms, 7587 outside contour 
    6108 
    6109 > fitmap #13 inMap #10 resolution 15
    6110 
    6111 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6112 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6113 correlation = 0.447, correlation about mean = 0.1915, overlap = 201.8 
    6114 steps = 48, shift = 2.07, angle = 0.0116 degrees 
    6115  
    6116 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6117 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6118 Matrix rotation and translation 
    6119 -0.62247749 -0.25355164 -0.74042779 174.03496094 
    6120 0.56283438 0.51235162 -0.64862414 238.25559186 
    6121 0.54381911 -0.82049219 -0.17621983 179.89795074 
    6122 Axis -0.11222628 -0.83858666 0.53308318 
    6123 Axis point 2.80846713 0.00000000 210.18436002 
    6124 Rotation angle (degrees) 130.02881918 
    6125 Shift along axis -123.42868436 
    6126  
    6127 Average map value = 0.5049 for 10778 atoms, 7587 outside contour 
    6128 
    6129 > fitmap #13 inMap #10 resolution 15
    6130 
    6131 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6132 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6133 correlation = 0.447, correlation about mean = 0.1915, overlap = 201.8 
    6134 steps = 76, shift = 22.9, angle = 0.00303 degrees 
    6135  
    6136 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6137 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6138 Matrix rotation and translation 
    6139 -0.62245579 -0.25351505 -0.74045856 174.03461779 
    6140 0.56286924 0.51235975 -0.64858746 238.26054589 
    6141 0.54380787 -0.82049842 -0.17622553 179.89793410 
    6142 Axis -0.11225281 -0.83858831 0.53307500 
    6143 Axis point 2.80167010 0.00000000 210.18410599 
    6144 Rotation angle (degrees) 130.02791635 
    6145 Shift along axis -123.43929328 
    6146  
    6147 Average map value = 0.5049 for 10778 atoms, 7587 outside contour 
    6148 
    6149 > fitmap #13 inMap #10 resolution 15
    6150 
    6151 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6152 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6153 correlation = 0.447, correlation about mean = 0.1913, overlap = 201.8 
    6154 steps = 64, shift = 9.36, angle = 0.0393 degrees 
    6155  
    6156 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6157 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6158 Matrix rotation and translation 
    6159 -0.62290526 -0.25360586 -0.74004938 173.95978287 
    6160 0.56268264 0.51196717 -0.64905921 238.26845559 
    6161 0.54348622 -0.82071538 -0.17620749 179.87742694 
    6162 Axis -0.11213715 -0.83849024 0.53325357 
    6163 Axis point 2.82770073 0.00000000 210.16977407 
    6164 Rotation angle (degrees) 130.05875186 
    6165 Shift along axis -123.37284887 
    6166  
    6167 Average map value = 0.5049 for 10778 atoms, 7595 outside contour 
    6168 
    6169 > fitmap #13 inMap #10 resolution 15
    6170 
    6171 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6172 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6173 correlation = 0.447, correlation about mean = 0.1915, overlap = 201.8 
    6174 steps = 52, shift = 2.95, angle = 0.0495 degrees 
    6175  
    6176 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6177 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6178 Matrix rotation and translation 
    6179 -0.62235300 -0.25345816 -0.74056443 174.05111067 
    6180 0.56291818 0.51247156 -0.64845665 238.25880087 
    6181 0.54387485 -0.82044617 -0.17626207 179.90291074 
    6182 Axis -0.11229315 -0.83861930 0.53301775 
    6183 Axis point 2.79430728 0.00000000 210.18272248 
    6184 Rotation angle (degrees) 130.02125515 
    6185 Shift along axis -123.46172940 
    6186  
    6187 Average map value = 0.5049 for 10778 atoms, 7586 outside contour 
    6188 
    6189 > fitmap #13 inMap #10 resolution 15
    6190 
    6191 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6192 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6193 correlation = 0.4416, correlation about mean = 0.1808, overlap = 195.9 
    6194 steps = 40, shift = 0.0101, angle = 0.0592 degrees 
    6195  
    6196 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6197 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6198 Matrix rotation and translation 
    6199 -0.29717185 -0.18714174 -0.93630488 186.93443380 
    6200 0.83083180 0.43256329 -0.35015355 239.80392939 
    6201 0.47053951 -0.88196769 0.02693762 181.20371460 
    6202 Axis -0.29282915 -0.77464102 0.56051975 
    6203 Axis point -58.88291155 -0.00000000 237.77713611 
    6204 Rotation angle (degrees) 114.76108700 
    6205 Shift along axis -138.93355070 
    6206  
    6207 Average map value = 0.4817 for 10778 atoms, 7750 outside contour 
    6208 
    6209 > select down
    6210 
    6211 Nothing selected 
    6212 
    6213 > fitmap #13 inMap #10 resolution 15
    6214 
    6215 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6216 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6217 correlation = 0.4342, correlation about mean = 0.1884, overlap = 195.7 
    6218 steps = 28, shift = 0.0441, angle = 0.0904 degrees 
    6219  
    6220 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6221 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6222 Matrix rotation and translation 
    6223 0.29840845 -0.70750554 0.64061554 150.86584207 
    6224 -0.79637225 -0.55451807 -0.24145588 154.46433817 
    6225 0.52606429 -0.43811605 -0.72891067 207.01290761 
    6226 Axis -0.80491355 0.46884863 -0.36372400 
    6227 Axis point 0.00000000 127.33273152 61.31734174 
    6228 Rotation angle (degrees) 172.98308879 
    6229 Shift along axis -124.30912950 
    6230  
    6231 Average map value = 0.5018 for 10778 atoms, 7973 outside contour 
    6232 
    6233 > fitmap #13 inMap #10 resolution 15
    6234 
    6235 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6236 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6237 correlation = 0.4342, correlation about mean = 0.1885, overlap = 195.7 
    6238 steps = 28, shift = 0.064, angle = 0.0347 degrees 
    6239  
    6240 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6241 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6242 Matrix rotation and translation 
    6243 0.29825848 -0.70717068 0.64105497 150.81362734 
    6244 -0.79621749 -0.55472608 -0.24148848 154.48064558 
    6245 0.52638351 -0.43839327 -0.72851343 207.03346077 
    6246 Axis -0.80486463 0.46872908 -0.36398622 
    6247 Axis point 0.00000000 127.32484139 61.30116435 
    6248 Rotation angle (degrees) 172.97388785 
    6249 Shift along axis -124.33231046 
    6250  
    6251 Average map value = 0.502 for 10778 atoms, 7977 outside contour 
    6252 
    6253 > fitmap #13 inMap #10 resolution 15
    6254 
    6255 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6256 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6257 correlation = 0.4342, correlation about mean = 0.1884, overlap = 195.7 
    6258 steps = 68, shift = 7.04, angle = 0.0143 degrees 
    6259  
    6260 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6261 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6262 Matrix rotation and translation 
    6263 0.29824660 -0.70732903 0.64088576 150.84472432 
    6264 -0.79630626 -0.55458874 -0.24151118 154.47053545 
    6265 0.52625593 -0.43831154 -0.72865476 207.01355670 
    6266 Axis -0.80486180 0.46880592 -0.36389352 
    6267 Axis point 0.00000000 127.33274754 61.29720745 
    6268 Rotation angle (degrees) 172.97760815 
    6269 Shift along axis -124.32334733 
    6270  
    6271 Average map value = 0.5019 for 10778 atoms, 7976 outside contour 
    6272 
    6273 > fitmap #13 inMap #10 resolution 15
    6274 
    6275 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6276 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6277 correlation = 0.4342, correlation about mean = 0.1884, overlap = 195.7 
    6278 steps = 40, shift = 0.0344, angle = 0.0321 degrees 
    6279  
    6280 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6281 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6282 Matrix rotation and translation 
    6283 0.29806463 -0.70702909 0.64130125 150.81313234 
    6284 -0.79619928 -0.55473375 -0.24153087 154.47477783 
    6285 0.52652083 -0.43861187 -0.72828258 207.01457000 
    6286 Axis -0.80480258 0.46871885 -0.36413658 
    6287 Axis point 0.00000000 127.32901348 61.26647565 
    6288 Rotation angle (degrees) 172.96702319 
    6289 Shift along axis -124.35113453 
    6290  
    6291 Average map value = 0.5019 for 10778 atoms, 7977 outside contour 
    6292 
    6293 > fitmap #13 inMap #10 resolution 15
    6294 
    6295 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6296 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6297 correlation = 0.4341, correlation about mean = 0.1884, overlap = 195.7 
    6298 steps = 28, shift = 0.0269, angle = 0.0568 degrees 
    6299  
    6300 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6301 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6302 Matrix rotation and translation 
    6303 0.29750118 -0.70663124 0.64200101 150.77777432 
    6304 -0.79614882 -0.55474881 -0.24166257 154.48225702 
    6305 0.52691565 -0.43923353 -0.72762207 206.99216964 
    6306 Axis -0.80462237 0.46869366 -0.36456701 
    6307 Axis point 0.00000000 127.34491532 61.19066850 
    6308 Rotation angle (degrees) 172.94786311 
    6309 Shift along axis -124.37683178 
    6310  
    6311 Average map value = 0.5019 for 10778 atoms, 7977 outside contour 
    6312 
    6313 > fitmap #13 inMap #10 resolution 15
    6314 
    6315 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6316 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6317 correlation = 0.4043, correlation about mean = 0.1089, overlap = 172.6 
    6318 steps = 44, shift = 0.0261, angle = 0.078 degrees 
    6319  
    6320 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6321 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6322 Matrix rotation and translation 
    6323 0.68750804 -0.67334361 0.27192093 177.97261516 
    6324 -0.72471790 -0.61248400 0.31566961 137.77724738 
    6325 -0.04600685 -0.41409143 -0.90907189 191.50087286 
    6326 Axis -0.91487222 0.39857334 -0.06440589 
    6327 Axis point 0.00000000 128.55010263 68.37097667 
    6328 Rotation angle (degrees) 156.49480508 
    6329 Shift along axis -120.24164701 
    6330  
    6331 Average map value = 0.4311 for 10778 atoms, 7726 outside contour 
    6332 
    6333 > fitmap #13 inMap #10 resolution 15
    6334 
    6335 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6336 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6337 correlation = 0.4012, correlation about mean = 0.1457, overlap = 162.9 
    6338 steps = 64, shift = 0.00247, angle = 0.00212 degrees 
    6339  
    6340 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6341 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6342 Matrix rotation and translation 
    6343 0.53897189 0.48176411 -0.69095046 228.19835799 
    6344 0.77379651 0.04089931 0.63211247 225.45181486 
    6345 0.33278855 -0.87534595 -0.35074388 172.93272974 
    6346 Axis -0.81684305 -0.55473112 0.15824293 
    6347 Axis point 0.00000000 124.06911388 80.90835541 
    6348 Rotation angle (degrees) 112.67083127 
    6349 Shift along axis -284.10199704 
    6350  
    6351 Average map value = 0.4097 for 10778 atoms, 8248 outside contour 
    6352 
    6353 > select down
    6354 
    6355 189 atoms, 203 bonds, 6 residues, 1 model selected 
    6356 
    6357 > select down
    6358 
    6359 189 atoms, 203 bonds, 6 residues, 1 model selected 
    6360 
    6361 > fitmap #13 inMap #10 resolution 15
    6362 
    6363 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6364 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6365 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6366 steps = 48, shift = 0.00725, angle = 0.0214 degrees 
    6367  
    6368 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6369 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6370 Matrix rotation and translation 
    6371 0.99568020 0.08727749 -0.03167713 228.14117241 
    6372 0.08781959 -0.77449481 0.62645463 155.40392159 
    6373 0.03014169 -0.62653039 -0.77881393 174.29176443 
    6374 Axis -0.99878504 -0.04927729 0.00043212 
    6375 Axis point 0.00000000 102.85920160 61.81033803 
    6376 Rotation angle (degrees) 141.15213895 
    6377 Shift along axis -235.44655991 
    6378  
    6379 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    6380 
    6381 > fitmap #13 inMap #10 resolution 15
    6382 
    6383 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6384 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6385 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    6386 steps = 56, shift = 6.3, angle = 0.0145 degrees 
    6387  
    6388 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6389 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6390 Matrix rotation and translation 
    6391 0.99567800 0.08721753 -0.03191067 228.09264202 
    6392 0.08792143 -0.77453242 0.62639385 155.40201854 
    6393 0.02991675 -0.62649225 -0.77885329 174.32629758 
    6394 Axis -0.99878445 -0.04928801 0.00056114 
    6395 Axis point 0.00000000 102.86659169 61.84504136 
    6396 Rotation angle (degrees) 141.15575448 
    6397 Shift along axis -235.37701860 
    6398  
    6399 Average map value = 0.5298 for 10778 atoms, 7664 outside contour 
    6400 
    6401 > fitmap #13 inMap #10 resolution 15
    6402 
    6403 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6404 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6405 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6406 steps = 40, shift = 0.0464, angle = 0.0059 degrees 
    6407  
    6408 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6409 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6410 Matrix rotation and translation 
    6411 0.99568102 0.08720316 -0.03185578 228.12671440 
    6412 0.08787328 -0.77448261 0.62646218 155.40649783 
    6413 0.02995781 -0.62655582 -0.77880057 174.29458546 
    6414 Axis -0.99878526 -0.04927184 0.00053416 
    6415 Axis point 0.00000000 102.86723077 61.82158502 
    6416 Rotation angle (degrees) 141.15093455 
    6417 Shift along axis -235.41366465 
    6418  
    6419 Average map value = 0.5299 for 10778 atoms, 7670 outside contour 
    6420 
    6421 > fitmap #13 inMap #10 resolution 15
    6422 
    6423 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6424 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6425 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    6426 steps = 44, shift = 0.0439, angle = 0.0254 degrees 
    6427  
    6428 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6429 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6430 Matrix rotation and translation 
    6431 0.99567565 0.08713942 -0.03219613 228.08801929 
    6432 0.08802866 -0.77429430 0.62667311 155.42275549 
    6433 0.02967873 -0.62679739 -0.77861686 174.29188075 
    6434 Axis -0.99878363 -0.04930279 0.00070856 
    6435 Axis point 0.00000000 102.89393160 61.82612736 
    6436 Rotation angle (degrees) 141.13419185 
    6437 Shift along axis -235.34985948 
    6438  
    6439 Average map value = 0.5299 for 10778 atoms, 7661 outside contour 
    6440 
    6441 > fitmap #13 inMap #10 resolution 15
    6442 
    6443 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6444 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6445 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6446 steps = 48, shift = 0.0492, angle = 0.0309 degrees 
    6447  
    6448 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6449 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6450 Matrix rotation and translation 
    6451 0.99567737 0.08726927 -0.03178863 228.13300903 
    6452 0.08788426 -0.77451455 0.62642116 155.40505845 
    6453 0.03004664 -0.62650714 -0.77883631 174.29715352 
    6454 Axis -0.99878426 -0.04929260 0.00049025 
    6455 Axis point 0.00000000 102.85985053 61.82139502 
    6456 Rotation angle (degrees) 141.15419175 
    6457 Shift along axis -235.43052892 
    6458  
    6459 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    6460 
    6461 > fitmap #13 inMap #10 resolution 15
    6462 
    6463 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6464 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6465 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6466 steps = 44, shift = 0.0164, angle = 0.0228 degrees 
    6467  
    6468 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6469 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6470 Matrix rotation and translation 
    6471 0.99565016 0.08747680 -0.03206930 228.14896440 
    6472 0.08822742 -0.77460388 0.62626244 155.42202136 
    6473 0.02994251 -0.62636773 -0.77895244 174.28850132 
    6474 Axis -0.99877668 -0.04944472 0.00059850 
    6475 Axis point 0.00000000 102.84462260 61.84025145 
    6476 Rotation angle (degrees) 141.16482033 
    6477 Shift along axis -235.45035148 
    6478  
    6479 Average map value = 0.5299 for 10778 atoms, 7669 outside contour 
    6480 
    6481 > fitmap #13 inMap #10 resolution 15
    6482 
    6483 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6484 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6485 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6486 steps = 44, shift = 0.0168, angle = 0.0368 degrees 
    6487  
    6488 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6489 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6490 Matrix rotation and translation 
    6491 0.99569224 0.08720674 -0.03149321 228.14372126 
    6492 0.08765390 -0.77460585 0.62634054 155.39320054 
    6493 0.03022637 -0.62640296 -0.77891315 174.29920793 
    6494 Axis -0.99878850 -0.04920784 0.00035651 
    6495 Axis point 0.00000000 102.85203996 61.81095849 
    6496 Rotation angle (degrees) 141.16119327 
    6497 Shift along axis -235.45174889 
    6498  
    6499 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    6500 
    6501 > fitmap #13 inMap #10 resolution 15
    6502 
    6503 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6504 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6505 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    6506 steps = 40, shift = 0.0167, angle = 0.0199 degrees 
    6507  
    6508 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6509 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6510 Matrix rotation and translation 
    6511 0.99568757 0.08717090 -0.03173902 228.13679041 
    6512 0.08777266 -0.77444247 0.62652591 155.39266057 
    6513 0.03003486 -0.62660993 -0.77875407 174.29726016 
    6514 Axis -0.99878707 -0.04923565 0.00047962 
    6515 Axis point 0.00000000 102.86600534 61.81479379 
    6516 Rotation angle (degrees) 141.14667829 
    6517 Shift along axis -235.42733887 
    6518  
    6519 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    6520 
    6521 > fitmap #13 inMap #10 resolution 15
    6522 
    6523 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6524 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6525 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6526 steps = 48, shift = 0.0183, angle = 0.0135 degrees 
    6527  
    6528 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6529 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6530 Matrix rotation and translation 
    6531 0.99567902 0.08723987 -0.03181754 228.12883532 
    6532 0.08788190 -0.77456536 0.62635867 155.40641125 
    6533 0.02999876 -0.62644841 -0.77888539 174.29762681 
    6534 Axis -0.99878476 -0.04928227 0.00051184 
    6535 Axis point 0.00000000 102.85893230 61.82652974 
    6536 Rotation angle (degrees) 141.15867904 
    6537 Shift along axis -235.42117214 
    6538  
    6539 Average map value = 0.5299 for 10778 atoms, 7668 outside contour 
    6540 
    6541 > fitmap #13 inMap #10 resolution 15
    6542 
    6543 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6544 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6545 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    6546 steps = 44, shift = 0.0432, angle = 0.0301 degrees 
    6547  
    6548 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6549 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6550 Matrix rotation and translation 
    6551 0.99569029 0.08705989 -0.03195757 228.09416876 
    6552 0.08781532 -0.77427322 0.62672910 155.39877354 
    6553 0.02981916 -0.62683448 -0.77858162 174.30394420 
    6554 Axis -0.99878772 -0.04922114 0.00060189 
    6555 Axis point 0.00000000 102.89148341 61.81874126 
    6556 Rotation angle (degrees) 141.13095227 
    6557 Shift along axis -235.36164820 
    6558  
    6559 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    6560 
    6561 > fitmap #13 inMap #10 resolution 15
    6562 
    6563 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6564 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6565 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6566 steps = 56, shift = 1.16, angle = 0.0277 degrees 
    6567  
    6568 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6569 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6570 Matrix rotation and translation 
    6571 0.99571741 0.08688103 -0.03159747 228.11325560 
    6572 0.08745836 -0.77447272 0.62653248 155.39820312 
    6573 0.02996249 -0.62661280 -0.77875455 174.28946123 
    6574 Axis -0.99879547 -0.04906519 0.00046015 
    6575 Axis point 0.00000000 102.88638584 61.80045796 
    6576 Rotation angle (degrees) 141.14671879 
    6577 Shift along axis -235.38293001 
    6578  
    6579 Average map value = 0.5299 for 10778 atoms, 7665 outside contour 
    6580 
    6581 > fitmap #13 inMap #10 resolution 15
    6582 
    6583 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6584 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6585 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    6586 steps = 60, shift = 0.0178, angle = 0.0187 degrees 
    6587  
    6588 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6589 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6590 Matrix rotation and translation 
    6591 0.99568906 0.08719584 -0.03162363 228.14070650 
    6592 0.08772223 -0.77449801 0.62646432 155.39911872 
    6593 0.03013273 -0.62653780 -0.77880832 174.29537732 
    6594 Axis -0.99878753 -0.04922695 0.00041959 
    6595 Axis point 0.00000000 102.86305598 61.80911780 
    6596 Rotation angle (degrees) 141.15162431 
    6597 Shift along axis -235.44078499 
    6598  
    6599 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    6600 
    6601 > fitmap #13 inMap #10 resolution 15
    6602 
    6603 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    6604 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    6605 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    6606 steps = 44, shift = 0.0497, angle = 0.0325 degrees 
    6607  
    6608 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    6609 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6610 Matrix rotation and translation 
    6611 0.99569249 0.08703903 -0.03194580 228.09785090 
    6612 0.08778888 -0.77421602 0.62680346 155.40089091 
    6613 0.02982349 -0.62690803 -0.77852224 174.29762679 
    6614 Axis -0.99878830 -0.04920945 0.00059738 
    6615 Axis point 0.00000000 102.89711569 61.81041696 
    6616 Rotation angle (degrees) 141.12553003 
    6617 Shift along axis -235.36453499 
    6618  
    6619 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    6620 
    6621 > fitmap #13 inMap #10
    6622 
    6623 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6624 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6625 average map value = 0.5316, steps = 52 
    6626 shifted from previous position = 0.296 
    6627 rotated from previous position = 1.96 degrees 
    6628 atoms outside contour = 7722, contour level = 0.41421 
    6629  
    6630 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6631 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6632 Matrix rotation and translation 
    6633 0.99806737 0.05324783 -0.03203243 226.94871535 
    6634 0.06159132 -0.77932345 0.62358750 154.52170590 
    6635 0.00824114 -0.62435530 -0.78109701 173.54844723 
    6636 Axis -0.99945735 -0.03225445 0.00668217 
    6637 Axis point 0.00000000 104.30032378 61.74241366 
    6638 Rotation angle (degrees) 141.36842576 
    6639 Shift along axis -230.64989548 
    6640  
    6641 
    6642 > fitmap #13 inMap #10
    6643 
    6644 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6645 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6646 average map value = 0.5316, steps = 48 
    6647 shifted from previous position = 0.0167 
    6648 rotated from previous position = 0.0219 degrees 
    6649 atoms outside contour = 7720, contour level = 0.41421 
    6650  
    6651 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6652 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6653 Matrix rotation and translation 
    6654 0.99808726 0.05306853 -0.03170835 226.93553594 
    6655 0.06124818 -0.77928625 0.62366778 154.49928987 
    6656 0.00838733 -0.62441699 -0.78104614 173.55867098 
    6657 Axis -0.99946292 -0.03210851 0.00655024 
    6658 Axis point 0.00000000 104.30644125 61.72703046 
    6659 Rotation angle (degrees) 141.36347151 
    6660 Shift along axis -230.63754449 
    6661  
    6662 
    6663 > fitmap #13 inMap #10
    6664 
    6665 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6666 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6667 average map value = 0.5316, steps = 60 
    6668 shifted from previous position = 0.00923 
    6669 rotated from previous position = 0.00885 degrees 
    6670 atoms outside contour = 7721, contour level = 0.41421 
    6671  
    6672 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6673 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6674 Matrix rotation and translation 
    6675 0.99808300 0.05313464 -0.03173172 226.93317623 
    6676 0.06131326 -0.77919678 0.62377317 154.51037923 
    6677 0.00841878 -0.62452301 -0.78096103 173.55229712 
    6678 Axis -0.99946170 -0.03214693 0.00654830 
    6679 Axis point 0.00000000 104.31320887 61.71758150 
    6680 Rotation angle (degrees) 141.35565738 
    6681 Shift along axis -230.64158138 
    6682  
    6683 
    6684 > fitmap #13 inMap #10
    6685 
    6686 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6687 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6688 average map value = 0.5316, steps = 76 
    6689 shifted from previous position = 0.0516 
    6690 rotated from previous position = 0.00515 degrees 
    6691 atoms outside contour = 7721, contour level = 0.41421 
    6692  
    6693 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6694 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6695 Matrix rotation and translation 
    6696 0.99808832 0.05306480 -0.03168120 226.88496719 
    6697 0.06122694 -0.77918565 0.62379555 154.49675509 
    6698 0.00841613 -0.62454284 -0.78094520 173.57341454 
    6699 Axis -0.99946319 -0.03210331 0.00653490 
    6700 Axis point 0.00000000 104.31645553 61.72575856 
    6701 Rotation angle (degrees) 141.35417647 
    6702 Shift along axis -230.58874631 
    6703  
    6704 
    6705 > fitmap #13 inMap #10
    6706 
    6707 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6708 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6709 average map value = 0.5316, steps = 64 
    6710 shifted from previous position = 0.0563 
    6711 rotated from previous position = 0.0273 degrees 
    6712 atoms outside contour = 7720, contour level = 0.41421 
    6713  
    6714 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6715 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6716 Matrix rotation and translation 
    6717 0.99807654 0.05344254 -0.03141648 226.94367435 
    6718 0.06135555 -0.77910298 0.62388617 154.51097583 
    6719 0.00886547 -0.62461376 -0.78088350 173.55561773 
    6720 Axis -0.99945986 -0.03224685 0.00633459 
    6721 Axis point 0.00000000 104.30053917 61.69380580 
    6722 Rotation angle (degrees) 141.34809500 
    6723 Shift along axis -230.70418215 
    6724  
    6725 
    6726 > fitmap #13 inMap #10
    6727 
    6728 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6729 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6730 average map value = 0.5316, steps = 60 
    6731 shifted from previous position = 0.0154 
    6732 rotated from previous position = 0.0271 degrees 
    6733 atoms outside contour = 7720, contour level = 0.41421 
    6734  
    6735 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6736 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6737 Matrix rotation and translation 
    6738 0.99808865 0.05307216 -0.03165858 226.91972142 
    6739 0.06121895 -0.77921395 0.62376098 154.50435125 
    6740 0.00843561 -0.62450690 -0.78097373 173.55539556 
    6741 Axis -0.99946329 -0.03210262 0.00652297 
    6742 Axis point 0.00000000 104.31394495 61.71622896 
    6743 Rotation angle (degrees) 141.35676901 
    6744 Shift along axis -230.62583045 
    6745  
    6746 
    6747 > fitmap #13 inMap #10
    6748 
    6749 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6750 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6751 average map value = 0.5316, steps = 64 
    6752 shifted from previous position = 0.0114 
    6753 rotated from previous position = 0.00578 degrees 
    6754 atoms outside contour = 7721, contour level = 0.41421 
    6755  
    6756 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6757 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6758 Matrix rotation and translation 
    6759 0.99808393 0.05311066 -0.03174262 226.93122126 
    6760 0.06130183 -0.77923467 0.62372695 154.51154886 
    6761 0.00839168 -0.62447778 -0.78099749 173.55154243 
    6762 Axis -0.99946197 -0.03213632 0.00655883 
    6763 Axis point 0.00000000 104.31241997 61.72016523 
    6764 Rotation angle (degrees) 141.35902586 
    6765 Shift along axis -230.63626262 
    6766  
    6767 
    6768 > fitmap #13 inMap #10
    6769 
    6770 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6771 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6772 average map value = 0.5316, steps = 48 
    6773 shifted from previous position = 0.0175 
    6774 rotated from previous position = 0.0252 degrees 
    6775 atoms outside contour = 7719, contour level = 0.41421 
    6776  
    6777 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6778 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6779 Matrix rotation and translation 
    6780 0.99808915 0.05315118 -0.03151002 226.91461525 
    6781 0.06118503 -0.77900850 0.62402087 154.51778068 
    6782 0.00862095 -0.62475644 -0.78077210 173.53818498 
    6783 Axis -0.99946337 -0.03211896 0.00642992 
    6784 Axis point 0.00000000 104.32815874 61.68194849 
    6785 Rotation angle (degrees) 141.33807470 
    6786 Shift along axis -230.63996028 
    6787  
    6788 
    6789 > fitmap #13 inMap #10
    6790 
    6791 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6792 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6793 average map value = 0.5316, steps = 48 
    6794 shifted from previous position = 0.0172 
    6795 rotated from previous position = 0.0261 degrees 
    6796 atoms outside contour = 7721, contour level = 0.41421 
    6797  
    6798 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6799 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6800 Matrix rotation and translation 
    6801 0.99808505 0.05309642 -0.03173143 226.93094153 
    6802 0.06128392 -0.77925013 0.62370940 154.51181737 
    6803 0.00839009 -0.62445970 -0.78101197 173.55136468 
    6804 Axis -0.99946229 -0.03212701 0.00655608 
    6805 Axis point 0.00000000 104.31232766 61.72029435 
    6806 Rotation angle (degrees) 141.36034809 
    6807 Shift along axis -230.63510523 
    6808  
    6809 
    6810 > color zone #10 near #13 distance 17.8
    6811 
    6812 [Repeated 1 time(s)]
    6813 
    6814 > undo
    6815 
    6816 [Repeated 1 time(s)]
    6817 
    6818 > select #13:63-68
    6819 
    6820 189 atoms, 203 bonds, 6 residues, 1 model selected 
    6821 
    6822 > color zone #10 near sel & #13 distance 17.8
    6823 
    6824 [Repeated 1 time(s)]
    6825 
    6826 > undo
    6827 
    6828 [Repeated 1 time(s)]
    6829 
    6830 > select add #13
    6831 
    6832 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    6833 
    6834 > select subtract #13
    6835 
    6836 Nothing selected 
    6837 
    6838 > scalebar off
    6839 
    6840 > scalebar 50
    6841 
    6842 > select #13:63-68
    6843 
    6844 189 atoms, 203 bonds, 6 residues, 1 model selected 
    6845 
    6846 > color sel magenta
    6847 
    6848 > color sel lime
    6849 
    6850 > select add #13
    6851 
    6852 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    6853 
    6854 > ui mousemode right "translate selected models"
    6855 
    6856 > view matrix models
    6857 > #13,0.59289,-0.80001,0.091995,343.21,-0.80152,-0.57522,0.16334,117.13,-0.077759,-0.17058,-0.98227,-14.948
    6858 
    6859 > fitmap #13 inMap #10
    6860 
    6861 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6862 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6863 average map value = 0.5316, steps = 72 
    6864 shifted from previous position = 3.17 
    6865 rotated from previous position = 0.0302 degrees 
    6866 atoms outside contour = 7719, contour level = 0.41421 
    6867  
    6868 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6869 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6870 Matrix rotation and translation 
    6871 0.99808640 0.05321000 -0.03149762 226.92630976 
    6872 0.06122266 -0.77896694 0.62406906 154.50503271 
    6873 0.00867119 -0.62480326 -0.78073408 173.54479902 
    6874 Axis -0.99946259 -0.03214678 0.00641247 
    6875 Axis point 0.00000000 104.32195928 61.68421729 
    6876 Rotation angle (degrees) 141.33455115 
    6877 Shift along axis -230.65834560 
    6878  
    6879 
    6880 > fitmap #13 inMap #10
    6881 
    6882 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6883 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6884 average map value = 0.5316, steps = 44 
    6885 shifted from previous position = 0.0436 
    6886 rotated from previous position = 0.00444 degrees 
    6887 atoms outside contour = 7719, contour level = 0.41421 
    6888  
    6889 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6890 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6891 Matrix rotation and translation 
    6892 0.99809050 0.05313990 -0.03148622 226.88633216 
    6893 0.06116108 -0.77898953 0.62404690 154.49229013 
    6894 0.00863443 -0.62478106 -0.78075225 173.56449596 
    6895 Axis -0.99946374 -0.03210942 0.00641952 
    6896 Axis point 0.00000000 104.32268613 61.69643727 
    6897 Rotation angle (degrees) 141.33623264 
    6898 Shift along axis -230.61112047 
    6899  
    6900 
    6901 > fitmap #13 inMap #10
    6902 
    6903 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6904 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6905 average map value = 0.5316, steps = 64 
    6906 shifted from previous position = 0.0553 
    6907 rotated from previous position = 0.0335 degrees 
    6908 atoms outside contour = 7721, contour level = 0.41421 
    6909  
    6910 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6911 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6912 Matrix rotation and translation 
    6913 0.99807685 0.05317531 -0.03185676 226.93755727 
    6914 0.06142399 -0.77925658 0.62368756 154.51690303 
    6915 0.00834026 -0.62444493 -0.78102430 173.55069087 
    6916 Axis -0.99945999 -0.03218834 0.00660525 
    6917 Axis point 0.00000000 104.30867983 61.72802546 
    6918 Rotation angle (degrees) 141.36158598 
    6919 Shift along axis -230.64230811 
    6920  
    6921 
    6922 > fitmap #13 inMap #10
    6923 
    6924 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6925 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6926 average map value = 0.5316, steps = 60 
    6927 shifted from previous position = 0.0496 
    6928 rotated from previous position = 0.0301 degrees 
    6929 atoms outside contour = 7721, contour level = 0.41421 
    6930  
    6931 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6932 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6933 Matrix rotation and translation 
    6934 0.99808744 0.05316542 -0.03153990 226.89246293 
    6935 0.06121479 -0.77900544 0.62402178 154.49575524 
    6936 0.00860670 -0.62475905 -0.78077016 173.56227346 
    6937 Axis -0.99946289 -0.03213137 0.00644232 
    6938 Axis point 0.00000000 104.32093952 61.69944402 
    6939 Rotation angle (degrees) 141.33792352 
    6940 Shift along axis -230.61661306 
    6941  
    6942 
    6943 > fitmap #13 inMap #10
    6944 
    6945 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6946 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6947 average map value = 0.5316, steps = 64 
    6948 shifted from previous position = 0.0486 
    6949 rotated from previous position = 0.028 degrees 
    6950 atoms outside contour = 7721, contour level = 0.41421 
    6951  
    6952 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6953 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6954 Matrix rotation and translation 
    6955 0.99808029 0.05314178 -0.03180494 226.93588399 
    6956 0.06136536 -0.77925367 0.62369697 154.51314731 
    6957 0.00836033 -0.62445142 -0.78101890 173.55157324 
    6958 Axis -0.99946096 -0.03216254 0.00658507 
    6959 Axis point 0.00000000 104.30953183 61.72540869 
    6960 Rotation angle (degrees) 141.36104660 
    6961 Shift along axis -230.64024202 
    6962  
    6963 
    6964 > fitmap #13 inMap #10
    6965 
    6966 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6967 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6968 average map value = 0.5316, steps = 76 
    6969 shifted from previous position = 0.0503 
    6970 rotated from previous position = 0.0305 degrees 
    6971 atoms outside contour = 7721, contour level = 0.41421 
    6972  
    6973 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6974 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6975 Matrix rotation and translation 
    6976 0.99809101 0.05312687 -0.03149183 226.88953205 
    6977 0.06115450 -0.77899669 0.62403861 154.49300128 
    6978 0.00862126 -0.62477324 -0.78075865 173.56306328 
    6979 Axis -0.99946389 -0.03210379 0.00642477 
    6980 Axis point 0.00000000 104.32307462 61.69641828 
    6981 Rotation angle (degrees) 141.33683094 
    6982 Shift along axis -230.61260269 
    6983  
    6984 
    6985 > fitmap #13 inMap #10
    6986 
    6987 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    6988 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    6989 average map value = 0.5316, steps = 60 
    6990 shifted from previous position = 0.0394 
    6991 rotated from previous position = 0.0264 degrees 
    6992 atoms outside contour = 7721, contour level = 0.41421 
    6993  
    6994 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    6995 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    6996 Matrix rotation and translation 
    6997 0.99808354 0.05312064 -0.03173829 226.92534075 
    6998 0.06130690 -0.77923239 0.62372931 154.50731802 
    6999 0.00840148 -0.62447978 -0.78099579 173.55527718 
    7000 Axis -0.99946186 -0.03214058 0.00655487 
    7001 Axis point 0.00000000 104.31054931 61.72232958 
    7002 Rotation angle (degrees) 141.35886084 
    7003 Shift along axis -230.63154567 
    7004  
    7005 
    7006 > fitmap #13 inMap #10
    7007 
    7008 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7009 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7010 average map value = 0.5316, steps = 84 
    7011 shifted from previous position = 0.0102 
    7012 rotated from previous position = 0.00723 degrees 
    7013 atoms outside contour = 7721, contour level = 0.41421 
    7014  
    7015 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7016 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7017 Matrix rotation and translation 
    7018 0.99808982 0.05306172 -0.03163909 226.93082308 
    7019 0.06119851 -0.77920656 0.62377221 154.50797478 
    7020 0.00844512 -0.62451701 -0.78096555 173.55034087 
    7021 Axis -0.99946362 -0.03209409 0.00651486 
    7022 Axis point 0.00000000 104.31599610 61.71135402 
    7023 Rotation angle (degrees) 141.35600056 
    7024 Shift along axis -230.63723932 
    7025  
    7026 
    7027 > fitmap #13 inMap #10
    7028 
    7029 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7030 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7031 average map value = 0.5316, steps = 76 
    7032 shifted from previous position = 0.0477 
    7033 rotated from previous position = 0.00208 degrees 
    7034 atoms outside contour = 7723, contour level = 0.41421 
    7035  
    7036 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7037 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7038 Matrix rotation and translation 
    7039 0.99808932 0.05305075 -0.03167323 226.88948626 
    7040 0.06121131 -0.77920905 0.62376786 154.49632723 
    7041 0.00841136 -0.62451484 -0.78096764 173.57018267 
    7042 Axis -0.99946348 -0.03209456 0.00653392 
    7043 Axis point 0.00000000 104.31478596 61.72527687 
    7044 Rotation angle (degrees) 141.35623358 
    7045 Shift along axis -230.59215433 
    7046  
    7047 
    7048 > fitmap #13 inMap #10
    7049 
    7050 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7051 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7052 average map value = 0.5316, steps = 48 
    7053 shifted from previous position = 0.0569 
    7054 rotated from previous position = 0.0152 degrees 
    7055 atoms outside contour = 7720, contour level = 0.41421 
    7056  
    7057 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7058 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7059 Matrix rotation and translation 
    7060 0.99807681 0.05316606 -0.03187348 226.94398819 
    7061 0.06142749 -0.77927789 0.62366059 154.51896673 
    7062 0.00831935 -0.62441912 -0.78104516 173.54798361 
    7063 Axis -0.99945999 -0.03218635 0.00661574 
    7064 Axis point 0.00000000 104.30812754 61.72886262 
    7065 Rotation angle (degrees) 141.36352257 
    7066 Shift along axis -230.64668938 
    7067  
    7068 
    7069 > fitmap #13 inMap #10
    7070 
    7071 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7072 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7073 average map value = 0.5316, steps = 64 
    7074 shifted from previous position = 0.0617 
    7075 rotated from previous position = 0.0177 degrees 
    7076 atoms outside contour = 7721, contour level = 0.41421 
    7077  
    7078 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7079 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7080 Matrix rotation and translation 
    7081 0.99808837 0.05303843 -0.03172384 226.88517840 
    7082 0.06123238 -0.77913968 0.62385243 154.49643512 
    7083 0.00837093 -0.62460242 -0.78089803 173.56615714 
    7084 Axis -0.99946319 -0.03209827 0.00655975 
    7085 Axis point 0.00000000 104.32025912 61.72169349 
    7086 Rotation angle (degrees) 141.34990245 
    7087 Shift along axis -230.58390320 
    7088  
    7089 
    7090 > fitmap #13 inMap #10
    7091 
    7092 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7093 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7094 average map value = 0.5316, steps = 48 
    7095 shifted from previous position = 0.0207 
    7096 rotated from previous position = 0.0428 degrees 
    7097 atoms outside contour = 7717, contour level = 0.41421 
    7098  
    7099 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7100 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7101 Matrix rotation and translation 
    7102 0.99811102 0.05296546 -0.03112767 226.86166472 
    7103 0.06079913 -0.77888597 0.62421152 154.47535695 
    7104 0.00881682 -0.62492497 -0.78063502 173.56853602 
    7105 Axis -0.99946947 -0.03196072 0.00626795 
    7106 Axis point 0.00000000 104.33538271 61.67017806 
    7107 Rotation angle (degrees) 141.32516870 
    7108 Shift along axis -230.59053325 
    7109  
    7110 
    7111 > fitmap #13 inMap #10
    7112 
    7113 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7114 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7115 average map value = 0.5316, steps = 60 
    7116 shifted from previous position = 0.0608 
    7117 rotated from previous position = 0.0302 degrees 
    7118 atoms outside contour = 7719, contour level = 0.41421 
    7119  
    7120 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7121 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7122 Matrix rotation and translation 
    7123 0.99808628 0.05318974 -0.03153588 226.92568984 
    7124 0.06123144 -0.77901643 0.62400642 154.50389602 
    7125 0.00862384 -0.62474327 -0.78078260 173.54600132 
    7126 Axis -0.99946257 -0.03214267 0.00643634 
    7127 Axis point 0.00000000 104.31917730 61.69077425 
    7128 Rotation angle (degrees) 141.33905169 
    7129 Shift along axis -230.65289855 
    7130  
    7131 
    7132 > fitmap #13 inMap #10
    7133 
    7134 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7135 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7136 average map value = 0.5316, steps = 40 
    7137 shifted from previous position = 0.0443 
    7138 rotated from previous position = 0.0286 degrees 
    7139 atoms outside contour = 7721, contour level = 0.41421 
    7140  
    7141 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7142 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7143 Matrix rotation and translation 
    7144 0.99805638 0.05354024 -0.03188705 226.90177455 
    7145 0.06172408 -0.77895968 0.62402874 154.53809725 
    7146 0.00857200 -0.62478410 -0.78075050 173.54352570 
    7147 Axis -0.99945416 -0.03238033 0.00654971 
    7148 Axis point 0.00000000 104.31637900 61.70374282 
    7149 Rotation angle (degrees) 141.33634809 
    7150 Shift along axis -230.64525586 
    7151  
    7152 
    7153 > fitmap #13 inMap #10
    7154 
    7155 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7156 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7157 average map value = 0.5316, steps = 48 
    7158 shifted from previous position = 0.0413 
    7159 rotated from previous position = 0.0428 degrees 
    7160 atoms outside contour = 7717, contour level = 0.41421 
    7161  
    7162 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7163 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7164 Matrix rotation and translation 
    7165 0.99809880 0.05308036 -0.03132317 226.87534813 
    7166 0.06101127 -0.77889434 0.62418037 154.48593380 
    7167 0.00873436 -0.62490479 -0.78065211 173.56616573 
    7168 Axis -0.99946604 -0.03205237 0.00634599 
    7169 Axis point 0.00000000 104.33141988 61.68098433 
    7170 Rotation angle (degrees) 141.32689577 
    7171 Shift along axis -230.60439739 
    7172  
    7173 
    7174 > fitmap #13 inMap #10
    7175 
    7176 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7177 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7178 average map value = 0.5316, steps = 60 
    7179 shifted from previous position = 0.0562 
    7180 rotated from previous position = 0.0364 degrees 
    7181 atoms outside contour = 7721, contour level = 0.41421 
    7182  
    7183 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7184 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7185 Matrix rotation and translation 
    7186 0.99808535 0.05310926 -0.03170024 226.92664595 
    7187 0.06127377 -0.77919900 0.62377428 154.50991646 
    7188 0.00842747 -0.62452241 -0.78096142 173.55255076 
    7189 Axis -0.99946236 -0.03212869 0.00653701 
    7190 Axis point 0.00000000 104.31470514 61.71573269 
    7191 Rotation angle (degrees) 141.35566922 
    7192 Shift along axis -230.63432816 
    7193  
    7194 
    7195 > fitmap #13 inMap #10
    7196 
    7197 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7198 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7199 average map value = 0.5316, steps = 44 
    7200 shifted from previous position = 0.0474 
    7201 rotated from previous position = 0.0227 degrees 
    7202 atoms outside contour = 7719, contour level = 0.41421 
    7203  
    7204 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7205 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7206 Matrix rotation and translation 
    7207 0.99809195 0.05311815 -0.03147676 226.88487234 
    7208 0.06113833 -0.77900215 0.62403338 154.49142981 
    7209 0.00862711 -0.62476717 -0.78076344 173.56494468 
    7210 Axis -0.99946416 -0.03209670 0.00641887 
    7211 Axis point 0.00000000 104.32288080 61.69695161 
    7212 Rotation angle (degrees) 141.33725771 
    7213 Shift along axis -230.60787172 
    7214  
    7215 
    7216 > fitmap #13 inMap #10
    7217 
    7218 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7219 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7220 average map value = 0.5316, steps = 60 
    7221 shifted from previous position = 0.0448 
    7222 rotated from previous position = 0.0257 degrees 
    7223 atoms outside contour = 7721, contour level = 0.41421 
    7224  
    7225 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7226 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7227 Matrix rotation and translation 
    7228 0.99808447 0.05311075 -0.03172559 226.92530593 
    7229 0.06129117 -0.77922768 0.62373674 154.50762631 
    7230 0.00840574 -0.62448650 -0.78099037 173.55438240 
    7231 Axis -0.99946212 -0.03213347 0.00655013 
    7232 Axis point 0.00000000 104.31158980 61.72064135 
    7233 Rotation angle (degrees) 141.35835346 
    7234 Shift along axis -230.63131130 
    7235  
    7236 
    7237 > select subtract #13
    7238 
    7239 Nothing selected 
    7240 
    7241 > fitmap #13 inMap #10
    7242 
    7243 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7244 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7245 average map value = 0.5316, steps = 116 
    7246 shifted from previous position = 22 
    7247 rotated from previous position = 0.0288 degrees 
    7248 atoms outside contour = 7721, contour level = 0.41421 
    7249  
    7250 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7251 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7252 Matrix rotation and translation 
    7253 0.99809631 0.05301734 -0.03150866 226.88792540 
    7254 0.06107896 -0.77896178 0.62408958 154.49358177 
    7255 0.00854361 -0.62482607 -0.78071723 173.55840474 
    7256 Axis -0.99946537 -0.03205249 0.00645145 
    7257 Axis point 0.00000000 104.33263292 61.69219360 
    7258 Rotation angle (degrees) 141.33308779 
    7259 Shift along axis -230.59882381 
    7260  
    7261 
    7262 > scalebar off
    7263 
    7264 > fitmap #13 inMap #10 resolution 15
    7265 
    7266 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7267 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7268 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7269 steps = 100, shift = 22.3, angle = 1.98 degrees 
    7270  
    7271 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7272 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7273 Matrix rotation and translation 
    7274 0.99567792 0.08725618 -0.03180723 228.14468265 
    7275 0.08788674 -0.77453569 0.62639467 155.41038747 
    7276 0.03002105 -0.62648282 -0.77885686 174.28681527 
    7277 Axis -0.99878443 -0.04928903 0.00050268 
    7278 Axis point 0.00000000 102.85971265 61.81797170 
    7279 Rotation angle (degrees) 141.15607097 
    7280 Shift along axis -235.43977425 
    7281  
    7282 Average map value = 0.5299 for 10778 atoms, 7666 outside contour 
    7283 
    7284 > fitmap #13 inMap #10 resolution 15
    7285 
    7286 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7287 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7288 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7289 steps = 44, shift = 0.0703, angle = 0.0333 degrees 
    7290  
    7291 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7292 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7293 Matrix rotation and translation 
    7294 0.99568965 0.08704447 -0.03201971 228.08662725 
    7295 0.08784019 -0.77422717 0.62678249 155.39974989 
    7296 0.02976750 -0.62689350 -0.77853608 174.30451995 
    7297 Axis -0.99878751 -0.04922507 0.00063394 
    7298 Axis point 0.00000000 102.89670444 61.81962970 
    7299 Rotation angle (degrees) 141.12680101 
    7300 Shift along axis -235.34913963 
    7301  
    7302 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    7303 
    7304 > fitmap #13 inMap #10
    7305 
    7306 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    7307 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    7308 average map value = 0.5316, steps = 52 
    7309 shifted from previous position = 0.302 
    7310 rotated from previous position = 1.97 degrees 
    7311 atoms outside contour = 7720, contour level = 0.41421 
    7312  
    7313 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    7314 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7315 Matrix rotation and translation 
    7316 0.99807268 0.05319649 -0.03195211 226.94508480 
    7317 0.06150089 -0.77931414 0.62360806 154.51912019 
    7318 0.00827311 -0.62437129 -0.78108389 173.54913666 
    7319 Axis -0.99945884 -0.03221483 0.00665067 
    7320 Axis point 0.00000000 104.30348225 61.73711779 
    7321 Rotation angle (degrees) 141.36715248 
    7322 Shift along axis -230.64586126 
    7323  
    7324 
    7325 > fitmap #13 inMap #10 resolution 15
    7326 
    7327 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7328 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7329 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7330 steps = 48, shift = 0.268, angle = 1.96 degrees 
    7331  
    7332 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7333 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7334 Matrix rotation and translation 
    7335 0.99569634 0.08701445 -0.03189281 228.13206906 
    7336 0.08773830 -0.77425793 0.62675877 155.40336946 
    7337 0.02984389 -0.62685967 -0.77856040 174.26938961 
    7338 Axis -0.99878941 -0.04918718 0.00057671 
    7339 Axis point 0.00000000 102.89120185 61.79537233 
    7340 Rotation angle (degrees) 141.12900929 
    7341 Shift along axis -235.39924533 
    7342  
    7343 Average map value = 0.5299 for 10778 atoms, 7669 outside contour 
    7344 
    7345 > fitmap #13 inMap #10 resolution 15
    7346 
    7347 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7348 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7349 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7350 steps = 44, shift = 0.00944, angle = 0.0266 degrees 
    7351  
    7352 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7353 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7354 Matrix rotation and translation 
    7355 0.99567940 0.08725956 -0.03175176 228.13421604 
    7356 0.08785178 -0.77447920 0.62646941 155.40157557 
    7357 0.03007445 -0.62655218 -0.77879900 174.29767095 
    7358 Axis -0.99878481 -0.04928173 0.00047206 
    7359 Axis point 0.00000000 102.86156373 61.81736749 
    7360 Rotation angle (degrees) 141.15078107 
    7361 Shift along axis -235.43316926 
    7362  
    7363 Average map value = 0.5298 for 10778 atoms, 7669 outside contour 
    7364 
    7365 > fitmap #13 inMap #10 resolution 15
    7366 
    7367 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7368 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7369 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7370 steps = 40, shift = 0.0432, angle = 0.0152 degrees 
    7371  
    7372 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7373 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7374 Matrix rotation and translation 
    7375 0.99569495 0.08712394 -0.03163634 228.09408149 
    7376 0.08766797 -0.77437257 0.62662696 155.39487837 
    7377 0.03009598 -0.62670284 -0.77867694 174.31736279 
    7378 Axis -0.99878910 -0.04919500 0.00043354 
    7379 Axis point 0.00000000 102.88042847 61.81221184 
    7380 Rotation angle (degrees) 141.13962748 
    7381 Shift along axis -235.38695975 
    7382  
    7383 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7384 
    7385 > fitmap #13 inMap #10 resolution 15
    7386 
    7387 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7388 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7389 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7390 steps = 48, shift = 0.059, angle = 0.023 degrees 
    7391  
    7392 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7393 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7394 Matrix rotation and translation 
    7395 0.99567978 0.08723181 -0.03181592 228.14368607 
    7396 0.08787476 -0.77456952 0.62635452 155.40867966 
    7397 0.02999447 -0.62644439 -0.77888879 174.28908351 
    7398 Axis -0.99878498 -0.04927789 0.00051259 
    7399 Axis point 0.00000000 102.85845363 61.82211330 
    7400 Rotation angle (degrees) 141.15898972 
    7401 Shift along axis -235.43535860 
    7402  
    7403 Average map value = 0.5299 for 10778 atoms, 7666 outside contour 
    7404 
    7405 > fitmap #13 inMap #10 resolution 15
    7406 
    7407 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7408 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7409 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7410 steps = 136, shift = 28.2, angle = 0.0345 degrees 
    7411  
    7412 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7413 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7414 Matrix rotation and translation 
    7415 0.99569690 0.08698798 -0.03194752 228.09104563 
    7416 0.08775142 -0.77424469 0.62677329 155.39767669 
    7417 0.02978662 -0.62687971 -0.77854646 174.30119267 
    7418 Axis -0.99878956 -0.04918380 0.00060824 
    7419 Axis point 0.00000000 102.89775655 61.81442523 
    7420 Rotation angle (degrees) 141.12774301 
    7421 Shift along axis -235.35198659 
    7422  
    7423 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7424 
    7425 > fitmap #13 inMap #10 resolution 15
    7426 
    7427 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7428 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7429 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7430 steps = 112, shift = 26.9, angle = 0.00495 degrees 
    7431  
    7432 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7433 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7434 Matrix rotation and translation 
    7435 0.99569652 0.08697728 -0.03198861 228.09035645 
    7436 0.08776661 -0.77419596 0.62683136 155.40058435 
    7437 0.02975471 -0.62694137 -0.77849802 174.29785616 
    7438 Axis -0.99878942 -0.04918641 0.00062880 
    7439 Axis point 0.00000000 102.90298413 61.81154199 
    7440 Rotation angle (degrees) 141.12332533 
    7441 Shift along axis -235.34823221 
    7442  
    7443 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7444 
    7445 > fitmap #13 inMap #10 resolution 15
    7446 
    7447 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7448 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7449 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    7450 steps = 60, shift = 4.51, angle = 0.0224 degrees 
    7451  
    7452 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7453 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7454 Matrix rotation and translation 
    7455 0.99572385 0.08675247 -0.03174724 228.06844499 
    7456 0.08743404 -0.77409345 0.62700441 155.38543741 
    7457 0.02981893 -0.62709908 -0.77836854 174.30604087 
    7458 Axis -0.99879703 -0.04903272 0.00054282 
    7459 Axis point 0.00000000 102.92131563 61.79366773 
    7460 Rotation angle (degrees) 141.11149018 
    7461 Shift along axis -235.31843805 
    7462  
    7463 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7464 
    7465 > fitmap #13 inMap #10 resolution 15
    7466 
    7467 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7468 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7469 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    7470 steps = 48, shift = 0.00166, angle = 0.00877 degrees 
    7471  
    7472 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7473 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7474 Matrix rotation and translation 
    7475 0.99571590 0.08678975 -0.03189455 228.07243327 
    7476 0.08755594 -0.77409348 0.62698735 155.38957707 
    7477 0.02972679 -0.62709388 -0.77837625 174.30283884 
    7478 Axis -0.99879479 -0.04907742 0.00061022 
    7479 Axis point 0.00000000 102.91986317 61.80133064 
    7480 Rotation angle (degrees) 141.11220668 
    7481 Shift along axis -235.31731446 
    7482  
    7483 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7484 
    7485 > fitmap #13 inMap #10 resolution 15
    7486 
    7487 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7488 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7489 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7490 steps = 76, shift = 16.1, angle = 0.0494 degrees 
    7491  
    7492 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7493 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7494 Matrix rotation and translation 
    7495 0.99568574 0.08705862 -0.03210265 228.08751154 
    7496 0.08791922 -0.77455971 0.62636042 155.40198882 
    7497 0.02966473 -0.62648062 -0.77887228 174.32005017 
    7498 Axis -0.99878664 -0.04924203 0.00068608 
    7499 Axis point 0.00000000 102.87447395 61.85528470 
    7500 Rotation angle (degrees) 141.15751527 
    7501 Shift along axis -235.34347006 
    7502  
    7503 Average map value = 0.5299 for 10778 atoms, 7662 outside contour 
    7504 
    7505 > fitmap #13 inMap #10 resolution 15
    7506 
    7507 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7508 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7509 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7510 steps = 40, shift = 0.0101, angle = 0.0132 degrees 
    7511  
    7512 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7513 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7514 Matrix rotation and translation 
    7515 0.99568275 0.08715767 -0.03192610 228.09776856 
    7516 0.08788251 -0.77449426 0.62644650 155.40145309 
    7517 0.02987312 -0.62654776 -0.77881031 174.31768838 
    7518 Axis -0.99878576 -0.04926134 0.00057778 
    7519 Axis point 0.00000000 102.87172772 61.83887724 
    7520 Rotation angle (degrees) 141.15183192 
    7521 Shift along axis -235.37536938 
    7522  
    7523 Average map value = 0.5298 for 10778 atoms, 7664 outside contour 
    7524 
    7525 > fitmap #13 inMap #10 resolution 15
    7526 
    7527 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7528 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7529 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7530 steps = 40, shift = 0.0494, angle = 0.00775 degrees 
    7531  
    7532 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7533 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7534 Matrix rotation and translation 
    7535 0.99567425 0.08727703 -0.03186509 228.13621587 
    7536 0.08793677 -0.77447985 0.62645669 155.41371239 
    7537 0.02999649 -0.62654895 -0.77880461 174.28776539 
    7538 Axis -0.99878336 -0.04931048 0.00052589 
    7539 Axis point 0.00000000 102.86437815 61.81792366 
    7540 Rotation angle (degrees) 141.15130215 
    7541 Shift along axis -235.43052519 
    7542  
    7543 Average map value = 0.5299 for 10778 atoms, 7668 outside contour 
    7544 
    7545 > fitmap #13 inMap #10 resolution 15
    7546 
    7547 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7548 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7549 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7550 steps = 44, shift = 0.0219, angle = 0.0248 degrees 
    7551  
    7552 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7553 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7554 Matrix rotation and translation 
    7555 0.99569538 0.08718387 -0.03145709 228.14713972 
    7556 0.08761191 -0.77457740 0.62638159 155.39112151 
    7557 0.03024450 -0.62644132 -0.77888160 174.29619436 
    7558 Axis -0.99878936 -0.04919042 0.00034125 
    7559 Axis point 0.00000000 102.85418903 61.80536695 
    7560 Rotation angle (degrees) 141.15830845 
    7561 Shift along axis -235.45521177 
    7562  
    7563 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    7564 
    7565 > fitmap #13 inMap #10 resolution 15
    7566 
    7567 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7568 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7569 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7570 steps = 40, shift = 0.0725, angle = 0.0388 degrees 
    7571  
    7572 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7573 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7574 Matrix rotation and translation 
    7575 0.99570556 0.08692997 -0.03183530 228.08445301 
    7576 0.08763617 -0.77426038 0.62677002 155.38708493 
    7577 0.02983637 -0.62686836 -0.77855369 174.30764466 
    7578 Axis -0.99879200 -0.04913472 0.00056264 
    7579 Axis point 0.00000000 102.89685119 61.81274159 
    7580 Rotation angle (degrees) 141.12839430 
    7581 Shift along axis -235.34575474 
    7582  
    7583 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    7584 
    7585 > fitmap #13 inMap #10 resolution 15
    7586 
    7587 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7588 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7589 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7590 steps = 48, shift = 0.0351, angle = 0.0328 degrees 
    7591  
    7592 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7593 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7594 Matrix rotation and translation 
    7595 0.99566669 0.08718716 -0.03234352 228.07762567 
    7596 0.08815651 -0.77424709 0.62671347 155.42900415 
    7597 0.02959957 -0.62684906 -0.77857827 174.29382285 
    7598 Axis -0.99878108 -0.04935341 0.00077234 
    7599 Axis point 0.00000000 102.89759679 61.83271318 
    7600 Rotation angle (degrees) 141.13068381 
    7601 Shift along axis -235.33595439 
    7602  
    7603 Average map value = 0.5299 for 10778 atoms, 7665 outside contour 
    7604 
    7605 > fitmap #13 inMap #10 resolution 15
    7606 
    7607 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7608 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7609 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7610 steps = 48, shift = 0.0664, angle = 0.0439 degrees 
    7611  
    7612 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7613 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7614 Matrix rotation and translation 
    7615 0.99567730 0.08727954 -0.03176260 228.13433996 
    7616 0.08787904 -0.77457947 0.62634162 155.40549422 
    7617 0.03006423 -0.62642544 -0.77890134 174.29810343 
    7618 Axis -0.99878429 -0.04929222 0.00047795 
    7619 Axis point 0.00000000 102.85464793 61.82459860 
    7620 Rotation angle (degrees) 141.16013076 
    7621 Shift along axis -235.43396857 
    7622  
    7623 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7624 
    7625 > fitmap #13 inMap #10 resolution 15
    7626 
    7627 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7628 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7629 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7630 steps = 48, shift = 0.0603, angle = 0.0398 degrees 
    7631  
    7632 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7633 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7634 Matrix rotation and translation 
    7635 0.99569764 0.08691786 -0.03211499 228.08063602 
    7636 0.08780399 -0.77428646 0.62671431 155.39943362 
    7637 0.02960655 -0.62683783 -0.77858705 174.30561908 
    7638 Axis -0.99878979 -0.04917772 0.00070604 
    7639 Axis point 0.00000000 102.90123017 61.82963267 
    7640 Rotation angle (degrees) 141.13146936 
    7641 Shift along axis -235.32373438 
    7642  
    7643 Average map value = 0.5299 for 10778 atoms, 7663 outside contour 
    7644 
    7645 > fitmap #13 inMap #10 resolution 15
    7646 
    7647 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7648 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7649 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7650 steps = 44, shift = 0.0622, angle = 0.0381 degrees 
    7651  
    7652 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7653 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7654 Matrix rotation and translation 
    7655 0.99567841 0.08730075 -0.03166954 228.13631073 
    7656 0.08783230 -0.77447999 0.62647118 155.40449034 
    7657 0.03016406 -0.62654548 -0.77880093 174.29448481 
    7658 Axis -0.99878453 -0.04928781 0.00042370 
    7659 Axis point 0.00000000 102.85956689 61.81020253 
    7660 Rotation angle (degrees) 141.15094999 
    7661 Shift along axis -235.44471529 
    7662  
    7663 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7664 
    7665 > fitmap #13 inMap #10 resolution 15
    7666 
    7667 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7668 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7669 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7670 steps = 44, shift = 0.043, angle = 0.0183 degrees 
    7671  
    7672 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7673 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7674 Matrix rotation and translation 
    7675 0.99567344 0.08728456 -0.03186959 228.11017186 
    7676 0.08793759 -0.77431470 0.62666069 155.39856958 
    7677 0.03002079 -0.62675199 -0.77864029 174.31168090 
    7678 Axis -0.99878302 -0.04931740 0.00052037 
    7679 Axis point 0.00000000 102.87351732 61.82137991 
    7680 Rotation angle (degrees) 141.13629390 
    7681 Shift along axis -235.40571463 
    7682  
    7683 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7684 
    7685 > fitmap #13 inMap #10 resolution 15
    7686 
    7687 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7688 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7689 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7690 steps = 44, shift = 0.0177, angle = 0.0235 degrees 
    7691  
    7692 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7693 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7694 Matrix rotation and translation 
    7695 0.99569179 0.08700251 -0.03206704 228.08639299 
    7696 0.08783509 -0.77418287 0.62683792 155.40363547 
    7697 0.02971080 -0.62695403 -0.77848951 174.29815481 
    7698 Axis -0.99878808 -0.04921308 0.00066324 
    7699 Axis point 0.00000000 102.90373901 61.81556274 
    7700 Rotation angle (degrees) 141.12255518 
    7701 Shift along axis -235.34226152 
    7702  
    7703 Average map value = 0.5299 for 10778 atoms, 7662 outside contour 
    7704 
    7705 > fitmap #13 inMap #10 resolution 15
    7706 
    7707 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7708 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7709 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7710 steps = 44, shift = 0.00978, angle = 0.0169 degrees 
    7711  
    7712 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7713 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7714 Matrix rotation and translation 
    7715 0.99568421 0.08702637 -0.03223716 228.08034231 
    7716 0.08796740 -0.77432187 0.62664765 155.40833988 
    7717 0.02957301 -0.62677903 -0.77863565 174.30462722 
    7718 Axis -0.99878605 -0.04925309 0.00074985 
    7719 Axis point 0.00000000 102.89501271 61.83877548 
    7720 Rotation angle (degrees) 141.13591786 
    7721 Shift along axis -235.32710232 
    7722  
    7723 Average map value = 0.5299 for 10778 atoms, 7663 outside contour 
    7724 
    7725 > fitmap #13 inMap #10 resolution 15
    7726 
    7727 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7728 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7729 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7730 steps = 28, shift = 0.0647, angle = 0.0233 degrees 
    7731  
    7732 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7733 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7734 Matrix rotation and translation 
    7735 0.99568766 0.08711746 -0.03188279 228.12723976 
    7736 0.08782153 -0.77444653 0.62651405 155.41733053 
    7737 0.02988887 -0.62661234 -0.77875775 174.27983012 
    7738 Axis -0.99878710 -0.04923425 0.00056117 
    7739 Axis point 0.00000000 102.87874509 61.81102569 
    7740 Rotation angle (degrees) 141.14702761 
    7741 Shift along axis -235.40459983 
    7742  
    7743 Average map value = 0.5299 for 10778 atoms, 7665 outside contour 
    7744 
    7745 > fitmap #13 inMap #10 resolution 15
    7746 
    7747 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7748 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7749 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7750 steps = 48, shift = 0.0127, angle = 0.0186 degrees 
    7751  
    7752 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7753 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7754 Matrix rotation and translation 
    7755 0.99567694 0.08729412 -0.03173383 228.13410568 
    7756 0.08787260 -0.77458477 0.62633597 155.40474947 
    7757 0.03009499 -0.62641686 -0.77890706 174.29960827 
    7758 Axis -0.99878419 -0.04929436 0.00046120 
    7759 Axis point 0.00000000 102.85316403 61.82404834 
    7760 Rotation angle (degrees) 141.16065050 
    7761 Shift along axis -235.43692727 
    7762  
    7763 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7764 
    7765 > fitmap #13 inMap #10 resolution 15
    7766 
    7767 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7768 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7769 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7770 steps = 48, shift = 0.061, angle = 0.0358 degrees 
    7771  
    7772 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7773 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7774 Matrix rotation and translation 
    7775 0.99569442 0.08701972 -0.03193834 228.08284100 
    7776 0.08777138 -0.77426424 0.62674634 155.39352768 
    7777 0.02981065 -0.62685115 -0.77856853 174.31147269 
    7778 Axis -0.99878888 -0.04919777 0.00059888 
    7779 Axis point 0.00000000 102.89400672 61.82117177 
    7780 Rotation angle (degrees) 141.12975626 
    7781 Shift along axis -235.34722862 
    7782  
    7783 Average map value = 0.5298 for 10778 atoms, 7661 outside contour 
    7784 
    7785 > fitmap #13 inMap #10 resolution 15
    7786 
    7787 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7788 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7789 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7790 steps = 80, shift = 14.2, angle = 0.00492 degrees 
    7791  
    7792 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7793 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7794 Matrix rotation and translation 
    7795 0.99568922 0.08705308 -0.03200964 228.10045748 
    7796 0.08784306 -0.77427928 0.62671772 155.40417688 
    7797 0.02977338 -0.62682794 -0.77858865 174.29616398 
    7798 Axis -0.99878743 -0.04922685 0.00062943 
    7799 Axis point 0.00000000 102.89260237 61.81775211 
    7800 Rotation angle (degrees) 141.13159887 
    7801 Shift along axis -235.36421957 
    7802  
    7803 Average map value = 0.5299 for 10778 atoms, 7663 outside contour 
    7804 
    7805 > fitmap #13 inMap #10 resolution 15
    7806 
    7807 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7808 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7809 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7810 steps = 48, shift = 4.79, angle = 0.0334 degrees 
    7811  
    7812 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7813 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7814 Matrix rotation and translation 
    7815 0.99568858 0.08720246 -0.03162049 228.13613770 
    7816 0.08772776 -0.77454647 0.62640363 155.39622296 
    7817 0.03013248 -0.62647698 -0.77885726 174.29947965 
    7818 Axis -0.99878743 -0.04922902 0.00041877 
    7819 Axis point 0.00000000 102.85834687 61.81478912 
    7820 Rotation angle (degrees) 141.15609466 
    7821 Shift along axis -235.43651994 
    7822  
    7823 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7824 
    7825 > fitmap #13 inMap #10 resolution 15
    7826 
    7827 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7828 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7829 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7830 steps = 40, shift = 0.0487, angle = 0.0303 degrees 
    7831  
    7832 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7833 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7834 Matrix rotation and translation 
    7835 0.99567961 0.08717431 -0.03197843 228.10026937 
    7836 0.08791851 -0.77428589 0.62669897 155.40010257 
    7837 0.02987168 -0.62680292 -0.77860502 174.30641583 
    7838 Axis -0.99878473 -0.04928189 0.00059298 
    7839 Axis point 0.00000000 102.88337461 61.82282671 
    7840 Rotation angle (degrees) 141.13308660 
    7841 Shift along axis -235.37811807 
    7842  
    7843 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7844 
    7845 > fitmap #13 inMap #10 resolution 15
    7846 
    7847 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7848 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7849 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    7850 steps = 48, shift = 0.0162, angle = 0.0236 degrees 
    7851  
    7852 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7853 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7854 Matrix rotation and translation 
    7855 0.99570309 0.08688463 -0.03203576 228.07780332 
    7856 0.08772044 -0.77412352 0.62692727 155.39901759 
    7857 0.02967079 -0.62704366 -0.77841884 174.29932353 
    7858 Axis -0.99879121 -0.04914943 0.00066572 
    7859 Axis point 0.00000000 102.91466559 61.80995900 
    7860 Rotation angle (degrees) 141.11610565 
    7861 Shift along axis -235.32384447 
    7862  
    7863 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    7864 
    7865 > fitmap #13 inMap #10 resolution 15
    7866 
    7867 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7868 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7869 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    7870 steps = 44, shift = 0.00794, angle = 0.0133 degrees 
    7871  
    7872 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7873 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7874 Matrix rotation and translation 
    7875 0.99571375 0.08684271 -0.03181740 228.08053134 
    7876 0.08755279 -0.77417832 0.62688303 155.38872860 
    7877 0.02980796 -0.62698180 -0.77846343 174.30458424 
    7878 Axis -0.99879425 -0.04908906 0.00056563 
    7879 Axis point 0.00000000 102.90956843 61.80350321 
    7880 Rotation angle (degrees) 141.12015500 
    7881 Shift along axis -235.33481750 
    7882  
    7883 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    7884 
    7885 > fitmap #13 inMap #10 resolution 15
    7886 
    7887 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7888 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7889 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7890 steps = 68, shift = 5.26, angle = 0.0424 degrees 
    7891  
    7892 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7893 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7894 Matrix rotation and translation 
    7895 0.99567859 0.08725678 -0.03178483 228.12799994 
    7896 0.08787309 -0.77453522 0.62639717 155.40467980 
    7897 0.03003901 -0.62648333 -0.77885576 174.29941124 
    7898 Axis -0.99878462 -0.04928538 0.00049132 
    7899 Axis point 0.00000000 102.85952015 61.82362184 
    7900 Rotation angle (degrees) 141.15596857 
    7901 Shift along axis -235.42427911 
    7902  
    7903 Average map value = 0.5298 for 10778 atoms, 7669 outside contour 
    7904 
    7905 > fitmap #13 inMap #10 resolution 15
    7906 
    7907 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7908 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7909 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    7910 steps = 48, shift = 0.0431, angle = 0.0333 degrees 
    7911  
    7912 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7913 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7914 Matrix rotation and translation 
    7915 0.99569083 0.08701649 -0.03205888 228.08836037 
    7916 0.08784422 -0.77425346 0.62674945 155.40505581 
    7917 0.02971592 -0.62686491 -0.77856107 174.29887667 
    7918 Axis -0.99878786 -0.04921762 0.00065948 
    7919 Axis point 0.00000000 102.89826098 61.82007127 
    7920 Rotation angle (degrees) 141.12908780 
    7921 Shift along axis -235.34560676 
    7922  
    7923 Average map value = 0.5299 for 10778 atoms, 7662 outside contour 
    7924 
    7925 > fitmap #13 inMap #10 resolution 15
    7926 
    7927 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7928 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7929 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    7930 steps = 56, shift = 3.29, angle = 0.00633 degrees 
    7931  
    7932 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7933 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7934 Matrix rotation and translation 
    7935 0.99569103 0.08701865 -0.03204669 228.08434832 
    7936 0.08783500 -0.77418517 0.62683509 155.40250313 
    7937 0.02973635 -0.62694895 -0.77849262 174.30081973 
    7938 Axis -0.99878787 -0.04921753 0.00065032 
    7939 Axis point 0.00000000 102.90241320 61.81600426 
    7940 Rotation angle (degrees) 141.12283690 
    7941 Shift along axis -235.34305717 
    7942  
    7943 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    7944 
    7945 > fitmap #13 inMap #10 resolution 15
    7946 
    7947 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7948 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7949 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    7950 steps = 44, shift = 0.00811, angle = 0.0352 degrees 
    7951  
    7952 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7953 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7954 Matrix rotation and translation 
    7955 0.99573897 0.08664429 -0.03156791 228.07014252 
    7956 0.08724107 -0.77418807 0.62691446 155.37990545 
    7957 0.02987914 -0.62699722 -0.77844828 174.30697244 
    7958 Axis -0.99880134 -0.04894555 0.00047537 
    7959 Axis point 0.00000000 102.91948408 61.78903594 
    7960 Rotation angle (degrees) 141.11875700 
    7961 Shift along axis -235.31905799 
    7962  
    7963 Average map value = 0.5298 for 10778 atoms, 7664 outside contour 
    7964 
    7965 > fitmap #13 inMap #10 resolution 15
    7966 
    7967 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7968 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7969 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7970 steps = 64, shift = 0.0701, angle = 0.0525 degrees 
    7971  
    7972 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7973 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7974 Matrix rotation and translation 
    7975 0.99568058 0.08724699 -0.03174922 228.14340683 
    7976 0.08784385 -0.77455230 0.62638015 155.40601831 
    7977 0.03005843 -0.62646357 -0.77887091 174.29089622 
    7978 Axis -0.99878519 -0.04927395 0.00047583 
    7979 Axis point 0.00000000 102.85777199 61.81802086 
    7980 Rotation angle (degrees) 141.15734961 
    7981 Shift along axis -235.44079179 
    7982  
    7983 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    7984 
    7985 > fitmap #13 inMap #10 resolution 15
    7986 
    7987 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    7988 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    7989 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    7990 steps = 60, shift = 0.0121, angle = 0.0119 degrees 
    7991  
    7992 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    7993 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    7994 Matrix rotation and translation 
    7995 0.99567091 0.08728381 -0.03195067 228.13673456 
    7996 0.08799763 -0.77451569 0.62640384 155.41787664 
    7997 0.02992870 -0.62650371 -0.77884362 174.28587829 
    7998 Axis -0.99878245 -0.04932848 0.00056904 
    7999 Axis point 0.00000000 102.86281589 61.82438342 
    8000 Rotation angle (degrees) 141.15487246 
    8001 Shift along axis -235.42631824 
    8002  
    8003 Average map value = 0.5299 for 10778 atoms, 7667 outside contour 
    8004 
    8005 > fitmap #13 inMap #10 resolution 15
    8006 
    8007 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8008 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8009 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    8010 steps = 48, shift = 0.065, angle = 0.0318 degrees 
    8011  
    8012 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8013 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8014 Matrix rotation and translation 
    8015 0.99569473 0.08700387 -0.03197182 228.08347302 
    8016 0.08777865 -0.77423422 0.62678240 155.39620508 
    8017 0.02977889 -0.62689042 -0.77853813 174.30701018 
    8018 Axis -0.99878894 -0.04919620 0.00061725 
    8019 Axis point 0.00000000 102.89785927 61.81852030 
    8020 Rotation angle (degrees) 141.12698412 
    8021 Shift along axis -235.34456148 
    8022  
    8023 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    8024 
    8025 > fitmap #13 inMap #10 resolution 15
    8026 
    8027 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8028 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8029 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8030 steps = 48, shift = 0.0071, angle = 0.0216 degrees 
    8031  
    8032 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8033 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8034 Matrix rotation and translation 
    8035 0.99572148 0.08675427 -0.03181662 228.07262057 
    8036 0.08748007 -0.77411309 0.62697374 155.38629729 
    8037 0.02976306 -0.62707458 -0.77839041 174.30407124 
    8038 Axis -0.99879637 -0.04904561 0.00057807 
    8039 Axis point 0.00000000 102.91958954 61.79849085 
    8040 Rotation angle (degrees) 141.11349254 
    8041 Shift along axis -235.31836162 
    8042  
    8043 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8044 
    8045 > fitmap #13 inMap #10 resolution 15
    8046 
    8047 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8048 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8049 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8050 steps = 44, shift = 0.00437, angle = 0.00786 degrees 
    8051  
    8052 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8053 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8054 Matrix rotation and translation 
    8055 0.99572157 0.08677828 -0.03174840 228.07622286 
    8056 0.08745946 -0.77418834 0.62688369 155.38376073 
    8057 0.02982072 -0.62697835 -0.77846572 174.30742058 
    8058 Axis -0.99879645 -0.04904449 0.00054261 
    8059 Axis point 0.00000000 102.91159185 61.80145694 
    8060 Rotation angle (degrees) 141.12035987 
    8061 Shift along axis -235.32785708 
    8062  
    8063 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    8064 
    8065 > fitmap #13 inMap #10 resolution 15
    8066 
    8067 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8068 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8069 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8070 steps = 52, shift = 5.13, angle = 0.00862 degrees 
    8071  
    8072 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8073 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8074 Matrix rotation and translation 
    8075 0.99573366 0.08668098 -0.03163481 228.07224430 
    8076 0.08731218 -0.77419443 0.62689670 155.38044433 
    8077 0.02984861 -0.62698429 -0.77845987 174.30742436 
    8078 Axis -0.99879985 -0.04897564 0.00050279 
    8079 Axis point 0.00000000 102.91661396 61.79427673 
    8080 Rotation angle (degrees) 141.11981896 
    8081 Shift along axis -235.32073970 
    8082  
    8083 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8084 
    8085 > fitmap #13 inMap #10 resolution 15
    8086 
    8087 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8088 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8089 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8090 steps = 44, shift = 0.00427, angle = 0.0156 degrees 
    8091  
    8092 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8093 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8094 Matrix rotation and translation 
    8095 0.99571177 0.08685964 -0.03183322 228.07690733 
    8096 0.08757703 -0.77420038 0.62685241 155.38595433 
    8097 0.02980296 -0.62695222 -0.77848744 174.30926088 
    8098 Axis -0.99879370 -0.04910002 0.00057148 
    8099 Axis point 0.00000000 102.90622305 61.80896267 
    8100 Rotation angle (degrees) 141.12234809 
    8101 Shift along axis -235.33161744 
    8102  
    8103 Average map value = 0.5298 for 10778 atoms, 7661 outside contour 
    8104 
    8105 > fitmap #13 inMap #10 resolution 15
    8106 
    8107 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8108 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8109 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8110 steps = 108, shift = 25.6, angle = 0.0307 degrees 
    8111  
    8112 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8113 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8114 Matrix rotation and translation 
    8115 0.99569589 0.08706222 -0.03177645 228.12698764 
    8116 0.08771391 -0.77449857 0.62646480 155.40336909 
    8117 0.02993068 -0.62655570 -0.77880171 174.28932583 
    8118 Axis -0.99878945 -0.04918709 0.00051946 
    8119 Axis point 0.00000000 102.87360651 61.81440258 
    8120 Rotation angle (degrees) 141.15103615 
    8121 Shift along axis -235.40413030 
    8122  
    8123 Average map value = 0.5299 for 10778 atoms, 7667 outside contour 
    8124 
    8125 > fitmap #13 inMap #10 resolution 15
    8126 
    8127 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8128 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8129 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8130 steps = 76, shift = 0.285, angle = 0.0331 degrees 
    8131  
    8132 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8133 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8134 Matrix rotation and translation 
    8135 0.99566675 0.08721466 -0.03226761 228.09305819 
    8136 0.08813258 -0.77429664 0.62665562 155.42472547 
    8137 0.02966893 -0.62678403 -0.77862798 174.29166105 
    8138 Axis -0.99878113 -0.04935303 0.00073143 
    8139 Axis point 0.00000000 102.88915684 61.83110218 
    8140 Rotation angle (degrees) 141.13521275 
    8141 Shift along axis -235.35824159 
    8142  
    8143 Average map value = 0.5299 for 10778 atoms, 7661 outside contour 
    8144 
    8145 > fitmap #13 inMap #10 resolution 15
    8146 
    8147 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8148 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8149 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8150 steps = 48, shift = 0.0633, angle = 0.04 degrees 
    8151  
    8152 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8153 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8154 Matrix rotation and translation 
    8155 0.99569182 0.08717161 -0.03160360 228.14198649 
    8156 0.08768924 -0.77446799 0.62650605 155.38535002 
    8157 0.03013764 -0.62657828 -0.77877556 174.30144058 
    8158 Axis -0.99878828 -0.04921172 0.00041258 
    8159 Axis point 0.00000000 102.86120392 61.81104823 
    8160 Rotation angle (degrees) 141.14863128 
    8161 Shift along axis -235.44040969 
    8162  
    8163 Average map value = 0.5298 for 10778 atoms, 7668 outside contour 
    8164 
    8165 > fitmap #13 inMap #10 resolution 15
    8166 
    8167 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8168 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8169 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8170 steps = 60, shift = 0.0607, angle = 0.0344 degrees 
    8171  
    8172 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8173 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8174 Matrix rotation and translation 
    8175 0.99569519 0.08695265 -0.03209668 228.08641694 
    8176 0.08781985 -0.77429025 0.62670741 155.40158502 
    8177 0.02964180 -0.62682833 -0.77859335 174.30399778 
    8178 Axis -0.99878911 -0.04919183 0.00069097 
    8179 Axis point 0.00000000 102.89916690 61.82778814 
    8180 Rotation angle (degrees) 141.13204190 
    8181 Shift along axis -235.33428015 
    8182  
    8183 Average map value = 0.5299 for 10778 atoms, 7662 outside contour 
    8184 
    8185 > fitmap #13 inMap #10 resolution 15
    8186 
    8187 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8188 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8189 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8190 steps = 48, shift = 0.0572, angle = 0.0349 degrees 
    8191  
    8192 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8193 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8194 Matrix rotation and translation 
    8195 0.99568129 0.08722533 -0.03178642 228.13580166 
    8196 0.08785111 -0.77456878 0.62635876 155.40468998 
    8197 0.03001366 -0.62644621 -0.77888659 174.29509494 
    8198 Axis -0.99878540 -0.04926946 0.00049889 
    8199 Axis point 0.00000000 102.85827144 61.82371311 
    8200 Rotation angle (degrees) 141.15878635 
    8201 Shift along axis -235.42845733 
    8202  
    8203 Average map value = 0.5299 for 10778 atoms, 7666 outside contour 
    8204 
    8205 > fitmap #13 inMap #10 resolution 15
    8206 
    8207 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8208 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8209 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8210 steps = 40, shift = 0.00796, angle = 0.00829 degrees 
    8211  
    8212 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8213 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8214 Matrix rotation and translation 
    8215 0.99567217 0.08728195 -0.03191663 228.13180296 
    8216 0.08797599 -0.77454150 0.62637496 155.41184028 
    8217 0.02995055 -0.62647205 -0.77886824 174.29310021 
    8218 Axis -0.99878282 -0.04932117 0.00055330 
    8219 Axis point 0.00000000 102.85944159 61.82852225 
    8220 Rotation angle (degrees) 141.15711866 
    8221 Shift along axis -235.42278143 
    8222  
    8223 Average map value = 0.5299 for 10778 atoms, 7670 outside contour 
    8224 
    8225 > fitmap #13 inMap #10 resolution 15
    8226 
    8227 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8228 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8229 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8230 steps = 48, shift = 0.0342, angle = 0.0354 degrees 
    8231  
    8232 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8233 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8234 Matrix rotation and translation 
    8235 0.99570700 0.08709424 -0.03133746 228.14928182 
    8236 0.08746387 -0.77452186 0.62647096 155.38182639 
    8237 0.03029054 -0.62652246 -0.77881454 174.30342007 
    8238 Axis -0.99879258 -0.04912523 0.00029464 
    8239 Axis point 0.00000000 102.86144196 61.79834299 
    8240 Rotation angle (degrees) 141.15217797 
    8241 Shift along axis -235.45562204 
    8242  
    8243 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    8244 
    8245 > fitmap #13 inMap #10 resolution 15
    8246 
    8247 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8248 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8249 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8250 steps = 44, shift = 0.021, angle = 0.0228 degrees 
    8251  
    8252 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8253 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8254 Matrix rotation and translation 
    8255 0.99568367 0.08722866 -0.03170265 228.14433271 
    8256 0.08779969 -0.77454114 0.62640015 155.40446801 
    8257 0.03008512 -0.62647993 -0.77885672 174.29117601 
    8258 Axis -0.99878605 -0.04925672 0.00045522 
    8259 Axis point 0.00000000 102.85922661 61.81448573 
    8260 Rotation angle (degrees) 141.15605052 
    8261 Shift along axis -235.44274997 
    8262  
    8263 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    8264 
    8265 > fitmap #13 inMap #10 resolution 15
    8266 
    8267 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8268 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8269 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8270 steps = 48, shift = 0.00693, angle = 0.0204 degrees 
    8271  
    8272 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8273 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8274 Matrix rotation and translation 
    8275 0.99568225 0.08726861 -0.03163929 228.14052001 
    8276 0.08778857 -0.77448878 0.62646649 155.40234459 
    8277 0.03016657 -0.62653914 -0.77880593 174.29228607 
    8278 Axis -0.99878560 -0.04926618 0.00041447 
    8279 Axis point 0.00000000 102.85967181 61.80790150 
    8280 Rotation angle (degrees) 141.15140510 
    8281 Shift along axis -235.44730616 
    8282  
    8283 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    8284 
    8285 > fitmap #13 inMap #10 resolution 15
    8286 
    8287 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8288 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8289 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8290 steps = 40, shift = 0.0254, angle = 0.0282 degrees 
    8291  
    8292 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8293 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8294 Matrix rotation and translation 
    8295 0.99567498 0.08717534 -0.03212152 228.12130134 
    8296 0.08801722 -0.77445053 0.62648169 155.42331902 
    8297 0.02973721 -0.62659941 -0.77877396 174.27949620 
    8298 Axis -0.99878353 -0.04930525 0.00067103 
    8299 Axis point 0.00000000 102.87708512 61.82614146 
    8300 Rotation angle (degrees) 141.14853023 
    8301 Shift along axis -235.39003747 
    8302  
    8303 Average map value = 0.5299 for 10778 atoms, 7669 outside contour 
    8304 
    8305 > fitmap #13 inMap #10 resolution 15
    8306 
    8307 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8308 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8309 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8310 steps = 48, shift = 0.0273, angle = 0.0291 degrees 
    8311  
    8312 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8313 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8314 Matrix rotation and translation 
    8315 0.99564417 0.08754504 -0.03207096 228.15736927 
    8316 0.08828377 -0.77464327 0.62620583 155.42516991 
    8317 0.02997765 -0.62630954 -0.77899788 174.28647434 
    8318 Axis -0.99877501 -0.04947852 0.00058907 
    8319 Axis point 0.00000000 102.83786766 61.84203110 
    8320 Rotation angle (degrees) 141.16896986 
    8321 Shift along axis -235.46541940 
    8322  
    8323 Average map value = 0.5299 for 10778 atoms, 7670 outside contour 
    8324 
    8325 > scalebar 50
    8326 
    8327 > scalebar off
    8328 
    8329 > scalebar 50
    8330 
    8331 > save /Users/francescappadoo/Desktop/image22.png supersample 3
    8332 
    8333 > fitmap #13 inMap #10
    8334 
    8335 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8336 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8337 average map value = 0.5316, steps = 100 
    8338 shifted from previous position = 17.7 
    8339 rotated from previous position = 1.99 degrees 
    8340 atoms outside contour = 7721, contour level = 0.41421 
    8341  
    8342 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8343 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8344 Matrix rotation and translation 
    8345 0.99807885 0.05314340 -0.03184950 226.93730242 
    8346 0.06139509 -0.77929797 0.62363874 154.51303327 
    8347 0.00832202 -0.62439605 -0.78106358 173.55265380 
    8348 Axis -0.99946055 -0.03217045 0.00660818 
    8349 Axis point 0.00000000 104.30612563 61.73189123 
    8350 Rotation angle (degrees) 141.36519615 
    8351 Shift along axis -230.63876856 
    8352  
    8353 
    8354 > select add #13
    8355 
    8356 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    8357 
    8358 > view matrix models
    8359 > #13,-0.32421,-0.81016,0.4884,310.31,0.94187,-0.22835,0.24644,191.55,-0.088132,0.53991,0.8371,15.185
    8360 
    8361 > fitmap #13 inMap #10
    8362 
    8363 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8364 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8365 average map value = 0.5316, steps = 68 
    8366 shifted from previous position = 6.11 
    8367 rotated from previous position = 0.0426 degrees 
    8368 atoms outside contour = 7720, contour level = 0.41421 
    8369  
    8370 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8371 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8372 Matrix rotation and translation 
    8373 0.99809759 0.05307249 -0.03137708 226.88362940 
    8374 0.06103979 -0.77896048 0.62409508 154.48777433 
    8375 0.00868076 -0.62482306 -0.78071813 173.56445368 
    8376 Axis -0.99946571 -0.03205689 0.00637595 
    8377 Axis point 0.00000000 104.32737056 61.68783936 
    8378 Rotation angle (degrees) 141.33301170 
    8379 Shift along axis -230.60816662 
    8380  
    8381 
    8382 > ui mousemode right "rotate selected models"
    8383 
    8384 > view matrix models
    8385 > #13,-0.10358,-0.7087,0.69787,318.24,0.92886,-0.31982,-0.18691,196.27,0.35566,0.62886,0.69141,25.615
    8386 
    8387 > fitmap #13 inMap #10
    8388 
    8389 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8390 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8391 average map value = 0.5316, steps = 116 
    8392 shifted from previous position = 1.56 
    8393 rotated from previous position = 29.7 degrees 
    8394 atoms outside contour = 7721, contour level = 0.41421 
    8395  
    8396 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8397 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8398 Matrix rotation and translation 
    8399 0.99808315 0.05311880 -0.03175564 226.92863099 
    8400 0.06131655 -0.77924870 0.62370803 154.50893480 
    8401 0.00838506 -0.62445963 -0.78101207 173.55414417 
    8402 Axis -0.99946174 -0.03214240 0.00656430 
    8403 Axis point 0.00000000 104.30998660 61.72373375 
    8404 Rotation angle (degrees) 141.36037523 
    8405 Shift along axis -230.63351180 
    8406  
    8407 
    8408 > fitmap #13 inMap #10
    8409 
    8410 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8411 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8412 average map value = 0.5316, steps = 64 
    8413 shifted from previous position = 0.0452 
    8414 rotated from previous position = 0.00758 degrees 
    8415 atoms outside contour = 7720, contour level = 0.41421 
    8416  
    8417 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8418 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8419 Matrix rotation and translation 
    8420 0.99808962 0.05305819 -0.03165346 226.88597642 
    8421 0.06120493 -0.77921842 0.62375682 154.49712301 
    8422 0.00843043 -0.62450256 -0.78097725 173.57348426 
    8423 Axis -0.99946355 -0.03209461 0.00652297 
    8424 Axis point 0.00000000 104.31463129 61.72614788 
    8425 Rotation angle (degrees) 141.35709199 
    8426 Shift along axis -230.59057266 
    8427  
    8428 
    8429 > fitmap #13 inMap #10
    8430 
    8431 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8432 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8433 average map value = 0.5316, steps = 48 
    8434 shifted from previous position = 0.0222 
    8435 rotated from previous position = 0.0391 degrees 
    8436 atoms outside contour = 7718, contour level = 0.41421 
    8437  
    8438 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8439 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8440 Matrix rotation and translation 
    8441 0.99810495 0.05296288 -0.03132794 226.86270065 
    8442 0.06092208 -0.77886307 0.62422814 154.48172653 
    8443 0.00866073 -0.62495377 -0.78061371 173.56232726 
    8444 Axis -0.99946775 -0.03199485 0.00636814 
    8445 Axis point 0.00000000 104.33917735 61.67734433 
    8446 Rotation angle (degrees) 141.32342112 
    8447 Shift along axis -230.57930287 
    8448  
    8449 
    8450 > view matrix models
    8451 > #13,-0.24727,-0.7953,0.5535,313.64,0.96855,-0.18646,0.16477,197.34,-0.027831,0.57683,0.81639,12.967
    8452 
    8453 > ui mousemode right "translate selected models"
    8454 
    8455 > view matrix models
    8456 > #13,-0.24727,-0.7953,0.5535,309.39,0.96855,-0.18646,0.16477,192.9,-0.027831,0.57683,0.81639,17.932
    8457 
    8458 > view matrix models
    8459 > #13,-0.24727,-0.7953,0.5535,309.08,0.96855,-0.18646,0.16477,192.77,-0.027831,0.57683,0.81639,17.543
    8460 
    8461 > fitmap #13 inMap #10 resolution 15
    8462 
    8463 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8464 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8465 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8466 steps = 72, shift = 8.25, angle = 6.03 degrees 
    8467  
    8468 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8469 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8470 Matrix rotation and translation 
    8471 0.99567742 0.08726150 -0.03181045 228.13536283 
    8472 0.08789336 -0.77454424 0.62638322 155.40700578 
    8473 0.03002052 -0.62647157 -0.77886593 174.29447135 
    8474 Axis -0.99878428 -0.04929207 0.00050373 
    8475 Axis point 0.00000000 102.85859325 61.82314149 
    8476 Rotation angle (degrees) 141.15689954 
    8477 Shift along axis -235.43054968 
    8478  
    8479 Average map value = 0.5299 for 10778 atoms, 7667 outside contour 
    8480 
    8481 > fitmap #13 inMap #10 resolution 15
    8482 
    8483 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8484 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8485 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8486 steps = 76, shift = 13.8, angle = 0.0412 degrees 
    8487  
    8488 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8489 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8490 Matrix rotation and translation 
    8491 0.99570414 0.08691606 -0.03191964 228.07759384 
    8492 0.08767427 -0.77417301 0.62687266 155.39214125 
    8493 0.02977397 -0.62697825 -0.77846759 174.30493603 
    8494 Axis -0.99879153 -0.04914384 0.00060397 
    8495 Axis point 0.00000000 102.90648610 61.80992191 
    8496 Rotation angle (degrees) 141.12054191 
    8497 Shift along axis -235.33325950 
    8498  
    8499 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    8500 
    8501 > fitmap #13 inMap #10 resolution 15
    8502 
    8503 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8504 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8505 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8506 steps = 48, shift = 0.00726, angle = 0.0197 degrees 
    8507  
    8508 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8509 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8510 Matrix rotation and translation 
    8511 0.99573213 0.08667509 -0.03170087 228.06804029 
    8512 0.08734625 -0.77413267 0.62696826 155.37977757 
    8513 0.02980184 -0.62706140 -0.77839954 174.30795889 
    8514 Axis -0.99879936 -0.04898518 0.00053456 
    8515 Axis point 0.00000000 102.92143639 61.79471214 
    8516 Rotation angle (degrees) 141.11431777 
    8517 Shift along axis -235.31234026 
    8518  
    8519 Average map value = 0.5298 for 10778 atoms, 7664 outside contour 
    8520 
    8521 > scalebar off
    8522 
    8523 > scalebar 50
    8524 
    8525 > fitmap #13 inMap #10 resolution 15
    8526 
    8527 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8528 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8529 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8530 steps = 80, shift = 14.9, angle = 0.0529 degrees 
    8531  
    8532 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8533 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8534 Matrix rotation and translation 
    8535 0.99567780 0.08724860 -0.03183388 228.13367643 
    8536 0.08789739 -0.77453109 0.62639892 155.40815959 
    8537 0.02999609 -0.62648962 -0.77885235 174.29341856 
    8538 Axis -0.99878438 -0.04928994 0.00051720 
    8539 Axis point 0.00000000 102.86088674 61.82295166 
    8540 Rotation angle (degrees) 141.15566090 
    8541 Shift along axis -235.42626670 
    8542  
    8543 Average map value = 0.5299 for 10778 atoms, 7667 outside contour 
    8544 
    8545 > fitmap #13 inMap #10 resolution 15
    8546 
    8547 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8548 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8549 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8550 steps = 44, shift = 0.055, angle = 0.0339 degrees 
    8551  
    8552 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8553 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8554 Matrix rotation and translation 
    8555 0.99568820 0.08699283 -0.03220646 228.08478497 
    8556 0.08792034 -0.77428931 0.62669453 155.40879278 
    8557 0.02958080 -0.62682396 -0.77859919 174.29935037 
    8558 Axis -0.99878713 -0.04923128 0.00073903 
    8559 Axis point 0.00000000 102.89906732 61.83161784 
    8560 Rotation angle (degrees) 141.13258551 
    8561 Shift along axis -235.33030967 
    8562  
    8563 Average map value = 0.5299 for 10778 atoms, 7661 outside contour 
    8564 
    8565 > fitmap #13 inMap #10 resolution 15
    8566 
    8567 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8568 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8569 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8570 steps = 28, shift = 0.0546, angle = 0.0272 degrees 
    8571  
    8572 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8573 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8574 Matrix rotation and translation 
    8575 0.99569191 0.08708893 -0.03182980 228.12491798 
    8576 0.08776724 -0.77447440 0.62648725 155.41127386 
    8577 0.02990872 -0.62658192 -0.77878146 174.28453835 
    8578 Axis -0.99878830 -0.04921015 0.00054066 
    8579 Axis point 0.00000000 102.87662277 61.81264078 
    8580 Rotation angle (degrees) 141.14918987 
    8581 Shift along axis -235.40208168 
    8582  
    8583 Average map value = 0.5299 for 10778 atoms, 7667 outside contour 
    8584 
    8585 > fitmap #13 inMap #10 resolution 15
    8586 
    8587 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8588 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8589 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8590 steps = 48, shift = 0.0469, angle = 0.0264 degrees 
    8591  
    8592 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8593 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8594 Matrix rotation and translation 
    8595 0.99569405 0.08701321 -0.03196955 228.09456186 
    8596 0.08778297 -0.77420113 0.62682271 155.40022234 
    8597 0.02979098 -0.62693004 -0.77850576 174.29785552 
    8598 Axis -0.99878872 -0.04920087 0.00061322 
    8599 Axis point 0.00000000 102.89981708 61.81098600 
    8600 Rotation angle (degrees) 141.12402789 
    8601 Shift along axis -235.35721711 
    8602  
    8603 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8604 
    8605 > fitmap #13 inMap #10 resolution 15
    8606 
    8607 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8608 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8609 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8610 steps = 44, shift = 0.00282, angle = 0.00349 degrees 
    8611  
    8612 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8613 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8614 Matrix rotation and translation 
    8615 0.99569275 0.08703335 -0.03195543 228.09699830 
    8616 0.08779146 -0.77423544 0.62677914 155.40044464 
    8617 0.02980965 -0.62688487 -0.77854141 174.29845341 
    8618 Axis -0.99878837 -0.04920796 0.00060398 
    8619 Axis point 0.00000000 102.89600114 61.81282031 
    8620 Rotation angle (degrees) 141.12728151 
    8621 Shift along axis -235.36229497 
    8622  
    8623 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8624 
    8625 > fitmap #13 inMap #10 resolution 15
    8626 
    8627 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8628 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8629 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8630 steps = 60, shift = 0.00223, angle = 0.00194 degrees 
    8631  
    8632 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8633 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8634 Matrix rotation and translation 
    8635 0.99569145 0.08703915 -0.03198010 228.09842865 
    8636 0.08781211 -0.77424780 0.62676099 155.40211590 
    8637 0.02979221 -0.62686881 -0.77855502 174.29722222 
    8638 Axis -0.99878802 -0.04921504 0.00061583 
    8639 Axis point 0.00000000 102.89521042 61.81443142 
    8640 Rotation angle (degrees) 141.12852576 
    8641 Shift along axis -235.36276127 
    8642  
    8643 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8644 
    8645 > scalebar off
    8646 
    8647 > scalebar 50
    8648 
    8649 > select subtract #13
    8650 
    8651 Nothing selected 
    8652 
    8653 > fitmap #13 inMap #10 resolution 15
    8654 
    8655 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8656 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8657 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8658 steps = 84, shift = 16.8, angle = 0.0289 degrees 
    8659  
    8660 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8661 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8662 Matrix rotation and translation 
    8663 0.99568149 0.08723152 -0.03176523 228.14005007 
    8664 0.08783962 -0.77450563 0.62643849 155.40628737 
    8665 0.03004282 -0.62652347 -0.77882332 174.29095795 
    8666 Axis -0.99878540 -0.04926964 0.00048474 
    8667 Axis point 0.00000000 102.86258059 61.81572986 
    8668 Rotation angle (degrees) 141.15300407 
    8669 Shift along axis -235.43527538 
    8670  
    8671 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    8672 
    8673 > fitmap #13 inMap #10 resolution 15
    8674 
    8675 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8676 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8677 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    8678 steps = 60, shift = 1.9, angle = 0.0333 degrees 
    8679  
    8680 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8681 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8682 Matrix rotation and translation 
    8683 0.99570739 0.08690772 -0.03184079 228.08572887 
    8684 0.08762056 -0.77422461 0.62681644 155.39210630 
    8685 0.02982325 -0.62691568 -0.77851609 174.30363601 
    8686 Axis -0.99879248 -0.04912499 0.00056789 
    8687 Axis point 0.00000000 102.90287945 61.80762602 
    8688 Rotation angle (degrees) 141.12496249 
    8689 Shift along axis -235.34496087 
    8690  
    8691 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8692 
    8693 > fitmap #13 inMap #10 resolution 15
    8694 
    8695 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8696 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8697 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8698 steps = 48, shift = 0.069, angle = 0.0392 degrees 
    8699  
    8700 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8701 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8702 Matrix rotation and translation 
    8703 0.99567977 0.08726980 -0.03171399 228.14760262 
    8704 0.08784000 -0.77456129 0.62636962 155.40768129 
    8705 0.03009871 -0.62644933 -0.77888080 174.28880143 
    8706 Axis -0.99878495 -0.04927894 0.00045458 
    8707 Axis point 0.00000000 102.85591228 61.81516720 
    8708 Rotation angle (degrees) 141.15825046 
    8709 Shift along axis -235.44949067 
    8710  
    8711 Average map value = 0.5298 for 10778 atoms, 7668 outside contour 
    8712 
    8713 > fitmap #13 inMap #10 resolution 15
    8714 
    8715 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8716 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8717 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8718 steps = 44, shift = 0.0233, angle = 0.0326 degrees 
    8719  
    8720 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8721 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8722 Matrix rotation and translation 
    8723 0.99566390 0.08724625 -0.03227220 228.13397706 
    8724 0.08816832 -0.77446818 0.62643862 155.43167350 
    8725 0.02966062 -0.62656771 -0.77880238 174.26741666 
    8726 Axis -0.99878043 -0.04936709 0.00073499 
    8727 Axis point 0.00000000 102.87225487 61.83036469 
    8728 Rotation angle (degrees) 141.15114075 
    8729 Shift along axis -235.40087750 
    8730  
    8731 Average map value = 0.5299 for 10778 atoms, 7671 outside contour 
    8732 
    8733 > fitmap #13 inMap #10 resolution 15
    8734 
    8735 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8736 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8737 correlation = 0.4553, correlation about mean = 0.203, overlap = 208.1 
    8738 steps = 48, shift = 0.0795, angle = 0.0452 degrees 
    8739  
    8740 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8741 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8742 Matrix rotation and translation 
    8743 0.99571208 0.08683608 -0.03188967 228.07299228 
    8744 0.08759275 -0.77417009 0.62688766 155.38643968 
    8745 0.02974842 -0.62699293 -0.77845674 174.30724325 
    8746 Axis -0.99879376 -0.04909857 0.00060273 
    8747 Axis point 0.00000000 102.91006457 61.80931682 
    8748 Rotation angle (degrees) 141.11955113 
    8749 Shift along axis -235.32207251 
    8750  
    8751 Average map value = 0.5298 for 10778 atoms, 7663 outside contour 
    8752 
    8753 > fitmap #13 inMap #10 resolution 15
    8754 
    8755 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8756 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8757 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8758 steps = 48, shift = 0.0804, angle = 0.0419 degrees 
    8759  
    8760 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8761 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8762 Matrix rotation and translation 
    8763 0.99571013 0.08702954 -0.03141966 228.14663013 
    8764 0.08746453 -0.77451173 0.62648343 155.37357983 
    8765 0.03018766 -0.62654402 -0.77880119 174.30415763 
    8766 Axis -0.99879344 -0.04910745 0.00034673 
    8767 Axis point 0.00000000 102.86272705 61.80441393 
    8768 Rotation angle (degrees) 141.15096397 
    8769 Shift along axis -235.44092226 
    8770  
    8771 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    8772 
    8773 > fitmap #13 inMap #10 resolution 15
    8774 
    8775 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8776 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8777 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8778 steps = 56, shift = 0.0444, angle = 0.0252 degrees 
    8779  
    8780 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8781 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8782 Matrix rotation and translation 
    8783 0.99568903 0.08712791 -0.03181312 228.11520406 
    8784 0.08778262 -0.77437803 0.62660420 155.38547827 
    8785 0.02995933 -0.62669559 -0.77868805 174.31252089 
    8786 Axis -0.99878743 -0.04922808 0.00052175 
    8787 Axis point 0.00000000 102.87340532 61.82367428 
    8788 Rotation angle (degrees) 141.14065513 
    8789 Shift along axis -235.39697799 
    8790  
    8791 Average map value = 0.5298 for 10778 atoms, 7669 outside contour 
    8792 
    8793 > fitmap #13 inMap #10 resolution 15
    8794 
    8795 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8796 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8797 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8798 steps = 60, shift = 0.0424, angle = 0.0193 degrees 
    8799  
    8800 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8801 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8802 Matrix rotation and translation 
    8803 0.99567719 0.08727749 -0.03177358 228.13803798 
    8804 0.08788328 -0.77455685 0.62636904 155.40625675 
    8805 0.03005745 -0.62645375 -0.77887884 174.29455393 
    8806 Axis -0.99878423 -0.04929338 0.00048296 
    8807 Axis point 0.00000000 102.85614943 61.82188290 
    8808 Rotation angle (degrees) 141.15807520 
    8809 Shift along axis -235.43699602 
    8810  
    8811 Average map value = 0.5298 for 10778 atoms, 7666 outside contour 
    8812 
    8813 > fitmap #13 inMap #10 resolution 15
    8814 
    8815 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8816 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8817 correlation = 0.4552, correlation about mean = 0.203, overlap = 208.1 
    8818 steps = 44, shift = 0.0637, angle = 0.0357 degrees 
    8819  
    8820 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8821 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8822 Matrix rotation and translation 
    8823 0.99568646 0.08705179 -0.03210077 228.07936664 
    8824 0.08789822 -0.77425350 0.62674188 155.41108371 
    8825 0.02970485 -0.62686001 -0.77856544 174.29944552 
    8826 Axis -0.99878662 -0.04924261 0.00067438 
    8827 Axis point 0.00000000 102.89904963 61.82221389 
    8828 Rotation angle (degrees) 141.12948917 
    8829 Shift along axis -235.33792300 
    8830  
    8831 Average map value = 0.5299 for 10778 atoms, 7664 outside contour 
    8832 
    8833 > scalebar off
    8834 
    8835 > scalebar 50
    8836 
    8837 > fitmap #13 inMap #10 resolution 15
    8838 
    8839 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8840 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8841 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    8842 steps = 44, shift = 0.0537, angle = 0.0284 degrees 
    8843  
    8844 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8845 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8846 Matrix rotation and translation 
    8847 0.99568248 0.08719145 -0.03184418 228.12705364 
    8848 0.08785812 -0.77450899 0.62643175 155.40751933 
    8849 0.02995588 -0.62652490 -0.77882552 174.29341702 
    8850 Axis -0.99878568 -0.04926349 0.00053143 
    8851 Axis point 0.00000000 102.86640565 61.82177849 
    8852 Rotation angle (degrees) 141.15321289 
    8853 Shift along axis -235.41332552 
    8854  
    8855 Average map value = 0.5299 for 10778 atoms, 7669 outside contour 
    8856 
    8857 > fitmap #13 inMap #10 resolution 15
    8858 
    8859 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8860 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8861 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8862 steps = 44, shift = 0.0393, angle = 0.0245 degrees 
    8863  
    8864 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8865 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8866 Matrix rotation and translation 
    8867 0.99566149 0.08732232 -0.03214055 228.11145140 
    8868 0.08813746 -0.77431003 0.62663843 155.40350642 
    8869 0.02983276 -0.62675255 -0.77864706 174.30718705 
    8870 Axis -0.99877965 -0.04938418 0.00064955 
    8871 Axis point 0.00000000 102.87243906 61.83605869 
    8872 Rotation angle (degrees) 141.13693664 
    8873 Shift along axis -235.39432750 
    8874  
    8875 Average map value = 0.5298 for 10778 atoms, 7665 outside contour 
    8876 
    8877 > fitmap #13 inMap #10 resolution 15
    8878 
    8879 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8880 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8881 correlation = 0.4553, correlation about mean = 0.2031, overlap = 208.1 
    8882 steps = 60, shift = 1.23, angle = 0.0317 degrees 
    8883  
    8884 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8885 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8886 Matrix rotation and translation 
    8887 0.99570888 0.08688497 -0.03185640 228.08278282 
    8888 0.08761352 -0.77424390 0.62679359 155.38755730 
    8889 0.02979430 -0.62689501 -0.77853384 174.30619641 
    8890 Axis -0.99879291 -0.04911609 0.00058043 
    8891 Axis point 0.00000000 102.90126488 61.81187064 
    8892 Rotation angle (degrees) 141.12658534 
    8893 Shift along axis -235.33832322 
    8894  
    8895 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    8896 
    8897 > select add #13
    8898 
    8899 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    8900 
    8901 > view matrix models
    8902 > #13,-0.37281,-0.66202,-0.65019,319.16,0.73256,0.22009,-0.64414,208.72,0.56953,-0.71644,0.40292,-22.924
    8903 
    8904 > fitmap #13 inMap #10 resolution 15
    8905 
    8906 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    8907 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    8908 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208.1 
    8909 steps = 64, shift = 2.16, angle = 0.00861 degrees 
    8910  
    8911 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    8912 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8913 Matrix rotation and translation 
    8914 0.99569655 0.08698640 -0.03196468 228.09146542 
    8915 0.08775975 -0.77421812 0.62680498 155.39905096 
    8916 0.02977586 -0.62691278 -0.77852024 174.29950844 
    8917 Axis -0.99878943 -0.04918635 0.00061610 
    8918 Axis point 0.00000000 102.90022530 61.81264639 
    8919 Rotation angle (degrees) 141.12535053 
    8920 Shift along axis -235.35146991 
    8921  
    8922 Average map value = 0.5298 for 10778 atoms, 7662 outside contour 
    8923 
    8924 > view matrix models
    8925 > #13,-0.37281,-0.66208,-0.65013,319.57,0.73247,0.22015,-0.64422,208.7,0.56965,-0.71637,0.40288,-21.717
    8926 
    8927 > fitmap #13 inMap #10
    8928 
    8929 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8930 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8931 average map value = 0.5316, steps = 68 
    8932 shifted from previous position = 0.756 
    8933 rotated from previous position = 1.97 degrees 
    8934 atoms outside contour = 7721, contour level = 0.41421 
    8935  
    8936 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8937 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8938 Matrix rotation and translation 
    8939 0.99808751 0.05307947 -0.03168414 226.92632269 
    8940 0.06124078 -0.77922258 0.62374810 154.50838201 
    8941 0.00841921 -0.62449557 -0.78098297 173.55276149 
    8942 Axis -0.99946296 -0.03211057 0.00653472 
    8943 Axis point 0.00000000 104.31423322 61.71653570 
    8944 Rotation angle (degrees) 141.35764144 
    8945 Shift along axis -230.63168666 
    8946  
    8947 
    8948 > fitmap #13 inMap #10
    8949 
    8950 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8951 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8952 average map value = 0.5316, steps = 44 
    8953 shifted from previous position = 0.0453 
    8954 rotated from previous position = 0.0216 degrees 
    8955 atoms outside contour = 7720, contour level = 0.41421 
    8956  
    8957 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8958 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8959 Matrix rotation and translation 
    8960 0.99808968 0.05314263 -0.03150936 226.88182052 
    8961 0.06117813 -0.77902048 0.62400664 154.50961184 
    8962 0.00861490 -0.62474229 -0.78078349 173.55448169 
    8963 Axis -0.99946351 -0.03211433 0.00643139 
    8964 Axis point 0.00000000 104.32710531 61.69197086 
    8965 Rotation angle (degrees) 141.33912238 
    8966 Shift along axis -230.60587700 
    8967  
    8968 
    8969 > fitmap #13 inMap #10
    8970 
    8971 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8972 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8973 average map value = 0.5316, steps = 80 
    8974 shifted from previous position = 0.0222 
    8975 rotated from previous position = 0.0204 degrees 
    8976 atoms outside contour = 7719, contour level = 0.41421 
    8977  
    8978 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    8979 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    8980 Matrix rotation and translation 
    8981 0.99810373 0.05304088 -0.03123468 226.87950831 
    8982 0.06092532 -0.77890843 0.62417122 154.48733828 
    8983 0.00877762 -0.62489062 -0.78066296 173.56506730 
    8984 Axis -0.99946742 -0.03201682 0.00630893 
    8985 Axis point 0.00000000 104.33357694 61.67528442 
    8986 Rotation angle (degrees) 141.32781438 
    8987 Shift along axis -230.60986037 
    8988  
    8989 
    8990 > view matrix models
    8991 > #13,-0.39484,-0.64673,-0.65257,318.81,0.73992,0.19721,-0.64314,207.58,0.54463,-0.73679,0.40066,-23.225
    8992 
    8993 > fitmap #13 inMap #10
    8994 
    8995 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    8996 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    8997 average map value = 0.5316, steps = 72 
    8998 shifted from previous position = 1.59 
    8999 rotated from previous position = 0.0397 degrees 
    9000 atoms outside contour = 7720, contour level = 0.41421 
    9001  
    9002 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9003 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9004 Matrix rotation and translation 
    9005 0.99806638 0.05341418 -0.03178724 226.93846768 
    9006 0.06156364 -0.77899120 0.62400528 154.51861376 
    9007 0.00856874 -0.62475564 -0.78077331 173.53879706 
    9008 Axis -0.99945696 -0.03229927 0.00652249 
    9009 Axis point 0.00000000 104.31152546 61.70024692 
    9010 Rotation angle (degrees) 141.33838198 
    9011 Shift along axis -230.67416386 
    9012  
    9013 
    9014 > fitmap #13 inMap #10
    9015 
    9016 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9017 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9018 average map value = 0.5316, steps = 60 
    9019 shifted from previous position = 0.00948 
    9020 rotated from previous position = 0.0237 degrees 
    9021 atoms outside contour = 7721, contour level = 0.41421 
    9022  
    9023 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9024 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9025 Matrix rotation and translation 
    9026 0.99807600 0.05320160 -0.03184147 226.93548919 
    9027 0.06143449 -0.77921743 0.62373548 154.51782658 
    9028 0.00837228 -0.62449160 -0.78098665 173.55015365 
    9029 Axis -0.99945973 -0.03219929 0.00659210 
    9030 Axis point 0.00000000 104.31030534 61.72402988 
    9031 Rotation angle (degrees) 141.35810219 
    9032 Shift along axis -230.64418762 
    9033  
    9034 
    9035 > view matrix models
    9036 > #13,-0.39516,-0.64645,-0.65265,317.77,0.73948,0.19765,-0.64351,207.16,0.54499,-0.73691,0.39994,-24.312
    9037 
    9038 > fitmap #13 inMap #10
    9039 
    9040 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9041 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9042 average map value = 0.5316, steps = 88 
    9043 shifted from previous position = 3.11 
    9044 rotated from previous position = 0.0512 degrees 
    9045 atoms outside contour = 7718, contour level = 0.41421 
    9046  
    9047 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9048 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9049 Matrix rotation and translation 
    9050 0.99811051 0.05296718 -0.03114307 226.86566273 
    9051 0.06081083 -0.77893467 0.62414964 154.47464102 
    9052 0.00880101 -0.62486416 -0.78068388 173.57037302 
    9053 Axis -0.99946933 -0.03196353 0.00627654 
    9054 Axis point 0.00000000 104.33146015 61.67557992 
    9055 Rotation angle (degrees) 141.32966578 
    9056 Shift along axis -230.59340476 
    9057  
    9058 
    9059 > fitmap #13 inMap #10
    9060 
    9061 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9062 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9063 average map value = 0.5316, steps = 60 
    9064 shifted from previous position = 0.0589 
    9065 rotated from previous position = 0.02 degrees 
    9066 atoms outside contour = 7720, contour level = 0.41421 
    9067  
    9068 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9069 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9070 Matrix rotation and translation 
    9071 0.99809204 0.05314618 -0.03142866 226.92506609 
    9072 0.06112979 -0.77897317 0.62407043 154.50058930 
    9073 0.00868486 -0.62480097 -0.78073575 173.54464248 
    9074 Axis -0.99946416 -0.03210260 0.00638924 
    9075 Axis point 0.00000000 104.32366727 61.68058321 
    9076 Rotation angle (degrees) 141.33465630 
    9077 Shift along axis -230.65452346 
    9078  
    9079 
    9080 > fitmap #13 inMap #10
    9081 
    9082 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9083 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9084 average map value = 0.5316, steps = 44 
    9085 shifted from previous position = 0.0421 
    9086 rotated from previous position = 0.00722 degrees 
    9087 atoms outside contour = 7720, contour level = 0.41421 
    9088  
    9089 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9090 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9091 Matrix rotation and translation 
    9092 0.99808925 0.05314132 -0.03152526 226.88913302 
    9093 0.06118705 -0.77902056 0.62400566 154.49328573 
    9094 0.00860164 -0.62474229 -0.78078363 173.56389430 
    9095 Axis -0.99946339 -0.03211647 0.00643958 
    9096 Axis point 0.00000000 104.32054916 61.70063237 
    9097 Rotation angle (degrees) 141.33915254 
    9098 Shift along axis -230.61148172 
    9099  
    9100 
    9101 > fitmap #13 inMap #10
    9102 
    9103 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9104 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9105 average map value = 0.5316, steps = 48 
    9106 shifted from previous position = 0.01 
    9107 rotated from previous position = 0.0117 degrees 
    9108 atoms outside contour = 7719, contour level = 0.41421 
    9109  
    9110 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9111 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9112 Matrix rotation and translation 
    9113 0.99809319 0.05313892 -0.03140430 226.87953353 
    9114 0.06110817 -0.77892148 0.62413706 154.48967257 
    9115 0.00870447 -0.62486603 -0.78068347 173.56581359 
    9116 Axis -0.99946446 -0.03209543 0.00637707 
    9117 Axis point 0.00000000 104.32705631 61.68754621 
    9118 Rotation angle (degrees) 141.32983583 
    9119 Shift along axis -230.60960236 
    9120  
    9121 
    9122 > fitmap #13 inMap #10
    9123 
    9124 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9125 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9126 average map value = 0.5316, steps = 60 
    9127 shifted from previous position = 0.0514 
    9128 rotated from previous position = 0.00444 degrees 
    9129 atoms outside contour = 7719, contour level = 0.41421 
    9130  
    9131 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9132 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9133 Matrix rotation and translation 
    9134 0.99809102 0.05316777 -0.03142441 226.92508324 
    9135 0.06114385 -0.77896275 0.62408206 154.50191727 
    9136 0.00870259 -0.62481212 -0.78072663 173.54507401 
    9137 Axis -0.99946387 -0.03211280 0.00638310 
    9138 Axis point 0.00000000 104.32374083 61.67967658 
    9139 Rotation angle (degrees) 141.33380686 
    9140 Shift along axis -230.65715518 
    9141  
    9142 
    9143 > fitmap #13 inMap #10
    9144 
    9145 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    9146 cryosparc_P12_J2768_004_volume_map.mrc (#10) using 10778 atoms 
    9147 average map value = 0.5316, steps = 44 
    9148 shifted from previous position = 0.0444 
    9149 rotated from previous position = 0.00252 degrees 
    9150 atoms outside contour = 7719, contour level = 0.41421 
    9151  
    9152 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    9153 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9154 Matrix rotation and translation 
    9155 0.99809113 0.05314789 -0.03145469 226.88634935 
    9156 0.06114704 -0.77894693 0.62410150 154.49314949 
    9157 0.00866813 -0.62483354 -0.78070987 173.56358592 
    9158 Axis -0.99946389 -0.03210840 0.00640135 
    9159 Axis point 0.00000000 104.32570361 61.69091857 
    9160 Rotation angle (degrees) 141.33230777 
    9161 Shift along axis -230.61420157 
    9162  
    9163 
    9164 > select subtract #13
    9165 
    9166 Nothing selected 
    9167 
    9168 > movie record
    9169 
    9170 > turn y 2 180
    9171 
    9172 > wait 180
    9173 
    9174 > movie encode /Users/francescappadoo/Desktop/movie8.mp4
    9175 
    9176 Movie saved to /Users/francescappadoo/Desktop/movie8.mp4 
    9177  
    9178 
    9179 > scalebar off
    9180 
    9181 > scalebar 50
    9182 
    9183 > movie record
    9184 
    9185 > turn y 2 180
    9186 
    9187 > wait 180
    9188 
    9189 > movie encode /Users/francescappadoo/Desktop/movie9.mp4
    9190 
    9191 Movie saved to /Users/francescappadoo/Desktop/movie9.mp4 
    9192  
    9193 
    9194 > color zone #10 near #13 distance 17.8
    9195 
    9196 [Repeated 1 time(s)]
    9197 
    9198 > undo
    9199 
    9200 [Repeated 1 time(s)]
    9201 
    9202 > select #13:63-68
    9203 
    9204 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9205 
    9206 > color zone #10 near sel & #13 distance 17.8
    9207 
    9208 > save /Users/francescappadoo/Desktop/image23.png supersample 3
    9209 
    9210 > select add #13
    9211 
    9212 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    9213 
    9214 > select subtract #13
    9215 
    9216 Nothing selected 
    9217 
    9218 > hide #13 models
    9219 
    9220 > hide #!10 models
    9221 
    9222 > show #!3 models
    9223 
    9224 > select #13:63-68
    9225 
    9226 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9227 
    9228 > tile
    9229 
    9230 2 models tiled 
    9231 
    9232 > scalebar off
    9233 
    9234 > scalebar 50
    9235 
    9236 > save /Users/francescappadoo/Desktop/image24.png supersample 3
    9237 
    9238 > select add #3
    9239 
    9240 189 atoms, 203 bonds, 6 residues, 3 models selected 
    9241 
    9242 > ui mousemode right "rotate selected models"
    9243 
    9244 > view matrix models
    9245 > #3,-0.56057,-0.80442,-0.19663,578.32,0.819,-0.50344,-0.27528,141.4,0.12244,-0.31536,0.94104,-110.41,#13,-0.80071,0.52163,-0.29457,319.82,0.59886,0.70956,-0.37133,197.57,0.015322,-0.47374,-0.88053,103.52
    9246 
    9247 > movie record
    9248 
    9249 > turn y 2 180
    9250 
    9251 > wait 180
    9252 
    9253 > movie encode /Users/francescappadoo/Desktop/movie10.mp4
    9254 
    9255 Movie saved to /Users/francescappadoo/Desktop/movie10.mp4 
    9256  
    9257 
    9258 > select subtract #3
    9259 
    9260 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9261 
    9262 > movie record
    9263 
    9264 > turn y 2 180
    9265 
    9266 > wait 180
    9267 
    9268 > movie encode /Users/francescappadoo/Desktop/movie11.mp4
    9269 
    9270 Movie saved to /Users/francescappadoo/Desktop/movie11.mp4 
    9271  
    9272 
    9273 > hide #!3 models
    9274 
    9275 > show #13 models
    9276 
    9277 > show #!10 models
    9278 
    9279 > scalebar off
    9280 
    9281 > scalebar 50
    9282 
    9283 > fitmap #13 inMap #10 resolution 15
    9284 
    9285 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9286 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    9287 correlation = 0.0005328, correlation about mean = 0.1663, overlap = 0.001634 
    9288 steps = 444, shift = 82.5, angle = 34.2 degrees 
    9289  
    9290 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9291 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9292 Matrix rotation and translation 
    9293 0.82241635 -0.42277162 -0.38065139 218.98359820 
    9294 -0.54572666 -0.77527728 -0.31800556 339.97441475 
    9295 -0.16066669 0.46926457 -0.86831848 203.08092798 
    9296 Axis 0.95239329 -0.26612460 -0.14874380 
    9297 Axis point 0.00000000 176.03381719 159.90762334 
    9298 Rotation angle (degrees) 155.58697339 
    9299 Shift along axis 87.87592397 
    9300  
    9301 Average map value = 0.0007994 for 4505 atoms, 10778 outside contour 
    9302 
    9303 > tile
    9304 
    9305 3 models tiled 
    9306 
    9307 > fitmap #13 inMap #10 resolution 15
    9308 
    9309 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9310 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    9311 correlation = 0, correlation about mean = 0, overlap = 0 
    9312 steps = 36, shift = 7.38, angle = 4.04 degrees 
    9313  
    9314 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9315 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9316 Matrix rotation and translation 
    9317 0.81601249 -0.41696168 -0.40033304 240.74576082 
    9318 -0.56071851 -0.73924084 -0.37298487 50.25426442 
    9319 -0.14042218 0.52883445 -0.83702792 10.50519017 
    9320 Axis 0.94981103 -0.27374242 -0.15140707 
    9321 Axis point 0.00000000 54.13003826 38.88265673 
    9322 Rotation angle (degrees) 151.65782531 
    9323 Shift along axis 213.31569391 
    9324  
    9325 Average map value = 0 for 2918 atoms, 10778 outside contour 
    9326 
    9327 > fitmap #13 inMap #10 resolution 15
    9328 
    9329 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9330 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    9331 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    9332 steps = 48, shift = 0.00682, angle = 0.015 degrees 
    9333  
    9334 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9335 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9336 Matrix rotation and translation 
    9337 0.99568093 0.08729982 -0.03159396 228.14106749 
    9338 0.08778112 -0.77442046 0.62655198 155.40233163 
    9339 0.03023086 -0.62661926 -0.77873896 174.29015706 
    9340 Axis -0.99878519 -0.04927476 0.00038360 
    9341 Axis point 0.00000000 102.86226439 61.79940038 
    9342 Rotation angle (degrees) 141.14528690 
    9343 Shift along axis -235.45447350 
    9344  
    9345 Average map value = 0.5298 for 10778 atoms, 7667 outside contour 
    9346 
    9347 > fitmap #13 inMap #10 resolution 15
    9348 
    9349 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9350 cryosparc_P12_J2768_004_volume_map.mrc using 2552 points 
    9351 correlation = 0.4552, correlation about mean = 0.2031, overlap = 208 
    9352 steps = 36, shift = 0.0265, angle = 0.0239 degrees 
    9353  
    9354 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9355 cryosparc_P12_J2768_004_volume_map.mrc (#10) coordinates: 
    9356 Matrix rotation and translation 
    9357 0.99570207 0.08696973 -0.03183695 228.10989924 
    9358 0.08767857 -0.77447649 0.62649708 155.39971989 
    9359 0.02982930 -0.62659591 -0.77877324 174.29409621 
    9360 Axis -0.99879116 -0.04915175 0.00056499 
    9361 Axis point 0.00000000 102.88114581 61.81910769 
    9362 Rotation angle (degrees) 141.14844529 
    9363 Shift along axis -235.37384534 
    9364  
    9365 Average map value = 0.5299 for 10778 atoms, 7668 outside contour 
    9366 
    9367 > undo
    9368 
    9369 [Repeated 9 time(s)]
    9370 
    9371 > show #!10 models
    9372 
    9373 > hide #!10 models
    9374 
    9375 > show #!10 models
    9376 
    9377 > hide #!3 models
    9378 
    9379 Color zone shortcut requires 1 displayed atomic model and 1 map, got 0 atomic
    9380 models, 1 maps. 
    9381 
    9382 [Repeated 1 time(s)]
    9383 
    9384 > show #13 models
    9385 
    9386 > select add #13
    9387 
    9388 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    9389 
    9390 > select subtract #13
    9391 
    9392 Nothing selected 
    9393 
    9394 > color zone #10 near #13 distance 17.8
    9395 
    9396 [Repeated 1 time(s)]
    9397 
    9398 > undo
    9399 
    9400 [Repeated 5 time(s)]
    9401 
    9402 > show #13 models
    9403 
    9404 > close #10
    9405 
    9406 > hide #!3 models
    9407 
    9408 > open
    9409 > /Users/francescappadoo/Downloads/rnacomposer-2024-07-03-103043/Kendall_Fran_SHAPE_MaP_fit_h3.pdb
    9410 
    9411 Chain information for Kendall_Fran_SHAPE_MaP_fit_h3.pdb #10 
    9412 --- 
    9413 Chain | Description 
    9414 A | No description available 
    9415  
    9416 
    9417 > tile
    9418 
    9419 3 models tiled 
    9420 
    9421 > close #10
    9422 
    9423 > tile
    9424 
    9425 2 models tiled 
    9426 
    9427 > select #13:79-81
    9428 
    9429 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9430 
    9431 > select #13:77-79
    9432 
    9433 97 atoms, 104 bonds, 3 residues, 1 model selected 
    9434 
    9435 > color sel red
    9436 
    9437 > select up
    9438 
    9439 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    9440 
    9441 > select up
    9442 
    9443 40785 atoms, 43984 bonds, 1272 residues, 28 models selected 
    9444 
    9445 > select up
    9446 
    9447 40785 atoms, 43984 bonds, 1272 residues, 28 models selected 
    9448 
    9449 > select down
    9450 
    9451 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    9452 
    9453 > select down
    9454 
    9455 97 atoms, 104 bonds, 3 residues, 1 model selected 
    9456 
    9457 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2768_004_volume_map.mrc
    9458 
    9459 Opened cryosparc_P12_J2768_004_volume_map.mrc as #10, grid size 128,128,128,
    9460 pixel 2.96, shown at level 0.0253, step 1, values float32 
    9461 
    9462 > select #13:79-81
    9463 
    9464 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9465 
    9466 > tile
    9467 
    9468 3 models tiled 
    9469 
    9470 > surface dust #10 size 29.6
    9471 
    9472 > close #10
    9473 
    9474 > tile
    9475 
    9476 2 models tiled 
    9477 
    9478 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2769_004_volume_map.mrc
    9479 
    9480 Opened cryosparc_P12_J2769_004_volume_map.mrc as #10, grid size 128,128,128,
    9481 pixel 2.96, shown at level 0.0593, step 1, values float32 
    9482 
    9483 > tile
    9484 
    9485 3 models tiled 
    9486 
    9487 > surface dust #10 size 29.6
    9488 
    9489 > volume #10 level 0.5111
    9490 
    9491 > tile
    9492 
    9493 3 models tiled 
    9494 
    9495 > volume #10 level 0.3981
    9496 
    9497 > surface dust #10 size 29.6
    9498 
    9499 > transparency #10.1 50
    9500 
    9501 > color #10 #fffb00ff models
    9502 
    9503 > color #10 #fffc79ff models
    9504 
    9505 > color #10 #ffd479ff models
    9506 
    9507 > color #10 #fffc79ff models
    9508 
    9509 > color #10 #fffb00ff models
    9510 
    9511 > color #10 #fdfe9cff models
    9512 
    9513 > transparency #10.1 50
    9514 
    9515 > tile
    9516 
    9517 3 models tiled 
    9518 
    9519 > fitmap #13 inMap
    9520 
    9521 Missing "inMap" keyword's argument 
    9522 
    9523 > fitmap #13 inMap #10 resolution 15 search 200
    9524 
    9525 Found 109 unique fits from 200 random placements having fraction of points
    9526 inside contour >= 0.100 (199 of 200). 
    9527  
    9528 Correlations and times found: 
    9529 0.491 (5), 0.4793 (4), 0.4761 (5), 0.4757 (5), 0.4672 (3), 0.4668 (5), 0.4652
    9530 (10), 0.4641 (5), 0.4635 (3), 0.463 (2), 0.462 (5), 0.4592 (1), 0.4579 (3),
    9531 0.4542 (2), 0.4521 (1), 0.4505 (2), 0.4505 (2), 0.4499 (6), 0.4491 (4), 0.4484
    9532 (2), 0.4458 (1), 0.4438 (2), 0.4415 (5), 0.4406 (3), 0.4395 (1), 0.4394 (3),
    9533 0.439 (1), 0.4388 (1), 0.4385 (2), 0.4381 (2), 0.4374 (2), 0.436 (1), 0.4348
    9534 (1), 0.4335 (1), 0.4333 (2), 0.4329 (1), 0.432 (1), 0.4289 (1), 0.4271 (1),
    9535 0.4264 (2), 0.4254 (1), 0.4246 (1), 0.4243 (2), 0.4238 (3), 0.4233 (1), 0.4227
    9536 (3), 0.4226 (2), 0.4221 (3), 0.4218 (1), 0.4216 (1), 0.4216 (1), 0.4199 (1),
    9537 0.4188 (1), 0.4173 (1), 0.4142 (1), 0.4136 (2), 0.4135 (2), 0.413 (1), 0.4124
    9538 (1), 0.4122 (1), 0.4122 (1), 0.4119 (1), 0.4118 (1), 0.4109 (1), 0.4108 (1),
    9539 0.4096 (1), 0.4083 (1), 0.4066 (3), 0.4052 (1), 0.4043 (2), 0.4031 (3), 0.4029
    9540 (1), 0.4018 (1), 0.4009 (1), 0.3989 (1), 0.3979 (1), 0.3975 (1), 0.3967 (1),
    9541 0.3965 (1), 0.3946 (1), 0.3945 (1), 0.3915 (2), 0.391 (1), 0.3905 (1), 0.3901
    9542 (1), 0.3889 (1), 0.3869 (1), 0.3859 (1), 0.3841 (1), 0.383 (1), 0.3824 (3),
    9543 0.3824 (1), 0.3794 (1), 0.3759 (1), 0.3755 (3), 0.3745 (1), 0.3744 (1), 0.3703
    9544 (1), 0.3677 (2), 0.3676 (1), 0.3625 (1), 0.3588 (1), 0.3584 (1), 0.3558 (1),
    9545 0.3534 (1), 0.3454 (1), 0.3287 (1), 0.3284 (1), 0.3129 (1) 
    9546  
    9547 Best fit found: 
    9548 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9549 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9550 correlation = 0.491, correlation about mean = 0.2303, overlap = 225.2 
    9551 steps = 160, shift = 26.4, angle = 32.7 degrees 
    9552 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9553 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9554 Matrix rotation and translation 
    9555 0.42771306 0.04102041 0.90298321 186.23525627 
    9556 0.67763140 -0.67568866 -0.29027644 174.41118311 
    9557 0.59822835 0.73604485 -0.31679759 231.81335998 
    9558 Axis 0.82396662 0.24466787 0.51109357 
    9559 Axis point 0.00000000 44.49638620 78.80728730 
    9560 Rotation angle (degrees) 141.47961564 
    9561 Shift along axis 314.60276527 
    9562  
    9563 Found 109 fits. 
    9564 
    9565 > fitmap #13 inMap #10 resolution 15
    9566 
    9567 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9568 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9569 correlation = 0.4592, correlation about mean = 0.2024, overlap = 206.3 
    9570 steps = 96, shift = 23.1, angle = 0.00486 degrees 
    9571  
    9572 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9573 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9574 Matrix rotation and translation 
    9575 0.99904479 0.04316920 -0.00676603 226.04598368 
    9576 0.03809490 -0.78462571 0.61879818 152.96613221 
    9577 0.02140427 -0.61846493 -0.78552078 174.07441971 
    9578 Axis -0.99973250 -0.02276214 -0.00410014 
    9579 Axis point 0.00000000 103.91767221 60.96888229 
    9580 Rotation angle (degrees) 141.77165500 
    9581 Shift along axis -230.18108263 
    9582  
    9583 Average map value = 0.521 for 10778 atoms, 7681 outside contour 
    9584 
    9585 > fitmap #13 inMap #10 resolution 15 metric correlation
    9586 
    9587 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9588 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9589 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9590 steps = 48, shift = 0.404, angle = 0.577 degrees 
    9591  
    9592 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9593 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9594 Matrix rotation and translation 
    9595 0.99934290 0.03624081 0.00048697 225.67300367 
    9596 0.02814780 -0.78450087 0.61948849 152.29686433 
    9597 0.02283283 -0.61906779 -0.78500550 174.12614665 
    9598 Axis -0.99981595 -0.01803854 -0.00653302 
    9599 Axis point 0.00000000 104.06738991 60.61714618 
    9600 Rotation angle (degrees) 141.72824009 
    9601 Shift along axis -229.51625138 
    9602  
    9603 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    9604 
    9605 > fitmap #13 inMap #10 resolution 15 metric correlation
    9606 
    9607 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9608 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9609 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    9610 steps = 44, shift = 0.0647, angle = 0.0461 degrees 
    9611  
    9612 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9613 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9614 Matrix rotation and translation 
    9615 0.99934148 0.03628114 0.00037245 225.73545521 
    9616 0.02823227 -0.78400498 0.62011212 152.30195039 
    9617 0.02279042 -0.61969332 -0.78451303 174.07296819 
    9618 Axis -0.99981550 -0.01807851 -0.00649085 
    9619 Axis point 0.00000000 104.09575962 60.56294645 
    9620 Rotation angle (degrees) 141.68261498 
    9621 Shift along axis -229.57708135 
    9622  
    9623 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    9624 
    9625 > fitmap #13 inMap #10 resolution 15 metric correlation
    9626 
    9627 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9628 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9629 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9630 steps = 36, shift = 0.0494, angle = 0.0452 degrees 
    9631  
    9632 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9633 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9634 Matrix rotation and translation 
    9635 0.99933944 0.03633389 0.00062371 225.68837182 
    9636 0.02813510 -0.78447092 0.61952700 152.29294338 
    9637 0.02299915 -0.61910029 -0.78497502 174.12319939 
    9638 Axis -0.99981498 -0.01806137 -0.00661803 
    9639 Axis point 0.00000000 104.06103033 60.60578687 
    9640 Rotation angle (degrees) 141.72560500 
    9641 Shift along axis -229.54958608 
    9642  
    9643 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    9644 
    9645 > select #13:79-81
    9646 
    9647 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9648 
    9649 > color zone #10 near sel & #13 distance 17.8
    9650 
    9651 [Repeated 1 time(s)]
    9652 
    9653 > undo
    9654 
    9655 [Repeated 1 time(s)]
    9656 
    9657 > select #13:79-81
    9658 
    9659 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9660 
    9661 > fitmap #13 inMap #10 resolution 15 metric correlation
    9662 
    9663 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9664 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9665 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9666 steps = 92, shift = 19.2, angle = 0.00551 degrees 
    9667  
    9668 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9669 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9670 Matrix rotation and translation 
    9671 0.99934082 0.03629723 0.00054933 225.67550212 
    9672 0.02815349 -0.78450050 0.61948870 152.29683440 
    9673 0.02291671 -0.61906495 -0.78500530 174.12797619 
    9674 Axis -0.99981537 -0.01805595 -0.00657399 
    9675 Axis point 0.00000000 104.06401785 60.61420040 
    9676 Rotation angle (degrees) 141.72830964 
    9677 Shift along axis -229.52841360 
    9678  
    9679 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    9680 
    9681 > select #13:79-81
    9682 
    9683 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9684 
    9685 > color zone #10 near sel & #13 distance 17.8
    9686 
    9687 [Repeated 1 time(s)]
    9688 
    9689 > undo
    9690 
    9691 [Repeated 1 time(s)]
    9692 
    9693 > color sel magenta
    9694 
    9695 > color zone #10 near sel & #13 distance 17.8
    9696 
    9697 > scalebar off
    9698 
    9699 > scalebar 50
    9700 
    9701 > select up
    9702 
    9703 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    9704 
    9705 > select down
    9706 
    9707 101 atoms, 109 bonds, 3 residues, 1 model selected 
    9708 
    9709 > select #13:77-79
    9710 
    9711 97 atoms, 104 bonds, 3 residues, 1 model selected 
    9712 
    9713 > color sel magenta
    9714 
    9715 > color zone #10 near sel & #13 distance 17.8
    9716 
    9717 > select #13:63-68
    9718 
    9719 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9720 
    9721 > color sel lime
    9722 
    9723 > color zone #10 near sel & #13 distance 17.8
    9724 
    9725 > undo
    9726 
    9727 [Repeated 3 time(s)]
    9728 
    9729 > color zone #10 near sel & #13 distance 17.8
    9730 
    9731 > scalebar off
    9732 
    9733 > scalebar 50
    9734 
    9735 > fitmap #13 inMap #10 resolution 15 metric correlation
    9736 
    9737 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9738 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9739 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9740 steps = 48, shift = 0.878, angle = 0.0129 degrees 
    9741  
    9742 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9743 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9744 Matrix rotation and translation 
    9745 0.99933961 0.03633206 0.00044301 225.68025355 
    9746 0.02824218 -0.78437615 0.61964212 152.30328112 
    9747 0.02286040 -0.61922047 -0.78488428 174.12118465 
    9748 Axis -0.99981501 -0.01809179 -0.00652888 
    9749 Axis point 0.00000000 104.07330914 60.60800796 
    9750 Rotation angle (degrees) 141.71701797 
    9751 Shift along axis -229.53076058 
    9752  
    9753 Average map value = 0.5204 for 10778 atoms, 7668 outside contour 
    9754 
    9755 > save /Users/francescappadoo/Desktop/image25.png supersample 3
    9756 
    9757 > undo
    9758 
    9759 > save /Users/francescappadoo/Desktop/image26.png supersample 3
    9760 
    9761 > fitmap #13 inMap #10 resolution 15 metric correlation
    9762 
    9763 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9764 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9765 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9766 steps = 60, shift = 4.5, angle = 0.00524 degrees 
    9767  
    9768 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9769 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9770 Matrix rotation and translation 
    9771 0.99934286 0.03624274 0.00042546 225.68550234 
    9772 0.02818276 -0.78437344 0.61964824 152.29999484 
    9773 0.02279151 -0.61922913 -0.78487945 174.11304635 
    9774 Axis -0.99981592 -0.01805016 -0.00650467 
    9775 Axis point 0.00000000 104.07627066 60.60521149 
    9776 Rotation angle (degrees) 141.71651924 
    9777 Shift along axis -229.52554611 
    9778  
    9779 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    9780 
    9781 > scalebar off
    9782 
    9783 > scalebar 50
    9784 
    9785 > scalebar off
    9786 
    9787 > scalebar 50
    9788 
    9789 > scalebar off
    9790 
    9791 > scalebar 50
    9792 
    9793 > scalebar off
    9794 
    9795 > scalebar 50
    9796 
    9797 > fitmap #13 inMap #10 resolution 15 metric correlation
    9798 
    9799 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9800 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9801 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9802 steps = 60, shift = 1.39, angle = 0.00721 degrees 
    9803  
    9804 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9805 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9806 Matrix rotation and translation 
    9807 0.99934110 0.03629063 0.00047606 225.67443104 
    9808 0.02819142 -0.78443814 0.61956594 152.30090562 
    9809 0.02285792 -0.61914436 -0.78494439 174.12406972 
    9810 Axis -0.99981544 -0.01806534 -0.00653722 
    9811 Axis point 0.00000000 104.07061698 60.61191236 
    9812 Rotation angle (degrees) 141.72259557 
    9813 Shift along axis -229.52243515 
    9814  
    9815 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    9816 
    9817 > fitmap #13 inMap #10 resolution 15 metric correlation
    9818 
    9819 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9820 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9821 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9822 steps = 40, shift = 0.0102, angle = 0.00775 degrees 
    9823  
    9824 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9825 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9826 Matrix rotation and translation 
    9827 0.99933905 0.03634653 0.00049904 225.66684600 
    9828 0.02822384 -0.78451195 0.61947101 152.30243902 
    9829 0.02290716 -0.61904756 -0.78501930 174.13342644 
    9830 Axis -0.99981487 -0.01808934 -0.00655718 
    9831 Axis point 0.00000000 104.06370417 60.62008691 
    9832 Rotation angle (degrees) 141.72956815 
    9833 Shift along axis -229.52194292 
    9834  
    9835 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    9836 
    9837 > select #13:63-68
    9838 
    9839 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9840 
    9841 > color sel cyan
    9842 
    9843 > color sel #f4ffb9ff
    9844 
    9845 > color sel #f7ff9bff
    9846 
    9847 > color sel #e9ff7eff
    9848 
    9849 > color sel #e3ff23ff
    9850 
    9851 > color sel #c3ff00ff
    9852 
    9853 > color sel #7dff09ff
    9854 
    9855 > color sel #00ff08ff
    9856 
    9857 > color sel #00ff4bff
    9858 
    9859 > color sel #00ff61ff
    9860 
    9861 > color sel #00ff60ff
    9862 
    9863 > scalebar off
    9864 
    9865 > scalebar 50
    9866 
    9867 > fitmap #13 inMap #10 resolution 15 metric correlation
    9868 
    9869 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9870 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9871 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9872 steps = 56, shift = 3.2, angle = 0.0273 degrees 
    9873  
    9874 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9875 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9876 Matrix rotation and translation 
    9877 0.99934129 0.03628662 0.00034942 225.68990167 
    9878 0.02825921 -0.78423236 0.61982331 152.30760468 
    9879 0.02276537 -0.61940522 -0.78474124 174.10403665 
    9880 Axis -0.99981547 -0.01808529 -0.00647655 
    9881 Axis point 0.00000000 104.08647300 60.59464539 
    9882 Rotation angle (degrees) 141.70367925 
    9883 Shift along axis -229.53037605 
    9884  
    9885 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    9886 
    9887 > fitmap #13 inMap #10 resolution 15 metric correlation
    9888 
    9889 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9890 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9891 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    9892 steps = 44, shift = 0.0492, angle = 0.0212 degrees 
    9893  
    9894 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9895 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9896 Matrix rotation and translation 
    9897 0.99934119 0.03628929 0.00037110 225.73454927 
    9898 0.02823947 -0.78400397 0.62011307 152.30291533 
    9899 0.02279445 -0.61969412 -0.78451228 174.07351530 
    9900 Axis -0.99981542 -0.01808282 -0.00649161 
    9901 Axis point 0.00000000 104.09588814 60.56309010 
    9902 Rotation angle (degrees) 141.68254723 
    9903 Shift along axis -229.57696623 
    9904  
    9905 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    9906 
    9907 > fitmap #13 inMap #10 resolution 15 metric correlation
    9908 
    9909 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9910 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9911 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9912 steps = 40, shift = 0.0676, angle = 0.0537 degrees 
    9913  
    9914 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9915 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9916 Matrix rotation and translation 
    9917 0.99934290 0.03624029 0.00052400 225.66846686 
    9918 0.02812737 -0.78458019 0.61938896 152.29407289 
    9919 0.02285799 -0.61896730 -0.78508401 174.13288836 
    9920 Axis -0.99981596 -0.01803187 -0.00655015 
    9921 Axis point 0.00000000 104.06111608 60.62409769 
    9922 Rotation angle (degrees) 141.73554035 
    9923 Shift along axis -229.51367856 
    9924  
    9925 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    9926 
    9927 > fitmap #13 inMap #10 resolution 15 metric correlation
    9928 
    9929 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    9930 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    9931 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    9932 steps = 40, shift = 0.00646, angle = 0.00718 degrees 
    9933  
    9934 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    9935 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    9936 Matrix rotation and translation 
    9937 0.99933951 0.03633364 0.00052138 225.66689552 
    9938 0.02820037 -0.78452581 0.61945452 152.30054756 
    9939 0.02291611 -0.61903074 -0.78503229 174.13420806 
    9940 Axis -0.99981500 -0.01807901 -0.00656589 
    9941 Axis point 0.00000000 104.06267725 60.62029897 
    9942 Rotation angle (degrees) 141.73078933 
    9943 Shift along axis -229.52193796 
    9944  
    9945 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    9946 
    9947 > save /Users/francescappadoo/Desktop/image27.png supersample 3
    9948 
    9949 > select #13:63-68
    9950 
    9951 189 atoms, 203 bonds, 6 residues, 1 model selected 
    9952 
    9953 > color sel orange
    9954 
    9955 > hide #13 models
    9956 
    9957 > movie record
    9958 
    9959 > turn y 2 180
    9960 
    9961 > wait 180
    9962 
    9963 > movie encode /Users/francescappadoo/Desktop/movie12.mp4
    9964 
    9965 Movie saved to /Users/francescappadoo/Desktop/movie12.mp4 
    9966  
    9967 
    9968 > hide #!10 models
    9969 
    9970 > show #!3 models
    9971 
    9972 > scalebar off
    9973 
    9974 > scalebar 50
    9975 
    9976 > movie record
    9977 
    9978 > turn y 2 180
    9979 
    9980 > wait 180
    9981 
    9982 > movie encode /Users/francescappadoo/Desktop/movie13.mp4
    9983 
    9984 Movie saved to /Users/francescappadoo/Desktop/movie13.mp4 
    9985  
    9986 
    9987 > show #!10 models
    9988 
    9989 > tile
    9990 
    9991 3 models tiled 
    9992 
    9993 > select add #10
    9994 
    9995 189 atoms, 203 bonds, 6 residues, 3 models selected 
    9996 
    9997 > view matrix models
    9998 > #13,-0.45442,-0.88681,0.084049,170.41,0.57936,-0.22256,0.78409,-18.346,-0.67664,0.405,0.61492,-229.18,#10,-0.4863,0.73498,0.47257,31.612,0.5713,0.67666,-0.46449,-60.226,-0.66116,0.044101,-0.74895,216.34
    9999 
    10000 > view matrix models
    10001 > #13,-0.58107,-0.70277,0.41045,90.669,0.79504,-0.59798,0.10167,144.87,0.17399,0.3854,0.9062,-231.54,#10,-0.60601,0.78921,0.099508,117.61,0.77284,0.55453,0.30857,-227.69,0.18835,0.2639,-0.94598,51.268
    10002 
    10003 > select subtract #10
    10004 
    10005 189 atoms, 203 bonds, 6 residues, 1 model selected 
    10006 
    10007 > select add #10
    10008 
    10009 189 atoms, 203 bonds, 6 residues, 3 models selected 
    10010 
    10011 > ui mousemode right "translate selected models"
    10012 
    10013 > view matrix models
    10014 > #13,-0.58107,-0.70277,0.41045,190.1,0.79504,-0.59798,0.10167,193.22,0.17399,0.3854,0.9062,-139.99,#10,-0.60601,0.78921,0.099508,217.04,0.77284,0.55453,0.30857,-179.34,0.18835,0.2639,-0.94598,142.82
    10015 
    10016 > fitmap #10 inMap #3
    10017 
    10018 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10019 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10020 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10021 steps = 72, shift = 8.38, angle = 16.9 degrees 
    10022  
    10023 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10024 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10025 Matrix rotation and translation 
    10026 0.99754650 -0.05891673 -0.03781178 17.10569699 
    10027 0.04862661 0.97169289 -0.23118896 40.23935708 
    10028 0.05036233 0.22878308 0.97217379 -54.08942390 
    10029 Axis 0.95720688 -0.18349129 0.22379886 
    10030 Axis point 0.00000000 250.51338671 140.90842104 
    10031 Rotation angle (degrees) 13.90234875 
    10032 Shift along axis -3.11503189 
    10033  
    10034 
    10035 > fitmap #10 inMap #3
    10036 
    10037 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10038 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10039 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10040 steps = 60, shift = 13.1, angle = 0.0643 degrees 
    10041  
    10042 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10043 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10044 Matrix rotation and translation 
    10045 0.99762035 -0.05819987 -0.03696405 16.85215219 
    10046 0.04813073 0.97175517 -0.23103089 40.28308393 
    10047 0.04936597 0.22870201 0.97224397 -53.90007579 
    10048 Axis 0.95837312 -0.17996616 0.22165999 
    10049 Axis point 0.00000000 249.89099617 141.43868794 
    10050 Rotation angle (degrees) 13.87772852 
    10051 Shift along axis -3.04643256 
    10052  
    10053 
    10054 > fitmap #10 inMap #3
    10055 
    10056 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10057 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10058 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10059 steps = 44, shift = 0.00415, angle = 0.00974 degrees 
    10060  
    10061 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10062 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10063 Matrix rotation and translation 
    10064 0.99760935 -0.05833038 -0.03705523 16.90051369 
    10065 0.04823386 0.97173557 -0.23109181 40.27876223 
    10066 0.04948755 0.22875204 0.97222602 -53.93012691 
    10067 Axis 0.95821192 -0.18033583 0.22205608 
    10068 Axis point 0.00000000 249.96408034 141.34885480 
    10069 Rotation angle (degrees) 13.88352672 
    10070 Shift along axis -3.04494328 
    10071  
    10072 
    10073 > fitmap #10 inMap #3
    10074 
    10075 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10076 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10077 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10078 steps = 56, shift = 1.77, angle = 0.0366 degrees 
    10079  
    10080 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10081 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10082 Matrix rotation and translation 
    10083 0.99757097 -0.05862415 -0.03762060 17.02112739 
    10084 0.04839194 0.97173462 -0.23106275 40.25037141 
    10085 0.05010309 0.22868096 0.97221121 -54.02820514 
    10086 Axis 0.95756634 -0.18271321 0.22289593 
    10087 Axis point 0.00000000 250.38870779 141.11743889 
    10088 Rotation angle (degrees) 13.88998879 
    10089 Shift along axis -3.09808285 
    10090  
    10091 
    10092 > fitmap #10 inMap #3
    10093 
    10094 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10095 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10096 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10097 steps = 40, shift = 0.00228, angle = 0.00516 degrees 
    10098  
    10099 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10100 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10101 Matrix rotation and translation 
    10102 0.99757474 -0.05861271 -0.03753838 17.00033941 
    10103 0.04839788 0.97172620 -0.23109691 40.25714738 
    10104 0.05002224 0.22871966 0.97220627 -54.01927581 
    10105 Axis 0.95764074 -0.18235883 0.22286647 
    10106 Axis point 0.00000000 250.31024207 141.12953326 
    10107 Rotation angle (degrees) 13.89113282 
    10108 Shift along axis -3.10011401 
    10109  
    10110 
    10111 > fitmap #10 inMap #3
    10112 
    10113 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10114 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10115 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10116 steps = 44, shift = 0.0071, angle = 0.00758 degrees 
    10117  
    10118 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10119 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10120 Matrix rotation and translation 
    10121 0.99756591 -0.05870570 -0.03762753 17.02972928 
    10122 0.04846645 0.97171550 -0.23112752 40.25342427 
    10123 0.05013176 0.22874127 0.97219555 -54.04211734 
    10124 Axis 0.95750561 -0.18272607 0.22314612 
    10125 Axis point 0.00000000 250.37303984 141.06383989 
    10126 Rotation angle (degrees) 13.89474226 
    10127 Shift along axis -3.10857722 
    10128  
    10129 
    10130 > fitmap #10 inMap #3
    10131 
    10132 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10133 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10134 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10135 steps = 40, shift = 0.0533, angle = 0.0522 degrees 
    10136  
    10137 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10138 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10139 Matrix rotation and translation 
    10140 0.99762424 -0.05817912 -0.03689181 16.83124820 
    10141 0.04812720 0.97175598 -0.23102823 40.28411862 
    10142 0.04929085 0.22870387 0.97224735 -53.88649375 
    10143 Axis 0.95843668 -0.17967121 0.22162444 
    10144 Axis point 0.00000000 249.82773717 141.45546820 
    10145 Rotation angle (degrees) 13.87676497 
    10146 Shift along axis -3.04877451 
    10147  
    10148 
    10149 > fitmap #10 inMap #3
    10150 
    10151 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10152 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10153 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10154 steps = 68, shift = 15.1, angle = 0.00935 degrees 
    10155  
    10156 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10157 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10158 Matrix rotation and translation 
    10159 0.99763504 -0.05805791 -0.03679049 16.79499558 
    10160 0.04803446 0.97177048 -0.23098652 40.28926127 
    10161 0.04916250 0.22867304 0.97226110 -53.85901933 
    10162 Axis 0.95860145 -0.17925148 0.22125136 
    10163 Axis point 0.00000000 249.75796724 141.54093807 
    10164 Rotation angle (degrees) 13.87209893 
    10165 Shift along axis -3.03858401 
    10166  
    10167 
    10168 > fitmap #10 inMap #3
    10169 
    10170 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10171 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10172 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10173 steps = 84, shift = 14.9, angle = 0.0607 degrees 
    10174  
    10175 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10176 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10177 Matrix rotation and translation 
    10178 0.99756621 -0.05871316 -0.03760803 17.03126741 
    10179 0.04847772 0.97171274 -0.23113678 40.25295702 
    10180 0.05011497 0.22875109 0.97219410 -54.04061297 
    10181 Axis 0.95751380 -0.18264448 0.22317776 
    10182 Axis point 0.00000000 250.35908129 141.05882998 
    10183 Rotation angle (degrees) 13.89520920 
    10184 Shift along axis -3.10496988 
    10185  
    10186 
    10187 > fitmap #10 inMap #3
    10188 
    10189 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10190 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10191 correlation = 0.8567, correlation about mean = 0.5776, overlap = 3558 
    10192 steps = 60, shift = 8.39, angle = 0.0279 degrees 
    10193  
    10194 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10195 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10196 Matrix rotation and translation 
    10197 0.99759865 -0.05834172 -0.03732442 16.89618169 
    10198 0.04818808 0.97176047 -0.23099666 40.27366138 
    10199 0.04974714 0.22864336 0.97223833 -53.95848659 
    10200 Axis 0.95800134 -0.18147826 0.22203394 
    10201 Axis point 0.00000000 250.14105589 141.32975362 
    10202 Rotation angle (degrees) 13.88036104 
    10203 Shift along axis -3.10284480 
    10204  
    10205 
    10206 > fitmap #10 inMap #3
    10207 
    10208 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10209 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10210 correlation = 0.8568, correlation about mean = 0.5781, overlap = 3558 
    10211 steps = 68, shift = 12.2, angle = 0.0269 degrees 
    10212  
    10213 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10214 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10215 Matrix rotation and translation 
    10216 0.99760788 -0.05845259 -0.03690185 16.88932889 
    10217 0.04838391 0.97170872 -0.23117335 40.27447034 
    10218 0.04937053 0.22883490 0.97221247 -53.91984614 
    10219 Axis 0.95821629 -0.17970897 0.22254487 
    10220 Axis point 0.00000000 249.81264920 141.27142853 
    10221 Rotation angle (degrees) 13.88852501 
    10222 Shift along axis -3.05363860 
    10223  
    10224 
    10225 > fitmap #10 inMap #3
    10226 
    10227 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10228 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10229 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10230 steps = 56, shift = 11.6, angle = 0.0197 degrees 
    10231  
    10232 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10233 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10234 Matrix rotation and translation 
    10235 0.99759306 -0.05849224 -0.03723824 16.95991802 
    10236 0.04834821 0.97172350 -0.23111866 40.26346278 
    10237 0.04970392 0.22876197 0.97221265 -53.96915476 
    10238 Axis 0.95795157 -0.18110436 0.22255336 
    10239 Axis point 0.00000000 250.09868372 141.21783061 
    10240 Rotation angle (degrees) 13.88850860 
    10241 Shift along axis -3.05612548 
    10242  
    10243 
    10244 > fitmap #10 inMap #3
    10245 
    10246 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10247 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10248 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10249 steps = 64, shift = 11.5, angle = 0.0358 degrees 
    10250  
    10251 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10252 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10253 Matrix rotation and translation 
    10254 0.99763403 -0.05807447 -0.03679185 16.80093953 
    10255 0.04805017 0.97176923 -0.23098853 40.28552330 
    10256 0.04916772 0.22867416 0.97226057 -53.85878549 
    10257 Axis 0.95858535 -0.17926098 0.22131342 
    10258 Axis point 0.00000000 249.75553465 141.52422145 
    10259 Rotation angle (degrees) 13.87243317 
    10260 Shift along axis -3.03615974 
    10261  
    10262 
    10263 > fitmap #10 inMap #3
    10264 
    10265 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10266 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10267 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10268 steps = 76, shift = 5.59, angle = 0.0621 degrees 
    10269  
    10270 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10271 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10272 Matrix rotation and translation 
    10273 0.99756358 -0.05874597 -0.03762639 17.03267726 
    10274 0.04850469 0.97170779 -0.23115192 40.25528116 
    10275 0.05014110 0.22876368 0.97218979 -54.04780324 
    10276 Axis 0.95747580 -0.18271885 0.22327991 
    10277 Axis point 0.00000000 250.36666823 141.04458248 
    10278 Rotation angle (degrees) 13.89662639 
    10279 Shift along axis -3.11481096 
    10280  
    10281 
    10282 > fitmap #10 inMap #3
    10283 
    10284 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10285 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10286 correlation = 0.8568, correlation about mean = 0.5781, overlap = 3558 
    10287 steps = 44, shift = 7.16, angle = 0.0449 degrees 
    10288  
    10289 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10290 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10291 Matrix rotation and translation 
    10292 0.99761003 -0.05840145 -0.03692473 16.89545401 
    10293 0.04833157 0.97172405 -0.23111983 40.26468255 
    10294 0.04937838 0.22878283 0.97222432 -53.91200502 
    10295 Axis 0.95823323 -0.17981743 0.22238430 
    10296 Axis point 0.00000000 249.84511255 141.28381304 
    10297 Rotation angle (degrees) 13.88502314 
    10298 Shift along axis -3.03968957 
    10299  
    10300 
    10301 > fitmap #10 inMap #3
    10302 
    10303 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10304 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10305 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10306 steps = 48, shift = 1.8, angle = 0.00836 degrees 
    10307  
    10308 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10309 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10310 Matrix rotation and translation 
    10311 0.99761276 -0.05829589 -0.03701777 16.88582648 
    10312 0.04820957 0.97174018 -0.23107750 40.27940210 
    10313 0.04944252 0.22874126 0.97223085 -53.92000798 
    10314 Axis 0.95826339 -0.18018346 0.22195762 
    10315 Axis point 0.00000000 249.93305584 141.37145220 
    10316 Rotation angle (degrees) 13.88199349 
    10317 Shift along axis -3.04456971 
    10318  
    10319 
    10320 > transparency sel 0
    10321 
    10322 > fitmap #10 inMap #3
    10323 
    10324 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10325 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10326 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10327 steps = 72, shift = 13.9, angle = 0.0465 degrees 
    10328  
    10329 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10330 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10331 Matrix rotation and translation 
    10332 0.99756281 -0.05869859 -0.03772062 17.05066249 
    10333 0.04844003 0.97172527 -0.23109201 40.24794974 
    10334 0.05021885 0.22870161 0.97220038 -54.05210616 
    10335 Axis 0.95744179 -0.18311895 0.22309791 
    10336 Axis point 0.00000000 250.46172604 141.05984982 
    10337 Rotation angle (degrees) 13.89337027 
    10338 Shift along axis -3.10405733 
    10339  
    10340 
    10341 > fitmap #10 inMap #3
    10342 
    10343 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10344 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10345 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10346 steps = 40, shift = 0.0518, angle = 0.0612 degrees 
    10347  
    10348 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10349 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10350 Matrix rotation and translation 
    10351 0.99763034 -0.05811013 -0.03683542 16.80896704 
    10352 0.04807429 0.97176501 -0.23100123 40.28662163 
    10353 0.04921888 0.22868300 0.97225590 -53.87024704 
    10354 Axis 0.95852858 -0.17943949 0.22141459 
    10355 Axis point 0.00000000 249.78670315 141.50377468 
    10356 Rotation angle (degrees) 13.87393446 
    10357 Shift along axis -3.04479436 
    10358  
    10359 
    10360 > fitmap #10 inMap #3
    10361 
    10362 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10363 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10364 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10365 steps = 48, shift = 4.82, angle = 0.0281 degrees 
    10366  
    10367 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10368 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10369 Matrix rotation and translation 
    10370 0.99760112 -0.05833302 -0.03727202 16.90354102 
    10371 0.04819126 0.97175870 -0.23100342 40.27010628 
    10372 0.04969453 0.22865309 0.97223874 -53.95120164 
    10373 Axis 0.95804464 -0.18126108 0.22202451 
    10374 Axis point 0.00000000 250.11712382 141.32930292 
    10375 Rotation angle (degrees) 13.88022881 
    10376 Shift along axis -3.08354508 
    10377  
    10378 
    10379 > fitmap #10 inMap #3
    10380 
    10381 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10382 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10383 correlation = 0.8568, correlation about mean = 0.5781, overlap = 3558 
    10384 steps = 48, shift = 0.0405, angle = 0.0167 degrees 
    10385  
    10386 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10387 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10388 Matrix rotation and translation 
    10389 0.99760845 -0.05837462 -0.03700971 16.90040137 
    10390 0.04828569 0.97172506 -0.23112518 40.27730340 
    10391 0.04945511 0.22878539 0.97221982 -53.92943270 
    10392 Axis 0.95820875 -0.18014664 0.22222329 
    10393 Axis point 0.00000000 249.92130233 141.31760663 
    10394 Rotation angle (degrees) 13.88562857 
    10395 Shift along axis -3.04608421 
    10396  
    10397 
    10398 > fitmap #10 inMap #3
    10399 
    10400 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10401 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10402 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10403 steps = 64, shift = 1.39, angle = 0.0417 degrees 
    10404  
    10405 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10406 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10407 Matrix rotation and translation 
    10408 0.99756244 -0.05877019 -0.03761883 17.04149601 
    10409 0.04852926 0.97170308 -0.23116656 40.25274180 
    10410 0.05014003 0.22877746 0.97218660 -54.04938466 
    10411 Axis 0.95746215 -0.18268698 0.22336449 
    10412 Axis point 0.00000000 250.36179417 141.02457003 
    10413 Rotation angle (degrees) 13.89770440 
    10414 Shift along axis -3.10977751 
    10415  
    10416 
    10417 > fitmap #10 inMap #3
    10418 
    10419 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10420 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10421 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10422 steps = 40, shift = 0.012, angle = 0.0211 degrees 
    10423  
    10424 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10425 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10426 Matrix rotation and translation 
    10427 0.99758636 -0.05846557 -0.03745882 16.95960118 
    10428 0.04827606 0.97174741 -0.23103321 40.26271302 
    10429 0.04990800 0.22866721 0.97222448 -53.99106688 
    10430 Axis 0.95781062 -0.18203347 0.22240194 
    10431 Axis point 0.00000000 250.25890652 141.23192274 
    10432 Rotation angle (degrees) 13.88504114 
    10433 Shift along axis -3.09279317 
    10434  
    10435 
    10436 > fitmap #10 inMap #3
    10437 
    10438 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10439 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10440 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10441 steps = 60, shift = 0.00183, angle = 0.00457 degrees 
    10442  
    10443 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10444 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10445 Matrix rotation and translation 
    10446 0.99758103 -0.05852745 -0.03750415 16.97925172 
    10447 0.04832478 0.97173957 -0.23105599 40.25973348 
    10448 0.04996738 0.22868470 0.97221732 -54.00431086 
    10449 Axis 0.95773040 -0.18222041 0.22259426 
    10450 Axis point 0.00000000 250.29137890 141.18788159 
    10451 Rotation angle (degrees) 13.88746841 
    10452 Shift along axis -3.09564909 
    10453  
    10454 
    10455 > fitmap #10 inMap #3
    10456 
    10457 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10458 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10459 correlation = 0.8568, correlation about mean = 0.578, overlap = 3558 
    10460 steps = 44, shift = 0.027, angle = 0.0287 degrees 
    10461  
    10462 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10463 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10464 Matrix rotation and translation 
    10465 0.99758039 -0.05877171 -0.03713754 16.98324872 
    10466 0.04863423 0.97166601 -0.23130030 40.26103021 
    10467 0.04967919 0.22893449 0.97217330 -53.98927955 
    10468 Axis 0.95780609 -0.18067647 0.22352518 
    10469 Axis point 0.00000000 249.96894356 141.04064366 
    10470 Rotation angle (degrees) 13.90157254 
    10471 Shift along axis -3.07552502 
    10472  
    10473 
    10474 > fitmap #10 inMap #3
    10475 
    10476 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10477 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10478 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10479 steps = 52, shift = 6.38, angle = 0.0316 degrees 
    10480  
    10481 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10482 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10483 Matrix rotation and translation 
    10484 0.99755755 -0.05882016 -0.03767035 17.06293387 
    10485 0.04856590 0.97170025 -0.23117077 40.24572003 
    10486 0.05020178 0.22877666 0.97218361 -54.05942813 
    10487 Axis 0.95738291 -0.18290629 0.22352462 
    10488 Axis point 0.00000000 250.40169959 140.98129724 
    10489 Rotation angle (degrees) 13.89898295 
    10490 Shift along axis -3.10904704 
    10491  
    10492 
    10493 > fitmap #10 inMap #3
    10494 
    10495 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10496 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10497 correlation = 0.8568, correlation about mean = 0.5779, overlap = 3558 
    10498 steps = 52, shift = 5.58, angle = 0.102 degrees 
    10499  
    10500 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10501 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10502 Matrix rotation and translation 
    10503 0.99767561 -0.05748361 -0.03659159 16.65158091 
    10504 0.04753466 0.97186145 -0.23070700 40.30705835 
    10505 0.04882382 0.22843138 0.97233496 -53.75952260 
    10506 Axis 0.95917992 -0.17844021 0.21939226 
    10507 Axis point 0.00000000 249.63561483 141.93192880 
    10508 Rotation angle (degrees) 13.84753326 
    10509 Shift along axis -3.01496132 
    10510  
    10511 
    10512 > fitmap #10 inMap #3
    10513 
    10514 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10515 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10516 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10517 steps = 52, shift = 2.82, angle = 0.105 degrees 
    10518  
    10519 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10520 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10521 Matrix rotation and translation 
    10522 0.99755375 -0.05882880 -0.03775751 17.07076267 
    10523 0.04855418 0.97170015 -0.23117364 40.25279800 
    10524 0.05028865 0.22877485 0.97217954 -54.07703991 
    10525 Axis 0.95732097 -0.18325625 0.22350324 
    10526 Axis point 0.00000000 250.47274074 140.98736275 
    10527 Rotation angle (degrees) 13.89993288 
    10528 Shift along axis -3.12077149 
    10529  
    10530 
    10531 > surface dust #10 size 29.6
    10532 
    10533 [Repeated 1 time(s)]
    10534 
    10535 > fitmap #10 inMap #3
    10536 
    10537 Fit map cryosparc_P12_J2769_004_volume_map.mrc in map
    10538 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 4164 points 
    10539 correlation = 0.8568, correlation about mean = 0.5777, overlap = 3558 
    10540 steps = 68, shift = 2.1, angle = 0.0137 degrees 
    10541  
    10542 Position of cryosparc_P12_J2769_004_volume_map.mrc (#10) relative to
    10543 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10544 Matrix rotation and translation 
    10545 0.99756944 -0.05863951 -0.03763726 17.02343676 
    10546 0.04840184 0.97172834 -0.23108710 40.25342177 
    10547 0.05012402 0.22870372 0.97220478 -54.03528877 
    10548 Axis 0.95754956 -0.18276957 0.22292179 
    10549 Axis point 0.00000000 250.39304543 141.10460914 
    10550 Rotation angle (degrees) 13.89168886 
    10551 Shift along axis -3.10195938 
    10552  
    10553 
    10554 > open
    10555 > /Volumes/astbury/Users/um18fa/240607_RNA_MSI2_1/Class3D/job008/run_it011_class005.mrc
    10556 
    10557 Opened run_it011_class005.mrc as #19, grid size 128,128,128, pixel 2.92, shown
    10558 at level 0.00366, step 1, values float32 
    10559 
    10560 > open
    10561 > /Volumes/astbury/Users/um18fa/240607_RNA_MSI2_1/Class3D/job008/run_it011_class006.mrc
    10562 
    10563 Opened run_it011_class006.mrc as #20, grid size 128,128,128, pixel 2.92, shown
    10564 at level 0.00513, step 1, values float32 
    10565 
    10566 > show #11 models
    10567 
    10568 > hide #11 models
    10569 
    10570 > hide #!10 models
    10571 
    10572 > hide #!3 models
    10573 
    10574 > tile
    10575 
    10576 3 models tiled 
    10577 
    10578 > surface dust #19 size 29.2
    10579 
    10580 > surface dust #20 size 29.2
    10581 
    10582 > volume #19 level 0.006384
    10583 
    10584 > volume #18 level 0.03422
    10585 
    10586 > volume #20 level 0.009231
    10587 
    10588 > tile
    10589 
    10590 3 models tiled 
    10591 
    10592 > close #19
    10593 
    10594 > close #20
    10595 
    10596 > show #13 models
    10597 
    10598 > tile
    10599 
    10600 2 models tiled 
    10601 
    10602 > show #!10 models
    10603 
    10604 > tile
    10605 
    10606 3 models tiled 
    10607 
    10608 > ui mousemode right "rotate selected models"
    10609 
    10610 > view matrix models
    10611 > #13,0.041911,-0.78613,0.61663,202.36,-0.619,-0.50489,-0.6016,185.7,0.78427,-0.35648,-0.50777,-126.02,#10,0.63952,0.45109,-0.62252,12.456,-0.75426,0.21155,-0.62157,317.95,-0.14869,0.86705,0.47552,-493.51
    10612 
    10613 > select add #13
    10614 
    10615 10778 atoms, 11624 bonds, 336 residues, 3 models selected 
    10616 
    10617 > select subtract #13
    10618 
    10619 2 models selected 
    10620 
    10621 > view matrix models
    10622 > #10,0.77501,0.0652,0.62858,-186.55,-0.59706,0.4015,0.6945,-6.8623,-0.20709,-0.91354,0.35009,-121.02
    10623 
    10624 > view matrix models
    10625 > #10,0.57872,0.37525,0.72406,-226.46,-0.72878,0.63642,0.25267,60.789,-0.36599,-0.67391,0.64179,-193.35
    10626 
    10627 > view matrix models
    10628 > #10,-0.54484,-0.29115,0.78637,101.91,0.83819,-0.21614,0.50072,-126.13,0.024183,0.93194,0.36181,-516.43
    10629 
    10630 > view matrix models
    10631 > #10,-0.86106,-0.37933,-0.33866,400.28,-0.14463,-0.4558,0.87825,32.662,-0.48751,0.80521,0.33761,-389.97
    10632 
    10633 > view matrix models
    10634 > #10,-0.6145,-0.044817,0.78765,68.388,0.66904,-0.55868,0.49017,-26.979,0.41807,0.82817,0.37329,-574.31
    10635 
    10636 > view matrix models
    10637 > #10,0.54071,-0.6166,-0.57222,223.31,-0.83443,-0.47934,-0.27196,395.12,-0.1066,0.62453,-0.77369,-209.98
    10638 
    10639 > select add #13
    10640 
    10641 10778 atoms, 11624 bonds, 336 residues, 3 models selected 
    10642 
    10643 > select subtract #10
    10644 
    10645 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    10646 
    10647 > view matrix models
    10648 > #13,-0.71363,0.57259,-0.40359,243.79,-0.24932,0.3308,0.91017,203.88,0.65466,0.75015,-0.093307,-96.516
    10649 
    10650 > view matrix models
    10651 > #13,-0.70898,0.67782,-0.1947,244.66,-0.21149,0.05902,0.9756,194.79,0.67277,0.73285,0.10151,-99.171
    10652 
    10653 > select subtract #13
    10654 
    10655 Nothing selected 
    10656 
    10657 > transparency #10.1 50
    10658 
    10659 > select add #13
    10660 
    10661 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    10662 
    10663 > fitmap #13 inMap #10 resolution 15 search 200
    10664 
    10665 Found 107 unique fits from 200 random placements having fraction of points
    10666 inside contour >= 0.100 (198 of 200). 
    10667  
    10668 Correlations and times found: 
    10669 0.491 (2), 0.4793 (4), 0.4761 (3), 0.4757 (2), 0.4672 (3), 0.4668 (3), 0.4652
    10670 (10), 0.4641 (5), 0.4636 (7), 0.4631 (1), 0.4622 (1), 0.462 (3), 0.4612 (1),
    10671 0.4591 (1), 0.4579 (3), 0.4542 (2), 0.4506 (1), 0.4504 (2), 0.4498 (1), 0.449
    10672 (2), 0.4484 (1), 0.4458 (5), 0.4438 (1), 0.4415 (2), 0.4407 (2), 0.4407 (3),
    10673 0.44 (2), 0.4395 (6), 0.4395 (2), 0.4389 (2), 0.4385 (2), 0.4375 (2), 0.4335
    10674 (1), 0.4333 (1), 0.4329 (1), 0.4324 (1), 0.432 (1), 0.4312 (2), 0.4292 (3),
    10675 0.4285 (1), 0.4254 (3), 0.4247 (1), 0.4238 (2), 0.4234 (1), 0.4223 (2), 0.422
    10676 (1), 0.4218 (1), 0.4217 (1), 0.4216 (2), 0.4211 (2), 0.4209 (1), 0.4198 (1),
    10677 0.4197 (1), 0.4195 (1), 0.4177 (2), 0.4173 (1), 0.4168 (2), 0.4159 (1), 0.4159
    10678 (1), 0.4146 (2), 0.4146 (3), 0.4136 (1), 0.4135 (2), 0.4127 (1), 0.4125 (3),
    10679 0.4122 (2), 0.4118 (1), 0.4112 (1), 0.4108 (1), 0.4096 (1), 0.4071 (1), 0.4068
    10680 (4), 0.4057 (2), 0.404 (2), 0.4029 (2), 0.4027 (2), 0.4021 (1), 0.4017 (1),
    10681 0.4016 (2), 0.4013 (1), 0.4011 (1), 0.3993 (1), 0.399 (2), 0.398 (1), 0.3975
    10682 (1), 0.3967 (1), 0.3945 (1), 0.3914 (3), 0.391 (1), 0.3888 (1), 0.388 (2),
    10683 0.3831 (3), 0.3804 (1), 0.3777 (1), 0.3767 (2), 0.3755 (1), 0.3698 (1), 0.3688
    10684 (1), 0.3678 (2), 0.357 (1), 0.3567 (1), 0.3562 (1), 0.3558 (2), 0.3477 (1),
    10685 0.344 (2), 0.3267 (1), 0.3234 (1) 
    10686  
    10687 Best fit found: 
    10688 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10689 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10690 correlation = 0.491, correlation about mean = 0.2304, overlap = 225.2 
    10691 steps = 124, shift = 47, angle = 11.6 degrees 
    10692 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10693 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10694 Matrix rotation and translation 
    10695 0.42761401 0.04108881 0.90302704 186.23097556 
    10696 0.67770147 -0.67566364 -0.29017119 174.40957083 
    10697 0.59821975 0.73606408 -0.31676921 231.81231164 
    10698 Axis 0.82393540 0.24472119 0.51111838 
    10699 Axis point 0.00000000 44.49185029 78.79852013 
    10700 Rotation angle (degrees) 141.48171200 
    10701 Shift along axis 314.60754440 
    10702  
    10703 Found 107 fits. 
    10704 
    10705 > ui tool show "Fit in Map"
    10706 
    10707 > fitmap #11 inMap #3 resolution 15 metric correlation
    10708 
    10709 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10710 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    10711 correlation = 0, correlation about mean = 0, overlap = 0 
    10712 steps = 24, shift = 0, angle = 0 degrees 
    10713  
    10714 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10715 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    10716 Matrix rotation and translation 
    10717 0.41648523 0.34668768 0.84044500 391.03847331 
    10718 0.59373831 -0.80379144 0.03733895 128.01660093 
    10719 0.68848736 0.48345326 -0.54060903 -284.82118000 
    10720 Axis 0.83838433 0.28557457 0.46428319 
    10721 Axis point 0.00000000 29.12925896 -245.69960966 
    10722 Rotation angle (degrees) 164.57029226 
    10723 Shift along axis 232.16112926 
    10724  
    10725 Average map value = 0 for 0 atoms, 10778 outside contour 
    10726 Average map value = 0.5611 for 10778 atoms, 7384 outside contour 
    10727 Correlation = 0.491, Correlation about mean = 0.2304, Overlap = 225.2 
    10728  
    10729 
    10730 > fitmap #13 inMap #10
    10731 
    10732 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    10733 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    10734 average map value = 0.5622, steps = 64 
    10735 shifted from previous position = 0.925 
    10736 rotated from previous position = 1.28 degrees 
    10737 atoms outside contour = 7433, contour level = 0.39813 
    10738  
    10739 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    10740 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10741 Matrix rotation and translation 
    10742 0.42163610 0.06068111 0.90473238 186.95420656 
    10743 0.69033841 -0.66840431 -0.27689081 174.28513956 
    10744 0.58792498 0.74131873 -0.32371391 232.51576155 
    10745 Axis 0.82221066 0.25582399 0.50845227 
    10746 Axis point 0.00000000 42.96088868 78.13282084 
    10747 Rotation angle (degrees) 141.74297890 
    10748 Shift along axis 316.52522861 
    10749  
    10750 
    10751 > fitmap #13 inMap #10
    10752 
    10753 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    10754 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    10755 average map value = 0.5622, steps = 40 
    10756 shifted from previous position = 0.0513 
    10757 rotated from previous position = 0.0493 degrees 
    10758 atoms outside contour = 7434, contour level = 0.39813 
    10759  
    10760 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    10761 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10762 Matrix rotation and translation 
    10763 0.42235231 0.06031716 0.90442260 186.91470955 
    10764 0.68998615 -0.66846014 -0.27763308 174.27520527 
    10765 0.58782442 0.74129809 -0.32394370 232.50422387 
    10766 Axis 0.82243087 0.25554241 0.50823768 
    10767 Axis point 0.00000000 42.97493998 78.20692940 
    10768 Rotation angle (degrees) 141.72306147 
    10769 Shift along axis 316.42654074 
    10770  
    10771 
    10772 > fitmap #13 inMap #10
    10773 
    10774 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    10775 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    10776 average map value = 0.5622, steps = 44 
    10777 shifted from previous position = 0.0551 
    10778 rotated from previous position = 0.055 degrees 
    10779 atoms outside contour = 7433, contour level = 0.39813 
    10780  
    10781 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    10782 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10783 Matrix rotation and translation 
    10784 0.42155478 0.06072339 0.90476744 186.95751029 
    10785 0.69038246 -0.66839308 -0.27680809 174.28516355 
    10786 0.58793156 0.74132539 -0.32368668 232.51367253 
    10787 Axis 0.82218533 0.25585821 0.50847602 
    10788 Axis point 0.00000000 42.95890662 78.12304705 
    10789 Rotation angle (degrees) 141.74496169 
    10790 Shift along axis 316.53363789 
    10791  
    10792 
    10793 > fitmap #13 inMap #10
    10794 
    10795 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    10796 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    10797 average map value = 0.5622, steps = 28 
    10798 shifted from previous position = 0.0734 
    10799 rotated from previous position = 0.056 degrees 
    10800 atoms outside contour = 7433, contour level = 0.39813 
    10801  
    10802 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    10803 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10804 Matrix rotation and translation 
    10805 0.42231912 0.06021335 0.90444502 186.89493452 
    10806 0.68992963 -0.66851238 -0.27764774 174.26676671 
    10807 0.58791459 0.74125942 -0.32386855 232.49071698 
    10808 Axis 0.82242013 0.25549040 0.50828120 
    10809 Axis point 0.00000000 42.98226923 78.20368709 
    10810 Rotation angle (degrees) 141.72353668 
    10811 Shift along axis 316.40030377 
    10812  
    10813 
    10814 > select subtract #13
    10815 
    10816 Nothing selected 
    10817 
    10818 > select #13:63-68
    10819 
    10820 189 atoms, 203 bonds, 6 residues, 1 model selected 
    10821 
    10822 > fitmap #13 inMap #10
    10823 
    10824 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    10825 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    10826 average map value = 0.5176, steps = 48 
    10827 shifted from previous position = 0.699 
    10828 rotated from previous position = 1.49 degrees 
    10829 atoms outside contour = 7519, contour level = 0.39813 
    10830  
    10831 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    10832 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10833 Matrix rotation and translation 
    10834 0.57137038 0.33590728 0.74880042 205.59475359 
    10835 -0.51447228 -0.56426749 0.64569378 136.57733688 
    10836 0.63941700 -0.75416737 -0.14959078 184.94023207 
    10837 Axis -0.85276237 0.06663379 -0.51803116 
    10838 Axis point 0.00000000 91.39087698 -17.15588709 
    10839 Rotation angle (degrees) 124.83701548 
    10840 Shift along axis -262.02760524 
    10841  
    10842 
    10843 > fitmap #13 inMap #10 resolution 15 metric correlation
    10844 
    10845 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10846 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10847 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10848 steps = 80, shift = 4.14, angle = 5.26 degrees 
    10849  
    10850 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10851 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10852 Matrix rotation and translation 
    10853 0.60489013 0.37469466 0.70264623 209.45794322 
    10854 -0.51168387 -0.49321182 0.70350672 140.82989280 
    10855 0.61015366 -0.78507703 -0.10661377 179.28007843 
    10856 Axis -0.85799068 0.05331091 -0.51089132 
    10857 Axis point -0.00000000 91.94775297 -25.01144793 
    10858 Rotation angle (degrees) 119.83260762 
    10859 Shift along axis -263.79782867 
    10860  
    10861 Average map value = 0.5058 for 10778 atoms, 7502 outside contour 
    10862 
    10863 > fitmap #13 inMap #10 resolution 15 metric correlation
    10864 
    10865 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10866 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10867 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10868 steps = 48, shift = 0.029, angle = 0.0337 degrees 
    10869  
    10870 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10871 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10872 Matrix rotation and translation 
    10873 0.60528385 0.37468136 0.70231420 209.44330661 
    10874 -0.51159666 -0.49282974 0.70383783 140.84591401 
    10875 0.60983626 -0.78532328 -0.10661617 179.26010632 
    10876 Axis -0.85810421 0.05328886 -0.51070291 
    10877 Axis point 0.00000000 91.97279154 -25.00867785 
    10878 Rotation angle (degrees) 119.80707005 
    10879 Shift along axis -263.76732217 
    10880  
    10881 Average map value = 0.5059 for 10778 atoms, 7504 outside contour 
    10882 
    10883 > fitmap #13 inMap #10 resolution 15 metric correlation
    10884 
    10885 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10886 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10887 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10888 steps = 44, shift = 0.0593, angle = 0.0444 degrees 
    10889  
    10890 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10891 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10892 Matrix rotation and translation 
    10893 0.60526048 0.37536717 0.70196804 209.53013432 
    10894 -0.51119501 -0.49268925 0.70422791 140.85809836 
    10895 0.61019617 -0.78508389 -0.10631954 179.26780236 
    10896 Axis -0.85807388 0.05287479 -0.51079690 
    10897 Axis point 0.00000000 91.90484632 -25.03040885 
    10898 Rotation angle (degrees) 119.79341072 
    10899 Shift along axis -263.91393061 
    10900  
    10901 Average map value = 0.5057 for 10778 atoms, 7497 outside contour 
    10902 
    10903 > fitmap #13 inMap #10 resolution 15 metric correlation
    10904 
    10905 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10906 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10907 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10908 steps = 52, shift = 2.94, angle = 0.0227 degrees 
    10909  
    10910 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10911 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10912 Matrix rotation and translation 
    10913 0.60553007 0.37518804 0.70183129 209.48875290 
    10914 -0.51121764 -0.49249170 0.70434965 140.86429832 
    10915 0.60990968 -0.78529344 -0.10641582 179.25778016 
    10916 Axis -0.85815980 0.05295459 -0.51064427 
    10917 Axis point 0.00000000 91.93880274 -25.01398010 
    10918 Rotation angle (degrees) 119.78116913 
    10919 Shift along axis -263.85237394 
    10920  
    10921 Average map value = 0.5058 for 10778 atoms, 7504 outside contour 
    10922 
    10923 > fitmap #13 inMap #10 resolution 15 metric correlation
    10924 
    10925 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10926 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10927 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10928 steps = 56, shift = 0.0026, angle = 0.00419 degrees 
    10929  
    10930 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10931 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10932 Matrix rotation and translation 
    10933 0.60547455 0.37520468 0.70187030 209.48520130 
    10934 -0.51123338 -0.49252647 0.70431392 140.86176581 
    10935 0.60995160 -0.78526368 -0.10639511 179.25922139 
    10936 Axis -0.85814175 0.05295412 -0.51067464 
    10937 Axis point 0.00000000 91.93498372 -25.01499875 
    10938 Rotation angle (degrees) 119.78346569 
    10939 Shift along axis -263.85192667 
    10940  
    10941 Average map value = 0.5059 for 10778 atoms, 7504 outside contour 
    10942 
    10943 > fitmap #13 inMap #10 resolution 15 metric correlation
    10944 
    10945 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10946 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10947 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10948 steps = 72, shift = 7.41, angle = 0.0147 degrees 
    10949  
    10950 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10951 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10952 Matrix rotation and translation 
    10953 0.60542621 0.37500494 0.70201872 209.47502517 
    10954 -0.51139304 -0.49258372 0.70415795 140.85972933 
    10955 0.60986573 -0.78532318 -0.10644820 179.25328457 
    10956 Axis -0.85813108 0.05309188 -0.51067828 
    10957 Axis point 0.00000000 91.95245135 -25.02230525 
    10958 Rotation angle (degrees) 119.78870334 
    10959 Shift along axis -263.81928081 
    10960  
    10961 Average map value = 0.5058 for 10778 atoms, 7504 outside contour 
    10962 
    10963 > fitmap #13 inMap #10 resolution 15 metric correlation
    10964 
    10965 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10966 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10967 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10968 steps = 68, shift = 10.4, angle = 0.0124 degrees 
    10969  
    10970 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10971 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10972 Matrix rotation and translation 
    10973 0.60541189 0.37482280 0.70212834 209.46237062 
    10974 -0.51152292 -0.49261762 0.70403989 140.85731506 
    10975 0.60977102 -0.78538887 -0.10650614 179.24823833 
    10976 Axis -0.85813095 0.05321146 -0.51066604 
    10977 Axis point 0.00000000 91.96936038 -25.02515917 
    10978 Rotation angle (degrees) 119.79220775 
    10979 Shift along axis -263.78690922 
    10980  
    10981 Average map value = 0.5059 for 10778 atoms, 7504 outside contour 
    10982 
    10983 > fitmap #13 inMap #10 resolution 15 metric correlation
    10984 
    10985 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    10986 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    10987 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    10988 steps = 48, shift = 0.0209, angle = 0.0738 degrees 
    10989  
    10990 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    10991 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    10992 Matrix rotation and translation 
    10993 0.60587864 0.37563594 0.70129067 209.53046367 
    10994 -0.51095129 -0.49193397 0.70493243 140.89371421 
    10995 0.60978669 -0.78542888 -0.10612065 179.23226469 
    10996 Axis -0.85823388 0.05269314 -0.51054680 
    10997 Axis point -0.00000000 91.92340715 -25.04668903 
    10998 Rotation angle (degrees) 119.74151968 
    10999 Shift along axis -263.90847000 
    11000  
    11001 Average map value = 0.5057 for 10778 atoms, 7500 outside contour 
    11002 
    11003 > fitmap #13 inMap #10 resolution 15 metric correlation
    11004 
    11005 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11006 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11007 correlation = 0.4645, correlation about mean = 0.2035, overlap = 207.5 
    11008 steps = 68, shift = 1.22, angle = 3.72 degrees 
    11009  
    11010 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11011 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11012 Matrix rotation and translation 
    11013 0.79378421 0.56416031 -0.22722164 248.75042098 
    11014 0.56543854 -0.54692993 0.61737095 181.11440386 
    11015 0.22402186 -0.61853919 -0.75314236 179.88191854 
    11016 Axis -0.93934752 -0.34296544 0.00097151 
    11017 Axis point 0.00000000 81.13282039 74.14416084 
    11018 Rotation angle (degrees) 138.86346336 
    11019 Shift along axis -295.60431439 
    11020  
    11021 Average map value = 0.5191 for 10778 atoms, 7696 outside contour 
    11022 
    11023 > fitmap #13 inMap #10 resolution 15 metric correlation
    11024 
    11025 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11026 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11027 correlation = 0.4645, correlation about mean = 0.2035, overlap = 207.5 
    11028 steps = 92, shift = 4.38, angle = 0.0282 degrees 
    11029  
    11030 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11031 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11032 Matrix rotation and translation 
    11033 0.79387342 0.56413717 -0.22696727 248.77723694 
    11034 0.56517145 -0.54679945 0.61773100 181.08454638 
    11035 0.22437943 -0.61867565 -0.75292380 179.89703253 
    11036 Axis -0.93936678 -0.34291315 0.00078580 
    11037 Axis point 0.00000000 81.13038893 74.12527114 
    11038 Rotation angle (degrees) 138.84438188 
    11039 Shift along axis -295.64798233 
    11040  
    11041 Average map value = 0.519 for 10778 atoms, 7695 outside contour 
    11042 
    11043 > fitmap #13 inMap #10 resolution 15 metric correlation
    11044 
    11045 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11046 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11047 correlation = 0.4645, correlation about mean = 0.2035, overlap = 207.5 
    11048 steps = 100, shift = 0.00514, angle = 0.00751 degrees 
    11049  
    11050 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11051 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11052 Matrix rotation and translation 
    11053 0.79380905 0.56418861 -0.22706456 248.77550828 
    11054 0.56527714 -0.54674782 0.61767999 181.09398453 
    11055 0.22434095 -0.61867437 -0.75293632 179.89592875 
    11056 Axis -0.93934769 -0.34296536 0.00082703 
    11057 Axis point 0.00000000 81.12948357 74.13144555 
    11058 Rotation angle (degrees) 138.84548202 
    11059 Shift along axis -295.64688169 
    11060  
    11061 Average map value = 0.5191 for 10778 atoms, 7695 outside contour 
    11062 
    11063 > fitmap #13 inMap #10 resolution 15 metric correlation
    11064 
    11065 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11066 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11067 correlation = 0.4645, correlation about mean = 0.2035, overlap = 207.5 
    11068 steps = 80, shift = 0.0361, angle = 0.0362 degrees 
    11069  
    11070 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11071 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11072 Matrix rotation and translation 
    11073 0.79353899 0.56438603 -0.22751744 248.75396139 
    11074 0.56577045 -0.54662085 0.61734061 181.13891830 
    11075 0.22405262 -0.61860649 -0.75307792 179.88517029 
    11076 Axis -0.93927077 -0.34317533 0.00105210 
    11077 Axis point 0.00000000 81.12661350 74.16141544 
    11078 Rotation angle (degrees) 138.85787684 
    11079 Shift along axis -295.62047611 
    11080  
    11081 Average map value = 0.5191 for 10778 atoms, 7700 outside contour 
    11082 
    11083 > fitmap #13 inMap #10 resolution 15 metric correlation
    11084 
    11085 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11086 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11087 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11088 steps = 48, shift = 0.417, angle = 0.604 degrees 
    11089  
    11090 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11091 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11092 Matrix rotation and translation 
    11093 0.99934056 0.03630652 0.00038827 225.67641298 
    11094 0.02825492 -0.78434686 0.61967865 152.30679843 
    11095 0.02280290 -0.61925904 -0.78485551 174.11707172 
    11096 Axis -0.99981528 -0.01808848 -0.00649759 
    11097 Axis point 0.00000000 104.07831674 60.60675136 
    11098 Rotation angle (degrees) 141.71428852 
    11099 Shift along axis -229.52106495 
    11100  
    11101 Average map value = 0.5204 for 10778 atoms, 7668 outside contour 
    11102 
    11103 > fitmap #13 inMap #10 resolution 15 metric correlation
    11104 
    11105 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11106 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11107 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11108 steps = 44, shift = 0.0651, angle = 0.0311 degrees 
    11109  
    11110 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11111 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11112 Matrix rotation and translation 
    11113 0.99934153 0.03628010 0.00037658 225.73505771 
    11114 0.02822907 -0.78401154 0.62010402 152.30169398 
    11115 0.02279267 -0.61968507 -0.78451948 174.07357623 
    11116 Axis -0.99981551 -0.01807723 -0.00649267 
    11117 Axis point 0.00000000 104.09530719 60.56347312 
    11118 Rotation angle (degrees) 141.68321334 
    11119 Shift along axis -229.57680785 
    11120  
    11121 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    11122 
    11123 > fitmap #13 inMap #10 resolution 15 metric correlation
    11124 
    11125 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11126 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11127 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11128 steps = 36, shift = 0.0491, angle = 0.0431 degrees 
    11129  
    11130 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11131 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11132 Matrix rotation and translation 
    11133 0.99933649 0.03641416 0.00068421 225.69040160 
    11134 0.02815917 -0.78443167 0.61957565 152.29420549 
    11135 0.02309804 -0.61914528 -0.78493662 174.12381381 
    11136 Axis -0.99981414 -0.01809097 -0.00666289 
    11137 Axis point 0.00000000 104.05954481 60.59950456 
    11138 Rotation angle (degrees) 141.72214962 
    11139 Shift along axis -229.56377268 
    11140  
    11141 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11142 
    11143 > fitmap #13 inMap #10 resolution 15 metric correlation
    11144 
    11145 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11146 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11147 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11148 steps = 56, shift = 0.0157, angle = 0.013 degrees 
    11149  
    11150 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11151 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11152 Matrix rotation and translation 
    11153 0.99934101 0.03629267 0.00050376 225.67481553 
    11154 0.02817700 -0.78447076 0.61952535 152.29927250 
    11155 0.02287941 -0.61910289 -0.78497646 174.12579377 
    11156 Axis -0.99981542 -0.01806153 -0.00655093 
    11157 Axis point 0.00000000 104.06745103 60.61353212 
    11158 Rotation angle (degrees) 141.72559034 
    11159 Shift along axis -229.52460355 
    11160  
    11161 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11162 
    11163 > fitmap #13 inMap #10 resolution 15 metric correlation
    11164 
    11165 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11166 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11167 correlation = 0.4592, correlation about mean = 0.202, overlap = 206.3 
    11168 steps = 44, shift = 0.053, angle = 0.0425 degrees 
    11169  
    11170 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11171 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11172 Matrix rotation and translation 
    11173 0.99933088 0.03657359 0.00020328 225.71810034 
    11174 0.02856945 -0.78407330 0.62001034 152.33314008 
    11175 0.02283538 -0.61958967 -0.78459359 174.06157524 
    11176 Axis -0.99981254 -0.01825416 -0.00645583 
    11177 Axis point 0.00000000 104.08496089 60.56811710 
    11178 Rotation angle (degrees) 141.68998352 
    11179 Shift along axis -229.58021247 
    11180  
    11181 Average map value = 0.5205 for 10778 atoms, 7671 outside contour 
    11182 
    11183 > fitmap #13 inMap #10 resolution 15 metric correlation
    11184 
    11185 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11186 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11187 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11188 steps = 44, shift = 0.0339, angle = 0.0174 degrees 
    11189  
    11190 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11191 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11192 Matrix rotation and translation 
    11193 0.99933928 0.03634212 0.00035790 225.72581253 
    11194 0.02828929 -0.78400897 0.62010452 152.30784089 
    11195 0.02281650 -0.61968468 -0.78451909 174.07866816 
    11196 Axis -0.99981488 -0.01811150 -0.00649412 
    11197 Axis point 0.00000000 104.09547251 60.56613209 
    11198 Rotation angle (degrees) 141.68318057 
    11199 Shift along axis -229.57303771 
    11200  
    11201 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    11202 
    11203 > fitmap #13 inMap #10 resolution 15 metric correlation
    11204 
    11205 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11206 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11207 correlation = 0.4591, correlation about mean = 0.2018, overlap = 206.3 
    11208 steps = 104, shift = 25.6, angle = 0.0621 degrees 
    11209  
    11210 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11211 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11212 Matrix rotation and translation 
    11213 0.99933850 0.03636104 0.00056762 225.65512870 
    11214 0.02819861 -0.78467163 0.61926992 152.29820702 
    11215 0.02296268 -0.61884426 -0.78517794 174.14823745 
    11216 Axis -0.99981473 -0.01808470 -0.00659141 
    11217 Axis point 0.00000000 104.05098474 60.63487816 
    11218 Rotation angle (degrees) 141.74431940 
    11219 Shift along axis -229.51547128 
    11220  
    11221 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    11222 
    11223 > fitmap #13 inMap #10 resolution 15 metric correlation
    11224 
    11225 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11226 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11227 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11228 steps = 76, shift = 20.3, angle = 0.049 degrees 
    11229  
    11230 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11231 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11232 Matrix rotation and translation 
    11233 0.99934605 0.03615298 0.00055936 225.70436318 
    11234 0.02802141 -0.78416385 0.61992083 152.29427524 
    11235 0.02285061 -0.61949975 -0.78466414 174.09313002 
    11236 Axis -0.99981679 -0.01798192 -0.00655958 
    11237 Axis point 0.00000000 104.09195659 60.57300727 
    11238 Rotation angle (degrees) 141.69672788 
    11239 Shift along axis -229.54353499 
    11240  
    11241 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    11242 
    11243 > view matrix models
    11244 > #13,0.56468,0.82272,0.06534,151.72,-0.81967,0.5683,-0.071966,90.24,-0.096341,-0.01292,0.99526,-272.35
    11245 
    11246 > fitmap #13 inMap #10 resolution 15 metric correlation
    11247 
    11248 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11249 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11250 correlation = 0.4592, correlation about mean = 0.202, overlap = 206.3 
    11251 steps = 52, shift = 1.2, angle = 2.26 degrees 
    11252  
    11253 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11254 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11255 Matrix rotation and translation 
    11256 0.99934127 0.03628843 0.00022559 225.74786882 
    11257 0.02832103 -0.78378529 0.62038577 152.31127132 
    11258 0.02268963 -0.61997072 -0.78429675 174.05417559 
    11259 Axis -0.99981542 -0.01810762 -0.00642229 
    11260 Axis point 0.00000000 104.11348094 60.54621685 
    11261 Rotation angle (degrees) 141.66248450 
    11262 Shift along axis -229.58202060 
    11263  
    11264 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    11265 
    11266 > fitmap #13 inMap #10 resolution 15 metric correlation
    11267 
    11268 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11269 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11270 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11271 steps = 36, shift = 0.0685, angle = 0.0539 degrees 
    11272  
    11273 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11274 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11275 Matrix rotation and translation 
    11276 0.99934113 0.03629046 0.00043278 225.68206550 
    11277 0.02821511 -0.78435792 0.61966647 152.30305740 
    11278 0.02282743 -0.61924597 -0.78486511 174.11554794 
    11279 Axis -0.99981544 -0.01807272 -0.00651690 
    11280 Axis point 0.00000000 104.07634400 60.60451170 
    11281 Rotation angle (degrees) 141.71521749 
    11282 Shift along axis -229.52763588 
    11283  
    11284 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    11285 
    11286 > fitmap #13 inMap #10 resolution 15 metric correlation
    11287 
    11288 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11289 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11290 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11291 steps = 52, shift = 2.14, angle = 0.0248 degrees 
    11292  
    11293 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11294 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11295 Matrix rotation and translation 
    11296 0.99934420 0.03620463 0.00052381 225.71455776 
    11297 0.02808192 -0.78410608 0.61999115 152.29675045 
    11298 0.02285726 -0.61956984 -0.78460860 174.08687586 
    11299 Axis -0.99981627 -0.01801392 -0.00655169 
    11300 Axis point 0.00000000 104.09306589 60.56787966 
    11301 Rotation angle (degrees) 141.69157698 
    11302 Shift along axis -229.55711192 
    11303  
    11304 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    11305 
    11306 > fitmap #13 inMap #10 resolution 15 metric correlation
    11307 
    11308 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11309 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11310 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11311 steps = 44, shift = 0.0537, angle = 0.0254 degrees 
    11312  
    11313 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11314 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11315 Matrix rotation and translation 
    11316 0.99933940 0.03633837 0.00039366 225.67229147 
    11317 0.02827668 -0.78434878 0.61967523 152.30875518 
    11318 0.02282675 -0.61925474 -0.78485821 174.12027029 
    11319 Axis -0.99981495 -0.01810347 -0.00650577 
    11320 Axis point 0.00000000 104.07765303 60.60788213 
    11321 Rotation angle (degrees) 141.71455601 
    11322 Shift along axis -229.52063590 
    11323  
    11324 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11325 
    11326 > fitmap #13 inMap #10 resolution 15 metric correlation
    11327 
    11328 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11329 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11330 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11331 steps = 40, shift = 0.00391, angle = 0.0184 degrees 
    11332  
    11333 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11334 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11335 Matrix rotation and translation 
    11336 0.99934011 0.03631725 0.00053394 225.66809806 
    11337 0.02817982 -0.78453042 0.61944967 152.29888864 
    11338 0.02291560 -0.61902585 -0.78503616 174.13333989 
    11339 Axis -0.99981517 -0.01806860 -0.00656931 
    11340 Axis point 0.00000000 104.06241355 60.61961728 
    11341 Rotation angle (degrees) 141.73115307 
    11342 Shift along axis -229.52215074 
    11343  
    11344 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    11345 
    11346 > fitmap #13 inMap #10 resolution 15 metric correlation
    11347 
    11348 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11349 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11350 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11351 steps = 40, shift = 0.00182, angle = 0.0123 degrees 
    11352  
    11353 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11354 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11355 Matrix rotation and translation 
    11356 0.99933390 0.03648552 0.00066627 225.67315512 
    11357 0.02822999 -0.78452835 0.61945000 152.29876439 
    11358 0.02312365 -0.61901857 -0.78503580 174.13855728 
    11359 Axis -0.99981343 -0.01812981 -0.00666467 
    11360 Axis point 0.00000000 104.05237152 60.61408320 
    11361 Rotation angle (degrees) 141.73132777 
    11362 Shift along axis -229.55277377 
    11363  
    11364 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11365 
    11366 > fitmap #13 inMap #10 resolution 15 metric correlation
    11367 
    11368 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11369 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11370 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11371 steps = 92, shift = 18.8, angle = 0.0119 degrees 
    11372  
    11373 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11374 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11375 Matrix rotation and translation 
    11376 0.99934044 0.03630748 0.00056766 225.67589855 
    11377 0.02815037 -0.78450702 0.61948064 152.29633231 
    11378 0.02293711 -0.61905608 -0.78501170 174.12878939 
    11379 Axis -0.99981526 -0.01805785 -0.00658487 
    11380 Axis point 0.00000000 104.06273787 60.61399074 
    11381 Rotation angle (degrees) 141.72892351 
    11382 Shift along axis -229.53096698 
    11383  
    11384 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11385 
    11386 > fitmap #13 inMap #10 resolution 15 metric correlation
    11387 
    11388 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11389 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11390 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11391 steps = 100, shift = 22.3, angle = 0.0429 degrees 
    11392  
    11393 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11394 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11395 Matrix rotation and translation 
    11396 0.99933967 0.03633131 0.00036512 225.71495933 
    11397 0.02827805 -0.78405596 0.62004562 152.30802937 
    11398 0.02281333 -0.61962586 -0.78456564 174.08512574 
    11399 Axis -0.99981500 -0.01810485 -0.00649508 
    11400 Axis point 0.00000000 104.09387610 60.57207437 
    11401 Rotation angle (degrees) 141.68748489 
    11402 Shift along axis -229.56141225 
    11403  
    11404 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11405 
    11406 > fitmap #13 inMap #10 resolution 15 metric correlation
    11407 
    11408 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11409 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11410 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11411 steps = 56, shift = 1.02, angle = 0.0125 degrees 
    11412  
    11413 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11414 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11415 Matrix rotation and translation 
    11416 0.99934059 0.03630518 0.00043476 225.71049554 
    11417 0.02821909 -0.78418543 0.61988456 152.30189784 
    11418 0.02284594 -0.61946353 -0.78469287 174.09470601 
    11419 Axis -0.99981527 -0.01807970 -0.00652327 
    11420 Axis point 0.00000000 104.08424781 60.58232121 
    11421 Rotation angle (degrees) 141.69930532 
    11422 Shift along axis -229.55803901 
    11423  
    11424 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11425 
    11426 > scalebar off
    11427 
    11428 > scalebar 50
    11429 
    11430 > movie record
    11431 
    11432 > turn y 2 180
    11433 
    11434 > wait 180
    11435 
    11436 > movie encode /Users/francescappadoo/Desktop/movie14.mp4
    11437 
    11438 Movie saved to /Users/francescappadoo/Desktop/movie14.mp4 
    11439  
    11440 
    11441 > fitmap #13 inMap #10 resolution 15 metric correlation
    11442 
    11443 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11444 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11445 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11446 steps = 44, shift = 0.0329, angle = 0.0218 degrees 
    11447  
    11448 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11449 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11450 Matrix rotation and translation 
    11451 0.99934213 0.03626278 0.00044796 225.67875121 
    11452 0.02818625 -0.78442053 0.61958853 152.30007496 
    11453 0.02281939 -0.61916829 -0.78492663 174.12001234 
    11454 Axis -0.99981572 -0.01805625 -0.00651867 
    11455 Axis point 0.00000000 104.07263774 60.61053136 
    11456 Rotation angle (degrees) 141.72091129 
    11457 Shift along axis -229.52216263 
    11458  
    11459 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    11460 
    11461 > fitmap #13 inMap #10 resolution 15 metric correlation
    11462 
    11463 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11464 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11465 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11466 steps = 44, shift = 0.0601, angle = 0.0402 degrees 
    11467  
    11468 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11469 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11470 Matrix rotation and translation 
    11471 0.99934136 0.03628487 0.00036453 225.73565493 
    11472 0.02823938 -0.78398663 0.62013504 152.30285932 
    11473 0.02278730 -0.61971630 -0.78449497 174.07178380 
    11474 Axis -0.99981546 -0.01808171 -0.00648788 
    11475 Axis point 0.00000000 104.09718084 60.56144283 
    11476 Rotation angle (degrees) 141.68093746 
    11477 Shift along axis -229.57725079 
    11478  
    11479 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    11480 
    11481 > view matrix models
    11482 > #13,0.50526,0.83445,0.22,149.94,-0.76052,0.55105,-0.34345,92.415,-0.40782,0.0062201,0.91304,-282.49
    11483 
    11484 > fitmap #13 inMap #10 resolution 15 metric correlation
    11485 
    11486 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11487 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11488 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11489 steps = 40, shift = 0.0908, angle = 0.988 degrees 
    11490  
    11491 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11492 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11493 Matrix rotation and translation 
    11494 0.99933828 0.03636829 0.00047986 225.67395774 
    11495 0.02824611 -0.78433158 0.61969839 152.30534568 
    11496 0.02291373 -0.61927477 -0.78483987 174.12294567 
    11497 Axis -0.99981464 -0.01810347 -0.00655436 
    11498 Axis point 0.00000000 104.07580288 60.60319318 
    11499 Rotation angle (degrees) 141.71296481 
    11500 Shift along axis -229.53064520 
    11501  
    11502 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11503 
    11504 > ui mousemode right "translate selected models"
    11505 
    11506 > view matrix models
    11507 > #13,0.50211,0.83373,0.22974,149.89,-0.75405,0.55215,-0.35572,92.143,-0.42343,0.0053757,0.90591,-279.69
    11508 
    11509 > fitmap #13 inMap #10
    11510 
    11511 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11512 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11513 average map value = 0.5224, steps = 48 
    11514 shifted from previous position = 2.91 
    11515 rotated from previous position = 1.59 degrees 
    11516 atoms outside contour = 7718, contour level = 0.39813 
    11517  
    11518 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11519 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11520 Matrix rotation and translation 
    11521 0.99976891 0.01424379 -0.01609736 225.34517496 
    11522 0.02116570 -0.78286239 0.62183475 152.73496254 
    11523 -0.00374474 -0.62203176 -0.78298299 173.30095979 
    11524 Axis -0.99993521 -0.00993018 0.00556448 
    11525 Axis point 0.00000000 105.69585518 61.02789320 
    11526 Rotation angle (degrees) 141.53960222 
    11527 Shift along axis -225.88293196 
    11528  
    11529 
    11530 > fitmap #13 inMap #10
    11531 
    11532 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11533 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11534 average map value = 0.5224, steps = 40 
    11535 shifted from previous position = 0.0223 
    11536 rotated from previous position = 0.0265 degrees 
    11537 atoms outside contour = 7718, contour level = 0.39813 
    11538  
    11539 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11540 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11541 Matrix rotation and translation 
    11542 0.99976305 0.01414784 -0.01653940 225.32770914 
    11543 0.02136512 -0.78292170 0.62175325 152.73864345 
    11544 -0.00415260 -0.62195930 -0.78303850 173.30437622 
    11545 Axis -0.99993357 -0.00995887 0.00580263 
    11546 Axis point 0.00000000 105.69977066 61.06083200 
    11547 Rotation angle (degrees) 141.54516065 
    11548 Shift along axis -225.82822468 
    11549  
    11550 
    11551 > view matrix models
    11552 > #13,0.52431,0.82304,0.21843,150.89,-0.74755,0.56772,-0.34477,92.521,-0.40776,0.017477,0.91292,-277.74
    11553 
    11554 > view matrix models
    11555 > #13,0.52431,0.82304,0.21843,150.25,-0.74755,0.56772,-0.34477,92.324,-0.40776,0.017477,0.91292,-278.75
    11556 
    11557 > fitmap #13 inMap #10
    11558 
    11559 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11560 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11561 average map value = 0.5224, steps = 64 
    11562 shifted from previous position = 3.13 
    11563 rotated from previous position = 0.0144 degrees 
    11564 atoms outside contour = 7718, contour level = 0.39813 
    11565  
    11566 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11567 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11568 Matrix rotation and translation 
    11569 0.99976641 0.01417159 -0.01631428 225.32908177 
    11570 0.02124413 -0.78285658 0.62183940 152.73660214 
    11571 -0.00395929 -0.62204072 -0.78297482 173.30410211 
    11572 Axis -0.99993451 -0.00993197 0.00568550 
    11573 Axis point 0.00000000 105.70230647 61.04236777 
    11574 Rotation angle (degrees) 141.53907259 
    11575 Shift along axis -225.84598023 
    11576  
    11577 
    11578 > fitmap #13 inMap #10
    11579 
    11580 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11581 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11582 average map value = 0.5224, steps = 60 
    11583 shifted from previous position = 0.0538 
    11584 rotated from previous position = 0.03 degrees 
    11585 atoms outside contour = 7719, contour level = 0.39813 
    11586  
    11587 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11588 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11589 Matrix rotation and translation 
    11590 0.99976546 0.01458885 -0.01600230 225.38684086 
    11591 0.02137695 -0.78282433 0.62187544 152.75010630 
    11592 -0.00345455 -0.62207166 -0.78295263 173.29127175 
    11593 Axis -0.99993424 -0.01008638 0.00545654 
    11594 Axis point 0.00000000 105.68233836 61.01243304 
    11595 Rotation angle (degrees) 141.53660974 
    11596 Shift along axis -225.96714530 
    11597  
    11598 
    11599 > fitmap #13 inMap #10
    11600 
    11601 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11602 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11603 average map value = 0.5224, steps = 44 
    11604 shifted from previous position = 0.00739 
    11605 rotated from previous position = 0.0153 degrees 
    11606 atoms outside contour = 7719, contour level = 0.39813 
    11607  
    11608 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11609 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11610 Matrix rotation and translation 
    11611 0.99976640 0.01453934 -0.01598854 225.37866580 
    11612 0.02133053 -0.78266198 0.62208134 152.74857005 
    11613 -0.00346898 -0.62227707 -0.78278932 173.28321178 
    11614 Axis -0.99993450 -0.01006040 0.00545723 
    11615 Axis point 0.00000000 105.69598924 60.99660935 
    11616 Rotation angle (degrees) 141.52157011 
    11617 Shift along axis -225.95496942 
    11618  
    11619 
    11620 > fitmap #13 inMap #10
    11621 
    11622 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11623 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11624 average map value = 0.5224, steps = 40 
    11625 shifted from previous position = 0.0102 
    11626 rotated from previous position = 0.00501 degrees 
    11627 atoms outside contour = 7719, contour level = 0.39813 
    11628  
    11629 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11630 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11631 Matrix rotation and translation 
    11632 0.99976688 0.01456001 -0.01593940 225.38598927 
    11633 0.02131589 -0.78270536 0.62202726 152.74644643 
    11634 -0.00341914 -0.62222202 -0.78283330 173.27985245 
    11635 Axis -0.99993464 -0.01006184 0.00542933 
    11636 Axis point 0.00000000 105.68963219 60.99520527 
    11637 Rotation angle (degrees) 141.52557024 
    11638 Shift along axis -225.96737471 
    11639  
    11640 
    11641 > fitmap #13 inMap #10
    11642 
    11643 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11644 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11645 average map value = 0.5224, steps = 40 
    11646 shifted from previous position = 0.00349 
    11647 rotated from previous position = 0.022 degrees 
    11648 atoms outside contour = 7718, contour level = 0.39813 
    11649  
    11650 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11651 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11652 Matrix rotation and translation 
    11653 0.99977193 0.01461030 -0.01557269 225.38608629 
    11654 0.02112678 -0.78277048 0.62195177 152.74059387 
    11655 -0.00310295 -0.62213892 -0.78290066 173.29429485 
    11656 Axis -0.99993606 -0.01002254 0.00523761 
    11657 Axis point 0.00000000 105.68106779 60.98469768 
    11658 Rotation angle (degrees) 141.53143799 
    11659 Shift along axis -225.99487461 
    11660  
    11661 
    11662 > view matrix models
    11663 > #13,0.52371,0.82333,0.21875,147.93,-0.74748,0.56729,-0.34562,92.688,-0.40865,0.017494,0.91252,-280.42
    11664 
    11665 > fitmap #13 inMap #10
    11666 
    11667 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11668 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11669 average map value = 0.5224, steps = 68 
    11670 shifted from previous position = 2.38 
    11671 rotated from previous position = 0.0246 degrees 
    11672 atoms outside contour = 7719, contour level = 0.39813 
    11673  
    11674 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11675 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11676 Matrix rotation and translation 
    11677 0.99976651 0.01455817 -0.01596461 225.38127882 
    11678 0.02133038 -0.78266223 0.62208104 152.74901310 
    11679 -0.00343854 -0.62227632 -0.78279005 173.28278244 
    11680 Axis -0.99993453 -0.01006563 0.00544198 
    11681 Axis point 0.00000000 105.69490185 60.99485332 
    11682 Rotation angle (degrees) 141.52161010 
    11683 Shift along axis -225.96103839 
    11684  
    11685 
    11686 > fitmap #13 inMap #10
    11687 
    11688 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11689 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11690 average map value = 0.5224, steps = 44 
    11691 shifted from previous position = 0.0024 
    11692 rotated from previous position = 0.011 degrees 
    11693 atoms outside contour = 7719, contour level = 0.39813 
    11694  
    11695 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11696 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11697 Matrix rotation and translation 
    11698 0.99976566 0.01445057 -0.01611429 225.37764299 
    11699 0.02133910 -0.78269573 0.62203859 152.74773063 
    11700 -0.00362378 -0.62223668 -0.78282072 173.28116762 
    11701 Axis -0.99993430 -0.01003772 0.00553581 
    11702 Axis point 0.00000000 105.69826918 61.00589049 
    11703 Rotation angle (degrees) 141.52460344 
    11704 Shift along axis -225.93682227 
    11705  
    11706 
    11707 > view matrix models
    11708 > #13,0.52396,0.82328,0.21836,150.34,-0.74758,0.56736,-0.34529,92.752,-0.40816,0.017673,0.91274,-278.57
    11709 
    11710 > fitmap #13 inMap #10
    11711 
    11712 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11713 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11714 average map value = 0.5224, steps = 52 
    11715 shifted from previous position = 3.26 
    11716 rotated from previous position = 0.0129 degrees 
    11717 atoms outside contour = 7719, contour level = 0.39813 
    11718  
    11719 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11720 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11721 Matrix rotation and translation 
    11722 0.99977013 0.01437754 -0.01590100 225.36878143 
    11723 0.02114921 -0.78269861 0.62204144 152.75016839 
    11724 -0.00350227 -0.62223475 -0.78282281 173.27249534 
    11725 Axis -0.99993555 -0.00996397 0.00544190 
    11726 Axis point 0.00000000 105.70256853 60.98765720 
    11727 Rotation angle (degrees) 141.52462669 
    11728 Shift along axis -225.93332162 
    11729  
    11730 
    11731 > fitmap #13 inMap #10
    11732 
    11733 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11734 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11735 average map value = 0.5224, steps = 48 
    11736 shifted from previous position = 0.058 
    11737 rotated from previous position = 0.0341 degrees 
    11738 atoms outside contour = 7718, contour level = 0.39813 
    11739  
    11740 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11741 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11742 Matrix rotation and translation 
    11743 0.99976690 0.01411441 -0.01633408 225.32266539 
    11744 0.02121145 -0.78289188 0.62179606 152.73359078 
    11745 -0.00401154 -0.62199759 -0.78300882 173.30698697 
    11746 Axis -0.99993465 -0.00990657 0.00570559 
    11747 Axis point 0.00000000 105.70226182 61.04789548 
    11748 Rotation angle (degrees) 141.54224236 
    11749 Shift along axis -225.83218823 
    11750  
    11751 
    11752 > fitmap #13 inMap #10 resolution 15 metric correlation
    11753 
    11754 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11755 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11756 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11757 steps = 40, shift = 0.628, angle = 1.6 degrees 
    11758  
    11759 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11760 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11761 Matrix rotation and translation 
    11762 0.99934087 0.03629771 0.00042913 225.71358306 
    11763 0.02821605 -0.78416758 0.61990727 152.30161403 
    11764 0.02283771 -0.61948656 -0.78467493 174.09213335 
    11765 Axis -0.99981534 -0.01807694 -0.00651945 
    11766 Axis point 0.00000000 104.08549729 60.58019604 
    11767 Rotation angle (degrees) 141.69763906 
    11768 Shift along axis -229.56003548 
    11769  
    11770 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    11771 
    11772 > fitmap #13 inMap #10 resolution 15 metric correlation
    11773 
    11774 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11775 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11776 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11777 steps = 44, shift = 0.024, angle = 0.0154 degrees 
    11778  
    11779 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11780 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11781 Matrix rotation and translation 
    11782 0.99934083 0.03630044 0.00022393 225.73667387 
    11783 0.02834138 -0.78405540 0.62004343 152.31188379 
    11784 0.02268342 -0.61962837 -0.78456743 174.07013110 
    11785 Axis -0.99981532 -0.01811394 -0.00641911 
    11786 Axis point 0.00000000 104.09498244 60.57281782 
    11787 Rotation angle (degrees) 141.68748768 
    11788 Shift along axis -229.57132942 
    11789  
    11790 Average map value = 0.5205 for 10778 atoms, 7673 outside contour 
    11791 
    11792 > ui mousemode right "rotate selected models"
    11793 
    11794 > view matrix models
    11795 > #13,0.022252,0.95882,0.28316,141.94,-0.76277,0.19937,-0.61516,83.752,-0.64628,-0.2023,0.7358,-293.03
    11796 
    11797 > fitmap #13 inMap #10
    11798 
    11799 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11800 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11801 average map value = 0.5176, steps = 212 
    11802 shifted from previous position = 15.5 
    11803 rotated from previous position = 43.8 degrees 
    11804 atoms outside contour = 7519, contour level = 0.39813 
    11805  
    11806 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11807 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11808 Matrix rotation and translation 
    11809 0.57138224 0.33587311 0.74880671 205.59828939 
    11810 -0.51449111 -0.56426264 0.64568301 136.57487571 
    11811 0.63939120 -0.75418621 -0.14960592 184.93604869 
    11812 Axis -0.85276673 0.06665330 -0.51802147 
    11813 Axis point 0.00000000 91.39193496 -17.15813926 
    11814 Rotation angle (degrees) 124.83696130 
    11815 Shift along axis -262.02505866 
    11816  
    11817 
    11818 > fitmap #13 inMap #10
    11819 
    11820 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11821 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11822 average map value = 0.5176, steps = 40 
    11823 shifted from previous position = 0.0553 
    11824 rotated from previous position = 0.0469 degrees 
    11825 atoms outside contour = 7520, contour level = 0.39813 
    11826  
    11827 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11828 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11829 Matrix rotation and translation 
    11830 0.57093420 0.33544835 0.74933867 205.51042290 
    11831 -0.51490952 -0.56459040 0.64506267 136.56829261 
    11832 0.63945462 -0.75412996 -0.14961841 184.94675313 
    11833 Axis -0.85263968 0.06696112 -0.51819088 
    11834 Axis point 0.00000000 91.42339668 -17.15574725 
    11835 Rotation angle (degrees) 124.86447981 
    11836 Shift along axis -261.91929539 
    11837  
    11838 
    11839 > fitmap #13 inMap #10 resolution 15 metric correlation
    11840 
    11841 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11842 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11843 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    11844 steps = 80, shift = 4.15, angle = 5.29 degrees 
    11845  
    11846 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11847 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11848 Matrix rotation and translation 
    11849 0.60489659 0.37471335 0.70263071 209.46033740 
    11850 -0.51165005 -0.49322824 0.70351979 140.82860635 
    11851 0.61017555 -0.78505778 -0.10662997 179.28307857 
    11852 Axis -0.85799455 0.05328981 -0.51088702 
    11853 Axis point -0.00000000 91.94449566 -25.00651606 
    11854 Rotation angle (degrees) 119.83347176 
    11855 Shift along axis -263.80449601 
    11856  
    11857 Average map value = 0.5058 for 10778 atoms, 7502 outside contour 
    11858 
    11859 > fitmap #13 inMap #10 resolution 15 metric correlation
    11860 
    11861 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11862 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11863 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    11864 steps = 60, shift = 0.0287, angle = 0.0373 degrees 
    11865  
    11866 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11867 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11868 Matrix rotation and translation 
    11869 0.60530809 0.37484018 0.70220856 209.45257728 
    11870 -0.51145383 -0.49282313 0.70394625 140.84690209 
    11871 0.60993194 -0.78525163 -0.10659637 179.26638638 
    11872 Axis -0.85811106 0.05317197 -0.51070358 
    11873 Axis point -0.00000000 91.95667801 -24.99966694 
    11874 Rotation angle (degrees) 119.80539800 
    11875 Shift along axis -263.79645174 
    11876  
    11877 Average map value = 0.5059 for 10778 atoms, 7505 outside contour 
    11878 
    11879 > fitmap #13 inMap #10 resolution 15 metric correlation
    11880 
    11881 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11882 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11883 correlation = 0.4664, correlation about mean = 0.2127, overlap = 203.9 
    11884 steps = 48, shift = 0.0528, angle = 0.0342 degrees 
    11885  
    11886 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11887 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11888 Matrix rotation and translation 
    11889 0.60509058 0.37531340 0.70214325 209.51691939 
    11890 -0.51117842 -0.49298365 0.70403389 140.84256643 
    11891 0.61037848 -0.78492476 -0.10644764 179.29058708 
    11892 Axis -0.85803817 0.05288104 -0.51085624 
    11893 Axis point 0.00000000 91.89424146 -25.00190151 
    11894 Rotation angle (degrees) 119.81296905 
    11895 Shift along axis -263.91732805 
    11896  
    11897 Average map value = 0.5057 for 10778 atoms, 7500 outside contour 
    11898 
    11899 > view matrix models
    11900 > #13,0.30284,0.90345,0.30343,146.27,-0.751,0.42224,-0.50766,90.004,-0.58676,-0.074139,0.80636,-287.86
    11901 
    11902 > fitmap #13 inMap #10
    11903 
    11904 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    11905 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    11906 average map value = 0.5224, steps = 96 
    11907 shifted from previous position = 1 
    11908 rotated from previous position = 16.3 degrees 
    11909 atoms outside contour = 7720, contour level = 0.39813 
    11910  
    11911 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    11912 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11913 Matrix rotation and translation 
    11914 0.99976672 0.01448907 -0.01601256 225.37547631 
    11915 0.02130605 -0.78268431 0.62205404 152.74671807 
    11916 -0.00351980 -0.62225014 -0.78281045 173.28427877 
    11917 Axis -0.99993460 -0.01003930 0.00547819 
    11918 Axis point 0.00000000 105.69675926 61.00043735 
    11919 Rotation angle (degrees) 141.52355783 
    11920 Shift along axis -225.94492184 
    11921  
    11922 
    11923 > view matrix models
    11924 > #13,0.39716,0.88423,0.24575,148.58,-0.78292,0.46616,-0.41199,89.34,-0.47885,-0.02878,0.87742,-284.63
    11925 
    11926 > fitmap #13 inMap #10 resolution 15 metric correlation
    11927 
    11928 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11929 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11930 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11931 steps = 76, shift = 0.604, angle = 7.06 degrees 
    11932  
    11933 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11934 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11935 Matrix rotation and translation 
    11936 0.99934261 0.03624853 0.00047611 225.67883327 
    11937 0.02815836 -0.78443999 0.61956511 152.29806193 
    11938 0.02283180 -0.61914445 -0.78494502 174.12065106 
    11939 Axis -0.99981587 -0.01804424 -0.00652992 
    11940 Axis point 0.00000000 104.07118381 60.61070932 
    11941 Rotation angle (degrees) 141.72264157 
    11942 Shift along axis -229.52237511 
    11943  
    11944 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    11945 
    11946 > fitmap #13 inMap #10 resolution 15 metric correlation
    11947 
    11948 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11949 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11950 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11951 steps = 44, shift = 0.0531, angle = 0.0384 degrees 
    11952  
    11953 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11954 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11955 Matrix rotation and translation 
    11956 0.99934077 0.03630035 0.00037955 225.73070851 
    11957 0.02824375 -0.78402665 0.62008419 152.30350313 
    11958 0.02280685 -0.61966474 -0.78453507 174.07655727 
    11959 Axis -0.99981531 -0.01808685 -0.00649738 
    11960 Axis point 0.00000000 104.09427443 60.56555886 
    11961 Rotation angle (degrees) 141.68466927 
    11962 Shift along axis -229.57474985 
    11963  
    11964 Average map value = 0.5204 for 10778 atoms, 7673 outside contour 
    11965 
    11966 > fitmap #13 inMap #10 resolution 15 metric correlation
    11967 
    11968 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11969 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11970 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    11971 steps = 44, shift = 0.0239, angle = 0.00981 degrees 
    11972  
    11973 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11974 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11975 Matrix rotation and translation 
    11976 0.99933718 0.03639959 0.00032961 225.72544173 
    11977 0.02835552 -0.78410334 0.61998212 152.31868989 
    11978 0.02282554 -0.61956188 -0.78461576 174.06446737 
    11979 Axis -0.99981431 -0.01814519 -0.00648833 
    11980 Axis point 0.00000000 104.08733857 60.56560921 
    11981 Rotation angle (degrees) 141.69210743 
    11982 Shift along axis -229.57676608 
    11983  
    11984 Average map value = 0.5205 for 10778 atoms, 7673 outside contour 
    11985 
    11986 > fitmap #13 inMap #10 resolution 15 metric correlation
    11987 
    11988 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    11989 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    11990 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    11991 steps = 44, shift = 0.0496, angle = 0.0147 degrees 
    11992  
    11993 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    11994 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    11995 Matrix rotation and translation 
    11996 0.99933810 0.03637262 0.00047529 225.68916864 
    11997 0.02824891 -0.78423722 0.61981763 152.30722463 
    11998 0.02291713 -0.61939399 -0.78474564 174.11041578 
    11999 Axis -0.99981458 -0.01810641 -0.00655433 
    12000 Axis point 0.00000000 104.08143261 60.59041074 
    12001 Rotation angle (degrees) 141.70425615 
    12002 Shift along axis -229.54623721 
    12003  
    12004 Average map value = 0.5204 for 10778 atoms, 7669 outside contour 
    12005 
    12006 > view matrix models
    12007 > #13,0.55509,0.80335,0.21565,150.07,-0.73398,0.59504,-0.32741,94.37,-0.39135,0.023456,0.91994,-281.59
    12008 
    12009 > fitmap #13 inMap #10 resolution 15 metric correlation
    12010 
    12011 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12012 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12013 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12014 steps = 48, shift = 0.233, angle = 3.74 degrees 
    12015  
    12016 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12017 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12018 Matrix rotation and translation 
    12019 0.99934045 0.03630856 0.00042885 225.67645892 
    12020 0.02823250 -0.78437629 0.61964238 152.30475152 
    12021 0.02283470 -0.61922163 -0.78488405 174.11935818 
    12022 Axis -0.99981525 -0.01808246 -0.00651772 
    12023 Axis point 0.00000000 104.07529586 60.60769314 
    12024 Rotation angle (degrees) 141.71697620 
    12025 Shift along axis -229.52367193 
    12026  
    12027 Average map value = 0.5204 for 10778 atoms, 7668 outside contour 
    12028 
    12029 > fitmap #13 inMap #10 resolution 15 metric correlation
    12030 
    12031 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12032 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12033 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    12034 steps = 44, shift = 0.0643, angle = 0.0342 degrees 
    12035  
    12036 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12037 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12038 Matrix rotation and translation 
    12039 0.99934135 0.03628436 0.00037291 225.73517793 
    12040 0.02823462 -0.78400793 0.62010828 152.30223868 
    12041 0.02279259 -0.61968936 -0.78451604 174.07358927 
    12042 Axis -0.99981547 -0.01808001 -0.00649159 
    12043 Axis point 0.00000000 104.09557788 60.56338855 
    12044 Rotation angle (degrees) 141.68289786 
    12045 Shift along axis -229.57716250 
    12046  
    12047 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    12048 
    12049 > fitmap #13 inMap #10 resolution 15 metric correlation
    12050 
    12051 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12052 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12053 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12054 steps = 40, shift = 0.0508, angle = 0.0309 degrees 
    12055  
    12056 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12057 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12058 Matrix rotation and translation 
    12059 0.99933738 0.03639177 0.00051638 225.69117381 
    12060 0.02824167 -0.78432335 0.61970897 152.30355252 
    12061 0.02295731 -0.61928380 -0.78483142 174.11622379 
    12062 Axis -0.99981439 -0.01810888 -0.00657679 
    12063 Axis point 0.00000000 104.07267584 60.59730554 
    12064 Rotation angle (degrees) 141.71223661 
    12065 Shift along axis -229.55245552 
    12066  
    12067 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    12068 
    12069 > fitmap #13 inMap #10 resolution 15 metric correlation
    12070 
    12071 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12072 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12073 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    12074 steps = 36, shift = 0.035, angle = 0.0292 degrees 
    12075  
    12076 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12077 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12078 Matrix rotation and translation 
    12079 0.99934023 0.03631531 0.00035213 225.72218088 
    12080 0.02827250 -0.78402643 0.62008317 152.30712006 
    12081 0.02279459 -0.61966415 -0.78453590 174.08042203 
    12082 Axis -0.99981516 -0.01809910 -0.00648626 
    12083 Axis point 0.00000000 104.09586252 60.56864115 
    12084 Rotation angle (degrees) 141.68472157 
    12085 Shift along axis -229.56620978 
    12086  
    12087 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    12088 
    12089 > fitmap #13 inMap #10 resolution 15 metric correlation
    12090 
    12091 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12092 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12093 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12094 steps = 28, shift = 0.0632, angle = 0.0393 degrees 
    12095  
    12096 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12097 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12098 Matrix rotation and translation 
    12099 0.99933330 0.03650663 0.00022088 225.67267678 
    12100 0.02851864 -0.78441758 0.61957700 152.31904665 
    12101 0.02279192 -0.61915767 -0.78493575 174.12511914 
    12102 Axis -0.99981326 -0.01821765 -0.00644730 
    12103 Axis point 0.00000000 104.06716763 60.62475325 
    12104 Rotation angle (degrees) 141.72160707 
    12105 Shift along axis -229.52806584 
    12106  
    12107 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    12108 
    12109 > fitmap #13 inMap #10 resolution 15 metric correlation
    12110 
    12111 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12112 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12113 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12114 steps = 48, shift = 0.00882, angle = 0.0205 degrees 
    12115  
    12116 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12117 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12118 Matrix rotation and translation 
    12119 0.99934190 0.03626809 0.00048146 225.66456545 
    12120 0.02817145 -0.78446766 0.61952947 152.30043689 
    12121 0.02284684 -0.61910824 -0.78497314 174.13005580 
    12122 Axis -0.99981567 -0.01805311 -0.00653553 
    12123 Axis point 0.00000000 104.07072119 60.61661747 
    12124 Rotation angle (degrees) 141.72525501 
    12125 Shift along axis -229.51049649 
    12126  
    12127 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    12128 
    12129 > fitmap #13 inMap #10 resolution 15 metric correlation
    12130 
    12131 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12132 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12133 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    12134 steps = 44, shift = 0.0584, angle = 0.0313 degrees 
    12135  
    12136 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12137 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12138 Matrix rotation and translation 
    12139 0.99934096 0.03629433 0.00044126 225.71902419 
    12140 0.02820451 -0.78412923 0.61995627 152.30107705 
    12141 0.02284690 -0.61953529 -0.78463614 174.08757346 
    12142 Axis -0.99981537 -0.01807314 -0.00652552 
    12143 Axis point 0.00000000 104.08757922 60.57458872 
    12144 Rotation angle (degrees) 141.69407070 
    12145 Shift along axis -229.56592041 
    12146  
    12147 Average map value = 0.5204 for 10778 atoms, 7671 outside contour 
    12148 
    12149 > ui mousemode right "translate selected models"
    12150 
    12151 > view matrix models
    12152 > #13,0.50218,0.83377,0.22945,151.33,-0.75402,0.55209,-0.35588,94.324,-0.4234,0.0057059,0.90592,-282.03
    12153 
    12154 > fitmap #13 inMap #10 resolution 15 metric correlation
    12155 
    12156 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12157 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12158 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12159 steps = 44, shift = 2.37, angle = 0.0278 degrees 
    12160  
    12161 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12162 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12163 Matrix rotation and translation 
    12164 0.99934152 0.03627862 0.00047019 225.67585839 
    12165 0.02818532 -0.78443013 0.61957636 152.30043623 
    12166 0.02284621 -0.61915518 -0.78493614 174.12273828 
    12167 Axis -0.99981556 -0.01806032 -0.00653233 
    12168 Axis point 0.00000000 104.07154710 60.61111908 
    12169 Rotation angle (degrees) 141.72182525 
    12170 Shift along axis -229.52225682 
    12171  
    12172 Average map value = 0.5204 for 10778 atoms, 7670 outside contour 
    12173 
    12174 > view matrix models
    12175 > #13,0.50219,0.83365,0.22986,154.15,-0.75401,0.55227,-0.35562,96.822,-0.42341,0.0052732,0.90592,-280.31
    12176 
    12177 > fitmap #13 inMap #10
    12178 
    12179 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12180 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12181 average map value = 0.5224, steps = 72 
    12182 shifted from previous position = 6.93 
    12183 rotated from previous position = 1.57 degrees 
    12184 atoms outside contour = 7719, contour level = 0.39813 
    12185  
    12186 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12187 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12188 Matrix rotation and translation 
    12189 0.99976681 0.01453517 -0.01596528 225.38193172 
    12190 0.02131282 -0.78266691 0.62207570 152.74800703 
    12191 -0.00345352 -0.62227095 -0.78279420 173.28221415 
    12192 Axis -0.99993462 -0.01005422 0.00544640 
    12193 Axis point 0.00000000 105.69541522 60.99508453 
    12194 Rotation angle (degrees) 141.52200473 
    12195 Shift along axis -225.95919550 
    12196  
    12197 
    12198 > view matrix models
    12199 > #13,0.52385,0.82333,0.2184,153.39,-0.74758,0.56728,-0.34542,96.637,-0.4083,0.017677,0.91268,-280.87
    12200 
    12201 > fitmap #13 inMap #10
    12202 
    12203 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12204 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12205 average map value = 0.5224, steps = 56 
    12206 shifted from previous position = 5.31 
    12207 rotated from previous position = 0.00731 degrees 
    12208 atoms outside contour = 7719, contour level = 0.39813 
    12209  
    12210 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12211 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12212 Matrix rotation and translation 
    12213 0.99976689 0.01444038 -0.01604588 225.38119838 
    12214 0.02128867 -0.78268496 0.62205383 152.74655959 
    12215 -0.00357618 -0.62225046 -0.78280994 173.27854584 
    12216 Axis -0.99993465 -0.01002077 0.00550335 
    12217 Axis point 0.00000000 105.69872944 60.99971643 
    12218 Rotation angle (degrees) 141.52355641 
    12219 Shift along axis -225.94349468 
    12220  
    12221 
    12222 > view matrix models
    12223 > #13,0.52395,0.82328,0.21838,152.75,-0.74755,0.56736,-0.34535,94.64,-0.40822,0.017693,0.91271,-279.15
    12224 
    12225 > fitmap #13 inMap #10
    12226 
    12227 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12228 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12229 average map value = 0.5224, steps = 56 
    12230 shifted from previous position = 4.35 
    12231 rotated from previous position = 0.00896 degrees 
    12232 atoms outside contour = 7718, contour level = 0.39813 
    12233  
    12234 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12235 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12236 Matrix rotation and translation 
    12237 0.99976676 0.01455336 -0.01595177 225.38487219 
    12238 0.02131874 -0.78265144 0.62209496 152.74878708 
    12239 -0.00343111 -0.62228998 -0.78277917 173.28046094 
    12240 Axis -0.99993461 -0.01006107 0.00543637 
    12241 Axis point 0.00000000 105.69552054 60.99219669 
    12242 Rotation angle (degrees) 141.52060281 
    12243 Shift along axis -225.96493404 
    12244  
    12245 
    12246 > fitmap #13 inMap #10
    12247 
    12248 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12249 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12250 average map value = 0.5224, steps = 40 
    12251 shifted from previous position = 0.055 
    12252 rotated from previous position = 0.0369 degrees 
    12253 atoms outside contour = 7718, contour level = 0.39813 
    12254  
    12255 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12256 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12257 Matrix rotation and translation 
    12258 0.99976775 0.01410209 -0.01629140 225.32716550 
    12259 0.02117561 -0.78284607 0.62185492 152.73458251 
    12260 -0.00398421 -0.62205552 -0.78296289 173.30603642 
    12261 Axis -0.99993489 -0.00989331 0.00568615 
    12262 Axis point 0.00000000 105.70694011 61.04142291 
    12263 Rotation angle (degrees) 141.53797941 
    12264 Shift along axis -225.83810140 
    12265  
    12266 
    12267 > fitmap #13 inMap #10
    12268 
    12269 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12270 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12271 average map value = 0.5224, steps = 40 
    12272 shifted from previous position = 0.00852 
    12273 rotated from previous position = 0.0144 degrees 
    12274 atoms outside contour = 7720, contour level = 0.39813 
    12275  
    12276 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12277 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12278 Matrix rotation and translation 
    12279 0.99976778 0.01417892 -0.01622238 225.33253529 
    12280 0.02119371 -0.78270365 0.62203355 152.73556248 
    12281 -0.00387755 -0.62223296 -0.78282241 173.29345245 
    12282 Axis -0.99993490 -0.00992072 0.00563733 
    12283 Axis point 0.00000000 105.71134748 61.02098799 
    12284 Rotation angle (degrees) 141.52495015 
    12285 Shift along axis -225.85620003 
    12286  
    12287 
    12288 > fitmap #13 inMap #10 resolution 15 metric correlation
    12289 
    12290 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12291 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12292 correlation = 0.4591, correlation about mean = 0.2019, overlap = 206.3 
    12293 steps = 48, shift = 0.417, angle = 0.604 degrees 
    12294  
    12295 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12296 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12297 Matrix rotation and translation 
    12298 0.99934054 0.03630649 0.00038852 225.67641663 
    12299 0.02825482 -0.78434715 0.61967825 152.30677591 
    12300 0.02280308 -0.61925867 -0.78485575 174.11706652 
    12301 Axis -0.99981528 -0.01808843 -0.00649766 
    12302 Axis point 0.00000000 104.07828430 60.60676269 
    12303 Rotation angle (degrees) 141.71431592 
    12304 Shift along axis -229.52107271 
    12305  
    12306 Average map value = 0.5204 for 10778 atoms, 7668 outside contour 
    12307 
    12308 > fitmap #13 inMap #10 resolution 15 metric correlation
    12309 
    12310 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    12311 cryosparc_P12_J2769_004_volume_map.mrc using 2552 points 
    12312 correlation = 0.4591, correlation about mean = 0.202, overlap = 206.3 
    12313 steps = 44, shift = 0.0647, angle = 0.0309 degrees 
    12314  
    12315 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    12316 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12317 Matrix rotation and translation 
    12318 0.99934147 0.03628101 0.00037821 225.73473646 
    12319 0.02822891 -0.78401363 0.62010134 152.30186299 
    12320 0.02279443 -0.61968236 -0.78452152 174.07382534 
    12321 Axis -0.99981550 -0.01807741 -0.00649356 
    12322 Axis point 0.00000000 104.09521791 60.56361625 
    12323 Rotation angle (degrees) 141.68340860 
    12324 Shift along axis -229.57667180 
    12325  
    12326 Average map value = 0.5204 for 10778 atoms, 7672 outside contour 
    12327 
    12328 > view matrix models
    12329 > #13,0.50221,0.8338,0.22927,147.71,-0.75403,0.55203,-0.35594,91.356,-0.42335,0.005881,0.90595,-281.09
    12330 
    12331 > fitmap #13 inMap #10
    12332 
    12333 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12334 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12335 average map value = 0.5224, steps = 44 
    12336 shifted from previous position = 2.46 
    12337 rotated from previous position = 1.59 degrees 
    12338 atoms outside contour = 7717, contour level = 0.39813 
    12339  
    12340 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12341 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12342 Matrix rotation and translation 
    12343 0.99976685 0.01423889 -0.01622743 225.33523951 
    12344 0.02124296 -0.78284223 0.62185746 152.73757684 
    12345 -0.00384896 -0.62205724 -0.78296220 173.30336558 
    12346 Axis -0.99993464 -0.00995057 0.00563030 
    12347 Axis point 0.00000000 105.69945478 61.03546731 
    12348 Rotation angle (degrees) 141.53781224 
    12349 Shift along axis -225.86458934 
    12350  
    12351 
    12352 > fitmap #13 inMap #10
    12353 
    12354 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12355 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12356 average map value = 0.5224, steps = 60 
    12357 shifted from previous position = 0.0521 
    12358 rotated from previous position = 0.0272 degrees 
    12359 atoms outside contour = 7718, contour level = 0.39813 
    12360  
    12361 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12362 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12363 Matrix rotation and translation 
    12364 0.99976742 0.01452972 -0.01593178 225.38678563 
    12365 0.02128755 -0.78269680 0.62203897 152.74624765 
    12366 -0.00343170 -0.62223349 -0.78282408 173.28028546 
    12367 Axis -0.99993480 -0.01004544 0.00543080 
    12368 Axis point 0.00000000 105.69222363 60.99435736 
    12369 Rotation angle (degrees) 141.52472825 
    12370 Shift along axis -225.96544261 
    12371  
    12372 
    12373 > fitmap #13 inMap #10
    12374 
    12375 Fit molecule Kendall_Fran_SHAPE_MaP.pdb (#13) to map
    12376 cryosparc_P12_J2769_004_volume_map.mrc (#10) using 10778 atoms 
    12377 average map value = 0.5224, steps = 48 
    12378 shifted from previous position = 0.00526 
    12379 rotated from previous position = 0.00731 degrees 
    12380 atoms outside contour = 7718, contour level = 0.39813 
    12381  
    12382 Position of Kendall_Fran_SHAPE_MaP.pdb (#13) relative to
    12383 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12384 Matrix rotation and translation 
    12385 0.99976672 0.01463801 -0.01587597 225.39421593 
    12386 0.02133772 -0.78267254 0.62206777 152.75109423 
    12387 -0.00331985 -0.62226146 -0.78280233 173.28137390 
    12388 Axis -0.99993460 -0.01009001 0.00538384 
    12389 Axis point 0.00000000 105.68973364 60.98903891 
    12390 Rotation angle (degrees) 141.52264134 
    12391 Shift along axis -225.98781645 
    12392  
    12393 
    12394 > open
    12395 > /Users/francescappadoo/Downloads/cryosparc_P12_J2780_class_00_final_volume.mrc
    12396 
    12397 Opened cryosparc_P12_J2780_class_00_final_volume.mrc as #19, grid size
    12398 128,128,128, pixel 2.92, shown at level 0.0192, step 1, values float32 
    12399 
    12400 > hide #13 models
    12401 
    12402 > select add #13
    12403 
    12404 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    12405 
    12406 > select subtract #13
    12407 
    12408 Nothing selected 
    12409 
    12410 > hide #!10 models
    12411 
    12412 > tile
    12413 
    12414 2 models tiled 
    12415 
    12416 > surface dust #19 size 29.2
    12417 
    12418 > select add #19
    12419 
    12420 2 models selected 
    12421 
    12422 > volume #19 level 0.04245
    12423 
    12424 > tile
    12425 
    12426 2 models tiled 
    12427 
    12428 > volume #19 level 0.1069
    12429 
    12430 > open
    12431 > /Users/francescappadoo/Downloads/cryosparc_P12_J2780_class_00_final_volume.mrc
    12432 
    12433 Opened cryosparc_P12_J2780_class_00_final_volume.mrc as #20, grid size
    12434 128,128,128, pixel 2.92, shown at level 0.0192, step 1, values float32 
    12435 
    12436 > tile
    12437 
    12438 3 models tiled 
    12439 
    12440 > surface dust #19 size 29.2
    12441 
    12442 > select subtract #19
    12443 
    12444 Nothing selected 
    12445 
    12446 > surface dust #19 size 29.2
    12447 
    12448 > surface dust #20 size 29.2
    12449 
    12450 > volume #20 level 0.1404
    12451 
    12452 > tile
    12453 
    12454 3 models tiled 
    12455 
    12456 > close #20
    12457 
    12458 > open
    12459 > /Users/francescappadoo/Downloads/cryosparc_P12_J2780_class_01_final_volume.mrc
    12460 
    12461 Opened cryosparc_P12_J2780_class_01_final_volume.mrc as #20, grid size
    12462 128,128,128, pixel 2.92, shown at level 0.0186, step 1, values float32 
    12463 
    12464 > tile
    12465 
    12466 3 models tiled 
    12467 
    12468 > surface dust #19 size 29.2
    12469 
    12470 > surface dust #20 size 29.2
    12471 
    12472 > volume #20 level 0.08281
    12473 
    12474 > tile
    12475 
    12476 3 models tiled 
    12477 
    12478 > tile
    12479 
    12480 3 models tiled 
    12481 
    12482 > volume #19 level 0.1791
    12483 
    12484 > scalebar off
    12485 
    12486 > scalebar 50
    12487 
    12488 > show #!3 models
    12489 
    12490 > show #!10 models
    12491 
    12492 > hide #!19 models
    12493 
    12494 > hide #!20 models
    12495 
    12496 > tile
    12497 
    12498 3 models tiled 
    12499 
    12500 > select add #10
    12501 
    12502 2 models selected 
    12503 
    12504 > view matrix models
    12505 > #10,0.53221,-0.49737,-0.68511,421.56,-0.73364,-0.67481,-0.080027,439.73,-0.42252,0.54522,-0.72403,181.1
    12506 
    12507 > select subtract #10
    12508 
    12509 Nothing selected 
    12510 
    12511 > fitmap #3 inMap #10
    12512 
    12513 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12514 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12515 correlation = 0.629, correlation about mean = 0.2118, overlap = 2654 
    12516 steps = 172, shift = 47.7, angle = 65.6 degrees 
    12517  
    12518 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12519 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12520 Matrix rotation and translation 
    12521 0.99589877 -0.02448857 0.08709795 -10.71057302 
    12522 -0.06285098 -0.87972635 0.47130818 275.73846156 
    12523 0.06508068 -0.47484941 -0.87765748 435.26516359 
    12524 Axis -0.99890907 0.02324480 -0.04050124 
    12525 Axis point 0.00000000 192.60452361 183.09300743 
    12526 Rotation angle (degrees) 151.73206130 
    12527 Shift along axis -0.52040264 
    12528  
    12529 
    12530 > show #!8 models
    12531 
    12532 > hide #!8 models
    12533 
    12534 > select add #3
    12535 
    12536 2 models selected 
    12537 
    12538 > ui mousemode right "rotate selected models"
    12539 
    12540 > view matrix models
    12541 > #3,0.70806,-0.48272,-0.51539,367.16,-0.62749,-0.76487,-0.14569,457.85,-0.32388,0.42656,-0.84448,212.79
    12542 
    12543 > fitmap #3 inMap #10
    12544 
    12545 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12546 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12547 correlation = 0.7933, correlation about mean = 0.5952, overlap = 3659 
    12548 steps = 88, shift = 23.9, angle = 20.8 degrees 
    12549  
    12550 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12551 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12552 Matrix rotation and translation 
    12553 0.99830286 0.02697477 0.05161266 -12.57566365 
    12554 -0.03784317 0.97411570 0.22286007 -28.99204961 
    12555 -0.04426510 -0.22443501 0.97348324 62.52491046 
    12556 Axis -0.96811947 0.20751653 -0.14029108 
    12557 Axis point 0.00000000 258.32700219 157.66118636 
    12558 Rotation angle (degrees) 13.35667865 
    12559 Shift along axis -2.61327211 
    12560  
    12561 
    12562 > transparency sel 0
    12563 
    12564 > transparency sel 50
    12565 
    12566 > select subtract #3
    12567 
    12568 Nothing selected 
    12569 
    12570 > fitmap #3 inMap #10
    12571 
    12572 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12573 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12574 correlation = 0.7932, correlation about mean = 0.5943, overlap = 3658 
    12575 steps = 72, shift = 17, angle = 0.0796 degrees 
    12576  
    12577 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12578 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12579 Matrix rotation and translation 
    12580 0.99823335 0.02686502 0.05299584 -12.72855023 
    12581 -0.03804471 0.97412042 0.22280509 -28.95982523 
    12582 -0.04563866 -0.22442766 0.97342151 62.78692779 
    12583 Axis -0.96687014 0.21323740 -0.14032799 
    12584 Axis point 0.00000000 259.43131778 157.54802978 
    12585 Rotation angle (degrees) 13.37235923 
    12586 Shift along axis -2.67922579 
    12587  
    12588 
    12589 > fitmap #3 inMap #10
    12590 
    12591 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12592 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12593 correlation = 0.7933, correlation about mean = 0.5952, overlap = 3659 
    12594 steps = 92, shift = 17.8, angle = 0.0443 degrees 
    12595  
    12596 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12597 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12598 Matrix rotation and translation 
    12599 0.99827281 0.02690115 0.05222868 -12.66362966 
    12600 -0.03791113 0.97410706 0.22288628 -28.97842817 
    12601 -0.04488043 -0.22448135 0.97344438 62.65347358 
    12602 Axis -0.96759272 0.21003323 -0.14017977 
    12603 Axis point 0.00000000 258.82392834 157.61724474 
    12604 Rotation angle (degrees) 13.36629232 
    12605 Shift along axis -2.61594672 
    12606  
    12607 
    12608 > fitmap #3 inMap #10
    12609 
    12610 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12611 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12612 correlation = 0.7933, correlation about mean = 0.5947, overlap = 3658 
    12613 steps = 56, shift = 4.16, angle = 0.0641 degrees 
    12614  
    12615 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12616 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12617 Matrix rotation and translation 
    12618 0.99821525 0.02684882 0.05334381 -12.80164604 
    12619 -0.03810858 0.97411120 0.22283451 -28.94250190 
    12620 -0.04597996 -0.22446964 0.97339577 62.86231302 
    12621 Axis -0.96655816 0.21462399 -0.14036334 
    12622 Axis point 0.00000000 259.71750376 157.49360711 
    12623 Rotation angle (degrees) 13.37893089 
    12624 Shift along axis -2.66178400 
    12625  
    12626 
    12627 > fitmap #3 inMap #10
    12628 
    12629 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12630 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12631 correlation = 0.7933, correlation about mean = 0.5952, overlap = 3659 
    12632 steps = 40, shift = 0.0588, angle = 0.0789 degrees 
    12633  
    12634 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12635 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12636 Matrix rotation and translation 
    12637 0.99828667 0.02688990 0.05196878 -12.62077770 
    12638 -0.03783982 0.97411905 0.22284597 -28.98394877 
    12639 -0.04463146 -0.22443063 0.97346752 62.59016032 
    12640 Axis -0.96782764 0.20902587 -0.14006371 
    12641 Axis point 0.00000000 258.61760680 157.64978912 
    12642 Rotation angle (degrees) 13.36021844 
    12643 Shift along axis -2.61026745 
    12644  
    12645 
    12646 > fitmap #3 inMap #10
    12647 
    12648 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12649 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12650 correlation = 0.7932, correlation about mean = 0.5944, overlap = 3658 
    12651 steps = 28, shift = 0.0754, angle = 0.073 degrees 
    12652  
    12653 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12654 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12655 Matrix rotation and translation 
    12656 0.99822301 0.02677386 0.05323608 -12.75358994 
    12657 -0.03800948 0.97412339 0.22279811 -28.96396198 
    12658 -0.04589334 -0.22442565 0.97341000 62.83606113 
    12659 Axis -0.96668480 0.21427058 -0.14003074 
    12660 Axis point 0.00000000 259.64562487 157.58325438 
    12661 Rotation angle (degrees) 13.37469672 
    12662 Shift along axis -2.67640342 
    12663  
    12664 
    12665 > fitmap #3 inMap #10
    12666 
    12667 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12668 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12669 correlation = 0.7933, correlation about mean = 0.5952, overlap = 3659 
    12670 steps = 40, shift = 0.0789, angle = 0.0919 degrees 
    12671  
    12672 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12673 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12674 Matrix rotation and translation 
    12675 0.99830489 0.02685534 0.05163567 -12.55916741 
    12676 -0.03772855 0.97413646 0.22278875 -28.99982433 
    12677 -0.04431712 -0.22435922 0.97349835 62.51400939 
    12678 Axis -0.96813554 0.20775069 -0.13983282 
    12679 Axis point 0.00000000 258.37711663 157.73115504 
    12680 Rotation angle (degrees) 13.35197839 
    12681 Shift along axis -2.60726736 
    12682  
    12683 
    12684 > fitmap #3 inMap #10
    12685 
    12686 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12687 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12688 correlation = 0.7932, correlation about mean = 0.5944, overlap = 3658 
    12689 steps = 28, shift = 0.0955, angle = 0.141 degrees 
    12690  
    12691 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12692 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12693 Matrix rotation and translation 
    12694 0.99816869 0.02723761 0.05401379 -12.96076774 
    12695 -0.03865658 0.97400437 0.22320676 -28.90381563 
    12696 -0.04653005 -0.22488596 0.97327353 63.06858875 
    12697 Axis -0.96584674 0.21671841 -0.14203241 
    12698 Axis point 0.00000000 260.06220863 157.15644239 
    12699 Rotation angle (degrees) 13.41301299 
    12700 Shift along axis -2.70365749 
    12701  
    12702 
    12703 > select add #3
    12704 
    12705 2 models selected 
    12706 
    12707 > view matrix models
    12708 > #3,0.42977,-0.50886,-0.74589,452.6,-0.79107,-0.61046,-0.039326,423.66,-0.43533,0.60695,-0.6649,154.27
    12709 
    12710 > fitmap #3 inMap #10
    12711 
    12712 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12713 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12714 correlation = 0.7932, correlation about mean = 0.5943, overlap = 3658 
    12715 steps = 100, shift = 5.83, angle = 31.9 degrees 
    12716  
    12717 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12718 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12719 Matrix rotation and translation 
    12720 0.99828402 0.02689801 0.05201558 -12.58053911 
    12721 -0.03785874 0.97411591 0.22285647 -29.00313077 
    12722 -0.04467481 -0.22444328 0.97346262 62.60371733 
    12723 Axis -0.96778341 0.20920055 -0.14010853 
    12724 Axis point -0.00000000 258.62257438 157.68059117 
    12725 Rotation angle (degrees) 13.36154439 
    12726 Shift along axis -2.66354883 
    12727  
    12728 
    12729 > view matrix models
    12730 > #3,0.91342,-0.26712,-0.30711,229.32,-0.39689,-0.75183,-0.52652,473.2,-0.090251,0.60282,-0.79276,115.8
    12731 
    12732 > fitmap #3 inMap #10
    12733 
    12734 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12735 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12736 correlation = 0.7933, correlation about mean = 0.5947, overlap = 3658 
    12737 steps = 60, shift = 1.45, angle = 11.1 degrees 
    12738  
    12739 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12740 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12741 Matrix rotation and translation 
    12742 0.99829313 0.02677012 0.05190653 -12.55865704 
    12743 -0.03770307 0.97415362 0.22271799 -29.00513414 
    12744 -0.04460274 -0.22429486 0.97350013 62.55434816 
    12745 Axis -0.96790652 0.20896927 -0.13960230 
    12746 Axis point 0.00000000 258.61124820 157.76897369 
    12747 Rotation angle (degrees) 13.35108599 
    12748 Shift along axis -2.63830653 
    12749  
    12750 
    12751 > fitmap #3 inMap #10
    12752 
    12753 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12754 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12755 correlation = 0.7933, correlation about mean = 0.5947, overlap = 3658 
    12756 steps = 40, shift = 0.0248, angle = 0.0723 degrees 
    12757  
    12758 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12759 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12760 Matrix rotation and translation 
    12761 0.99822436 0.02690254 0.05314593 -12.77950248 
    12762 -0.03811842 0.97410137 0.22287576 -28.94772277 
    12763 -0.04577359 -0.22450583 0.97339715 62.83113242 
    12764 Axis -0.96673135 0.21375175 -0.14050154 
    12765 Axis point 0.00000000 259.53698329 157.48937596 
    12766 Rotation angle (degrees) 13.37884819 
    12767 Shift along axis -2.66115177 
    12768  
    12769 
    12770 > fitmap #3 inMap #10
    12771 
    12772 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12773 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12774 correlation = 0.7933, correlation about mean = 0.5951, overlap = 3659 
    12775 steps = 40, shift = 0.0519, angle = 0.0747 degrees 
    12776  
    12777 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12778 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12779 Matrix rotation and translation 
    12780 0.99829306 0.02689191 0.05184497 -12.59600948 
    12781 -0.03781366 0.97412136 0.22284031 -28.99253134 
    12782 -0.04451069 -0.22442036 0.97347542 62.56726776 
    12783 Axis -0.96793950 0.20852817 -0.14003261 
    12784 Axis point 0.00000000 258.52674727 157.68043880 
    12785 Rotation angle (degrees) 13.35816105 
    12786 Shift along axis -2.61504208 
    12787  
    12788 
    12789 > fitmap #3 inMap #10
    12790 
    12791 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12792 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12793 correlation = 0.7933, correlation about mean = 0.5951, overlap = 3659 
    12794 steps = 40, shift = 0.0122, angle = 0.0306 degrees 
    12795  
    12796 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12797 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12798 Matrix rotation and translation 
    12799 0.99826340 0.02710589 0.05230260 -12.70485172 
    12800 -0.03813243 0.97407418 0.22299218 -28.95597042 
    12801 -0.04490220 -0.22459934 0.97341616 62.68513659 
    12802 Axis -0.96745629 0.21010541 -0.14101076 
    12803 Axis point 0.00000000 258.80790379 157.46229209 
    12804 Rotation angle (degrees) 13.37502642 
    12805 Shift along axis -2.63169600 
    12806  
    12807 
    12808 > fitmap #3 inMap #10
    12809 
    12810 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12811 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12812 correlation = 0.7932, correlation about mean = 0.5944, overlap = 3658 
    12813 steps = 44, shift = 0.0443, angle = 0.0261 degrees 
    12814  
    12815 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12816 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12817 Matrix rotation and translation 
    12818 0.99824891 0.02691681 0.05267538 -12.69467955 
    12819 -0.03802385 0.97411780 0.22282013 -28.96357693 
    12820 -0.04531441 -0.22443285 0.97343546 62.72458042 
    12821 Axis -0.96715043 0.21189545 -0.14042924 
    12822 Axis point 0.00000000 259.16258366 157.55293580 
    12823 Rotation angle (degrees) 13.36902754 
    12824 Shift along axis -2.66795059 
    12825  
    12826 
    12827 > fitmap #3 inMap #10
    12828 
    12829 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12830 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12831 correlation = 0.7933, correlation about mean = 0.5952, overlap = 3659 
    12832 steps = 40, shift = 0.0495, angle = 0.0178 degrees 
    12833  
    12834 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12835 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12836 Matrix rotation and translation 
    12837 0.99826286 0.02695971 0.05238831 -12.69787697 
    12838 -0.03800608 0.97409400 0.22292717 -28.96657222 
    12839 -0.04502108 -0.22453097 0.97342644 62.69139938 
    12840 Axis -0.96742804 0.21060422 -0.14045946 
    12841 Axis point 0.00000000 258.92411117 157.54972372 
    12842 Rotation angle (degrees) 13.37136487 
    12843 Shift along axis -2.62180005 
    12844  
    12845 
    12846 > fitmap #3 inMap #10
    12847 
    12848 Fit map cryosparc_P12_J2741_004_volume_map_sharp.mrc in map
    12849 cryosparc_P12_J2769_004_volume_map.mrc using 5172 points 
    12850 correlation = 0.7932, correlation about mean = 0.5946, overlap = 3658 
    12851 steps = 40, shift = 0.0286, angle = 0.0239 degrees 
    12852  
    12853 Position of cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) relative to
    12854 cryosparc_P12_J2769_004_volume_map.mrc (#10) coordinates: 
    12855 Matrix rotation and translation 
    12856 0.99828478 0.02679976 0.05205168 -12.58279098 
    12857 -0.03776642 0.97414227 0.22275692 -29.00021233 
    12858 -0.04473591 -0.22434063 0.97348348 62.59091197 
    12859 Axis -0.96776890 0.20950241 -0.13975729 
    12860 Axis point 0.00000000 258.70777408 157.73022395 
    12861 Rotation angle (degrees) 13.35559658 
    12862 Shift along axis -2.64591682 
    12863  
    12864 
    12865 > select subtract #3
    12866 
    12867 Nothing selected 
    12868 
    12869 > hide #!3 models
    12870 
    12871 > volume #10 level 0.3642
    12872 
    12873 > show #!3 models
    12874 
    12875 > tile
    12876 
    12877 3 models tiled 
    12878 
    12879 > select add #10
    12880 
    12881 2 models selected 
    12882 
    12883 > view matrix models
    12884 > #10,0.17173,-0.53467,-0.82743,603.12,-0.76886,-0.59786,0.22675,454.19,-0.61592,0.59724,-0.51376,269.41
    12885 
    12886 > view matrix models
    12887 > #10,0.80994,-0.46574,-0.3565,375.55,-0.57785,-0.73774,-0.34904,557.53,-0.10044,0.4887,-0.86665,261.01
    12888 
    12889 > select subtract #10
    12890 
    12891 Nothing selected 
    12892 
    12893 > scalebar off
    12894 
    12895 > scalebar 50
    12896 
    12897 > save /Users/francescappadoo/Desktop/image28.png supersample 3
    12898 
    12899 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2788_007_volume_map.mrc
    12900 
    12901 Opened cryosparc_P12_J2788_007_volume_map.mrc as #23, grid size 128,128,128,
    12902 pixel 2.92, shown at level 0.04, step 1, values float32 
    12903 
    12904 > hide #!10 models
    12905 
    12906 > hide #!3 models
    12907 
    12908 > tile
    12909 
    12910 2 models tiled 
    12911 
    12912 > surface dust #23 size 29.2
    12913 
    12914 > volume #23 level 0.139
    12915 
    12916 > tile
    12917 
    12918 2 models tiled 
    12919 
    12920 > scalebar off
    12921 
    12922 > volume #23 level 0.2795
    12923 
    12924 > tile
    12925 
    12926 1 model tiled 
    12927 
    12928 > show #13 models
    12929 
    12930 > hide #!23 models
    12931 
    12932 > tile
    12933 
    12934 1 model tiled 
    12935 
    12936 > scalebar 50
    12937 
    12938 > save /Users/francescappadoo/Desktop/image29.png supersample 3
    12939 
    12940 > select #13:77-79
    12941 
    12942 97 atoms, 104 bonds, 3 residues, 1 model selected 
    12943 
    12944 > select add #13
    12945 
    12946 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    12947 
    12948 > select subtract #13
    12949 
    12950 Nothing selected 
    12951 
    12952 > hide #13 models
    12953 
    12954 > show #!23 models
    12955 
    12956 > select #13:77-79
    12957 
    12958 97 atoms, 104 bonds, 3 residues, 1 model selected 
    12959 
    12960 > tile
    12961 
    12962 2 models tiled 
    12963 
    12964 > volume #23 level 0.1677
    12965 
    12966 > show #!10 models
    12967 
    12968 > tile
    12969 
    12970 3 models tiled 
    12971 
    12972 > close #23
    12973 
    12974 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2789_005_volume_map.mrc
    12975 
    12976 Opened cryosparc_P12_J2789_005_volume_map.mrc as #9, grid size 128,128,128,
    12977 pixel 2.92, shown at level 0.0451, step 1, values float32 
    12978 
    12979 > tile
    12980 
    12981 3 models tiled 
    12982 
    12983 > surface dust #10 size 29.6
    12984 
    12985 > surface dust #9 size 29.2
    12986 
    12987 > volume #9 level 0.15
    12988 
    12989 > volume #9 level 0.1703
    12990 
    12991 > tile
    12992 
    12993 3 models tiled 
    12994 
    12995 > tile
    12996 
    12997 3 models tiled 
    12998 
    12999 > hide #!9 models
    13000 
    13001 > show #!9 models
    13002 
    13003 > hide #!10 models
    13004 
    13005 > show #!10 models
    13006 
    13007 > select add #10
    13008 
    13009 97 atoms, 104 bonds, 3 residues, 3 models selected 
    13010 
    13011 > select subtract #10
    13012 
    13013 97 atoms, 104 bonds, 3 residues, 1 model selected 
    13014 
    13015 > select add #10
    13016 
    13017 97 atoms, 104 bonds, 3 residues, 3 models selected 
    13018 
    13019 > view matrix models
    13020 > #13,0.47718,-0.060922,0.87669,205.79,-0.69659,0.58198,0.41959,730.41,-0.53578,-0.81092,0.23527,131.66,#10,-0.96265,0.045825,0.26685,494.46,0.23396,-0.35528,0.90501,83.362,0.13628,0.93363,0.33129,-104.15
    13021 
    13022 > select subtract #10
    13023 
    13024 97 atoms, 104 bonds, 3 residues, 1 model selected 
    13025 
    13026 > hide #!10 models
    13027 
    13028 > close #9
    13029 
    13030 > show #!8 models
    13031 
    13032 > tile
    13033 
    13034 2 models tiled 
    13035 
    13036 > close #8
    13037 
    13038 > show #!3 models
    13039 
    13040 > tile
    13041 
    13042 2 models tiled 
    13043 
    13044 > show #!10 models
    13045 
    13046 > tile
    13047 
    13048 3 models tiled 
    13049 
    13050 > tile
    13051 
    13052 3 models tiled 
    13053 
    13054 > select add #3
    13055 
    13056 97 atoms, 104 bonds, 3 residues, 3 models selected 
    13057 
    13058 > view matrix models
    13059 > #3,0.59496,-0.49578,-0.63263,397.02,-0.73219,-0.65899,-0.17214,448.19,-0.33155,0.56563,-0.75508,160.66,#13,0.32298,0.40572,0.85503,409.41,-0.93939,0.24722,0.23754,717.11,-0.115,-0.87993,0.46098,-47.96
    13060 
    13061 > view matrix models
    13062 > #3,-0.86029,0.068494,0.50518,335.36,0.41374,-0.48515,0.77036,16.128,0.29785,0.87174,0.38903,-240.41,#13,-0.74052,-0.17747,-0.64818,470.5,0.22283,0.84509,-0.48596,192.19,0.63402,-0.5043,-0.58626,-498.75
    13063 
    13064 > view matrix models
    13065 > #3,-0.68154,-0.020231,0.7315,275.04,0.64804,-0.48101,0.59048,6.8722,0.33991,0.87648,0.34094,-239.76,#13,-0.60135,0.044575,-0.79774,438.8,0.43162,0.85834,-0.2774,134.88,0.67237,-0.51113,-0.53541,-509.56
    13066 
    13067 > select subtract #3
    13068 
    13069 97 atoms, 104 bonds, 3 residues, 1 model selected 
    13070 
    13071 > tile
    13072 
    13073 3 models tiled 
    13074 
    13075 > tile
    13076 
    13077 3 models tiled 
    13078 
    13079 > scalebar off
    13080 
    13081 > scalebar 50
    13082 
    13083 > tile
    13084 
    13085 3 models tiled 
    13086 
    13087 > tile
    13088 
    13089 3 models tiled 
    13090 
    13091 > scalebar off
    13092 
    13093 > scalebar 50
    13094 
    13095 > scalebar off
    13096 
    13097 > scalebar 50
    13098 
    13099 > scalebar off
    13100 
    13101 > scalebar 50
    13102 
    13103 > show #13 models
    13104 
    13105 > hide #!10 models
    13106 
    13107 > tile
    13108 
    13109 3 models tiled 
    13110 
    13111 > view matrix models
    13112 > #13,0.8253,0.078268,-0.55924,434,0.18252,-0.97416,0.13303,243.58,-0.53437,-0.21186,-0.81827,194.07
    13113 
    13114 > view matrix models
    13115 > #13,0.54353,-0.39448,-0.74092,413.58,0.30588,-0.72891,0.61248,248.73,-0.78167,-0.55953,-0.27552,169.55
    13116 
    13117 > fitmap #13 inMap #3 search 200 resolution 15
    13118 
    13119 Found 74 unique fits from 200 random placements having fraction of points
    13120 inside contour >= 0.100 (200 of 200). 
    13121  
    13122 Correlations and times found: 
    13123 0.592 (7), 0.5692 (6), 0.5649 (16), 0.5649 (4), 0.5619 (5), 0.5535 (8), 0.55
    13124 (7), 0.5485 (2), 0.5468 (3), 0.5423 (5), 0.542 (4), 0.54 (5), 0.5398 (2),
    13125 0.5375 (5), 0.5345 (3), 0.5331 (3), 0.5311 (3), 0.5286 (4), 0.5285 (1), 0.5275
    13126 (6), 0.5256 (7), 0.5253 (1), 0.522 (3), 0.5196 (10), 0.5192 (1), 0.519 (2),
    13127 0.5158 (1), 0.5152 (4), 0.5062 (1), 0.5048 (4), 0.5042 (2), 0.5028 (3), 0.5024
    13128 (1), 0.5008 (2), 0.4986 (1), 0.4984 (1), 0.4958 (4), 0.4942 (4), 0.4933 (1),
    13129 0.4917 (1), 0.4909 (1), 0.4905 (1), 0.4883 (2), 0.4866 (1), 0.4863 (4), 0.4857
    13130 (1), 0.4848 (1), 0.4836 (3), 0.4784 (1), 0.4758 (1), 0.4756 (2), 0.4752 (1),
    13131 0.4746 (1), 0.4725 (2), 0.4694 (1), 0.4684 (1), 0.4674 (1), 0.4648 (1), 0.4641
    13132 (1), 0.4619 (1), 0.4583 (1), 0.4578 (1), 0.4577 (2), 0.4573 (2), 0.4511 (1),
    13133 0.4484 (2), 0.4438 (2), 0.4436 (1), 0.4429 (1), 0.4328 (1), 0.4306 (2), 0.4286
    13134 (1), 0.406 (1), 0.4003 (1) 
    13135  
    13136 Best fit found: 
    13137 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13138 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13139 correlation = 0.592, correlation about mean = 0.2329, overlap = 108.6 
    13140 steps = 204, shift = 32.7, angle = 47.8 degrees 
    13141 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13142 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13143 Matrix rotation and translation 
    13144 -0.47960592 -0.27444890 -0.83346009 174.25692059 
    13145 0.64470982 0.53411772 -0.54687044 237.54792387 
    13146 0.59525392 -0.79962233 -0.07922605 186.57269817 
    13147 Axis -0.14715884 -0.83183510 0.53515853 
    13148 Axis point -20.10358580 0.00000000 222.97786351 
    13149 Rotation angle (degrees) 120.82096775 
    13150 Shift along axis -123.39817585 
    13151  
    13152 Found 74 fits. 
    13153 
    13154 > ui tool show "Fit in Map"
    13155 
    13156 > fitmap #13 inMap #3 resolution 15 metric correlation
    13157 
    13158 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13159 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13160 correlation = 0.5941, correlation about mean = 0.2252, overlap = 108 
    13161 steps = 72, shift = 0.28, angle = 4.87 degrees 
    13162  
    13163 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13164 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13165 Matrix rotation and translation 
    13166 -0.54034387 -0.30350888 -0.78479974 170.92043165 
    13167 0.61337885 0.49639782 -0.61429258 236.33716207 
    13168 0.57601625 -0.81330891 -0.08205953 185.79488732 
    13169 Axis -0.12040363 -0.82328510 0.55471129 
    13170 Axis point -11.45272808 0.00000000 223.07032510 
    13171 Rotation angle (degrees) 124.26371937 
    13172 Shift along axis -112.08978055 
    13173  
    13174 Average map value = 0.2652 for 10778 atoms, 6713 outside contour 
    13175 
    13176 > fitmap #13 inMap #3 resolution 15 metric correlation
    13177 
    13178 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13179 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13180 correlation = 0.5726, correlation about mean = 0.1853, overlap = 103.2 
    13181 steps = 72, shift = 3.42, angle = 7.52 degrees 
    13182  
    13183 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13184 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13185 Matrix rotation and translation 
    13186 0.41464719 0.07024538 0.90726682 190.77901155 
    13187 0.70263683 0.60883691 -0.36826472 233.19587650 
    13188 -0.57824654 0.79017912 0.20309547 200.88908328 
    13189 Axis 0.58297517 0.74756961 0.31824461 
    13190 Axis point 71.66359982 0.00000000 60.52075920 
    13191 Rotation angle (degrees) 83.49500727 
    13192 Shift along axis 349.48144510 
    13193  
    13194 Average map value = 0.2523 for 10778 atoms, 7190 outside contour 
    13195 
    13196 > select up
    13197 
    13198 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    13199 
    13200 > select up
    13201 
    13202 40785 atoms, 43984 bonds, 1272 residues, 32 models selected 
    13203 
    13204 > select down
    13205 
    13206 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    13207 
    13208 > select down
    13209 
    13210 97 atoms, 104 bonds, 3 residues, 1 model selected 
    13211 
    13212 > select #13:63-68
    13213 
    13214 189 atoms, 203 bonds, 6 residues, 1 model selected 
    13215 
    13216 > fitmap #13 inMap #3 resolution 15 metric correlation
    13217 
    13218 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13219 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13220 correlation = 0.5726, correlation about mean = 0.1854, overlap = 103.2 
    13221 steps = 44, shift = 0.0608, angle = 0.0331 degrees 
    13222  
    13223 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13224 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13225 Matrix rotation and translation 
    13226 0.41429630 0.07067440 0.90739379 190.84242523 
    13227 0.70258930 0.60892225 -0.36821428 233.20728673 
    13228 -0.57855572 0.79007509 0.20261911 200.87202850 
    13229 Axis 0.58287267 0.74775731 0.31799128 
    13230 Axis point 71.73790452 0.00000000 60.48720535 
    13231 Rotation angle (degrees) 83.51639838 
    13232 Shift along axis 349.49484112 
    13233  
    13234 Average map value = 0.2523 for 10778 atoms, 7184 outside contour 
    13235 
    13236 > fitmap #13 inMap #3 resolution 15 metric correlation
    13237 
    13238 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13239 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13240 correlation = 0.5352, correlation about mean = 0.1685, overlap = 91.02 
    13241 steps = 52, shift = 0.467, angle = 2.55 degrees 
    13242  
    13243 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13244 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13245 Matrix rotation and translation 
    13246 0.86608194 0.24549135 -0.43547212 220.48674420 
    13247 0.45015040 -0.76183665 0.46579977 150.20599311 
    13248 -0.21740891 -0.59944879 -0.77032102 140.17927581 
    13249 Axis -0.96277831 -0.19708689 0.18497212 
    13250 Axis point 0.00000000 80.76739228 74.39829778 
    13251 Rotation angle (degrees) 146.41207967 
    13252 Shift along axis -215.95422869 
    13253  
    13254 Average map value = 0.2256 for 10778 atoms, 7440 outside contour 
    13255 
    13256 > fitmap #13 inMap #3 resolution 15 metric correlation
    13257 
    13258 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13259 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13260 correlation = 0.5352, correlation about mean = 0.1685, overlap = 91.03 
    13261 steps = 40, shift = 0.0166, angle = 0.0145 degrees 
    13262  
    13263 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13264 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13265 Matrix rotation and translation 
    13266 0.86606488 0.24556344 -0.43546540 220.48687253 
    13267 0.45014927 -0.76196713 0.46558738 150.19273047 
    13268 -0.21747919 -0.59925339 -0.77045321 140.19810311 
    13269 Axis -0.96277637 -0.19709235 0.18497639 
    13270 Axis point 0.00000000 80.75014489 74.41800438 
    13271 Rotation angle (degrees) 146.42656783 
    13272 Shift along axis -215.94805048 
    13273  
    13274 Average map value = 0.2256 for 10778 atoms, 7443 outside contour 
    13275 
    13276 > fitmap #13 inMap #3 resolution 15 metric correlation
    13277 
    13278 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13279 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13280 correlation = 0.5211, correlation about mean = 0.1509, overlap = 94.72 
    13281 steps = 64, shift = 1.96, angle = 2.3 degrees 
    13282  
    13283 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13284 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13285 Matrix rotation and translation 
    13286 0.63176598 -0.36149646 0.68570542 179.19402635 
    13287 0.32674144 -0.67798478 -0.65846529 179.13110055 
    13288 0.70293072 0.64004446 -0.31021195 230.64494508 
    13289 Axis 0.88350441 -0.01172007 0.46827620 
    13290 Axis point 0.00000000 64.25947318 112.99215311 
    13291 Rotation angle (degrees) 132.70434242 
    13292 Shift along axis 264.22482127 
    13293  
    13294 Average map value = 0.2316 for 10778 atoms, 7382 outside contour 
    13295 
    13296 > fitmap #13 inMap #3 resolution 15 metric correlation
    13297 
    13298 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13299 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13300 correlation = 0.521, correlation about mean = 0.1509, overlap = 94.72 
    13301 steps = 60, shift = 0.0534, angle = 0.0355 degrees 
    13302  
    13303 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13304 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13305 Matrix rotation and translation 
    13306 0.63175860 -0.36180387 0.68555007 179.23792860 
    13307 0.32618389 -0.67820339 -0.65851658 179.10871333 
    13308 0.70319625 0.63963902 -0.31044634 230.64423708 
    13309 Axis 0.88351895 -0.01200991 0.46824142 
    13310 Axis point 0.00000000 64.28542178 112.97784931 
    13311 Rotation angle (degrees) 132.72229287 
    13312 Shift along axis 264.20621182 
    13313  
    13314 Average map value = 0.2315 for 10778 atoms, 7378 outside contour 
    13315 
    13316 > fitmap #13 inMap #3 resolution 15 metric correlation
    13317 
    13318 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13319 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13320 correlation = 0.5195, correlation about mean = 0.09215, overlap = 92.84 
    13321 steps = 64, shift = 4.82, angle = 4.71 degrees 
    13322  
    13323 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13324 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13325 Matrix rotation and translation 
    13326 -0.66626530 0.40411496 -0.62672286 194.48178422 
    13327 0.74365893 0.42242677 -0.51819581 224.46131093 
    13328 0.05533391 -0.81132406 -0.58197200 157.12309929 
    13329 Axis -0.35907491 -0.83550280 0.41593303 
    13330 Axis point 18.74513903 0.00000000 150.46241151 
    13331 Rotation angle (degrees) 155.90997987 
    13332 Shift along axis -192.01889527 
    13333  
    13334 Average map value = 0.2252 for 10778 atoms, 7589 outside contour 
    13335 
    13336 > fitmap #13 inMap #3 resolution 15 metric correlation
    13337 
    13338 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13339 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13340 correlation = 0.5195, correlation about mean = 0.09217, overlap = 92.84 
    13341 steps = 60, shift = 0.00911, angle = 0.0107 degrees 
    13342  
    13343 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13344 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13345 Matrix rotation and translation 
    13346 -0.66625470 0.40408971 -0.62675040 194.48726392 
    13347 0.74365648 0.42257015 -0.51808242 224.46292130 
    13348 0.05549432 -0.81126197 -0.58204328 157.12372722 
    13349 Axis -0.35905641 -0.83554375 0.41586674 
    13350 Axis point 18.74688870 0.00000000 150.45495495 
    13351 Rotation angle (degrees) 155.90417635 
    13352 Shift along axis -192.03795705 
    13353  
    13354 Average map value = 0.2252 for 10778 atoms, 7589 outside contour 
    13355 
    13356 > fitmap #13 inMap #3 resolution 15 metric correlation
    13357 
    13358 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13359 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13360 correlation = 0.5195, correlation about mean = 0.09205, overlap = 92.83 
    13361 steps = 60, shift = 7.22, angle = 0.0446 degrees 
    13362  
    13363 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13364 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13365 Matrix rotation and translation 
    13366 -0.66637610 0.40423116 -0.62653008 194.49966638 
    13367 0.74359989 0.42204213 -0.51859379 224.45710657 
    13368 0.05479040 -0.81146633 -0.58182505 157.12986486 
    13369 Axis -0.35910473 -0.83539893 0.41611588 
    13370 Axis point 18.76999302 0.00000000 150.48514217 
    13371 Rotation angle (degrees) 155.93445039 
    13372 Shift along axis -191.97274499 
    13373  
    13374 Average map value = 0.2252 for 10778 atoms, 7589 outside contour 
    13375 
    13376 > fitmap #13 inMap #3 resolution 15 metric correlation
    13377 
    13378 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13379 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13380 correlation = 0.5168, correlation about mean = 0.1346, overlap = 85.1 
    13381 steps = 112, shift = 23.2, angle = 22.9 degrees 
    13382  
    13383 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13384 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13385 Matrix rotation and translation 
    13386 -0.56237319 0.55385770 -0.61398531 213.39878905 
    13387 0.78246990 0.59653088 -0.17858228 241.60561208 
    13388 0.26735210 -0.58085503 -0.76884996 194.15469014 
    13389 Axis -0.40412740 -0.88540074 0.22966621 
    13390 Axis point 13.50332438 0.00000000 144.98685533 
    13391 Rotation angle (degrees) 150.15169523 
    13392 Shift along axis -255.56731551 
    13393  
    13394 Average map value = 0.2086 for 10778 atoms, 7585 outside contour 
    13395 
    13396 > fitmap #13 inMap #3 resolution 15 metric correlation
    13397 
    13398 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13399 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13400 correlation = 0.5169, correlation about mean = 0.1345, overlap = 85.12 
    13401 steps = 28, shift = 0.0439, angle = 0.0186 degrees 
    13402  
    13403 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13404 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13405 Matrix rotation and translation 
    13406 -0.56232470 0.55409952 -0.61381151 213.36487881 
    13407 0.78252248 0.59651760 -0.17839617 241.59215024 
    13408 0.26730021 -0.58063800 -0.76903191 194.15738848 
    13409 Axis -0.40420019 -0.88540152 0.22953507 
    13410 Axis point 13.49498689 0.00000000 144.95480518 
    13411 Rotation angle (degrees) 150.16014285 
    13412 Shift along axis -255.58225348 
    13413  
    13414 Average map value = 0.2086 for 10778 atoms, 7584 outside contour 
    13415 
    13416 > fitmap #13 inMap #3 resolution 15 metric correlation
    13417 
    13418 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13419 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13420 correlation = 0.5195, correlation about mean = 0.09241, overlap = 92.85 
    13421 steps = 112, shift = 29.3, angle = 22.8 degrees 
    13422  
    13423 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13424 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13425 Matrix rotation and translation 
    13426 -0.66691220 0.40406223 -0.62606846 194.53006399 
    13427 0.74300944 0.42404778 -0.51780338 224.48438853 
    13428 0.05625823 -0.81050429 -0.58302469 157.13313330 
    13429 Axis -0.35862865 -0.83601347 0.41529143 
    13430 Axis point 18.88522122 0.00000000 150.34905200 
    13431 Rotation angle (degrees) 155.91549605 
    13432 Shift along axis -192.17998367 
    13433  
    13434 Average map value = 0.2252 for 10778 atoms, 7583 outside contour 
    13435 
    13436 > fitmap #13 inMap #3 resolution 15 metric correlation
    13437 
    13438 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13439 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13440 correlation = 0.5195, correlation about mean = 0.09247, overlap = 92.86 
    13441 steps = 48, shift = 0.0801, angle = 0.0502 degrees 
    13442  
    13443 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13444 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13445 Matrix rotation and translation 
    13446 -0.66631651 0.40421993 -0.62660070 194.48732078 
    13447 0.74351443 0.42399351 -0.51712249 224.48561635 
    13448 0.05664349 -0.81045404 -0.58305724 157.10780676 
    13449 Axis -0.35890115 -0.83597254 0.41513838 
    13450 Axis point 18.78059752 0.00000000 150.32903723 
    13451 Rotation angle (degrees) 155.87979745 
    13452 Shift along axis -192.24405358 
    13453  
    13454 Average map value = 0.2253 for 10778 atoms, 7589 outside contour 
    13455 
    13456 > fitmap #13 inMap #3 resolution 15 metric correlation
    13457 
    13458 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13459 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13460 correlation = 0.5195, correlation about mean = 0.09221, overlap = 92.83 
    13461 steps = 48, shift = 0.116, angle = 0.0977 degrees 
    13462  
    13463 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13464 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13465 Matrix rotation and translation 
    13466 -0.66670092 0.40407252 -0.62628681 194.52898247 
    13467 0.74326508 0.42288208 -0.51838947 224.45449074 
    13468 0.05537862 -0.81110798 -0.58226888 157.14014340 
    13469 Axis -0.35884562 -0.83565831 0.41581848 
    13470 Axis point 18.84075179 0.00000000 150.43820254 
    13471 Rotation angle (degrees) 155.92944170 
    13472 Shift along axis -192.03135785 
    13473  
    13474 Average map value = 0.2252 for 10778 atoms, 7589 outside contour 
    13475 
    13476 > ui tool show ViewDockX
    13477 
    13478 No suitable models found for ViewDockX 
    13479 
    13480 > open 6dbp fromDatabase pdb format mmcif
    13481 
    13482 Summary of feedback from opening 6dbp fetched from pdb 
    13483 --- 
    13484 note | Fetching compressed mmCIF 6dbp from http://files.rcsb.org/download/6dbp.cif 
    13485  
    13486 6dbp title: 
    13487 RNA-recognition motif 1 of human MSI2 [more info...] 
    13488  
    13489 Chain information for 6dbp #9 
    13490 --- 
    13491 Chain | Description | UniProt 
    13492 A B | RNA-binding protein Musashi homolog 2 | MSI2H_HUMAN 2-84 
    13493  
    13494 
    13495 > hide #9 models
    13496 
    13497 > show #9 models
    13498 
    13499 > hide #9 models
    13500 
    13501 > show #9 models
    13502 
    13503 > hide #9 models
    13504 
    13505 > show #9 models
    13506 
    13507 > tile
    13508 
    13509 4 models tiled 
    13510 
    13511 > fitmap #13 inMap #3 resolution 15 metric correlation
    13512 
    13513 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13514 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13515 correlation = 0.1129, correlation about mean = 0.1109, overlap = 0.0491 
    13516 steps = 2000, shift = 20.4, angle = 15.3 degrees 
    13517  
    13518 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13519 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13520 Matrix rotation and translation 
    13521 -0.67024222 0.51161026 -0.53761531 101.17265145 
    13522 0.71357088 0.24518835 -0.65627675 221.13328006 
    13523 -0.20394083 -0.82349112 -0.52940576 379.06371678 
    13524 Axis -0.39403240 -0.78628743 0.47591022 
    13525 Axis point -31.77225864 0.00000000 262.46131483 
    13526 Rotation angle (degrees) 167.74965653 
    13527 Shift along axis -33.33932414 
    13528  
    13529 Average map value = 0.001199 for 1452 atoms, 10778 outside contour 
    13530 
    13531 > select add #9
    13532 
    13533 1657 atoms, 1566 bonds, 312 residues, 2 models selected 
    13534 
    13535 > view matrix models
    13536 > #13,0.18396,-0.91697,0.354,390.71,-0.74452,-0.36513,-0.5589,242.61,0.64175,-0.16075,-0.74988,246.32,#9,0.91895,-0.24329,-0.31039,337.94,0.33791,0.89153,0.30163,120.19,0.20334,-0.38207,0.90149,360.76
    13537 
    13538 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    13539 got 2 atomic models, 1 maps. 
    13540 
    13541 [Repeated 1 time(s)]
    13542 
    13543 > select add #13
    13544 
    13545 12246 atoms, 12987 bonds, 642 residues, 2 models selected 
    13546 
    13547 > select subtract #13
    13548 
    13549 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13550 
    13551 > view matrix models
    13552 > #9,0.38918,-0.78366,-0.48417,345.12,0.69265,0.59545,-0.40703,128.43,0.60727,-0.17695,0.77454,359.39
    13553 
    13554 > fitmap #9 inMap #3
    13555 
    13556 Fit molecule 6dbp (#9) to map cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13557 (#3) using 1468 atoms 
    13558 average map value = 0, steps = 24 
    13559 shifted from previous position = 0 
    13560 rotated from previous position = 0 degrees 
    13561 atoms outside contour = 1468, contour level = 0.2754 
    13562  
    13563 Position of 6dbp (#9) relative to cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13564 (#3) coordinates: 
    13565 Matrix rotation and translation 
    13566 0.13079600 0.97109624 0.19966101 145.94459268 
    13567 0.39041028 -0.23556977 0.88999255 483.04799544 
    13568 0.91130250 -0.03845776 -0.40993754 285.58775589 
    13569 Axis -0.71090855 -0.54489940 -0.44462757 
    13570 Axis point 0.00000000 202.83167498 41.25380225 
    13571 Rotation angle (degrees) 139.23162849 
    13572 Shift along axis -493.94601259 
    13573  
    13574 
    13575 > hide #13 models
    13576 
    13577 > ui mousemode right "translate selected models"
    13578 
    13579 > tile
    13580 
    13581 3 models tiled 
    13582 
    13583 > view matrix models
    13584 > #9,0.42574,-0.78847,-0.4439,293.75,0.66819,0.60476,-0.43334,127.34,0.61013,-0.11212,0.78432,89.549
    13585 
    13586 > view matrix models
    13587 > #9,0.42574,-0.78847,-0.4439,293.7,0.66819,0.60476,-0.43334,127.31,0.61013,-0.11212,0.78432,89.422
    13588 
    13589 > view matrix models
    13590 > #9,0.42574,-0.78847,-0.4439,286.74,0.66819,0.60476,-0.43334,122.58,0.61013,-0.11212,0.78432,74.513
    13591 
    13592 > fitmap #9 inMap #3
    13593 
    13594 Fit molecule 6dbp (#9) to map cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13595 (#3) using 1468 atoms 
    13596 average map value = 0.7617, steps = 128 
    13597 shifted from previous position = 41.6 
    13598 rotated from previous position = 74.2 degrees 
    13599 atoms outside contour = 164, contour level = 0.2754 
    13600  
    13601 Position of 6dbp (#9) relative to cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13602 (#3) coordinates: 
    13603 Matrix rotation and translation 
    13604 0.64380154 0.68130484 -0.34834365 185.84288696 
    13605 -0.24615308 0.61543737 0.74876268 171.65371919 
    13606 0.72451933 -0.39630871 0.56392480 160.15078034 
    13607 Axis -0.62821238 -0.58859720 -0.50882466 
    13608 Axis point 0.00000000 8.47122977 10.35692440 
    13609 Rotation angle (degrees) 65.69575701 
    13610 Shift along axis -299.27236819 
    13611  
    13612 
    13613 > fitmap #9 inMap #3
    13614 
    13615 Fit molecule 6dbp (#9) to map cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13616 (#3) using 1468 atoms 
    13617 average map value = 0.7617, steps = 60 
    13618 shifted from previous position = 0.0101 
    13619 rotated from previous position = 0.0402 degrees 
    13620 atoms outside contour = 164, contour level = 0.2754 
    13621  
    13622 Position of 6dbp (#9) relative to cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13623 (#3) coordinates: 
    13624 Matrix rotation and translation 
    13625 0.64359468 0.68173292 -0.34788811 185.83586302 
    13626 -0.24639929 0.61489454 0.74912758 171.64544050 
    13627 0.72461942 -0.39641515 0.56372135 160.15432738 
    13628 Axis -0.62832270 -0.58826337 -0.50907445 
    13629 Axis point 0.00000000 8.44273018 10.21769458 
    13630 Rotation angle (degrees) 65.72571445 
    13631 Shift along axis -299.26809210 
    13632  
    13633 
    13634 > fitmap #9 inMap #3
    13635 
    13636 Fit molecule 6dbp (#9) to map cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13637 (#3) using 1468 atoms 
    13638 average map value = 0.7617, steps = 60 
    13639 shifted from previous position = 0.00105 
    13640 rotated from previous position = 0.00433 degrees 
    13641 atoms outside contour = 164, contour level = 0.2754 
    13642  
    13643 Position of 6dbp (#9) relative to cryosparc_P12_J2741_004_volume_map_sharp.mrc
    13644 (#3) coordinates: 
    13645 Matrix rotation and translation 
    13646 0.64357555 0.68177709 -0.34783694 185.83496325 
    13647 -0.24642439 0.61483568 0.74916764 171.64459708 
    13648 0.72462788 -0.39643047 0.56369970 160.15474850 
    13649 Axis -0.62833759 -0.58822544 -0.50909989 
    13650 Axis point 0.00000000 8.44105729 10.20252383 
    13651 Rotation angle (degrees) 65.72884564 
    13652 Shift along axis -299.26757746 
    13653  
    13654 
    13655 > fitmap #9 inMap #3 search 50 resolution 15
    13656 
    13657 Opened 6dbp map 15 as #21, grid size 27,28,28, pixel 5, shown at level 0.0336,
    13658 step 1, values float32 
    13659 Found 12 unique fits from 50 random placements having fraction of points
    13660 inside contour >= 0.100 (50 of 50). 
    13661  
    13662 Correlations and times found: 
    13663 0.9337 (4), 0.9331 (2), 0.9225 (7), 0.9184 (4), 0.9141 (2), 0.9126 (1), 0.8949
    13664 (3), 0.8928 (7), 0.8909 (2), 0.8907 (4), 0.8897 (7), 0.8894 (7) 
    13665  
    13666 Best fit found: 
    13667 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13668 429 points 
    13669 correlation = 0.9337, correlation about mean = 0.7355, overlap = 41.29 
    13670 steps = 152, shift = 35.1, angle = 55.3 degrees 
    13671 Position of 6dbp map 15 (#21) relative to
    13672 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13673 Matrix rotation and translation 
    13674 0.36801039 -0.27987883 0.88669959 181.84914115 
    13675 0.18234355 0.95682960 0.22633602 175.92587655 
    13676 -0.91176709 0.07838995 0.40315729 220.46186980 
    13677 Axis -0.07942138 0.96546472 0.24813326 
    13678 Axis point 225.82310726 0.00000000 -62.95099516 
    13679 Rotation angle (degrees) 68.65402978 
    13680 Shift along axis 210.11144016 
    13681  
    13682 Found 12 fits. 
    13683 
    13684 > fitmap #9 inMap #3 resolution 15 metric correlation
    13685 
    13686 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13687 429 points 
    13688 correlation = 0.9373, correlation about mean = 0.7523, overlap = 41.15 
    13689 steps = 88, shift = 1.76, angle = 11.3 degrees 
    13690  
    13691 Position of 6dbp map 15 (#21) relative to
    13692 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13693 Matrix rotation and translation 
    13694 0.51203876 -0.15342060 0.84514994 181.16112656 
    13695 0.11335600 0.98738355 0.11056303 176.79516588 
    13696 -0.85144980 0.03919026 0.52296975 221.43569421 
    13697 Axis -0.04152167 0.98701018 0.15519937 
    13698 Axis point 263.70304588 0.00000000 -71.99239030 
    13699 Rotation angle (degrees) 59.25647047 
    13700 Shift along axis 201.34319798 
    13701  
    13702 Average map value = 0.5722 for 1468 atoms, 114 outside contour 
    13703 
    13704 > fitmap #9 inMap #3 resolution 15 metric correlation
    13705 
    13706 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13707 429 points 
    13708 correlation = 0.9373, correlation about mean = 0.7524, overlap = 41.14 
    13709 steps = 28, shift = 0.0528, angle = 0.15 degrees 
    13710  
    13711 Position of 6dbp map 15 (#21) relative to
    13712 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13713 Matrix rotation and translation 
    13714 0.51147653 -0.15099988 0.84592600 181.08967416 
    13715 0.11187432 0.98776209 0.10867487 176.79367643 
    13716 -0.85198353 0.03905276 0.52211009 221.46222490 
    13717 Axis -0.04048860 0.98741593 0.15287398 
    13718 Axis point 263.85841980 0.00000000 -71.31900326 
    13719 Rotation angle (degrees) 59.29124168 
    13720 Shift along axis 201.09263541 
    13721  
    13722 Average map value = 0.5721 for 1468 atoms, 114 outside contour 
    13723 
    13724 > fitmap #9 inMap #3 resolution 15 metric correlation
    13725 
    13726 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13727 429 points 
    13728 correlation = 0.9373, correlation about mean = 0.7523, overlap = 41.15 
    13729 steps = 80, shift = 1.77, angle = 11.3 degrees 
    13730  
    13731 Position of 6dbp map 15 (#21) relative to
    13732 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13733 Matrix rotation and translation 
    13734 0.51107357 -0.15171729 0.84604119 181.09661505 
    13735 0.11221643 0.98765159 0.10932446 176.80488794 
    13736 -0.85218033 0.03906689 0.52178775 221.45461183 
    13737 Axis -0.04084637 0.98731249 0.15344586 
    13738 Axis point 263.70012478 0.00000000 -71.37090494 
    13739 Rotation angle (degrees) 59.31908689 
    13740 Shift along axis 201.14582728 
    13741  
    13742 Average map value = 0.5722 for 1468 atoms, 114 outside contour 
    13743 
    13744 > show #!21 models
    13745 
    13746 > hide #!21 models
    13747 
    13748 > show #!21 models
    13749 
    13750 > hide #!21 models
    13751 
    13752 > select down
    13753 
    13754 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13755 
    13756 > select down
    13757 
    13758 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13759 
    13760 > select down
    13761 
    13762 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13763 
    13764 > select down
    13765 
    13766 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13767 
    13768 > select down
    13769 
    13770 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13771 
    13772 > select down
    13773 
    13774 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13775 
    13776 > select down
    13777 
    13778 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13779 
    13780 > select down
    13781 
    13782 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13783 
    13784 > fitmap #9 inMap #3 search 200 resolution 15
    13785 
    13786 Found 12 unique fits from 200 random placements having fraction of points
    13787 inside contour >= 0.100 (200 of 200). 
    13788  
    13789 Correlations and times found: 
    13790 0.9337 (16), 0.9331 (24), 0.9227 (21), 0.9182 (18), 0.9141 (6), 0.9127 (8),
    13791 0.8949 (17), 0.8929 (11), 0.8908 (8), 0.8906 (27), 0.8898 (25), 0.8891 (19) 
    13792  
    13793 Best fit found: 
    13794 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13795 429 points 
    13796 correlation = 0.9337, correlation about mean = 0.7355, overlap = 41.29 
    13797 steps = 196, shift = 17.5, angle = 131 degrees 
    13798 Position of 6dbp map 15 (#21) relative to
    13799 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13800 Matrix rotation and translation 
    13801 0.36832144 -0.27961072 0.88665510 181.84804383 
    13802 0.18223994 0.95691378 0.22606364 175.92874039 
    13803 -0.91166222 0.07831986 0.40340809 220.46002799 
    13804 Axis -0.07932354 0.96551540 0.24796732 
    13805 Axis point 225.88068834 0.00000000 -62.96727407 
    13806 Rotation angle (degrees) 68.63415923 
    13807 Shift along axis 210.10395988 
    13808  
    13809 Found 12 fits. 
    13810 
    13811 > select down
    13812 
    13813 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13814 
    13815 > select down
    13816 
    13817 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13818 
    13819 > select down
    13820 
    13821 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13822 
    13823 > select down
    13824 
    13825 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13826 
    13827 > fitmap #9 inMap #3 search 200 resolution 15
    13828 
    13829 Found 12 unique fits from 200 random placements having fraction of points
    13830 inside contour >= 0.100 (200 of 200). 
    13831  
    13832 Correlations and times found: 
    13833 0.9337 (16), 0.9331 (24), 0.9227 (21), 0.9182 (17), 0.9141 (7), 0.9127 (8),
    13834 0.8949 (17), 0.8929 (11), 0.891 (8), 0.8907 (27), 0.8897 (25), 0.8891 (19) 
    13835  
    13836 Best fit found: 
    13837 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13838 429 points 
    13839 correlation = 0.9337, correlation about mean = 0.7355, overlap = 41.29 
    13840 steps = 196, shift = 17.5, angle = 131 degrees 
    13841 Position of 6dbp map 15 (#21) relative to
    13842 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13843 Matrix rotation and translation 
    13844 0.36899961 -0.27864125 0.88667834 181.81540778 
    13845 0.18111945 0.95727107 0.22545069 175.94028776 
    13846 -0.91161134 0.07740348 0.40369997 220.46273490 
    13847 Axis -0.07950863 0.96577005 0.24691412 
    13848 Axis point 226.15264457 0.00000000 -62.93337024 
    13849 Rotation angle (degrees) 68.59332252 
    13850 Shift along axis 209.89732862 
    13851  
    13852 Found 12 fits. 
    13853 
    13854 > select down
    13855 
    13856 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13857 
    13858 > select down
    13859 
    13860 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13861 
    13862 > select down
    13863 
    13864 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    13865 
    13866 > show #13 models
    13867 
    13868 > fitmap #13 #9 inMap #3 search 200 resolution 15
    13869 
    13870 Opened map 15 as #22, grid size 44,50,42, pixel 5, shown at level 0.0347, step
    13871 1, values float32 
    13872 Found 85 unique fits from 200 random placements having fraction of points
    13873 inside contour >= 0.100 (200 of 200). 
    13874  
    13875 Correlations and times found: 
    13876 0.5472 (15), 0.5452 (16), 0.5275 (6), 0.5205 (1), 0.5184 (1), 0.5157 (4),
    13877 0.515 (4), 0.5144 (3), 0.5097 (2), 0.5094 (3), 0.5082 (2), 0.5072 (5), 0.507
    13878 (2), 0.507 (1), 0.5065 (2), 0.5055 (2), 0.5046 (12), 0.5041 (5), 0.5038 (6),
    13879 0.5031 (5), 0.5023 (2), 0.501 (4), 0.5 (1), 0.4991 (7), 0.4954 (1), 0.4942
    13880 (3), 0.4883 (2), 0.4865 (1), 0.485 (1), 0.4847 (1), 0.4844 (1), 0.4837 (1),
    13881 0.4824 (1), 0.4822 (1), 0.4801 (1), 0.4797 (2), 0.4797 (1), 0.478 (1), 0.4779
    13882 (1), 0.4769 (8), 0.4769 (5), 0.4755 (1), 0.4721 (1), 0.4704 (1), 0.4703 (1),
    13883 0.468 (1), 0.4672 (2), 0.4525 (2), 0.4521 (2), 0.4493 (1), 0.4488 (1), 0.4488
    13884 (1), 0.4484 (1), 0.448 (1), 0.4449 (1), 0.4441 (3), 0.4437 (1), 0.4435 (1),
    13885 0.4408 (1), 0.4406 (1), 0.4403 (1), 0.4363 (1), 0.436 (2), 0.4316 (3), 0.431
    13886 (2), 0.4305 (1), 0.4295 (2), 0.4292 (1), 0.4245 (1), 0.4236 (1), 0.4212 (1),
    13887 0.4187 (1), 0.4167 (2), 0.4144 (1), 0.4122 (1), 0.4111 (1), 0.4044 (1), 0.4014
    13888 (1), 0.4011 (1), 0.3885 (1), 0.3839 (1), 0.3738 (2), 0.3687 (1), 0.3599 (2),
    13889 0.3419 (1) 
    13890  
    13891 Best fit found: 
    13892 Fit map map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2970
    13893 points 
    13894 correlation = 0.5472, correlation about mean = 0.1921, overlap = 109.4 
    13895 steps = 344, shift = 43.9, angle = 90.3 degrees 
    13896 Position of map 15 (#22) relative to
    13897 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13898 Matrix rotation and translation 
    13899 -0.51757609 -0.28183139 -0.80788974 171.87147517 
    13900 0.60661002 0.54503293 -0.57875997 236.97956803 
    13901 0.60343935 -0.78962642 -0.11113424 187.76201676 
    13902 Axis -0.12544370 -0.83959468 0.52853065 
    13903 Axis point -13.53163529 0.00000000 219.32671802 
    13904 Rotation angle (degrees) 122.80889827 
    13905 Shift along axis -121.28899770 
    13906  
    13907 Found 85 fits. 
    13908 
    13909 > select #13:63-68
    13910 
    13911 189 atoms, 203 bonds, 6 residues, 1 model selected 
    13912 
    13913 > fitmap #9 inMap #3 resolution 15 metric correlation
    13914 
    13915 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13916 429 points 
    13917 correlation = -0.119, correlation about mean = 0.3136, overlap = -0.4336 
    13918 steps = 92, shift = 23.8, angle = 29.3 degrees 
    13919  
    13920 Position of 6dbp map 15 (#21) relative to
    13921 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13922 Matrix rotation and translation 
    13923 -0.78502341 0.17604170 0.59392569 256.94822942 
    13924 0.12975391 -0.89077313 0.43553104 156.17108955 
    13925 0.60572461 0.41896618 0.67643553 200.88744645 
    13926 Axis -0.32763715 -0.23337130 -0.91552812 
    13927 Axis point 93.11615534 51.39700887 0.00000000 
    13928 Rotation angle (degrees) 178.55144959 
    13929 Shift along axis -304.54974235 
    13930  
    13931 Average map value = -0.001517 for 1468 atoms, 1468 outside contour 
    13932 
    13933 > fitmap #9 inMap #3 resolution 15 metric correlation
    13934 
    13935 Fit map 6dbp map 15 in map cryosparc_P12_J2741_004_volume_map_sharp.mrc using
    13936 429 points 
    13937 correlation = -0.119, correlation about mean = 0.3132, overlap = -0.4336 
    13938 steps = 24, shift = 0.0469, angle = 0.0534 degrees 
    13939  
    13940 Position of 6dbp map 15 (#21) relative to
    13941 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13942 Matrix rotation and translation 
    13943 -0.78456117 0.17671968 0.59433499 256.98420008 
    13944 0.12936611 -0.89077825 0.43563593 156.15965104 
    13945 0.60640606 0.41866977 0.67600836 200.89172355 
    13946 Axis -0.32797953 -0.23335066 -0.91541078 
    13947 Axis point 93.10472756 51.36510503 0.00000000 
    13948 Rotation angle (degrees) 178.51789928 
    13949 Shift along axis -304.62396382 
    13950  
    13951 Average map value = -0.001519 for 1468 atoms, 1468 outside contour 
    13952 
    13953 > select down
    13954 
    13955 189 atoms, 203 bonds, 6 residues, 1 model selected 
    13956 
    13957 > select down
    13958 
    13959 189 atoms, 203 bonds, 6 residues, 1 model selected 
    13960 
    13961 > fitmap #13 inMap #3 resolution 15 metric correlation
    13962 
    13963 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13964 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13965 correlation = 0.545, correlation about mean = 0.1442, overlap = 95.77 
    13966 steps = 192, shift = 55, angle = 59.8 degrees 
    13967  
    13968 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13969 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13970 Matrix rotation and translation 
    13971 -0.81219708 0.22750499 -0.53719377 181.24170091 
    13972 0.57965563 0.21078863 -0.78712596 215.60956370 
    13973 -0.06584075 -0.95068895 -0.30307652 141.64502301 
    13974 Axis -0.26783512 -0.77184269 0.57664826 
    13975 Axis point 31.07330223 0.00000000 166.11067555 
    13976 Rotation angle (degrees) 162.22121786 
    13977 Shift along axis -133.28020007 
    13978  
    13979 Average map value = 0.235 for 10778 atoms, 7382 outside contour 
    13980 
    13981 > fitmap #13 inMap #3 resolution 15 metric correlation
    13982 
    13983 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    13984 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    13985 correlation = 0.5941, correlation about mean = 0.2252, overlap = 108 
    13986 steps = 164, shift = 25.3, angle = 41.6 degrees 
    13987  
    13988 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    13989 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    13990 Matrix rotation and translation 
    13991 -0.54061853 -0.30353447 -0.78460069 170.90251462 
    13992 0.61305907 0.49652565 -0.61450844 236.32593319 
    13993 0.57609889 -0.81322134 -0.08234644 185.80543853 
    13994 Axis -0.12024155 -0.82336188 0.55463248 
    13995 Axis point -11.40167211 0.00000000 223.03286812 
    13996 Rotation angle (degrees) 124.27875513 
    13997 Shift along axis -112.07761644 
    13998  
    13999 Average map value = 0.2652 for 10778 atoms, 6713 outside contour 
    14000 
    14001 > fitmap #13 inMap #3 resolution 15 metric correlation
    14002 
    14003 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14004 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14005 correlation = 0.5941, correlation about mean = 0.2251, overlap = 108 
    14006 steps = 48, shift = 0.202, angle = 0.0542 degrees 
    14007  
    14008 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14009 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14010 Matrix rotation and translation 
    14011 -0.54125410 -0.30360169 -0.78413636 170.82050410 
    14012 0.61237692 0.49673266 -0.61502109 236.35280657 
    14013 0.57622760 -0.81306981 -0.08293995 185.82962380 
    14014 Axis -0.11989023 -0.82350618 0.55449428 
    14015 Axis point -11.32022944 0.00000000 222.95993948 
    14016 Rotation angle (degrees) 124.31419778 
    14017 Shift along axis -112.07624075 
    14018  
    14019 Average map value = 0.2652 for 10778 atoms, 6715 outside contour 
    14020 
    14021 > fitmap #13 inMap #3 resolution 15 metric correlation
    14022 
    14023 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14024 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14025 correlation = 0.5941, correlation about mean = 0.2252, overlap = 108 
    14026 steps = 44, shift = 0.0516, angle = 0.0525 degrees 
    14027  
    14028 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14029 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14030 Matrix rotation and translation 
    14031 -0.54069108 -0.30371088 -0.78448243 170.88374999 
    14032 0.61300996 0.49637657 -0.61467786 236.33741075 
    14033 0.57608307 -0.81324649 -0.08220861 185.80001490 
    14034 Axis -0.12015841 -0.82330920 0.55472868 
    14035 Axis point -11.39687762 0.00000000 223.05134621 
    14036 Rotation angle (degrees) 124.28166082 
    14037 Shift along axis -112.04328719 
    14038  
    14039 Average map value = 0.2652 for 10778 atoms, 6713 outside contour 
    14040 
    14041 > fitmap #13 inMap #3 resolution 15 metric correlation
    14042 
    14043 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14044 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14045 correlation = 0.5941, correlation about mean = 0.2251, overlap = 108 
    14046 steps = 48, shift = 0.0526, angle = 0.0343 degrees 
    14047  
    14048 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14049 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14050 Matrix rotation and translation 
    14051 -0.54098771 -0.30360908 -0.78431731 170.82809495 
    14052 0.61260671 0.49669737 -0.61482072 236.35640441 
    14053 0.57623352 -0.81308861 -0.08271424 185.82265944 
    14054 Axis -0.12000026 -0.82346392 0.55453323 
    14055 Axis point -11.36489874 0.00000000 222.98495051 
    14056 Rotation angle (degrees) 124.29835495 
    14057 Shift along axis -112.08554809 
    14058  
    14059 Average map value = 0.2652 for 10778 atoms, 6714 outside contour 
    14060 
    14061 > fitmap #13 inMap #3 resolution 15 metric correlation
    14062 
    14063 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14064 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14065 correlation = 0.5941, correlation about mean = 0.2251, overlap = 108 
    14066 steps = 64, shift = 7.48, angle = 0.00612 degrees 
    14067  
    14068 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14069 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14070 Matrix rotation and translation 
    14071 -0.54091890 -0.30358595 -0.78437372 170.83371769 
    14072 0.61268591 0.49667985 -0.61475595 236.35941235 
    14073 0.57621391 -0.81310795 -0.08266071 185.82330700 
    14074 Axis -0.12004597 -0.82345057 0.55454317 
    14075 Axis point -11.37810726 0.00000000 222.99364521 
    14076 Rotation angle (degrees) 124.29472036 
    14077 Shift along axis -112.09114577 
    14078  
    14079 Average map value = 0.2652 for 10778 atoms, 6715 outside contour 
    14080 
    14081 > fitmap #13 inMap #3 resolution 15 metric correlation
    14082 
    14083 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14084 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14085 correlation = 0.5941, correlation about mean = 0.2252, overlap = 108 
    14086 steps = 40, shift = 0.0627, angle = 0.0411 degrees 
    14087  
    14088 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14089 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14090 Matrix rotation and translation 
    14091 -0.54047019 -0.30358465 -0.78468347 170.90667371 
    14092 0.61320663 0.49644204 -0.61442876 236.33725744 
    14093 0.57608103 -0.81325365 -0.08215203 185.79897769 
    14094 Axis -0.12029646 -0.82331318 0.55469286 
    14095 Axis point -11.42924476 0.00000000 223.05876219 
    14096 Rotation angle (degrees) 124.26977158 
    14097 Shift along axis -112.07768066 
    14098  
    14099 Average map value = 0.2652 for 10778 atoms, 6713 outside contour 
    14100 
    14101 > fitmap #13 inMap #3 resolution 15 metric correlation
    14102 
    14103 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14104 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14105 correlation = 0.5941, correlation about mean = 0.2251, overlap = 108 
    14106 steps = 72, shift = 0.83, angle = 3.47 degrees 
    14107  
    14108 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14109 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14110 Matrix rotation and translation 
    14111 -0.54085816 -0.30357220 -0.78442093 170.84233630 
    14112 0.61275109 0.49666581 -0.61470232 236.35661942 
    14113 0.57620162 -0.81312166 -0.08261160 185.82080888 
    14114 Axis -0.12008198 -0.82343913 0.55455236 
    14115 Axis point -11.38555155 0.00000000 222.99952583 
    14116 Rotation angle (degrees) 124.29139752 
    14117 Shift along axis -112.09300480 
    14118  
    14119 Average map value = 0.2652 for 10778 atoms, 6716 outside contour 
    14120 
    14121 > fitmap #13 inMap #3 resolution 15 metric correlation
    14122 
    14123 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14124 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14125 correlation = 0.5941, correlation about mean = 0.2252, overlap = 108 
    14126 steps = 48, shift = 0.00553, angle = 0.0169 degrees 
    14127  
    14128 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14129 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14130 Matrix rotation and translation 
    14131 -0.54067522 -0.30344260 -0.78459717 170.85905014 
    14132 0.61294766 0.49669219 -0.61448499 236.35903655 
    14133 0.57616424 -0.81315392 -0.08255476 185.81972562 
    14134 Axis -0.12021982 -0.82343273 0.55453199 
    14135 Axis point -11.41775492 0.00000000 223.00696212 
    14136 Rotation angle (degrees) 124.28216904 
    14137 Shift along axis -112.12342886 
    14138  
    14139 Average map value = 0.2652 for 10778 atoms, 6718 outside contour 
    14140 
    14141 > fitmap #13 inMap #3 resolution 15 metric correlation
    14142 
    14143 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14144 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14145 correlation = 0.5627, correlation about mean = 0.1485, overlap = 88.73 
    14146 steps = 940, shift = 24.3, angle = 76.2 degrees 
    14147  
    14148 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14149 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14150 Matrix rotation and translation 
    14151 -0.04858265 0.71067080 -0.70184504 236.74996735 
    14152 -0.97287130 -0.19279360 -0.12787452 153.21829828 
    14153 -0.22618798 0.67659248 0.70075774 232.50498101 
    14154 Axis 0.41778624 -0.24702440 -0.87431893 
    14155 Axis point 225.10689483 -84.60296619 0.00000000 
    14156 Rotation angle (degrees) 105.68267187 
    14157 Shift along axis -142.22128579 
    14158  
    14159 Average map value = 0.2142 for 10778 atoms, 7609 outside contour 
    14160 
    14161 > fitmap #13 inMap #3 resolution 15 metric correlation
    14162 
    14163 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14164 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14165 correlation = 0.5627, correlation about mean = 0.1485, overlap = 88.73 
    14166 steps = 68, shift = 0.0198, angle = 0.0305 degrees 
    14167  
    14168 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14169 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14170 Matrix rotation and translation 
    14171 -0.04811130 0.71077353 -0.70177348 236.77400208 
    14172 -0.97294270 -0.19230395 -0.12806840 153.25162511 
    14173 -0.22598150 0.67662391 0.70079400 232.50236943 
    14174 Axis 0.41784256 -0.24705858 -0.87428237 
    14175 Axis point 225.17233922 -84.67643312 0.00000000 
    14176 Rotation angle (degrees) 105.65299991 
    14177 Shift along axis -142.20059555 
    14178  
    14179 Average map value = 0.2142 for 10778 atoms, 7613 outside contour 
    14180 
    14181 > fitmap #13 inMap #3 resolution 15 metric correlation
    14182 
    14183 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14184 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14185 correlation = 0.5549, correlation about mean = 0.1738, overlap = 91.66 
    14186 steps = 124, shift = 15.9, angle = 11.9 degrees 
    14187  
    14188 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14189 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14190 Matrix rotation and translation 
    14191 0.83954253 0.38020665 0.38808628 220.73760317 
    14192 0.05881172 0.64652368 -0.76062352 226.76197023 
    14193 -0.54010115 0.66139991 0.52042355 194.94043847 
    14194 Axis 0.82279339 0.53705619 -0.18596151 
    14195 Axis point 0.00000000 -217.25199808 210.45721219 
    14196 Rotation angle (degrees) 59.78508263 
    14197 Shift along axis 267.15394199 
    14198  
    14199 Average map value = 0.2215 for 10778 atoms, 7536 outside contour 
    14200 
    14201 > fitmap #13 inMap #3 resolution 15 metric correlation
    14202 
    14203 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14204 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14205 correlation = 0.5548, correlation about mean = 0.1737, overlap = 91.64 
    14206 steps = 48, shift = 0.0739, angle = 0.24 degrees 
    14207  
    14208 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14209 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14210 Matrix rotation and translation 
    14211 0.83926664 0.38250182 0.38642408 220.89497610 
    14212 0.05486105 0.64750471 -0.76008405 226.67241394 
    14213 -0.54094500 0.65911291 0.52244469 194.77565157 
    14214 Axis 0.82191439 0.53707696 -0.18975003 
    14215 Axis point 0.00000000 -218.91230479 211.54715716 
    14216 Rotation angle (degrees) 59.69466020 
    14217 Shift along axis 266.33860495 
    14218  
    14219 Average map value = 0.2214 for 10778 atoms, 7530 outside contour 
    14220 
    14221 > fitmap #13 inMap #3 resolution 15 metric correlation
    14222 
    14223 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14224 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14225 correlation = 0.5551, correlation about mean = 0.1284, overlap = 95.65 
    14226 steps = 452, shift = 11.7, angle = 61 degrees 
    14227  
    14228 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14229 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14230 Matrix rotation and translation 
    14231 0.67765978 -0.45950656 0.57413471 175.39322001 
    14232 -0.71189064 -0.60565189 0.35552394 130.47178956 
    14233 0.18436020 -0.64964550 -0.73754449 170.45803018 
    14234 Axis -0.90781270 0.35202250 -0.22793915 
    14235 Axis point 0.00000000 121.83148707 32.59195722 
    14236 Rotation angle (degrees) 146.38417197 
    14237 Shift along axis -152.14924709 
    14238  
    14239 Average map value = 0.2318 for 10778 atoms, 7515 outside contour 
    14240 
    14241 > fitmap #13 inMap #3 resolution 15 metric correlation
    14242 
    14243 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14244 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14245 correlation = 0.5536, correlation about mean = 0.1407, overlap = 96.76 
    14246 steps = 112, shift = 28.9, angle = 14.2 degrees 
    14247  
    14248 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14249 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14250 Matrix rotation and translation 
    14251 0.50580435 -0.63423788 0.58472558 160.40890420 
    14252 -0.85448309 -0.46139754 0.23868543 142.14103663 
    14253 0.11840761 -0.62036635 -0.77532256 176.92191540 
    14254 Axis -0.85736855 0.46540427 -0.21981366 
    14255 Axis point 0.00000000 138.52068224 37.59896282 
    14256 Rotation angle (degrees) 149.93503363 
    14257 Shift along axis -110.26635758 
    14258  
    14259 Average map value = 0.2366 for 10778 atoms, 7344 outside contour 
    14260 
    14261 > fitmap #13 inMap #3 resolution 15 metric correlation
    14262 
    14263 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14264 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14265 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.08 
    14266 steps = 156, shift = 23.5, angle = 46.5 degrees 
    14267  
    14268 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14269 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14270 Matrix rotation and translation 
    14271 0.15983713 -0.05412089 0.98565857 175.04370798 
    14272 -0.93632050 -0.32456693 0.13401489 151.14921595 
    14273 0.31265918 -0.94431299 -0.10255241 172.75853881 
    14274 Axis -0.69693004 0.43496371 -0.57017111 
    14275 Axis point 0.00000000 158.91505020 -59.44516805 
    14276 Rotation angle (degrees) 129.31927320 
    14277 Shift along axis -154.75072323 
    14278  
    14279 Average map value = 0.216 for 10778 atoms, 7279 outside contour 
    14280 
    14281 > fitmap #13 inMap #3 resolution 15 metric correlation
    14282 
    14283 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14284 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14285 correlation = 0.5566, correlation about mean = 0.1935, overlap = 88.13 
    14286 steps = 80, shift = 10.5, angle = 0.0526 degrees 
    14287  
    14288 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14289 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14290 Matrix rotation and translation 
    14291 0.16065197 -0.05449927 0.98550523 175.11591638 
    14292 -0.93618033 -0.32470639 0.13465474 151.12016539 
    14293 0.31266127 -0.94424328 -0.10318592 172.75945001 
    14294 Axis -0.69728307 0.43485362 -0.56982335 
    14295 Axis point 0.00000000 158.87077592 -59.35576831 
    14296 Rotation angle (degrees) 129.31772298 
    14297 Shift along axis -154.83258256 
    14298  
    14299 Average map value = 0.2161 for 10778 atoms, 7276 outside contour 
    14300 
    14301 > fitmap #13 inMap #3 resolution 15 metric correlation
    14302 
    14303 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14304 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14305 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.1 
    14306 steps = 44, shift = 0.0462, angle = 0.0481 degrees 
    14307  
    14308 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14309 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14310 Matrix rotation and translation 
    14311 0.15990795 -0.05413787 0.98564615 175.06204028 
    14312 -0.93626956 -0.32469397 0.13406302 151.12797214 
    14313 0.31277548 -0.94426834 -0.10260884 172.76396614 
    14314 Axis -0.69697386 0.43490645 -0.57016122 
    14315 Axis point 0.00000000 158.88968511 -59.42820154 
    14316 Rotation angle (degrees) 129.32344496 
    14317 Shift along axis -154.79045014 
    14318  
    14319 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14320 
    14321 > fitmap #13 inMap #3 resolution 15 metric correlation
    14322 
    14323 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14324 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14325 correlation = 0.4612, correlation about mean = 0.1711, overlap = 74 
    14326 steps = 64, shift = 0.619, angle = 2.48 degrees 
    14327  
    14328 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14329 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14330 Matrix rotation and translation 
    14331 0.77940594 0.51145874 0.36185105 226.67145904 
    14332 0.52488743 -0.84840273 0.06859896 171.46522192 
    14333 0.34208095 0.13646460 -0.92970849 199.93235150 
    14334 Axis 0.94322160 0.27477209 0.18663686 
    14335 Axis point 0.00000000 51.34040111 78.39411491 
    14336 Rotation angle (degrees) 177.93831356 
    14337 Shift along axis 298.23001919 
    14338  
    14339 Average map value = 0.1776 for 10778 atoms, 8271 outside contour 
    14340 
    14341 > fitmap #13 inMap #3 resolution 15 metric correlation
    14342 
    14343 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14344 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14345 correlation = 0.521, correlation about mean = 0.1509, overlap = 94.72 
    14346 steps = 124, shift = 16, angle = 37.1 degrees 
    14347  
    14348 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14349 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14350 Matrix rotation and translation 
    14351 0.63178507 -0.36181350 0.68552061 179.22106413 
    14352 0.32607943 -0.67826601 -0.65850380 179.10169461 
    14353 0.70322091 0.63956706 -0.31053843 230.64343919 
    14354 Axis 0.88353261 -0.01204772 0.46821468 
    14355 Axis point 0.00000000 64.28464177 112.97995799 
    14356 Rotation angle (degrees) 132.72729755 
    14357 Shift along axis 264.18053174 
    14358  
    14359 Average map value = 0.2316 for 10778 atoms, 7380 outside contour 
    14360 
    14361 > fitmap #13 inMap #3 resolution 15 metric correlation
    14362 
    14363 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14364 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14365 correlation = 0.5211, correlation about mean = 0.1509, overlap = 94.73 
    14366 steps = 44, shift = 0.0383, angle = 0.0341 degrees 
    14367  
    14368 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14369 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14370 Matrix rotation and translation 
    14371 0.63192433 -0.36139246 0.68561434 179.20116900 
    14372 0.32654066 -0.67812898 -0.65841637 179.11799776 
    14373 0.70288167 0.63995030 -0.31051690 230.64050834 
    14374 Axis 0.88356855 -0.01175082 0.46815440 
    14375 Axis point 0.00000000 64.25613133 112.98711579 
    14376 Rotation angle (degrees) 132.71568371 
    14377 Shift along axis 264.20710119 
    14378  
    14379 Average map value = 0.2316 for 10778 atoms, 7382 outside contour 
    14380 
    14381 > hide #!3 models
    14382 
    14383 > select #13:63-68
    14384 
    14385 189 atoms, 203 bonds, 6 residues, 1 model selected 
    14386 
    14387 > tile
    14388 
    14389 3 models tiled 
    14390 
    14391 > tile
    14392 
    14393 3 models tiled 
    14394 
    14395 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    14396 got 2 atomic models, 0 maps. 
    14397 
    14398 > select add #9
    14399 
    14400 1657 atoms, 1566 bonds, 312 residues, 2 models selected 
    14401 
    14402 > select add #13
    14403 
    14404 12246 atoms, 12987 bonds, 642 residues, 2 models selected 
    14405 
    14406 > select subtract #13
    14407 
    14408 1468 atoms, 1363 bonds, 306 residues, 1 model selected 
    14409 
    14410 > view matrix models
    14411 > #9,0.8309,0.056325,-0.55356,306.28,-0.10414,-0.96154,-0.25415,188.9,-0.54659,0.26882,-0.79308,95.61
    14412 
    14413 > ui mousemode right "translate selected models"
    14414 
    14415 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    14416 got 2 atomic models, 0 maps. 
    14417 
    14418 [Repeated 3 time(s)]
    14419 
    14420 > ui tool show "Scale Bar"
    14421 
    14422 > scalebar off
    14423 
    14424 > scalebar 50
    14425 
    14426 > view matrix models
    14427 > #9,-0.066751,-0.11539,0.99107,265.41,-0.95389,0.29872,-0.029466,140.4,-0.29265,-0.94734,-0.13001,77.32
    14428 
    14429 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    14430 got 2 atomic models, 0 maps. 
    14431 
    14432 > view matrix models
    14433 > #9,-0.68589,-0.0065446,-0.72767,314.58,0.47051,0.75884,-0.45032,180.77,0.55513,-0.65125,-0.5174,96.643
    14434 
    14435 > ui tool show ViewDockX
    14436 
    14437 No suitable models found for ViewDockX 
    14438 
    14439 > ui tool show ViewDockX
    14440 
    14441 No suitable models found for ViewDockX 
    14442 
    14443 > view matrix models
    14444 > #9,-0.99583,0.04987,0.076444,302.79,-0.033725,0.57722,-0.81589,181.82,-0.084814,-0.81507,-0.57313,94.141
    14445 
    14446 > view matrix models
    14447 > #9,-0.87843,0.089993,0.46932,287.87,-0.35715,0.52887,-0.76989,165.36,-0.3175,-0.84392,-0.43244,94.64
    14448 
    14449 > view matrix models
    14450 > #9,-0.17833,0.2497,0.95176,262.25,-0.83274,0.47695,-0.28117,145.39,-0.52415,-0.84271,0.12288,61.077
    14451 
    14452 > tile
    14453 
    14454 3 models tiled 
    14455 
    14456 > fitmap #13 inMap #3 resolution 15 metric correlation
    14457 
    14458 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14459 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14460 correlation = 0.4618, correlation about mean = 0.1224, overlap = 66.79 
    14461 steps = 208, shift = 18.3, angle = 35.5 degrees 
    14462  
    14463 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14464 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14465 Matrix rotation and translation 
    14466 0.61509516 -0.66490325 0.42374680 168.37858463 
    14467 -0.33965771 0.26155925 0.90344850 171.05193985 
    14468 -0.71154086 -0.69963573 -0.06495565 170.75086764 
    14469 Axis -0.80511857 0.57017664 0.16334838 
    14470 Axis point 0.00000000 242.56978737 2.53268969 
    14471 Rotation angle (degrees) 95.40243551 
    14472 Shift along axis -10.14302662 
    14473  
    14474 Average map value = 0.165 for 10778 atoms, 8236 outside contour 
    14475 
    14476 > fitmap #13 inMap #3 resolution 15 metric correlation
    14477 
    14478 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14479 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14480 correlation = 0.4618, correlation about mean = 0.1224, overlap = 66.8 
    14481 steps = 84, shift = 0.00519, angle = 0.014 degrees 
    14482  
    14483 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14484 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14485 Matrix rotation and translation 
    14486 0.61507232 -0.66495249 0.42370267 168.37864732 
    14487 -0.33946361 0.26169295 0.90348274 171.05723390 
    14488 -0.71165322 -0.69953892 -0.06476705 170.75134352 
    14489 Axis -0.80507570 0.57020280 0.16346828 
    14490 Axis point -0.00000000 242.59597651 2.53416876 
    14491 Rotation angle (degrees) 95.39381821 
    14492 Shift along axis -10.10781595 
    14493  
    14494 Average map value = 0.165 for 10778 atoms, 8237 outside contour 
    14495 
    14496 > fitmap #13 inMap #3 resolution 15 metric correlation
    14497 
    14498 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14499 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14500 correlation = 0.5325, correlation about mean = 0.1728, overlap = 71.78 
    14501 steps = 136, shift = 17.3, angle = 31.1 degrees 
    14502  
    14503 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14504 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14505 Matrix rotation and translation 
    14506 0.99667241 -0.03970518 -0.07118574 221.63283588 
    14507 0.04783640 -0.42219101 0.90524374 155.32704599 
    14508 -0.06599686 -0.90563677 -0.41888680 191.95398916 
    14509 Axis -0.99882948 -0.00286203 0.04828541 
    14510 Axis point 0.00000000 141.86732651 51.96801736 
    14511 Rotation angle (degrees) 114.97373434 
    14512 Shift along axis -212.54938351 
    14513  
    14514 Average map value = 0.1718 for 10778 atoms, 8155 outside contour 
    14515 
    14516 > fitmap #13 inMap #3 resolution 15 metric correlation
    14517 
    14518 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14519 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14520 correlation = 0.5325, correlation about mean = 0.1729, overlap = 71.77 
    14521 steps = 40, shift = 0.0559, angle = 0.155 degrees 
    14522  
    14523 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14524 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14525 Matrix rotation and translation 
    14526 0.99686401 -0.03962426 -0.06849716 221.56154822 
    14527 0.04542291 -0.42226949 0.90533145 155.23057666 
    14528 -0.06479737 -0.90560373 -0.41914544 191.99948237 
    14529 Axis -0.99889697 -0.00204078 0.04691132 
    14530 Axis point 0.00000000 141.82272488 51.81913313 
    14531 Rotation angle (degrees) 114.97833294 
    14532 Shift along axis -212.62700093 
    14533  
    14534 Average map value = 0.1717 for 10778 atoms, 8156 outside contour 
    14535 
    14536 > fitmap #13 inMap #3 resolution 15 metric correlation
    14537 
    14538 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14539 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14540 correlation = 0.5566, correlation about mean = 0.1935, overlap = 88.13 
    14541 steps = 136, shift = 27.8, angle = 20.7 degrees 
    14542  
    14543 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14544 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14545 Matrix rotation and translation 
    14546 0.16049043 -0.05430156 0.98554245 175.11560706 
    14547 -0.93619233 -0.32470992 0.13456314 151.12138555 
    14548 0.31270846 -0.94425342 -0.10294954 172.75504673 
    14549 Axis -0.69720413 0.43483077 -0.56993737 
    14550 Axis point 0.00000000 158.87089711 -59.39319337 
    14551 Rotation angle (degrees) 129.31508292 
    14552 Shift along axis -154.83865281 
    14553  
    14554 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14555 
    14556 > fitmap #13 inMap #3 resolution 15 metric correlation
    14557 
    14558 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14559 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14560 correlation = 0.5566, correlation about mean = 0.1934, overlap = 88.13 
    14561 steps = 48, shift = 0.0133, angle = 0.0286 degrees 
    14562  
    14563 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14564 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14565 Matrix rotation and translation 
    14566 0.16090828 -0.05455747 0.98546018 175.13128167 
    14567 -0.93612450 -0.32477722 0.13487222 151.11798092 
    14568 0.31269676 -0.94421552 -0.10333193 172.76469775 
    14569 Axis -0.69739113 0.43479248 -0.56973775 
    14570 Axis point 0.00000000 158.85569593 -59.32872077 
    14571 Rotation angle (degrees) 129.31626165 
    14572 Shift along axis -154.86061078 
    14573  
    14574 Average map value = 0.2161 for 10778 atoms, 7277 outside contour 
    14575 
    14576 > fitmap #13 inMap #3 resolution 15 metric correlation
    14577 
    14578 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14579 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14580 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.11 
    14581 steps = 40, shift = 0.0416, angle = 0.0503 degrees 
    14582  
    14583 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14584 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14585 Matrix rotation and translation 
    14586 0.16023391 -0.05401524 0.98559992 175.08974489 
    14587 -0.93618805 -0.32478942 0.13440091 151.11983015 
    14588 0.31285277 -0.94424250 -0.10261070 172.76481307 
    14589 Axis -0.69709118 0.43477400 -0.57011880 
    14590 Axis point 0.00000000 158.86064501 -59.42203525 
    14591 Rotation angle (degrees) 129.31497844 
    14592 Shift along axis -154.84701256 
    14593  
    14594 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14595 
    14596 > fitmap #13 inMap #3 resolution 15 metric correlation
    14597 
    14598 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14599 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14600 correlation = 0.5566, correlation about mean = 0.1935, overlap = 88.12 
    14601 steps = 44, shift = 0.0245, angle = 0.0312 degrees 
    14602  
    14603 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14604 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14605 Matrix rotation and translation 
    14606 0.16017103 -0.05452748 0.98558194 175.09332041 
    14607 -0.93627715 -0.32461607 0.13419891 151.12896333 
    14608 0.31261824 -0.94427267 -0.10304692 172.75572740 
    14609 Axis -0.69710034 0.43498895 -0.56994362 
    14610 Axis point 0.00000000 158.90366936 -59.38832302 
    14611 Rotation angle (degrees) 129.32704123 
    14612 Shift along axis -154.77920805 
    14613  
    14614 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14615 
    14616 > fitmap #13 inMap #3 resolution 15 metric correlation
    14617 
    14618 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14619 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14620 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.08 
    14621 steps = 48, shift = 0.0615, angle = 0.0514 degrees 
    14622  
    14623 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14624 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14625 Matrix rotation and translation 
    14626 0.15935353 -0.05418959 0.98573308 175.02208172 
    14627 -0.93639474 -0.32455036 0.13353574 151.14350633 
    14628 0.31268382 -0.94431471 -0.10246109 172.76182045 
    14629 Axis -0.69676010 0.43508250 -0.57028816 
    14630 Axis point 0.00000000 158.93403749 -59.46030323 
    14631 Rotation angle (degrees) 129.33318806 
    14632 Shift along axis -154.71252821 
    14633  
    14634 Average map value = 0.216 for 10778 atoms, 7278 outside contour 
    14635 
    14636 > fitmap #13 inMap #3 resolution 15 metric correlation
    14637 
    14638 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14639 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14640 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.08 
    14641 steps = 44, shift = 0.00709, angle = 0.0104 degrees 
    14642  
    14643 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14644 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14645 Matrix rotation and translation 
    14646 0.15951575 -0.05411197 0.98571111 175.03428193 
    14647 -0.93636050 -0.32457684 0.13371138 151.13683376 
    14648 0.31270365 -0.94431006 -0.10244343 172.75984387 
    14649 Axis -0.69681401 0.43502013 -0.57026986 
    14650 Axis point 0.00000000 158.91916448 -59.46050948 
    14651 Rotation angle (degrees) 129.32750649 
    14652 Shift along axis -154.73850761 
    14653  
    14654 Average map value = 0.216 for 10778 atoms, 7277 outside contour 
    14655 
    14656 > fitmap #13 inMap #3 resolution 15 metric correlation
    14657 
    14658 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14659 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14660 correlation = 0.5566, correlation about mean = 0.1935, overlap = 88.13 
    14661 steps = 40, shift = 0.0647, angle = 0.0754 degrees 
    14662  
    14663 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14664 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14665 Matrix rotation and translation 
    14666 0.16075921 -0.05444507 0.98549073 175.12183719 
    14667 -0.93613812 -0.32478230 0.13476541 151.11643352 
    14668 0.31273266 -0.94422026 -0.10317986 172.76252541 
    14669 Axis -0.69732593 0.43478950 -0.56981982 
    14670 Axis point 0.00000000 158.85504984 -59.34848420 
    14671 Rotation angle (degrees) 129.31633854 
    14672 Shift along axis -154.85667169 
    14673  
    14674 Average map value = 0.2161 for 10778 atoms, 7276 outside contour 
    14675 
    14676 > fitmap #13 inMap #3 resolution 15 metric correlation
    14677 
    14678 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14679 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14680 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.11 
    14681 steps = 40, shift = 0.0344, angle = 0.0415 degrees 
    14682  
    14683 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14684 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14685 Matrix rotation and translation 
    14686 0.16019913 -0.05400149 0.98560633 175.08764983 
    14687 -0.93619282 -0.32478747 0.13437242 151.11989166 
    14688 0.31285632 -0.94424396 -0.10258648 172.76507620 
    14689 Axis -0.69707689 0.43477783 -0.57013336 
    14690 Axis point 0.00000000 158.86169738 -59.42527394 
    14691 Rotation angle (degrees) 129.31529736 
    14692 Shift along axis -154.84510930 
    14693  
    14694 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14695 
    14696 > fitmap #13 inMap #3 resolution 15 metric correlation
    14697 
    14698 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14699 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14700 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.1 
    14701 steps = 40, shift = 0.0085, angle = 0.0106 degrees 
    14702  
    14703 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14704 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14705 Matrix rotation and translation 
    14706 0.16011373 -0.05415471 0.98561180 175.07212320 
    14707 -0.93623253 -0.32472360 0.13425003 151.12529507 
    14708 0.31278118 -0.94425715 -0.10269411 172.76620785 
    14709 Axis -0.69705397 0.43485965 -0.57009898 
    14710 Axis point 0.00000000 158.87841484 -59.41182067 
    14711 Rotation angle (degrees) 129.32007999 
    14712 Shift along axis -154.81026453 
    14713  
    14714 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14715 
    14716 > fitmap #13 inMap #3 resolution 15 metric correlation
    14717 
    14718 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14719 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14720 correlation = 0.5566, correlation about mean = 0.1935, overlap = 88.13 
    14721 steps = 44, shift = 0.0402, angle = 0.0222 degrees 
    14722  
    14723 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14724 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14725 Matrix rotation and translation 
    14726 0.16024482 -0.05450381 0.98557125 175.10226651 
    14727 -0.93626007 -0.32463408 0.13427449 151.12662510 
    14728 0.31263158 -0.94426785 -0.10305067 172.75508492 
    14729 Axis -0.69712686 0.43496144 -0.56993218 
    14730 Axis point 0.00000000 158.89764215 -59.38832820 
    14731 Rotation angle (degrees) 129.32511422 
    14732 Shift along axis -154.79292105 
    14733  
    14734 Average map value = 0.2161 for 10778 atoms, 7276 outside contour 
    14735 
    14736 > fitmap #13 inMap #3 resolution 15 metric correlation
    14737 
    14738 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14739 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14740 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.07 
    14741 steps = 48, shift = 0.0702, angle = 0.0632 degrees 
    14742  
    14743 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14744 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14745 Matrix rotation and translation 
    14746 0.15923591 -0.05413033 0.98575534 175.01787396 
    14747 -0.93644492 -0.32443887 0.13345473 151.14760972 
    14748 0.31259344 -0.94435641 -0.10235239 172.75416225 
    14749 Axis -0.69669684 0.43513168 -0.57032792 
    14750 Axis point 0.00000000 158.95030550 -59.48792355 
    14751 Rotation angle (degrees) 129.32938926 
    14752 Shift along axis -154.69180879 
    14753  
    14754 Average map value = 0.216 for 10778 atoms, 7279 outside contour 
    14755 
    14756 > fitmap #13 inMap #3 resolution 15 metric correlation
    14757 
    14758 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14759 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14760 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.09 
    14761 steps = 156, shift = 1.43, angle = 44.3 degrees 
    14762  
    14763 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14764 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14765 Matrix rotation and translation 
    14766 0.15977635 -0.05403610 0.98567306 175.04550236 
    14767 -0.93628560 -0.32468583 0.13397097 151.12983753 
    14768 0.31279484 -0.94427693 -0.10247034 172.76658376 
    14769 Axis -0.69691438 0.43490788 -0.57023284 
    14770 Axis point 0.00000000 158.89199487 -59.44186249 
    14771 Rotation angle (degrees) 129.32288856 
    14772 Shift along axis -154.78135043 
    14773  
    14774 Average map value = 0.216 for 10778 atoms, 7277 outside contour 
    14775 
    14776 > fitmap #13 inMap #3 resolution 15 metric correlation
    14777 
    14778 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14779 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14780 correlation = 0.5566, correlation about mean = 0.1936, overlap = 88.1 
    14781 steps = 164, shift = 1.29, angle = 45.8 degrees 
    14782  
    14783 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14784 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14785 Matrix rotation and translation 
    14786 0.15994937 -0.05410045 0.98564147 175.06144922 
    14787 -0.93625613 -0.32471254 0.13411217 151.12728913 
    14788 0.31279465 -0.94426406 -0.10258944 172.76653549 
    14789 Axis -0.69698728 0.43488132 -0.57016398 
    14790 Axis point 0.00000000 158.88459378 -59.42645545 
    14791 Rotation angle (degrees) 129.32188105 
    14792 Shift along axis -154.79842532 
    14793  
    14794 Average map value = 0.2161 for 10778 atoms, 7275 outside contour 
    14795 
    14796 > fitmap #13 inMap #3 resolution 15 metric correlation
    14797 
    14798 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14799 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14800 correlation = 0.4832, correlation about mean = 0.08746, overlap = 75.58 
    14801 steps = 92, shift = 16.2, angle = 16.9 degrees 
    14802  
    14803 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14804 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14805 Matrix rotation and translation 
    14806 -0.22637985 0.77655855 -0.58797004 227.35394463 
    14807 0.72580050 0.53705544 0.42986610 230.48944722 
    14808 0.64958874 -0.32943592 -0.68520523 209.79765192 
    14809 Axis -0.52264238 -0.85183584 -0.03493776 
    14810 Axis point -7.20050958 0.00000000 115.03231517 
    14811 Rotation angle (degrees) 133.41398780 
    14812 Shift along axis -322.49383848 
    14813  
    14814 Average map value = 0.1839 for 10778 atoms, 8062 outside contour 
    14815 
    14816 > fitmap #13 inMap #3 resolution 15 metric correlation
    14817 
    14818 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14819 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14820 correlation = 0.4832, correlation about mean = 0.08767, overlap = 75.61 
    14821 steps = 28, shift = 0.081, angle = 0.0581 degrees 
    14822  
    14823 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14824 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14825 Matrix rotation and translation 
    14826 -0.22613784 0.77601144 -0.58878494 227.43036214 
    14827 0.72574946 0.53739119 0.42953253 230.51474770 
    14828 0.64973004 -0.33017679 -0.68471449 209.76045994 
    14829 Axis -0.52255939 -0.85190166 -0.03457226 
    14830 Axis point -7.22085841 0.00000000 115.10567397 
    14831 Rotation angle (degrees) 133.37186361 
    14832 Shift along axis -322.47366203 
    14833  
    14834 Average map value = 0.184 for 10778 atoms, 8052 outside contour 
    14835 
    14836 > fitmap #13 inMap #3 resolution 15 metric correlation
    14837 
    14838 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14839 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14840 correlation = 0.5402, correlation about mean = 0.1433, overlap = 87.67 
    14841 steps = 200, shift = 28.7, angle = 20.3 degrees 
    14842  
    14843 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14844 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14845 Matrix rotation and translation 
    14846 -0.84992894 -0.37029252 0.37483867 143.29808717 
    14847 0.35973749 0.11197978 0.92630950 205.73418187 
    14848 -0.38497983 0.92214084 0.03803323 241.03090680 
    14849 Axis -0.00395620 0.72109513 0.69282477 
    14850 Axis point 76.74419989 0.00000000 -6.86186477 
    14851 Rotation angle (degrees) 148.20710322 
    14852 Shift along axis 314.77918299 
    14853  
    14854 Average map value = 0.218 for 10778 atoms, 7617 outside contour 
    14855 
    14856 > fitmap #13 inMap #3 resolution 15 metric correlation
    14857 
    14858 Fit map Kendall_Fran_SHAPE_MaP.pdb map 15 in map
    14859 cryosparc_P12_J2741_004_volume_map_sharp.mrc using 2552 points 
    14860 correlation = 0.5402, correlation about mean = 0.1432, overlap = 87.66 
    14861 steps = 156, shift = 0.0158, angle = 0.0102 degrees 
    14862  
    14863 Position of Kendall_Fran_SHAPE_MaP.pdb map 15 (#15) relative to
    14864 cryosparc_P12_J2741_004_volume_map_sharp.mrc (#3) coordinates: 
    14865 Matrix rotation and translation 
    14866 -0.84996351 -0.37036368 0.37468994 143.29515567 
    14867 0.35958027 0.11197574 0.92637103 205.71344185 
    14868 -0.38505037 0.92211275 0.03800016 241.02705194 
    14869 Axis -0.00404170 0.72110006 0.69281914 
    14870 Axis point 76.75797321 0.00000000 -6.85317863 
    14871 Rotation angle (degrees) 148.21100132 
    14872 Shift along axis 314.74897549 
    14873  
    14874 Average map value = 0.218 for 10778 atoms, 7617 outside contour 
    14875 
    14876 > view matrix models
    14877 > #9,0.98081,-0.14932,-0.12532,295.8,0.11515,0.9625,-0.24562,147.87,0.1573,0.22647,0.96123,63.947
    14878 
    14879 Fit in map shortcut requires 1 displayed atomic model and 1 map or two maps,
    14880 got 2 atomic models, 0 maps. 
    14881 
    14882 > view matrix models
    14883 > #9,-0.70193,-0.54603,-0.45732,267.45,0.66073,-0.25947,-0.70435,120.32,0.26593,-0.79658,0.54291,31.554
    14884 
    14885 > close
    14886 
    14887 > open
    14888 > /Users/francescappadoo/Downloads/rnacomposer-2024-07-05-162506/Kendall.pdb
    14889 
    14890 Chain information for Kendall.pdb 
    14891 --- 
    14892 Chain | Description 
    14893 1.1/A 1.2/A 1.3/A 1.4/A 1.5/A 1.6/A 1.7/A 1.8/A 1.9/A 1.10/A | No description available 
    14894  
    14895 
    14896 > tile
    14897 
    14898 10 models tiled 
    14899 
    14900 > tile
    14901 
    14902 10 models tiled 
    14903 
    14904 > select add #1.1
    14905 
    14906 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14907 
    14908 > select add #1.2
    14909 
    14910 21556 atoms, 23248 bonds, 672 residues, 2 models selected 
    14911 
    14912 > select subtract #1.1
    14913 
    14914 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14915 
    14916 > view matrix models
    14917 > #1.2,-0.77608,0.42708,0.464,246,-0.42804,0.18361,-0.88491,-39.84,-0.46313,-0.88537,0.040314,-1.4679
    14918 
    14919 > ui mousemode right "rotate selected models"
    14920 
    14921 > view matrix models
    14922 > #1.2,-0.99685,0.0053658,0.079142,235.11,-0.03062,0.89435,-0.44632,-29.436,-0.073175,-0.44733,-0.89137,-40.89
    14923 
    14924 > select subtract #1.2
    14925 
    14926 Nothing selected 
    14927 
    14928 > select add #1.1
    14929 
    14930 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14931 
    14932 > view matrix models
    14933 > #1.1,-0.84624,0.45526,0.27681,12.141,-0.26343,0.094082,-0.96008,-13.671,-0.46313,-0.88537,0.040314,-14.144
    14934 
    14935 > view matrix models
    14936 > #1.1,-0.94779,0.15957,0.27611,10.526,-0.25925,0.11866,-0.95849,-13.508,-0.18572,-0.98003,-0.071099,-16.38
    14937 
    14938 > select subtract #1.1
    14939 
    14940 Nothing selected 
    14941 
    14942 > select add #1.3
    14943 
    14944 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14945 
    14946 > view matrix models
    14947 > #1.3,-0.83903,0.45263,0.30191,438.71,-0.28555,0.106,-0.95248,-5.9169,-0.46313,-0.88537,0.040314,-5.1623
    14948 
    14949 > view matrix models
    14950 > #1.3,-0.42479,-0.28635,-0.85881,436.79,0.29892,0.85108,-0.43163,-10.677,0.85452,-0.44007,-0.27594,-13.804
    14951 
    14952 > select subtract #1.3
    14953 
    14954 Nothing selected 
    14955 
    14956 > select add #1.3
    14957 
    14958 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14959 
    14960 > select subtract #1.3
    14961 
    14962 Nothing selected 
    14963 
    14964 > select add #1.4
    14965 
    14966 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14967 
    14968 > view matrix models
    14969 > #1.4,0.46433,0.34235,0.81682,649.68,0.2095,0.85364,-0.47687,-9.0617,-0.86053,0.39255,0.32464,-16.519
    14970 
    14971 > select subtract #1.4
    14972 
    14973 Nothing selected 
    14974 
    14975 > select add #1.5
    14976 
    14977 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14978 
    14979 > view matrix models
    14980 > #1.5,-0.77504,0.42843,0.4645,10.53,-0.22508,0.49968,-0.83645,-249,-0.59047,-0.75283,-0.29084,-36.702
    14981 
    14982 > view matrix models
    14983 > #1.5,-0.7507,0.44259,0.49047,11.965,0.039705,0.7713,-0.63523,-235.24,-0.65945,-0.4574,-0.59659,-46.06
    14984 
    14985 > select subtract #1.5
    14986 
    14987 Nothing selected 
    14988 
    14989 > select add #1.6
    14990 
    14991 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    14992 
    14993 > view matrix models
    14994 > #1.6,0.3037,0.42988,0.85027,224.32,0.02731,0.88813,-0.45878,-234.87,-0.95238,0.16255,0.25799,-37.932
    14995 
    14996 > select subtract #1.6
    14997 
    14998 Nothing selected 
    14999 
    15000 > select add #1.7
    15001 
    15002 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15003 
    15004 > view matrix models
    15005 > #1.7,-0.62352,-0.17127,0.76281,453.65,-0.57891,0.75689,-0.30326,-238.5,-0.52543,-0.6307,-0.57109,-26.497
    15006 
    15007 > select subtract #1.7
    15008 
    15009 Nothing selected 
    15010 
    15011 > select add #1.8
    15012 
    15013 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15014 
    15015 > view matrix models
    15016 > #1.8,-0.94566,-0.23092,0.22889,646.42,-0.25693,0.96215,-0.090827,-235,-0.19926,-0.1447,-0.9692,-28.549
    15017 
    15018 > select subtract #1.8
    15019 
    15020 Nothing selected 
    15021 
    15022 > select add #1.9
    15023 
    15024 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15025 
    15026 > view matrix models
    15027 > #1.9,-0.28764,0.063823,0.95561,-1.3162,-0.93083,-0.2535,-0.26325,-445.56,0.22545,-0.96523,0.13233,-4.2972
    15028 
    15029 > select add #1.10
    15030 
    15031 21556 atoms, 23248 bonds, 672 residues, 2 models selected 
    15032 
    15033 > select subtract #1.9
    15034 
    15035 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15036 
    15037 > view matrix models
    15038 > #1.10,-0.32208,0.20437,0.92439,228.03,-0.19088,0.94235,-0.27484,-455.15,-0.92727,-0.26497,-0.2645,-9.0846
    15039 
    15040 > select subtract #1.10
    15041 
    15042 Nothing selected 
    15043 
    15044 > select #1:63-68
    15045 
    15046 1890 atoms, 2030 bonds, 60 residues, 10 models selected 
    15047 
    15048 > hide #1.6 models
    15049 
    15050 > show #1.6 models
    15051 
    15052 > hide #1.7 models
    15053 
    15054 > hide #1.8 models
    15055 
    15056 > hide #1.9 models
    15057 
    15058 > hide #1.10 models
    15059 
    15060 > hide #1.3 models
    15061 
    15062 > hide #1.4 models
    15063 
    15064 > hide #1.5 models
    15065 
    15066 > hide #1.2 models
    15067 
    15068 > hide #1.1 models
    15069 
    15070 > select #1:63-68
    15071 
    15072 1890 atoms, 2030 bonds, 60 residues, 10 models selected 
    15073 
    15074 > tile
    15075 
    15076 1 model tiled 
    15077 
    15078 > select #1.6:63-68
    15079 
    15080 189 atoms, 203 bonds, 6 residues, 1 model selected 
    15081 
    15082 > color sel lime
    15083 
    15084 > select #1.6:85-99
    15085 
    15086 481 atoms, 518 bonds, 15 residues, 1 model selected 
    15087 
    15088 > color sel red
    15089 
    15090 > select up
    15091 
    15092 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15093 
    15094 > select up
    15095 
    15096 107780 atoms, 116240 bonds, 3360 residues, 10 models selected 
    15097 
    15098 > select down
    15099 
    15100 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15101 
    15102 > select down
    15103 
    15104 481 atoms, 518 bonds, 15 residues, 1 model selected 
    15105 
    15106 > select down
    15107 
    15108 481 atoms, 518 bonds, 15 residues, 1 model selected 
    15109 
    15110 > select #1.6:77-79
    15111 
    15112 97 atoms, 104 bonds, 3 residues, 1 model selected 
    15113 
    15114 > color sel magenta
    15115 
    15116 > molmap #1.6 20
    15117 
    15118 Opened Kendall.pdb map 20 as #2, grid size 31,41,35, pixel 6.67, shown at
    15119 level 0.0292, step 1, values float32 
    15120 
    15121 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2773_004_volume_map.mrc
    15122 
    15123 Opened cryosparc_P12_J2773_004_volume_map.mrc as #3, grid size 128,128,128,
    15124 pixel 2.96, shown at level 0.117, step 1, values float32 
    15125 
    15126 > tile
    15127 
    15128 3 models tiled 
    15129 
    15130 > hide #!2 models
    15131 
    15132 > tile
    15133 
    15134 2 models tiled 
    15135 
    15136 > surface dust #3 size 29.6
    15137 
    15138 > volume #3 level 0.15
    15139 
    15140 > volume #3 level 0.2
    15141 
    15142 > volume #3 level 0.25
    15143 
    15144 > volume #3 level 0.3
    15145 
    15146 > volume #3 level 0.35
    15147 
    15148 > volume #3 level 0.4
    15149 
    15150 > tile
    15151 
    15152 2 models tiled 
    15153 
    15154 > transparency #3.1 50
    15155 
    15156 > view matrix models
    15157 > #1.6,0.87646,0.38949,-0.28304,236.83,0.27866,0.069028,0.9579,-210.62,0.39263,-0.91844,-0.048037,14.582
    15158 
    15159 > fitmap #1.6 inMap 3 search 200 res 15
    15160 
    15161 Invalid "inMap" argument: invalid density map specifier 
    15162 
    15163 > fitmap #1.6 inMap #3 search 200 resolution 15
    15164 
    15165 Opened Kendall.pdb map 15 as #2, grid size 35,49,41, pixel 5, shown at level
    15166 0.0384, step 1, values float32 
    15167 Found 60 unique fits from 200 random placements having fraction of points
    15168 inside contour >= 0.100 (199 of 200). 
    15169  
    15170 Correlations and times found: 
    15171 0.5948 (13), 0.579 (12), 0.5596 (5), 0.5595 (16), 0.5591 (11), 0.556 (9),
    15172 0.5531 (20), 0.5459 (2), 0.5446 (5), 0.544 (5), 0.5428 (15), 0.5424 (2),
    15173 0.5423 (4), 0.5402 (1), 0.5386 (1), 0.538 (7), 0.5332 (6), 0.532 (4), 0.5281
    15174 (1), 0.528 (1), 0.5214 (4), 0.5193 (1), 0.517 (2), 0.5119 (1), 0.5045 (1),
    15175 0.5003 (3), 0.4932 (1), 0.4886 (3), 0.4874 (1), 0.482 (1), 0.482 (1), 0.4774
    15176 (2), 0.4769 (5), 0.4743 (1), 0.4726 (2), 0.4717 (3), 0.4662 (1), 0.4654 (1),
    15177 0.4624 (1), 0.4599 (1), 0.4554 (1), 0.4554 (1), 0.4546 (1), 0.451 (1), 0.4497
    15178 (2), 0.4478 (1), 0.4476 (1), 0.4476 (1), 0.4472 (1), 0.4425 (1), 0.4383 (2),
    15179 0.4382 (1), 0.4381 (1), 0.4374 (1), 0.4374 (2), 0.4373 (1), 0.4319 (1), 0.43
    15180 (1), 0.3909 (1), 0.3356 (1) 
    15181  
    15182 Best fit found: 
    15183 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15184 2303 points 
    15185 correlation = 0.5948, correlation about mean = 0.3334, overlap = 285.9 
    15186 steps = 876, shift = 34.5, angle = 80.7 degrees 
    15187 Position of Kendall.pdb map 15 (#2) relative to
    15188 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15189 Matrix rotation and translation 
    15190 -0.87408150 0.14816280 0.46263306 177.93677106 
    15191 0.46471903 0.53241160 0.70751260 209.33605278 
    15192 -0.14148413 0.83341805 -0.53422519 181.54195966 
    15193 Axis 0.18153653 0.87104523 0.45642600 
    15194 Axis point 71.85390074 0.00000000 23.19565781 
    15195 Rotation angle (degrees) 159.70968164 
    15196 Shift along axis 297.50366517 
    15197  
    15198 Found 60 fits. 
    15199 
    15200 > ui tool show "Fit in Map"
    15201 
    15202 > fitmap #1.6 inMap #3
    15203 
    15204 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15205 (#3) using 10778 atoms 
    15206 average map value = 0, steps = 24 
    15207 shifted from previous position = 0 
    15208 rotated from previous position = 0 degrees 
    15209 atoms outside contour = 10778, contour level = 0.4 
    15210  
    15211 Position of Kendall.pdb (#1.6) relative to
    15212 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15213 Matrix rotation and translation 
    15214 -0.87408150 0.14816280 0.46263306 177.93677106 
    15215 0.46471903 0.53241160 0.70751260 209.33605278 
    15216 -0.14148413 0.83341805 -0.53422519 181.54195966 
    15217 Axis 0.18153653 0.87104523 0.45642600 
    15218 Axis point 71.85390074 0.00000000 23.19565781 
    15219 Rotation angle (degrees) 159.70968164 
    15220 Shift along axis 297.50366517 
    15221  
    15222 
    15223 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15224 
    15225 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15226 2303 points 
    15227 correlation = 0.595, correlation about mean = 0.3341, overlap = 285.7 
    15228 steps = 164, shift = 2.76, angle = 19.5 degrees 
    15229  
    15230 Position of Kendall.pdb map 15 (#2) relative to
    15231 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15232 Matrix rotation and translation 
    15233 -0.74337579 -0.38469320 0.54717786 236.93637367 
    15234 0.29723199 0.54285966 0.78546579 147.62822717 
    15235 -0.59920412 0.74653500 -0.28920557 135.26653498 
    15236 Axis -0.02917389 0.85907367 0.51101987 
    15237 Axis point 129.58037976 0.00000000 -30.23508069 
    15238 Rotation angle (degrees) 138.14714868 
    15239 Shift along axis 189.03505541 
    15240  
    15241 Average map value = 0 for 2554 atoms, 10778 outside contour 
    15242 
    15243 > close #1.10
    15244 
    15245 > close #1.9
    15246 
    15247 > close #1.8
    15248 
    15249 > close #1.7
    15250 
    15251 > close #1.1
    15252 
    15253 > close #1.2
    15254 
    15255 > close #1.3
    15256 
    15257 > close #1.4
    15258 
    15259 > close #1.5
    15260 
    15261 > fitmap #1.6 inMap #3 search 200 resolution 15
    15262 
    15263 Found 63 unique fits from 200 random placements having fraction of points
    15264 inside contour >= 0.100 (199 of 200). 
    15265  
    15266 Correlations and times found: 
    15267 0.5948 (11), 0.579 (13), 0.5596 (7), 0.5595 (23), 0.5591 (9), 0.5559 (9),
    15268 0.553 (8), 0.5445 (2), 0.544 (4), 0.5428 (9), 0.5425 (4), 0.5424 (1), 0.5401
    15269 (1), 0.5386 (1), 0.538 (7), 0.5332 (6), 0.5326 (2), 0.5281 (2), 0.5281 (1),
    15270 0.5215 (5), 0.517 (1), 0.5119 (1), 0.5064 (1), 0.5003 (2), 0.4993 (1), 0.4992
    15271 (1), 0.4989 (4), 0.4932 (2), 0.4891 (1), 0.4886 (3), 0.4875 (6), 0.4851 (2),
    15272 0.4848 (3), 0.4821 (2), 0.4774 (2), 0.4769 (2), 0.4763 (1), 0.4743 (2), 0.4725
    15273 (2), 0.4717 (5), 0.4704 (1), 0.4699 (1), 0.4694 (1), 0.4634 (2), 0.4624 (1),
    15274 0.4554 (5), 0.4554 (1), 0.4498 (1), 0.4413 (1), 0.4383 (3), 0.4377 (1), 0.4372
    15275 (1), 0.4364 (1), 0.432 (1), 0.4289 (1), 0.4249 (1), 0.4067 (1), 0.3956 (1),
    15276 0.3778 (1), 0.3758 (1), 0.374 (1), 0.3664 (1), 0.3537 (1) 
    15277  
    15278 Best fit found: 
    15279 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15280 2303 points 
    15281 correlation = 0.5948, correlation about mean = 0.3334, overlap = 285.9 
    15282 steps = 280, shift = 17.7, angle = 92.5 degrees 
    15283 Position of Kendall.pdb map 15 (#2) relative to
    15284 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15285 Matrix rotation and translation 
    15286 -0.87459978 0.14947307 0.46122995 177.90706234 
    15287 0.46440818 0.53154921 0.70836467 209.31072644 
    15288 -0.13928493 0.83373451 -0.53430930 181.62489061 
    15289 Axis 0.18180623 0.87084217 0.45670605 
    15290 Axis point 71.77342620 0.00000000 23.28456824 
    15291 Rotation angle (degrees) 159.83103917 
    15292 Shift along axis 297.57040459 
    15293  
    15294 Found 63 fits. 
    15295 
    15296 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15297 
    15298 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15299 2303 points 
    15300 correlation = 0.5951, correlation about mean = 0.3342, overlap = 285.7 
    15301 steps = 364, shift = 9.77, angle = 77.1 degrees 
    15302  
    15303 Position of Kendall.pdb map 15 (#2) relative to
    15304 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15305 Matrix rotation and translation 
    15306 0.81225459 0.29049049 -0.50582380 208.97203839 
    15307 0.55671805 -0.64488711 0.52362734 421.46322127 
    15308 -0.17409050 -0.70692000 -0.68553383 403.36980388 
    15309 Axis -0.94513009 -0.25478997 0.20447785 
    15310 Axis point 0.00000000 270.43957712 152.87062948 
    15311 Rotation angle (degrees) 139.38344004 
    15312 Shift along axis -222.41017387 
    15313  
    15314 Average map value = 2.893e-05 for 941 atoms, 10778 outside contour 
    15315 
    15316 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15317 
    15318 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15319 2303 points 
    15320 correlation = 0, correlation about mean = 0, overlap = 0 
    15321 steps = 24, shift = 0, angle = 0 degrees 
    15322  
    15323 Position of Kendall.pdb map 15 (#2) relative to
    15324 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15325 Matrix rotation and translation 
    15326 0.81225459 0.29049049 -0.50582380 208.97203839 
    15327 0.55671805 -0.64488711 0.52362734 421.46322127 
    15328 -0.17409050 -0.70692000 -0.68553383 403.36980388 
    15329 Axis -0.94513009 -0.25478997 0.20447785 
    15330 Axis point 0.00000000 270.43957712 152.87062948 
    15331 Rotation angle (degrees) 139.38344004 
    15332 Shift along axis -222.41017387 
    15333  
    15334 Average map value = 2.893e-05 for 941 atoms, 10778 outside contour 
    15335 
    15336 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15337 
    15338 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15339 2303 points 
    15340 correlation = 0, correlation about mean = 0, overlap = 0 
    15341 steps = 24, shift = 0, angle = 0 degrees 
    15342  
    15343 Position of Kendall.pdb map 15 (#2) relative to
    15344 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15345 Matrix rotation and translation 
    15346 0.81225459 0.29049049 -0.50582380 208.97203839 
    15347 0.55671805 -0.64488711 0.52362734 421.46322127 
    15348 -0.17409050 -0.70692000 -0.68553383 403.36980388 
    15349 Axis -0.94513009 -0.25478997 0.20447785 
    15350 Axis point 0.00000000 270.43957712 152.87062948 
    15351 Rotation angle (degrees) 139.38344004 
    15352 Shift along axis -222.41017387 
    15353  
    15354 Average map value = 2.893e-05 for 941 atoms, 10778 outside contour 
    15355 
    15356 > select add #1.6
    15357 
    15358 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15359 
    15360 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15361 
    15362 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15363 2303 points 
    15364 correlation = 0, correlation about mean = 0, overlap = 0 
    15365 steps = 24, shift = 0, angle = 0 degrees 
    15366  
    15367 Position of Kendall.pdb map 15 (#2) relative to
    15368 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15369 Matrix rotation and translation 
    15370 0.63356809 0.67491722 -0.37825676 73.97662416 
    15371 0.69537550 -0.28241110 0.66083044 327.03694801 
    15372 0.33918194 -0.68171161 -0.64824756 450.68616277 
    15373 Axis -0.88188667 -0.47126988 0.01343860 
    15374 Axis point 0.00000000 262.48474417 166.60955065 
    15375 Rotation angle (degrees) 130.43201254 
    15376 Shift along axis -213.30507170 
    15377  
    15378 Average map value = -0.0001145 for 4965 atoms, 10778 outside contour 
    15379 
    15380 > fitmap #1.6 inMap #3 resolution 15 metric correlation
    15381 
    15382 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15383 2303 points 
    15384 correlation = 0, correlation about mean = 0, overlap = 0 
    15385 steps = 24, shift = 0, angle = 0 degrees 
    15386  
    15387 Position of Kendall.pdb map 15 (#2) relative to
    15388 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15389 Matrix rotation and translation 
    15390 0.63356809 0.67491722 -0.37825676 73.97662416 
    15391 0.69537550 -0.28241110 0.66083044 327.03694801 
    15392 0.33918194 -0.68171161 -0.64824756 450.68616277 
    15393 Axis -0.88188667 -0.47126988 0.01343860 
    15394 Axis point 0.00000000 262.48474417 166.60955065 
    15395 Rotation angle (degrees) 130.43201254 
    15396 Shift along axis -213.30507170 
    15397  
    15398 Average map value = -0.0001145 for 4965 atoms, 10778 outside contour 
    15399 
    15400 > fitmap #1.6 inMap #3
    15401 
    15402 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15403 (#3) using 10778 atoms 
    15404 average map value = 0.000569, steps = 216 
    15405 shifted from previous position = 25.3 
    15406 rotated from previous position = 30.9 degrees 
    15407 atoms outside contour = 10778, contour level = 0.4 
    15408  
    15409 Position of Kendall.pdb (#1.6) relative to
    15410 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15411 Matrix rotation and translation 
    15412 -0.68862778 -0.15837686 0.70760762 188.47826197 
    15413 0.64061688 0.32429713 0.69601820 224.20952583 
    15414 -0.33970826 0.93260289 -0.12186112 156.16022669 
    15415 Axis 0.17677079 0.78253099 0.59699024 
    15416 Axis point 62.99666340 0.00000000 -40.58258028 
    15417 Rotation angle (degrees) 137.99581087 
    15418 Shift along axis 301.99448289 
    15419  
    15420 
    15421 > fitmap #1.6 inMap #3
    15422 
    15423 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15424 (#3) using 10778 atoms 
    15425 average map value = 0.0005692, steps = 76 
    15426 shifted from previous position = 0.111 
    15427 rotated from previous position = 0.129 degrees 
    15428 atoms outside contour = 10778, contour level = 0.4 
    15429  
    15430 Position of Kendall.pdb (#1.6) relative to
    15431 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15432 Matrix rotation and translation 
    15433 -0.68784005 -0.15955983 0.70810784 188.57230042 
    15434 0.64151253 0.32280132 0.69588860 224.31759397 
    15435 -0.33961398 0.93292014 -0.11967604 156.12854890 
    15436 Axis 0.17688813 0.78187719 0.59781155 
    15437 Axis point 62.89732235 0.00000000 -40.92205964 
    15438 Rotation angle (degrees) 137.93261908 
    15439 Shift along axis 302.08046169 
    15440  
    15441 
    15442 > hide #!3 models
    15443 
    15444 > show #!3 models
    15445 
    15446 > tile
    15447 
    15448 2 models tiled 
    15449 
    15450 > view matrix models
    15451 > #1.6,-0.92786,-0.1317,0.3489,375.79,0.33352,0.12554,0.93435,-183.38,-0.16685,0.98331,-0.072556,-23.801
    15452 
    15453 > view matrix models
    15454 > #1.6,0.08694,0.83393,-0.54498,385.57,0.47097,0.44765,0.76013,-185.2,0.87785,-0.32276,-0.35384,24.021
    15455 
    15456 > view matrix models
    15457 > #1.6,0.77479,-0.3495,-0.52684,422.75,0.6186,0.24699,0.74588,-178.11,-0.13056,-0.9038,0.40756,8.0181
    15458 
    15459 > ui mousemode right "translate selected models"
    15460 
    15461 > view matrix models
    15462 > #1.6,0.77479,-0.3495,-0.52684,431.22,0.6186,0.24699,0.74588,-186.5,-0.13056,-0.9038,0.40756,195.62
    15463 
    15464 > fitmap #1.6 inMap #3
    15465 
    15466 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15467 (#3) using 10778 atoms 
    15468 average map value = 0.6452, steps = 80 
    15469 shifted from previous position = 15.1 
    15470 rotated from previous position = 14.7 degrees 
    15471 atoms outside contour = 6305, contour level = 0.4 
    15472  
    15473 Position of Kendall.pdb (#1.6) relative to
    15474 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15475 Matrix rotation and translation 
    15476 0.18666217 -0.90141055 0.39066132 264.95750741 
    15477 0.29114401 0.43054350 0.85432280 291.33537296 
    15478 -0.93829223 -0.04573105 0.34280650 280.79213176 
    15479 Axis -0.45011691 0.66460964 0.59639651 
    15480 Axis point 331.84332001 0.00000000 -265.97646267 
    15481 Rotation angle (degrees) 91.14564310 
    15482 Shift along axis 241.82588876 
    15483  
    15484 
    15485 > select add #1
    15486 
    15487 10778 atoms, 11624 bonds, 336 residues, 2 models selected 
    15488 
    15489 > select subtract #1
    15490 
    15491 Nothing selected 
    15492 
    15493 > hide #!1 models
    15494 
    15495 > select add #1.6
    15496 
    15497 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    15498 
    15499 > select add #1
    15500 
    15501 10778 atoms, 11624 bonds, 336 residues, 2 models selected 
    15502 
    15503 > select subtract #1
    15504 
    15505 Nothing selected 
    15506 
    15507 > show #!1 models
    15508 
    15509 > tile
    15510 
    15511 2 models tiled 
    15512 
    15513 > tile
    15514 
    15515 2 models tiled 
    15516 
    15517 > fitmap #1.6 inMap #3
    15518 
    15519 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15520 (#3) using 10778 atoms 
    15521 average map value = 0.002113, steps = 188 
    15522 shifted from previous position = 9.97 
    15523 rotated from previous position = 13.5 degrees 
    15524 atoms outside contour = 10778, contour level = 0.4 
    15525  
    15526 Position of Kendall.pdb (#1.6) relative to
    15527 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15528 Matrix rotation and translation 
    15529 -0.86549418 0.23184666 0.44403487 93.88621740 
    15530 0.42072349 -0.14464846 0.89558280 168.52700508 
    15531 0.27186685 0.96193756 0.02764910 339.31132873 
    15532 Axis 0.25130191 0.65204290 0.71532329 
    15533 Axis point -9.10122261 -70.41400052 0.00000000 
    15534 Rotation angle (degrees) 172.41354794 
    15535 Shift along axis 376.19791819 
    15536  
    15537 
    15538 > fitmap #1.6 inMap #3
    15539 
    15540 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15541 (#3) using 10778 atoms 
    15542 average map value = 0.002113, steps = 80 
    15543 shifted from previous position = 0.0948 
    15544 rotated from previous position = 0.208 degrees 
    15545 atoms outside contour = 10778, contour level = 0.4 
    15546  
    15547 Position of Kendall.pdb (#1.6) relative to
    15548 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15549 Matrix rotation and translation 
    15550 -0.86725625 0.23069090 0.44118966 93.80572638 
    15551 0.41823052 -0.14317106 0.89698677 168.37863855 
    15552 0.27009228 0.96243633 0.02768405 339.23533441 
    15553 Axis 0.24965283 0.65263917 0.71535696 
    15554 Axis point -8.74933095 -70.56013357 0.00000000 
    15555 Rotation angle (degrees) 172.46792768 
    15556 Shift along axis 375.98371685 
    15557  
    15558 
    15559 > fitmap #1.6 inMap #3
    15560 
    15561 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15562 (#3) using 10778 atoms 
    15563 average map value = 0.002112, steps = 92 
    15564 shifted from previous position = 0.0817 
    15565 rotated from previous position = 0.0656 degrees 
    15566 atoms outside contour = 10778, contour level = 0.4 
    15567  
    15568 Position of Kendall.pdb (#1.6) relative to
    15569 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15570 Matrix rotation and translation 
    15571 -0.86770982 0.22972128 0.44080359 93.81100123 
    15572 0.41785326 -0.14319658 0.89715850 168.39489369 
    15573 0.26921798 0.96266442 0.02826333 339.14031969 
    15574 Axis 0.24914890 0.65261829 0.71555167 
    15575 Axis point -8.58758531 -70.45217185 0.00000000 
    15576 Rotation angle (degrees) 172.44606655 
    15577 Shift along axis 375.94291798 
    15578  
    15579 
    15580 > fitmap #1.6 inMap #3
    15581 
    15582 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15583 (#3) using 10778 atoms 
    15584 average map value = 0.002112, steps = 96 
    15585 shifted from previous position = 0.0827 
    15586 rotated from previous position = 0.181 degrees 
    15587 atoms outside contour = 10778, contour level = 0.4 
    15588  
    15589 Position of Kendall.pdb (#1.6) relative to
    15590 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15591 Matrix rotation and translation 
    15592 -0.86615525 0.23134440 0.44300662 93.85132214 
    15593 0.41983434 -0.14408220 0.89609119 168.47715310 
    15594 0.27113505 0.96214345 0.02767127 339.26037623 
    15595 Axis 0.25067460 0.65226896 0.71533730 
    15596 Axis point -8.96387895 -70.45583233 0.00000000 
    15597 Rotation angle (degrees) 172.42932802 
    15598 Shift along axis 376.10416036 
    15599  
    15600 
    15601 > select add #1
    15602 
    15603 10778 atoms, 11624 bonds, 336 residues, 2 models selected 
    15604 
    15605 > select up
    15606 
    15607 10778 atoms, 11624 bonds, 336 residues, 6 models selected 
    15608 
    15609 > select up
    15610 
    15611 10778 atoms, 11624 bonds, 336 residues, 6 models selected 
    15612 
    15613 > fitmap #1 inMap #3 search 200 resolution 15
    15614 
    15615 Found 68 unique fits from 200 random placements having fraction of points
    15616 inside contour >= 0.100 (198 of 200). 
    15617  
    15618 Correlations and times found: 
    15619 0.5948 (11), 0.579 (13), 0.5596 (5), 0.5595 (23), 0.5591 (5), 0.556 (5),
    15620 0.5531 (10), 0.5445 (5), 0.544 (4), 0.5428 (15), 0.5423 (3), 0.5422 (3),
    15621 0.5402 (2), 0.5392 (1), 0.538 (3), 0.5332 (4), 0.5281 (2), 0.5215 (6), 0.5201
    15622 (1), 0.5192 (1), 0.5188 (1), 0.5171 (1), 0.5119 (2), 0.5042 (1), 0.5038 (2),
    15623 0.5003 (2), 0.4992 (1), 0.4953 (1), 0.4895 (1), 0.4886 (2), 0.4877 (1), 0.4875
    15624 (8), 0.4819 (1), 0.4773 (4), 0.477 (4), 0.4742 (4), 0.4718 (4), 0.4712 (1),
    15625 0.4654 (1), 0.4634 (1), 0.4624 (1), 0.4599 (1), 0.4554 (1), 0.4551 (1), 0.4548
    15626 (1), 0.4497 (3), 0.4476 (1), 0.4472 (1), 0.4452 (2), 0.4425 (1), 0.4383 (2),
    15627 0.4377 (1), 0.4377 (1), 0.4363 (1), 0.4346 (1), 0.4333 (1), 0.4306 (1), 0.43
    15628 (1), 0.43 (1), 0.4289 (1), 0.4273 (1), 0.4269 (1), 0.4249 (1), 0.4233 (1),
    15629 0.4068 (1), 0.3996 (2), 0.3664 (1), 0.3441 (1) 
    15630  
    15631 Best fit found: 
    15632 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15633 2303 points 
    15634 correlation = 0.5948, correlation about mean = 0.3334, overlap = 285.9 
    15635 steps = 200, shift = 40.1, angle = 37.3 degrees 
    15636 Position of Kendall.pdb map 15 (#2) relative to
    15637 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15638 Matrix rotation and translation 
    15639 -0.87389102 0.14678494 0.46343143 177.90313902 
    15640 0.46449608 0.53331357 0.70697950 209.30667955 
    15641 -0.14338031 0.83308507 -0.53423898 181.48585683 
    15642 Axis 0.18106520 0.87127387 0.45617676 
    15643 Axis point 71.93066120 0.00000000 23.15242392 
    15644 Rotation angle (degrees) 159.62075578 
    15645 Shift along axis 297.36513814 
    15646  
    15647 Found 68 fits. 
    15648 
    15649 > fitmap sel inMap #3 resolution 15 metric correlation
    15650 
    15651 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15652 2303 points 
    15653 correlation = 0.5951, correlation about mean = 0.3342, overlap = 285.7 
    15654 steps = 96, shift = 0.825, angle = 2.3 degrees 
    15655  
    15656 Position of Kendall.pdb map 15 (#2) relative to
    15657 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15658 Matrix rotation and translation 
    15659 -0.87069065 0.11921757 0.47716348 182.28613045 
    15660 0.45695563 0.55490824 0.69517507 205.48232679 
    15661 -0.18190485 0.82332492 -0.53763057 176.33650413 
    15662 Axis 0.17050909 0.87691977 0.44937553 
    15663 Axis point 76.25779356 0.00000000 20.75585514 
    15664 Rotation angle (degrees) 157.92709992 
    15665 Shift along axis 290.51426718 
    15666  
    15667 Average map value = -0.003925 for 10778 atoms, 10778 outside contour 
    15668 
    15669 > fitmap sel inMap #3 resolution 15 metric correlation
    15670 
    15671 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15672 2303 points 
    15673 correlation = 0.5951, correlation about mean = 0.3342, overlap = 285.7 
    15674 steps = 72, shift = 5.85, angle = 4.46 degrees 
    15675  
    15676 Position of Kendall.pdb map 15 (#2) relative to
    15677 cryosparc_P12_J2773_004_volume_map.mrc (#3) coordinates: 
    15678 Matrix rotation and translation 
    15679 -0.85000365 0.07274214 0.52173020 188.17274663 
    15680 0.46001284 0.58508743 0.66787788 201.23631950 
    15681 -0.25667491 0.80770118 -0.53078878 171.60523100 
    15682 Axis 0.15878315 0.88395580 0.43978409 
    15683 Axis point 82.18601291 0.00000000 16.95155280 
    15684 Rotation angle (degrees) 153.87720648 
    15685 Shift along axis 283.23192552 
    15686  
    15687 Average map value = -0.003218 for 10778 atoms, 10778 outside contour 
    15688 
    15689 > close #3
    15690 
    15691 > close #2
    15692 
    15693 > hide #!1 models
    15694 
    15695 > show #!1 models
    15696 
    15697 > select subtract #1
    15698 
    15699 Nothing selected 
    15700 
    15701 > tile
    15702 
    15703 1 model tiled 
    15704 
    15705 > open /Users/francescappadoo/Downloads/cryosparc_P12_J2773_004_volume_map.mrc
    15706 
    15707 Opened cryosparc_P12_J2773_004_volume_map.mrc as #2, grid size 128,128,128,
    15708 pixel 2.96, shown at level 0.117, step 1, values float32 
    15709 
    15710 > tile
    15711 
    15712 2 models tiled 
    15713 
    15714 > surface dust #2 size 29.6
    15715 
    15716 > volume #2 level 0.4
    15717 
    15718 > select add #2
    15719 
    15720 2 models selected 
    15721 
    15722 > view matrix models #2,1,0,0,681.03,0,1,0,-449.37,0,0,1,165.67
    15723 
    15724 > ui mousemode right "rotate selected models"
    15725 
    15726 > view matrix models
    15727 > #2,0.026468,-0.12603,-0.99167,1086,0.075081,0.98947,-0.12375,-437.37,0.99683,-0.07118,0.035652,178.49
    15728 
    15729 > transparency sel 50
    15730 
    15731 > select up
    15732 
    15733 3 models selected 
    15734 
    15735 > select down
    15736 
    15737 2 models selected 
    15738 Must specify one map, got 0 
    15739 
    15740 > fitmap #1 inMap #2 search 200 resolution 15
    15741 
    15742 Opened Kendall.pdb map 15 as #3, grid size 35,49,41, pixel 5, shown at level
    15743 0.0384, step 1, values float32 
    15744 Found 65 unique fits from 200 random placements having fraction of points
    15745 inside contour >= 0.100 (199 of 200). 
    15746  
    15747 Correlations and times found: 
    15748 0.5948 (11), 0.579 (14), 0.5596 (5), 0.5595 (22), 0.5591 (6), 0.5559 (5),
    15749 0.5531 (11), 0.5446 (3), 0.544 (2), 0.5428 (11), 0.5425 (3), 0.5423 (1),
    15750 0.5387 (1), 0.538 (5), 0.5332 (6), 0.528 (1), 0.5259 (1), 0.5215 (9), 0.5201
    15751 (1), 0.5191 (1), 0.5187 (2), 0.5119 (1), 0.5003 (2), 0.4992 (1), 0.4989 (2),
    15752 0.4886 (1), 0.4877 (1), 0.4874 (5), 0.4848 (2), 0.4848 (1), 0.4823 (1), 0.4773
    15753 (3), 0.4769 (4), 0.4743 (1), 0.4725 (2), 0.4717 (2), 0.4712 (2), 0.4699 (1),
    15754 0.4671 (1), 0.4663 (1), 0.4654 (1), 0.4636 (2), 0.4634 (7), 0.4624 (1), 0.457
    15755 (2), 0.4554 (3), 0.4551 (1), 0.4548 (1), 0.4497 (4), 0.4472 (2), 0.4425 (2),
    15756 0.4413 (1), 0.4383 (2), 0.4379 (1), 0.4378 (1), 0.4377 (3), 0.4374 (1), 0.4357
    15757 (1), 0.4289 (1), 0.4249 (2), 0.4157 (1), 0.3956 (1), 0.3664 (1), 0.2802 (1),
    15758 0.2795 (1) 
    15759  
    15760 Best fit found: 
    15761 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15762 2303 points 
    15763 correlation = 0.5948, correlation about mean = 0.3334, overlap = 285.9 
    15764 steps = 932, shift = 41.3, angle = 73.9 degrees 
    15765 Position of Kendall.pdb map 15 (#3) relative to
    15766 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15767 Matrix rotation and translation 
    15768 -0.87426424 0.14844872 0.46219597 177.89462799 
    15769 0.46459970 0.53190260 0.70797372 209.31817280 
    15770 -0.14074548 0.83369209 -0.53399264 181.59112004 
    15771 Axis 0.18159226 0.87091088 0.45666015 
    15772 Axis point 71.81317259 0.00000000 23.21714376 
    15773 Rotation angle (degrees) 159.74764365 
    15774 Shift along axis 297.52718868 
    15775  
    15776 Found 65 fits. 
    15777 
    15778 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    15779 
    15780 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15781 2303 points 
    15782 correlation = 0.5951, correlation about mean = 0.3342, overlap = 285.7 
    15783 steps = 84, shift = 0.828, angle = 2.14 degrees 
    15784  
    15785 Position of Kendall.pdb map 15 (#3) relative to
    15786 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15787 Matrix rotation and translation 
    15788 -0.87774142 0.17996620 0.44405209 180.36951193 
    15789 0.46580292 0.53761481 0.70284991 209.40356146 
    15790 -0.11223978 0.82376112 -0.55571555 181.07055391 
    15791 Axis 0.18981028 0.87328480 0.44871564 
    15792 Axis point 71.84585082 0.00000000 25.15268824 
    15793 Rotation angle (degrees) 161.42743799 
    15794 Shift along axis 298.35412342 
    15795  
    15796 Average map value = -0.0134 for 10778 atoms, 10778 outside contour 
    15797 
    15798 > fitmap #1.6 inMap #2 search 200 resolution 15
    15799 
    15800 Found 70 unique fits from 200 random placements having fraction of points
    15801 inside contour >= 0.100 (199 of 200). 
    15802  
    15803 Correlations and times found: 
    15804 0.5948 (14), 0.579 (11), 0.5596 (4), 0.5595 (23), 0.5591 (7), 0.5559 (5),
    15805 0.5531 (12), 0.5459 (1), 0.5445 (2), 0.544 (2), 0.5428 (12), 0.5423 (2), 0.542
    15806 (3), 0.5402 (1), 0.538 (6), 0.5332 (5), 0.5326 (1), 0.5281 (1), 0.5214 (6),
    15807 0.5193 (1), 0.5166 (1), 0.5119 (1), 0.5036 (1), 0.5035 (1), 0.5003 (2), 0.4992
    15808 (2), 0.4989 (2), 0.4928 (1), 0.4886 (1), 0.4876 (1), 0.4875 (6), 0.4848 (2),
    15809 0.4848 (1), 0.4773 (2), 0.4769 (5), 0.4743 (1), 0.4726 (1), 0.4717 (2), 0.4713
    15810 (1), 0.47 (2), 0.4672 (1), 0.4662 (1), 0.4654 (1), 0.4636 (1), 0.4634 (5),
    15811 0.4624 (1), 0.4599 (1), 0.457 (1), 0.4554 (1), 0.4554 (2), 0.4552 (1), 0.4548
    15812 (2), 0.4511 (1), 0.4497 (3), 0.4472 (2), 0.4413 (1), 0.4405 (1), 0.4383 (3),
    15813 0.4378 (1), 0.4377 (2), 0.4356 (1), 0.4288 (1), 0.4233 (2), 0.4066 (1), 0.3956
    15814 (2), 0.3356 (1), 0.3249 (1), 0.3123 (1), 0.2802 (1), 0.2796 (1) 
    15815  
    15816 Best fit found: 
    15817 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15818 2303 points 
    15819 correlation = 0.5948, correlation about mean = 0.3334, overlap = 285.9 
    15820 steps = 260, shift = 52.9, angle = 77.1 degrees 
    15821 Position of Kendall.pdb map 15 (#3) relative to
    15822 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15823 Matrix rotation and translation 
    15824 -0.87411572 0.14826364 0.46253623 177.94078347 
    15825 0.46469472 0.53240157 0.70753617 209.33925839 
    15826 -0.14135315 0.83340644 -0.53427792 181.54043474 
    15827 Axis 0.18155438 0.87104574 0.45641793 
    15828 Axis point 71.85141827 0.00000000 23.20041052 
    15829 Rotation angle (degrees) 159.71768355 
    15830 Shift along axis 297.50830682 
    15831  
    15832 Found 70 fits. 
    15833 
    15834 > fitmap #1.6 inMap #2
    15835 
    15836 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15837 (#2) using 10778 atoms 
    15838 average map value = 0.4906, steps = 636 
    15839 shifted from previous position = 62.8 
    15840 rotated from previous position = 35.4 degrees 
    15841 atoms outside contour = 7615, contour level = 0.4 
    15842  
    15843 Position of Kendall.pdb (#1.6) relative to
    15844 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15845 Matrix rotation and translation 
    15846 -0.86179178 0.42763774 0.27283893 147.70717188 
    15847 -0.31224525 -0.87109806 0.37906617 215.99244846 
    15848 0.39977236 0.24148344 0.88423280 146.78081492 
    15849 Axis -0.18027185 -0.16631829 -0.96945360 
    15850 Axis point 78.81262261 84.07554335 0.00000000 
    15851 Rotation angle (degrees) 157.56730465 
    15852 Shift along axis -204.84813020 
    15853  
    15854 
    15855 > fitmap #1.6 inMap #2
    15856 
    15857 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15858 (#2) using 10778 atoms 
    15859 average map value = 0.4906, steps = 48 
    15860 shifted from previous position = 0.37 
    15861 rotated from previous position = 1.3 degrees 
    15862 atoms outside contour = 7629, contour level = 0.4 
    15863  
    15864 Position of Kendall.pdb (#1.6) relative to
    15865 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15866 Matrix rotation and translation 
    15867 -0.85448778 0.42816103 0.29415804 148.40523984 
    15868 -0.30658405 -0.87278755 0.37980020 215.98303204 
    15869 0.41935303 0.23435046 0.87705344 147.17782014 
    15870 Axis -0.19153388 -0.16486163 -0.96754091 
    15871 Axis point 78.18034035 84.35627562 0.00000000 
    15872 Rotation angle (degrees) 157.68507696 
    15873 Shift along axis -206.43250899 
    15874  
    15875 
    15876 > fitmap #1.6 inMap #2
    15877 
    15878 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15879 (#2) using 10778 atoms 
    15880 average map value = 0.4906, steps = 40 
    15881 shifted from previous position = 0.0223 
    15882 rotated from previous position = 0.146 degrees 
    15883 atoms outside contour = 7620, contour level = 0.4 
    15884  
    15885 Position of Kendall.pdb (#1.6) relative to
    15886 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15887 Matrix rotation and translation 
    15888 -0.85395725 0.42754928 0.29657851 148.46442122 
    15889 -0.30541732 -0.87330410 0.37955275 216.01028530 
    15890 0.42128064 0.23354160 0.87634513 147.21397313 
    15891 Axis -0.19270301 -0.16457973 -0.96735674 
    15892 Axis point 78.07984434 84.43172301 0.00000000 
    15893 Rotation angle (degrees) 157.73752242 
    15894 Shift along axis -206.56888483 
    15895  
    15896 
    15897 > fitmap #1.6 inMap #2
    15898 
    15899 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15900 (#2) using 10778 atoms 
    15901 average map value = -0.004741, steps = 76 
    15902 shifted from previous position = 9.78 
    15903 rotated from previous position = 8.88 degrees 
    15904 atoms outside contour = 10778, contour level = 0.4 
    15905  
    15906 Position of Kendall.pdb (#1.6) relative to
    15907 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15908 Matrix rotation and translation 
    15909 -0.79789300 0.11640909 0.59145233 189.79346595 
    15910 0.55223764 0.53451336 0.63978836 207.03384525 
    15911 -0.24166201 0.83710470 -0.49076985 176.65496604 
    15912 Axis 0.20538639 0.86718793 0.45365353 
    15913 Axis point 76.45382627 0.00000000 15.22135585 
    15914 Rotation angle (degrees) 151.29147759 
    15915 Shift along axis 298.65839562 
    15916  
    15917 
    15918 > fitmap #1.6 inMap #2
    15919 
    15920 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    15921 (#2) using 10778 atoms 
    15922 average map value = -0.005659, steps = 180 
    15923 shifted from previous position = 7.96 
    15924 rotated from previous position = 21.3 degrees 
    15925 atoms outside contour = 10778, contour level = 0.4 
    15926  
    15927 Position of Kendall.pdb (#1.6) relative to
    15928 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15929 Matrix rotation and translation 
    15930 -0.91510608 0.07793345 0.39561019 185.31816762 
    15931 0.39901037 0.31632323 0.86065694 200.56055427 
    15932 -0.05806681 0.94544479 -0.32056560 175.17128763 
    15933 Axis 0.15080644 0.80692470 0.57107788 
    15934 Axis point 74.77640111 0.00000000 4.02778075 
    15935 Rotation angle (degrees) 163.67324881 
    15936 Shift along axis 289.82088621 
    15937  
    15938 
    15939 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    15940 
    15941 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15942 2303 points 
    15943 correlation = 0.5713, correlation about mean = 0.4103, overlap = 248.4 
    15944 steps = 96, shift = 8.33, angle = 14.2 degrees 
    15945  
    15946 Position of Kendall.pdb map 15 (#3) relative to
    15947 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15948 Matrix rotation and translation 
    15949 0.55621596 0.22526295 0.79992536 205.64912164 
    15950 0.82631778 -0.25235758 -0.50350237 203.84925214 
    15951 0.08844674 0.94104846 -0.32650395 176.83542626 
    15952 Axis 0.84045253 0.41394459 0.34969904 
    15953 Axis point 0.00000000 29.20388708 69.91520083 
    15954 Rotation angle (degrees) 120.75198081 
    15955 Shift along axis 319.05979953 
    15956  
    15957 Average map value = -0.01418 for 10778 atoms, 10765 outside contour 
    15958 
    15959 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    15960 
    15961 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15962 2303 points 
    15963 correlation = 0.56, correlation about mean = 0.2603, overlap = 267.8 
    15964 steps = 52, shift = 1.23, angle = 1.29 degrees 
    15965  
    15966 Position of Kendall.pdb map 15 (#3) relative to
    15967 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15968 Matrix rotation and translation 
    15969 -0.84115312 0.10647669 0.53021156 179.60092264 
    15970 -0.50028332 -0.52553310 -0.68813633 177.40566033 
    15971 0.20537321 -0.84408382 0.49532231 216.87775327 
    15972 Axis -0.22098608 0.46031361 -0.85981192 
    15973 Axis point 87.78613591 131.10406675 0.00000000 
    15974 Rotation angle (degrees) 159.33859715 
    15975 Shift along axis -144.50114055 
    15976  
    15977 Average map value = -0.02281 for 10778 atoms, 10778 outside contour 
    15978 
    15979 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    15980 
    15981 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    15982 2303 points 
    15983 correlation = 0.5601, correlation about mean = 0.3562, overlap = 263.6 
    15984 steps = 64, shift = 0.864, angle = 2.11 degrees 
    15985  
    15986 Position of Kendall.pdb map 15 (#3) relative to
    15987 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    15988 Matrix rotation and translation 
    15989 0.77797566 -0.09886450 -0.62046744 198.23592066 
    15990 0.46345954 -0.57647455 0.67296538 199.45234213 
    15991 -0.42421599 -0.81111206 -0.40266348 159.17547237 
    15992 Axis -0.92805447 -0.12272408 0.35164428 
    15993 Axis point 0.00000000 143.88943483 68.50045743 
    15994 Rotation angle (degrees) 126.91153396 
    15995 Shift along axis -152.47819249 
    15996  
    15997 Average map value = -0.01475 for 10778 atoms, 10751 outside contour 
    15998 
    15999 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    16000 
    16001 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    16002 2303 points 
    16003 correlation = 0.5611, correlation about mean = 0.3141, overlap = 258.2 
    16004 steps = 96, shift = 5.61, angle = 14.6 degrees 
    16005  
    16006 Position of Kendall.pdb map 15 (#3) relative to
    16007 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16008 Matrix rotation and translation 
    16009 0.71274708 -0.08168613 -0.69664850 185.08517784 
    16010 -0.70141290 -0.07816709 -0.70845601 160.37195084 
    16011 0.00341611 0.99358801 -0.11300904 175.37476945 
    16012 Axis 0.87646876 -0.36049876 -0.31912874 
    16013 Axis point 0.00000000 32.95009561 200.87196003 
    16014 Rotation angle (degrees) 103.84018569 
    16015 Shift along axis 48.44035874 
    16016  
    16017 Average map value = -0.0151 for 10778 atoms, 10778 outside contour 
    16018 
    16019 > fitmap #1.6 inMap #2 resolution 15 metric correlation
    16020 
    16021 Fit map Kendall.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc using
    16022 2303 points 
    16023 correlation = 0.5541, correlation about mean = 0.2889, overlap = 263.5 
    16024 steps = 84, shift = 1.48, angle = 1.6 degrees 
    16025  
    16026 Position of Kendall.pdb map 15 (#3) relative to
    16027 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16028 Matrix rotation and translation 
    16029 0.92947599 -0.08962228 -0.35783013 203.59839064 
    16030 -0.33942590 0.17205505 -0.92476332 172.35373880 
    16031 0.14444591 0.98100190 0.12950092 186.64661455 
    16032 Axis 0.95930457 -0.25283056 -0.12574358 
    16033 Axis point 0.00000000 -5.68536821 226.53442893 
    16034 Rotation angle (degrees) 83.36661312 
    16035 Shift along axis 128.26695935 
    16036  
    16037 Average map value = -0.0163 for 10778 atoms, 10778 outside contour 
    16038 
    16039 > ui mousemode right "translate selected models"
    16040 
    16041 > view matrix models
    16042 > #2,0.026468,-0.12603,-0.99167,1043.1,0.075081,0.98947,-0.12375,-496.13,0.99683,-0.07118,0.035652,178.49
    16043 
    16044 > fitmap #1.6 inMap #2
    16045 
    16046 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16047 (#2) using 10778 atoms 
    16048 average map value = 0.6452, steps = 172 
    16049 shifted from previous position = 39.9 
    16050 rotated from previous position = 20.9 degrees 
    16051 atoms outside contour = 6308, contour level = 0.4 
    16052  
    16053 Position of Kendall.pdb (#1.6) relative to
    16054 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16055 Matrix rotation and translation 
    16056 0.89787581 -0.30655422 -0.31598037 173.22481185 
    16057 -0.28021104 0.15564412 -0.94723634 227.68413771 
    16058 0.33955986 0.93904164 0.05384922 133.46236825 
    16059 Axis 0.94450105 -0.32824347 0.01319061 
    16060 Axis point 0.00000000 70.05764427 209.32591948 
    16061 Rotation angle (degrees) 86.92262100 
    16062 Shift along axis 90.63563488 
    16063  
    16064 
    16065 > view matrix models
    16066 > #2,-0.15586,-0.2096,-0.96529,1073.4,0.19242,0.95206,-0.2378,-486.49,0.96886,-0.2228,-0.10805,240.64
    16067 
    16068 > fitmap #1.6 inMap #2
    16069 
    16070 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16071 (#2) using 10778 atoms 
    16072 average map value = 0.6452, steps = 120 
    16073 shifted from previous position = 13 
    16074 rotated from previous position = 0.126 degrees 
    16075 atoms outside contour = 6308, contour level = 0.4 
    16076  
    16077 Position of Kendall.pdb (#1.6) relative to
    16078 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16079 Matrix rotation and translation 
    16080 0.89366109 -0.12326910 -0.43147963 167.05462046 
    16081 -0.38622883 0.27825215 -0.87943336 225.71807731 
    16082 0.22846715 0.95256510 0.20105306 130.32840665 
    16083 Axis 0.93235447 -0.33586509 -0.13382745 
    16084 Axis point 0.00000000 53.12473133 236.93392138 
    16085 Rotation angle (degrees) 79.25238427 
    16086 Shift along axis 62.50178162 
    16087  
    16088 
    16089 > fitmap #1.6 inMap #2
    16090 
    16091 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16092 (#2) using 10778 atoms 
    16093 average map value = 0.6452, steps = 56 
    16094 shifted from previous position = 3.9 
    16095 rotated from previous position = 0.0675 degrees 
    16096 atoms outside contour = 6305, contour level = 0.4 
    16097  
    16098 Position of Kendall.pdb (#1.6) relative to
    16099 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16100 Matrix rotation and translation 
    16101 0.91729819 -0.33690508 -0.21227111 167.44899919 
    16102 -0.08944131 0.34513222 -0.93428260 212.85233521 
    16103 0.38802623 0.87600143 0.28645596 123.40099075 
    16104 Axis 0.94128424 -0.31213358 0.12867249 
    16105 Axis point 0.00000000 57.01286097 223.62886597 
    16106 Rotation angle (degrees) 74.07116491 
    16107 Shift along axis 107.05705606 
    16108  
    16109 
    16110 > fitmap #1.6 inMap #2
    16111 
    16112 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16113 (#2) using 10778 atoms 
    16114 average map value = 0.6452, steps = 28 
    16115 shifted from previous position = 0.083 
    16116 rotated from previous position = 0.0484 degrees 
    16117 atoms outside contour = 6309, contour level = 0.4 
    16118  
    16119 Position of Kendall.pdb (#1.6) relative to
    16120 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16121 Matrix rotation and translation 
    16122 0.91758739 -0.33615601 -0.21220873 167.53370898 
    16123 -0.08970054 0.34496636 -0.93431901 212.85313039 
    16124 0.38728189 0.87635446 0.28638343 123.38918306 
    16125 Axis 0.94149383 -0.31171646 0.12814917 
    16126 Axis point 0.00000000 56.98033059 223.63169988 
    16127 Rotation angle (degrees) 74.06965143 
    16128 Shift along axis 107.19435043 
    16129  
    16130 
    16131 > fitmap #1.6 inMap #2
    16132 
    16133 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16134 (#2) using 10778 atoms 
    16135 average map value = 0.6452, steps = 104 
    16136 shifted from previous position = 25.1 
    16137 rotated from previous position = 0.0246 degrees 
    16138 atoms outside contour = 6310, contour level = 0.4 
    16139  
    16140 Position of Kendall.pdb (#1.6) relative to
    16141 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16142 Matrix rotation and translation 
    16143 -0.96481487 0.25121300 0.07761658 250.19852719 
    16144 -0.15829201 -0.31925497 -0.93435534 240.22934986 
    16145 -0.20994280 -0.91376587 0.34778698 238.03972372 
    16146 Axis 0.04111250 0.57419083 -0.81768860 
    16147 Axis point 151.84630984 184.07851199 0.00000000 
    16148 Rotation angle (degrees) 165.49857927 
    16149 Shift along axis -46.41859204 
    16150  
    16151 
    16152 > fitmap #1.6 inMap #2
    16153 
    16154 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16155 (#2) using 10778 atoms 
    16156 average map value = 0.6452, steps = 28 
    16157 shifted from previous position = 0.0496 
    16158 rotated from previous position = 0.0271 degrees 
    16159 atoms outside contour = 6309, contour level = 0.4 
    16160  
    16161 Position of Kendall.pdb (#1.6) relative to
    16162 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16163 Matrix rotation and translation 
    16164 -0.96492503 0.25087866 0.07732802 250.14635322 
    16165 -0.15793905 -0.31947148 -0.93434107 240.24722468 
    16166 -0.20970221 -0.91378206 0.34788959 238.04777435 
    16167 Axis 0.04112288 0.57412827 -0.81773201 
    16168 Axis point 151.78549934 184.11679070 0.00000000 
    16169 Rotation angle (degrees) 165.52423524 
    16170 Shift along axis -46.43982444 
    16171  
    16172 
    16173 > view matrix models
    16174 > #2,-0.089943,-0.28722,-0.95363,1057.8,0.067258,0.95358,-0.29354,-451.63,0.99367,-0.090542,-0.06645,202.83
    16175 
    16176 > fitmap #1.6 inMap #2
    16177 
    16178 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16179 (#2) using 10778 atoms 
    16180 average map value = 0.647, steps = 112 
    16181 shifted from previous position = 28.7 
    16182 rotated from previous position = 13 degrees 
    16183 atoms outside contour = 6582, contour level = 0.4 
    16184  
    16185 Position of Kendall.pdb (#1.6) relative to
    16186 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16187 Matrix rotation and translation 
    16188 0.96594815 -0.22382108 -0.12980116 114.52700272 
    16189 -0.03325870 0.39010184 -0.92017084 221.23699937 
    16190 0.25658936 0.89315421 0.36937419 130.20945085 
    16191 Axis 0.97291700 -0.20731303 0.10224388 
    16192 Axis point 0.00000000 31.02846190 237.63437020 
    16193 Rotation angle (degrees) 68.73315039 
    16194 Shift along axis 78.87307526 
    16195  
    16196 
    16197 > select subtract #2
    16198 
    16199 Nothing selected 
    16200 
    16201 > fitmap #1.6 inMap #2
    16202 
    16203 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16204 (#2) using 10778 atoms 
    16205 average map value = 0.647, steps = 68 
    16206 shifted from previous position = 0.891 
    16207 rotated from previous position = 0.0208 degrees 
    16208 atoms outside contour = 6579, contour level = 0.4 
    16209  
    16210 Position of Kendall.pdb (#1.6) relative to
    16211 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16212 Matrix rotation and translation 
    16213 0.96429435 -0.25472638 -0.07246319 112.48357482 
    16214 0.02717594 0.36734931 -0.92968593 217.51230085 
    16215 0.26343489 0.89452151 0.36115533 129.79439772 
    16216 Axis 0.97230180 -0.17903353 0.15025382 
    16217 Axis point 0.00000000 33.28721331 228.62911439 
    16218 Rotation angle (degrees) 69.73274928 
    16219 Shift along axis 89.92809017 
    16220  
    16221 
    16222 > select add #1.6
    16223 
    16224 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    16225 
    16226 > view matrix models
    16227 > #1.6,-0.32232,-0.94356,-0.076205,869.97,-0.041933,0.094654,-0.99463,-273.68,0.9457,-0.31739,-0.070076,289.58
    16228 
    16229 > fitmap #1.6 inMap #2
    16230 
    16231 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16232 (#2) using 10778 atoms 
    16233 average map value = 0.647, steps = 72 
    16234 shifted from previous position = 11 
    16235 rotated from previous position = 0.0234 degrees 
    16236 atoms outside contour = 6584, contour level = 0.4 
    16237  
    16238 Position of Kendall.pdb (#1.6) relative to
    16239 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16240 Matrix rotation and translation 
    16241 0.96436908 -0.25438644 -0.07266261 112.43659745 
    16242 0.02689459 0.36749619 -0.92963606 217.49713378 
    16243 0.26319009 0.89455792 0.36124361 129.78788417 
    16244 Axis 0.97235394 -0.17902027 0.14993182 
    16245 Axis point 0.00000000 33.23838593 228.64743542 
    16246 Rotation angle (degrees) 69.72328556 
    16247 Shift along axis 89.85110637 
    16248  
    16249 
    16250 > ui mousemode right "rotate selected models"
    16251 
    16252 > view matrix models
    16253 > #1.6,0.085691,-0.99002,-0.1119,871.44,-0.25909,0.086308,-0.96199,-276.15,0.96205,0.11143,-0.2491,280.6
    16254 
    16255 > fitmap #1.6 inMap #2
    16256 
    16257 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16258 (#2) using 10778 atoms 
    16259 average map value = 0.6452, steps = 104 
    16260 shifted from previous position = 11.3 
    16261 rotated from previous position = 23.3 degrees 
    16262 atoms outside contour = 6309, contour level = 0.4 
    16263  
    16264 Position of Kendall.pdb (#1.6) relative to
    16265 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16266 Matrix rotation and translation 
    16267 0.94119561 -0.22104523 -0.25551886 109.62849908 
    16268 -0.18537685 0.29441719 -0.93752542 221.26127828 
    16269 0.28246474 0.92976196 0.23612752 133.12324185 
    16270 Axis 0.96075175 -0.27680189 0.01835200 
    16271 Axis point 0.00000000 38.88020021 220.48023257 
    16272 Rotation angle (degrees) 76.35707808 
    16273 Shift along axis 46.52331000 
    16274  
    16275 
    16276 > ui mousemode right zoom
    16277 
    16278 > ui mousemode right "translate selected models"
    16279 
    16280 > view matrix models
    16281 > #1.6,-0.27855,-0.9587,0.057499,868.57,-0.25124,0.01495,-0.96781,-272.57,0.92698,-0.28403,-0.24502,287.18
    16282 
    16283 > fitmap #1.6 inMap #2
    16284 
    16285 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16286 (#2) using 10778 atoms 
    16287 average map value = 0.647, steps = 112 
    16288 shifted from previous position = 7.14 
    16289 rotated from previous position = 13 degrees 
    16290 atoms outside contour = 6580, contour level = 0.4 
    16291  
    16292 Position of Kendall.pdb (#1.6) relative to
    16293 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16294 Matrix rotation and translation 
    16295 0.96430981 -0.25464845 -0.07253133 112.47524878 
    16296 0.02708930 0.36738118 -0.92967587 217.50899460 
    16297 0.26338722 0.89453061 0.36116756 129.79303153 
    16298 Axis 0.97231268 -0.17904655 0.15016786 
    16299 Axis point 0.00000000 33.27652127 228.63376510 
    16300 Rotation angle (degrees) 69.73093089 
    16301 Shift along axis 89.90761818 
    16302  
    16303 
    16304 > fitmap #1.6 inMap #2
    16305 
    16306 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16307 (#2) using 10778 atoms 
    16308 average map value = 0.647, steps = 76 
    16309 shifted from previous position = 9.5 
    16310 rotated from previous position = 0.0254 degrees 
    16311 atoms outside contour = 6583, contour level = 0.4 
    16312  
    16313 Position of Kendall.pdb (#1.6) relative to
    16314 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16315 Matrix rotation and translation 
    16316 0.90177494 -0.40732369 0.14453148 114.79477343 
    16317 -0.33594765 -0.87097334 -0.35853099 255.52407575 
    16318 0.27192130 0.27475921 -0.92226146 198.55518010 
    16319 Axis 0.97443195 -0.19601236 0.10982500 
    16320 Axis point 0.00000000 123.07919910 116.10966747 
    16321 Rotation angle (degrees) 161.03723945 
    16322 Shift along axis 83.58013914 
    16323  
    16324 
    16325 > fitmap #1.6 inMap #2
    16326 
    16327 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16328 (#2) using 10778 atoms 
    16329 average map value = 0.647, steps = 40 
    16330 shifted from previous position = 0.0618 
    16331 rotated from previous position = 0.036 degrees 
    16332 atoms outside contour = 6579, contour level = 0.4 
    16333  
    16334 Position of Kendall.pdb (#1.6) relative to
    16335 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16336 Matrix rotation and translation 
    16337 0.90153695 -0.40769950 0.14495596 114.85530169 
    16338 -0.33621201 -0.87090401 -0.35845159 255.51842698 
    16339 0.27238333 0.27442138 -0.92222570 198.58474884 
    16340 Axis 0.97437007 -0.19618694 0.11006201 
    16341 Axis point 0.00000000 123.10238909 116.09522316 
    16342 Rotation angle (degrees) 161.04896009 
    16343 Shift along axis 83.63882650 
    16344  
    16345 
    16346 > view matrix models
    16347 > #1.6,-0.32234,-0.94356,-0.07614,859.15,-0.041869,0.094565,-0.99464,-280.03,0.9457,-0.31742,-0.069988,289.16
    16348 
    16349 > fitmap #1.6 inMap #2
    16350 
    16351 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16352 (#2) using 10778 atoms 
    16353 average map value = 0.647, steps = 48 
    16354 shifted from previous position = 2.98 
    16355 rotated from previous position = 0.0164 degrees 
    16356 atoms outside contour = 6579, contour level = 0.4 
    16357  
    16358 Position of Kendall.pdb (#1.6) relative to
    16359 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16360 Matrix rotation and translation 
    16361 0.90162688 -0.40758644 0.14471440 114.84597748 
    16362 -0.33615873 -0.87090572 -0.35849741 255.51045771 
    16363 0.27215135 0.27458385 -0.92224583 198.58375150 
    16364 Axis 0.97439333 -0.19614182 0.10993643 
    16365 Axis point 0.00000000 123.08869588 116.10845245 
    16366 Rotation angle (degrees) 161.04295482 
    16367 Shift along axis 83.62045602 
    16368  
    16369 
    16370 > fitmap #1.6 inMap #2
    16371 
    16372 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16373 (#2) using 10778 atoms 
    16374 average map value = 0.647, steps = 40 
    16375 shifted from previous position = 0.0523 
    16376 rotated from previous position = 0.0154 degrees 
    16377 atoms outside contour = 6583, contour level = 0.4 
    16378  
    16379 Position of Kendall.pdb (#1.6) relative to
    16380 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16381 Matrix rotation and translation 
    16382 0.90171953 -0.40741846 0.14461012 114.80278467 
    16383 -0.33598997 -0.87091991 -0.35862113 255.52148135 
    16384 0.27205277 0.27478809 -0.92221408 198.55196092 
    16385 Axis 0.97441703 -0.19605380 0.10988337 
    16386 Axis point 0.00000000 123.07835140 116.10962991 
    16387 Rotation angle (degrees) 161.03323789 
    16388 Shift along axis 83.58738965 
    16389  
    16390 
    16391 > fitmap #1.6 inMap #2
    16392 
    16393 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16394 (#2) using 10778 atoms 
    16395 average map value = 0.647, steps = 48 
    16396 shifted from previous position = 0.00833 
    16397 rotated from previous position = 0.00482 degrees 
    16398 atoms outside contour = 6583, contour level = 0.4 
    16399  
    16400 Position of Kendall.pdb (#1.6) relative to
    16401 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16402 Matrix rotation and translation 
    16403 0.90172316 -0.40738506 0.14468152 114.79556078 
    16404 -0.33594748 -0.87095069 -0.35858618 255.52452762 
    16405 0.27209319 0.27474003 -0.92221647 198.55598661 
    16406 Axis 0.97441819 -0.19603207 0.10991189 
    16407 Axis point 0.00000000 123.08004155 116.10726581 
    16408 Rotation angle (degrees) 161.03584212 
    16409 Shift along axis 83.59154523 
    16410  
    16411 
    16412 > fitmap #1.6 inMap #2
    16413 
    16414 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16415 (#2) using 10778 atoms 
    16416 average map value = 0.647, steps = 28 
    16417 shifted from previous position = 0.049 
    16418 rotated from previous position = 0.017 degrees 
    16419 atoms outside contour = 6581, contour level = 0.4 
    16420  
    16421 Position of Kendall.pdb (#1.6) relative to
    16422 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16423 Matrix rotation and translation 
    16424 0.90171701 -0.40749573 0.14440797 114.83565189 
    16425 -0.33613324 -0.87087924 -0.35858562 255.50772619 
    16426 0.27188408 0.27480239 -0.92225956 198.57223505 
    16427 Axis 0.97441642 -0.19611172 0.10978543 
    16428 Axis point 0.00000000 123.07633952 116.12216577 
    16429 Rotation angle (degrees) 161.03388494 
    16430 Shift along axis 83.59002409 
    16431  
    16432 
    16433 > fitmap #1.6 inMap #2
    16434 
    16435 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16436 (#2) using 10778 atoms 
    16437 average map value = 0.647, steps = 40 
    16438 shifted from previous position = 0.0284 
    16439 rotated from previous position = 0.0486 degrees 
    16440 atoms outside contour = 6578, contour level = 0.4 
    16441  
    16442 Position of Kendall.pdb (#1.6) relative to
    16443 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16444 Matrix rotation and translation 
    16445 0.90145440 -0.40781389 0.14514748 114.86654078 
    16446 -0.33621242 -0.87082719 -0.35863780 255.50720110 
    16447 0.27265591 0.27449520 -0.92212318 198.59365911 
    16448 Axis 0.97434765 -0.19622661 0.11018968 
    16449 Axis point 0.00000000 123.09310174 116.10236234 
    16450 Rotation angle (degrees) 161.04042351 
    16451 Shift along axis 83.66560369 
    16452  
    16453 
    16454 > fitmap #1.6 inMap #2
    16455 
    16456 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16457 (#2) using 10778 atoms 
    16458 average map value = 0.647, steps = 24 
    16459 shifted from previous position = 0.00762 
    16460 rotated from previous position = 0.00585 degrees 
    16461 atoms outside contour = 6580, contour level = 0.4 
    16462  
    16463 Position of Kendall.pdb (#1.6) relative to
    16464 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16465 Matrix rotation and translation 
    16466 0.90145051 -0.40781824 0.14515943 114.87002495 
    16467 -0.33624077 -0.87085466 -0.35854450 255.50764421 
    16468 0.27263381 0.27440156 -0.92215758 198.60023870 
    16469 Axis 0.97434707 -0.19623204 0.11018521 
    16470 Axis point 0.00000000 123.09846680 116.09857505 
    16471 Rotation angle (degrees) 161.04622298 
    16472 Shift along axis 83.66729487 
    16473  
    16474 
    16475 > fitmap #1.6 inMap #2
    16476 
    16477 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16478 (#2) using 10778 atoms 
    16479 average map value = 0.647, steps = 40 
    16480 shifted from previous position = 0.0572 
    16481 rotated from previous position = 0.0332 degrees 
    16482 atoms outside contour = 6582, contour level = 0.4 
    16483  
    16484 Position of Kendall.pdb (#1.6) relative to
    16485 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16486 Matrix rotation and translation 
    16487 0.90167970 -0.40744447 0.14478503 114.81725913 
    16488 -0.33598400 -0.87094904 -0.35855596 255.52232646 
    16489 0.27219209 0.27465714 -0.92221198 198.56518919 
    16490 Axis 0.97440698 -0.19605774 0.10996548 
    16491 Axis point 0.00000000 123.08528388 116.10398446 
    16492 Rotation angle (degrees) 161.03913140 
    16493 Shift along axis 83.61692529 
    16494  
    16495 
    16496 > fitmap #1.6 inMap #2
    16497 
    16498 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16499 (#2) using 10778 atoms 
    16500 average map value = 0.647, steps = 24 
    16501 shifted from previous position = 0.013 
    16502 rotated from previous position = 0.0112 degrees 
    16503 atoms outside contour = 6583, contour level = 0.4 
    16504  
    16505 Position of Kendall.pdb (#1.6) relative to
    16506 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16507 Matrix rotation and translation 
    16508 0.90173912 -0.40736668 0.14463381 114.80442568 
    16509 -0.33593294 -0.87094162 -0.35862182 255.52001133 
    16510 0.27205825 0.27479602 -0.92221010 198.55790003 
    16511 Axis 0.97442219 -0.19602416 0.10989053 
    16512 Axis point 0.00000000 123.07557422 116.11206617 
    16513 Rotation angle (degrees) 161.03307413 
    16514 Shift along axis 83.59951630 
    16515  
    16516 
    16517 > fitmap #1.6 inMap #2
    16518 
    16519 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16520 (#2) using 10778 atoms 
    16521 average map value = 0.647, steps = 40 
    16522 shifted from previous position = 0.0568 
    16523 rotated from previous position = 0.0211 degrees 
    16524 atoms outside contour = 6579, contour level = 0.4 
    16525  
    16526 Position of Kendall.pdb (#1.6) relative to
    16527 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16528 Matrix rotation and translation 
    16529 0.90159490 -0.40761395 0.14483608 114.85547372 
    16530 -0.33613616 -0.87089471 -0.35854532 255.50922843 
    16531 0.27228511 0.27457795 -0.92220810 198.58932413 
    16532 Axis 0.97438479 -0.19614569 0.11000523 
    16533 Axis point 0.00000000 123.08815588 116.10893488 
    16534 Rotation angle (degrees) 161.04147613 
    16535 Shift along axis 83.64225738 
    16536  
    16537 
    16538 > fitmap #1.6 inMap #2
    16539 
    16540 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16541 (#2) using 10778 atoms 
    16542 average map value = 0.647, steps = 44 
    16543 shifted from previous position = 0.0623 
    16544 rotated from previous position = 0.0211 degrees 
    16545 atoms outside contour = 6583, contour level = 0.4 
    16546  
    16547 Position of Kendall.pdb (#1.6) relative to
    16548 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16549 Matrix rotation and translation 
    16550 0.90173979 -0.40737571 0.14460416 114.79879360 
    16551 -0.33596349 -0.87094840 -0.35857674 255.52134520 
    16552 0.27201828 0.27476115 -0.92223228 198.55602009 
    16553 Axis 0.97442255 -0.19603310 0.10987133 
    16554 Axis point 0.00000000 123.07828626 116.10942519 
    16555 Rotation angle (degrees) 161.03556688 
    16556 Shift along axis 83.58750603 
    16557  
    16558 
    16559 > fitmap #1.6 inMap #2
    16560 
    16561 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16562 (#2) using 10778 atoms 
    16563 average map value = 0.647, steps = 28 
    16564 shifted from previous position = 0.0749 
    16565 rotated from previous position = 0.0356 degrees 
    16566 atoms outside contour = 6579, contour level = 0.4 
    16567  
    16568 Position of Kendall.pdb (#1.6) relative to
    16569 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16570 Matrix rotation and translation 
    16571 0.90150092 -0.40775464 0.14502492 114.86838283 
    16572 -0.33622080 -0.87086627 -0.35853504 255.50674832 
    16573 0.27249170 0.27445923 -0.92218242 198.59854430 
    16574 Axis 0.97436027 -0.19620804 0.11011116 
    16575 Axis point 0.00000000 123.09496103 116.10310525 
    16576 Rotation angle (degrees) 161.04499119 
    16577 Shift along axis 83.65862562 
    16578  
    16579 
    16580 > fitmap #1.6 inMap #2
    16581 
    16582 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16583 (#2) using 10778 atoms 
    16584 average map value = 0.647, steps = 40 
    16585 shifted from previous position = 0.0519 
    16586 rotated from previous position = 0.0122 degrees 
    16587 atoms outside contour = 6583, contour level = 0.4 
    16588  
    16589 Position of Kendall.pdb (#1.6) relative to
    16590 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16591 Matrix rotation and translation 
    16592 0.90158562 -0.40757343 0.14500780 114.82414226 
    16593 -0.33603899 -0.87092016 -0.35857457 255.52073746 
    16594 0.27243575 0.27455736 -0.92216974 198.57233189 
    16595 Axis 0.97438232 -0.19611006 0.11009063 
    16596 Axis point 0.00000000 123.09035146 116.09819966 
    16597 Rotation angle (degrees) 161.04115674 
    16598 Shift along axis 83.63337929 
    16599  
    16600 
    16601 > fitmap #1.6 inMap #2
    16602 
    16603 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16604 (#2) using 10778 atoms 
    16605 average map value = 0.647, steps = 44 
    16606 shifted from previous position = 0.0464 
    16607 rotated from previous position = 0.0131 degrees 
    16608 atoms outside contour = 6580, contour level = 0.4 
    16609  
    16610 Position of Kendall.pdb (#1.6) relative to
    16611 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16612 Matrix rotation and translation 
    16613 0.90150005 -0.40775233 0.14503683 114.86520573 
    16614 -0.33622571 -0.87087910 -0.35849928 255.51077770 
    16615 0.27248852 0.27442196 -0.92219445 198.59392057 
    16616 Axis 0.97436021 -0.19620744 0.11011274 
    16617 Axis point 0.00000000 123.09896856 116.09831548 
    16618 Rotation angle (degrees) 161.04726026 
    16619 Shift along axis 83.65469011 
    16620  
    16621 
    16622 > fitmap #1.6 inMap #2
    16623 
    16624 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16625 (#2) using 10778 atoms 
    16626 average map value = 0.647, steps = 40 
    16627 shifted from previous position = 0.0582 
    16628 rotated from previous position = 0.0313 degrees 
    16629 atoms outside contour = 6584, contour level = 0.4 
    16630  
    16631 Position of Kendall.pdb (#1.6) relative to
    16632 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16633 Matrix rotation and translation 
    16634 0.90171356 -0.40740531 0.14468436 114.81116897 
    16635 -0.33597884 -0.87095621 -0.35854339 255.52361112 
    16636 0.27208629 0.27469251 -0.92223266 198.55999294 
    16637 Axis 0.97441586 -0.19604457 0.10991020 
    16638 Axis point 0.00000000 123.08404246 116.10528715 
    16639 Rotation angle (degrees) 161.03860231 
    16640 Shift along axis 83.60357647 
    16641  
    16642 
    16643 > view matrix models
    16644 > #1.6,-0.32202,-0.94366,-0.076248,868.39,-0.042118,0.094738,-0.99461,-285.46,0.9458,-0.31707,-0.070252,295.01
    16645 
    16646 > ui mousemode right "rotate selected models"
    16647 
    16648 > view matrix models
    16649 > #1.6,0.034654,-0.94027,0.33865,879.47,0.22693,0.33741,0.9136,-275.53,-0.97329,0.04519,0.22507,237.95
    16650 
    16651 > view matrix models
    16652 > #1.6,0.1184,-0.99285,-0.014991,881.39,0.63176,0.063674,0.77254,-260.71,-0.76607,-0.10094,0.63479,247.24
    16653 
    16654 > ui mousemode right "translate selected models"
    16655 
    16656 > view matrix models
    16657 > #1.6,0.1184,-0.99285,-0.014991,884.1,0.63176,0.063674,0.77254,-242.17,-0.76607,-0.10094,0.63479,242.72
    16658 
    16659 > ui mousemode right "rotate selected models"
    16660 
    16661 > view matrix models
    16662 > #1.6,0.088896,-0.88638,0.45434,883.21,-0.36815,0.3946,0.84188,-274.37,-0.92551,-0.2421,-0.29124,237.48
    16663 
    16664 > fitmap #1.6 inMap #2
    16665 
    16666 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16667 (#2) using 10778 atoms 
    16668 average map value = 0.6904, steps = 160 
    16669 shifted from previous position = 30.1 
    16670 rotated from previous position = 33.7 degrees 
    16671 atoms outside contour = 6073, contour level = 0.4 
    16672  
    16673 Position of Kendall.pdb (#1.6) relative to
    16674 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16675 Matrix rotation and translation 
    16676 -0.94662623 -0.29755527 0.12393430 74.48166371 
    16677 0.28839770 -0.61013133 0.73794746 269.39131856 
    16678 -0.14396397 0.73430266 0.66338063 215.29763795 
    16679 Axis -0.00565698 0.41579682 0.90943994 
    16680 Axis point 25.02920379 92.41325892 0.00000000 
    16681 Rotation angle (degrees) 161.20697463 
    16682 Shift along axis 307.39098382 
    16683  
    16684 
    16685 > fitmap #1.6 inMap #2
    16686 
    16687 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16688 (#2) using 10778 atoms 
    16689 average map value = 0.6902, steps = 116 
    16690 shifted from previous position = 18.9 
    16691 rotated from previous position = 10.6 degrees 
    16692 atoms outside contour = 6169, contour level = 0.4 
    16693  
    16694 Position of Kendall.pdb (#1.6) relative to
    16695 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16696 Matrix rotation and translation 
    16697 -0.90003069 -0.43216636 0.05636518 57.74596184 
    16698 -0.23347108 0.58730161 0.77496323 206.84106680 
    16699 -0.36801642 0.68433093 -0.62948787 143.20694749 
    16700 Axis -0.18989437 0.88917168 0.41630980 
    16701 Axis point 54.11771149 0.00000000 16.24408741 
    16702 Rotation angle (degrees) 166.19378974 
    16703 Shift along axis 232.57004164 
    16704  
    16705 
    16706 > fitmap #1.6 inMap #2
    16707 
    16708 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16709 (#2) using 10778 atoms 
    16710 average map value = 0.6901, steps = 72 
    16711 shifted from previous position = 5.54 
    16712 rotated from previous position = 0.0334 degrees 
    16713 atoms outside contour = 6170, contour level = 0.4 
    16714  
    16715 Position of Kendall.pdb (#1.6) relative to
    16716 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16717 Matrix rotation and translation 
    16718 -0.79543352 -0.33207597 0.50696264 88.71970001 
    16719 -0.08771309 0.89078924 0.44587079 224.37168741 
    16720 -0.59965990 0.31019324 -0.73769108 93.13230489 
    16721 Axis -0.11887210 0.96955279 0.21409533 
    16722 Axis point 65.31328637 0.00000000 3.09677226 
    16723 Rotation angle (degrees) 145.20184929 
    16724 Shift along axis 226.93308970 
    16725  
    16726 
    16727 > fitmap #1.6 inMap #2
    16728 
    16729 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16730 (#2) using 10778 atoms 
    16731 average map value = 0.6902, steps = 44 
    16732 shifted from previous position = 0.0633 
    16733 rotated from previous position = 0.0242 degrees 
    16734 atoms outside contour = 6171, contour level = 0.4 
    16735  
    16736 Position of Kendall.pdb (#1.6) relative to
    16737 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16738 Matrix rotation and translation 
    16739 -0.79554846 -0.33221728 0.50668963 88.67917884 
    16740 -0.08774227 0.89062763 0.44618779 224.34917436 
    16741 -0.59950314 0.31050584 -0.73768699 93.17912901 
    16742 Axis -0.11891681 0.96950934 0.21426718 
    16743 Axis point 65.29617206 0.00000000 3.11365626 
    16744 Rotation angle (degrees) 145.21552873 
    16745 Shift along axis 226.92840486 
    16746  
    16747 
    16748 > view matrix models
    16749 > #1.6,0.46811,-0.75452,0.45996,851.68,0.14994,0.58079,0.80013,-240.26,-0.87085,-0.30559,0.38501,246.48
    16750 
    16751 > ui mousemode right "translate selected models"
    16752 
    16753 > view matrix models
    16754 > #1.6,0.46811,-0.75452,0.45996,870.75,0.14994,0.58079,0.80013,-251.27,-0.87085,-0.30559,0.38501,258.19
    16755 
    16756 > fitmap #1.6 inMap #2
    16757 
    16758 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16759 (#2) using 10778 atoms 
    16760 average map value = 0.6902, steps = 124 
    16761 shifted from previous position = 25.5 
    16762 rotated from previous position = 4.55 degrees 
    16763 atoms outside contour = 6170, contour level = 0.4 
    16764  
    16765 Position of Kendall.pdb (#1.6) relative to
    16766 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16767 Matrix rotation and translation 
    16768 -0.79543538 -0.33219973 0.50687864 88.68209950 
    16769 -0.08770567 0.89067567 0.44609907 224.35152283 
    16770 -0.59965853 0.31038678 -0.73761079 93.17432258 
    16771 Axis -0.11890781 0.96952093 0.21421974 
    16772 Axis point 65.30007487 0.00000000 3.11005135 
    16773 Rotation angle (degrees) 145.20361294 
    16774 Shift along axis 226.92828293 
    16775  
    16776 
    16777 > view matrix models
    16778 > #1.6,0.40955,-0.76605,0.49541,872.85,0.17887,0.59993,0.7798,-250.93,-0.89458,-0.23075,0.38273,257.75
    16779 
    16780 > fitmap #1.6 inMap #2
    16781 
    16782 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16783 (#2) using 10778 atoms 
    16784 average map value = 0.6902, steps = 156 
    16785 shifted from previous position = 28.3 
    16786 rotated from previous position = 0.0299 degrees 
    16787 atoms outside contour = 6167, contour level = 0.4 
    16788  
    16789 Position of Kendall.pdb (#1.6) relative to
    16790 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16791 Matrix rotation and translation 
    16792 -0.79523110 -0.33264381 0.50690793 88.68025924 
    16793 -0.08813087 0.89059779 0.44617076 224.33919035 
    16794 -0.59986709 0.31013455 -0.73754730 93.16762973 
    16795 Axis -0.11916309 0.96949726 0.21418501 
    16796 Axis point 65.33227333 0.00000000 3.09736228 
    16797 Rotation angle (degrees) 145.19408144 
    16798 Shift along axis 226.88392692 
    16799  
    16800 
    16801 > fitmap #1.6 inMap #2
    16802 
    16803 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16804 (#2) using 10778 atoms 
    16805 average map value = 0.6902, steps = 44 
    16806 shifted from previous position = 0.00461 
    16807 rotated from previous position = 0.00864 degrees 
    16808 atoms outside contour = 6166, contour level = 0.4 
    16809  
    16810 Position of Kendall.pdb (#1.6) relative to
    16811 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16812 Matrix rotation and translation 
    16813 -0.79530622 -0.33255661 0.50684729 88.68178213 
    16814 -0.08803959 0.89059314 0.44619805 224.34145904 
    16815 -0.59978089 0.31024139 -0.73757247 93.16910893 
    16816 Axis -0.11910916 0.96949684 0.21421692 
    16817 Axis point 65.32450680 0.00000000 3.09869212 
    16818 Rotation angle (degrees) 145.19934842 
    16819 Shift along axis 226.89392185 
    16820  
    16821 
    16822 > view matrix models
    16823 > #1.6,0.40984,-0.76595,0.49532,872.35,0.17865,0.59991,0.77986,-250.48,-0.89449,-0.23113,0.38271,257.37
    16824 
    16825 > fitmap #1.6 inMap #2
    16826 
    16827 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16828 (#2) using 10778 atoms 
    16829 average map value = 0.6902, steps = 120 
    16830 shifted from previous position = 27.5 
    16831 rotated from previous position = 0.04 degrees 
    16832 atoms outside contour = 6170, contour level = 0.4 
    16833  
    16834 Position of Kendall.pdb (#1.6) relative to
    16835 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16836 Matrix rotation and translation 
    16837 -0.79571104 -0.33220445 0.50644269 88.67589983 
    16838 -0.08779158 0.89059028 0.44625264 224.34630857 
    16839 -0.59928011 0.31062667 -0.73781732 93.17990911 
    16840 Axis -0.11891732 0.96950158 0.21430205 
    16841 Axis point 65.28980515 0.00000000 3.11998807 
    16842 Rotation angle (degrees) 145.23211649 
    16843 Shift along axis 226.92764503 
    16844  
    16845 
    16846 > fitmap #1.6 inMap #2
    16847 
    16848 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16849 (#2) using 10778 atoms 
    16850 average map value = 0.6902, steps = 28 
    16851 shifted from previous position = 0.027 
    16852 rotated from previous position = 0.02 degrees 
    16853 atoms outside contour = 6166, contour level = 0.4 
    16854  
    16855 Position of Kendall.pdb (#1.6) relative to
    16856 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16857 Matrix rotation and translation 
    16858 -0.79550415 -0.33240552 0.50663574 88.66357539 
    16859 -0.08789814 0.89056277 0.44628655 224.33666668 
    16860 -0.59953911 0.31049039 -0.73766426 93.19138752 
    16861 Axis -0.11901658 0.96949096 0.21429496 
    16862 Axis point 65.30115367 0.00000000 3.11627633 
    16863 Rotation angle (degrees) 145.21541885 
    16864 Shift along axis 226.91037986 
    16865  
    16866 
    16867 > view matrix models
    16868 > #1.6,0.40953,-0.76612,0.49532,872.75,0.17864,0.59977,0.77998,-247.39,-0.89463,-0.23094,0.38249,256.35
    16869 
    16870 > fitmap #1.6 inMap #2
    16871 
    16872 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16873 (#2) using 10778 atoms 
    16874 average map value = 0.6903, steps = 168 
    16875 shifted from previous position = 26.1 
    16876 rotated from previous position = 10.5 degrees 
    16877 atoms outside contour = 6072, contour level = 0.4 
    16878  
    16879 Position of Kendall.pdb (#1.6) relative to
    16880 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16881 Matrix rotation and translation 
    16882 -0.88989708 -0.22134947 0.39885796 87.08236581 
    16883 -0.02449384 0.89630406 0.44276280 226.25889174 
    16884 -0.45550336 0.38424368 -0.80304013 97.28329832 
    16885 Axis -0.06659755 0.97230388 0.22403108 
    16886 Axis point 56.57604967 0.00000000 10.34042538 
    16887 Rotation angle (degrees) 153.93765484 
    16888 Shift along axis 235.98740990 
    16889  
    16890 
    16891 > fitmap #1.6 inMap #2
    16892 
    16893 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16894 (#2) using 10778 atoms 
    16895 average map value = 0.6904, steps = 40 
    16896 shifted from previous position = 0.04 
    16897 rotated from previous position = 0.123 degrees 
    16898 atoms outside contour = 6072, contour level = 0.4 
    16899  
    16900 Position of Kendall.pdb (#1.6) relative to
    16901 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16902 Matrix rotation and translation 
    16903 -0.89060488 -0.21944457 0.39833039 87.06373812 
    16904 -0.02296263 0.89646010 0.44252889 226.28973451 
    16905 -0.45419791 0.38497160 -0.80343083 97.34292096 
    16906 Axis -0.06564710 0.97235311 0.22409793 
    16907 Axis point 56.44496843 0.00000000 10.41844984 
    16908 Rotation angle (degrees) 153.99917577 
    16909 Shift along axis 236.13239266 
    16910  
    16911 
    16912 > fitmap #1.6 inMap #2
    16913 
    16914 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16915 (#2) using 10778 atoms 
    16916 average map value = 0.6904, steps = 48 
    16917 shifted from previous position = 0.0481 
    16918 rotated from previous position = 0.00932 degrees 
    16919 atoms outside contour = 6072, contour level = 0.4 
    16920  
    16921 Position of Kendall.pdb (#1.6) relative to
    16922 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16923 Matrix rotation and translation 
    16924 -0.89062761 -0.21931200 0.39835259 87.09725423 
    16925 -0.02288793 0.89652265 0.44240604 226.31384337 
    16926 -0.45415710 0.38490149 -0.80348748 97.32087855 
    16927 Axis -0.06558953 0.97237017 0.22404075 
    16928 Axis point 56.45384721 0.00000000 10.40999205 
    16929 Rotation angle (degrees) 154.00027622 
    16930 Shift along axis 236.15200601 
    16931  
    16932 
    16933 > fitmap #1.6 inMap #2
    16934 
    16935 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16936 (#2) using 10778 atoms 
    16937 average map value = 0.6904, steps = 44 
    16938 shifted from previous position = 0.0112 
    16939 rotated from previous position = 0.0031 degrees 
    16940 atoms outside contour = 6074, contour level = 0.4 
    16941  
    16942 Position of Kendall.pdb (#1.6) relative to
    16943 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16944 Matrix rotation and translation 
    16945 -0.89063331 -0.21931031 0.39834077 87.08968729 
    16946 -0.02286728 0.89650166 0.44244964 226.31130904 
    16947 -0.45414696 0.38495133 -0.80346934 97.32859312 
    16948 Axis -0.06558371 0.97236455 0.22406685 
    16949 Axis point 56.44940220 0.00000000 10.41220331 
    16950 Rotation angle (degrees) 154.00083445 
    16951 Shift along axis 236.15354084 
    16952  
    16953 
    16954 > fitmap #1.6 inMap #2
    16955 
    16956 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16957 (#2) using 10778 atoms 
    16958 average map value = 0.6904, steps = 44 
    16959 shifted from previous position = 0.0124 
    16960 rotated from previous position = 0.00407 degrees 
    16961 atoms outside contour = 6075, contour level = 0.4 
    16962  
    16963 Position of Kendall.pdb (#1.6) relative to
    16964 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16965 Matrix rotation and translation 
    16966 -0.89062068 -0.21931099 0.39836864 87.08250938 
    16967 -0.02288620 0.89652883 0.44239360 226.31256738 
    16968 -0.45417078 0.38488767 -0.80348637 97.31887194 
    16969 Axis -0.06558893 0.97237174 0.22403411 
    16970 Axis point 56.44650931 0.00000000 10.41129365 
    16971 Rotation angle (degrees) 153.99934684 
    16972 Shift along axis 236.15104472 
    16973  
    16974 
    16975 > fitmap #1.6 inMap #2
    16976 
    16977 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16978 (#2) using 10778 atoms 
    16979 average map value = 0.6904, steps = 40 
    16980 shifted from previous position = 0.0432 
    16981 rotated from previous position = 0.0197 degrees 
    16982 atoms outside contour = 6074, contour level = 0.4 
    16983  
    16984 Position of Kendall.pdb (#1.6) relative to
    16985 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    16986 Matrix rotation and translation 
    16987 -0.89058360 -0.21960562 0.39828921 87.04836000 
    16988 -0.02322385 0.89652256 0.44238871 226.28278929 
    16989 -0.45422635 0.38473424 -0.80352844 97.32759414 
    16990 Axis -0.06576007 0.97237013 0.22399095 
    16991 Axis point 56.45163235 0.00000000 10.42400202 
    16992 Rotation angle (degrees) 154.00008249 
    16993 Shift along axis 236.10681909 
    16994  
    16995 
    16996 > fitmap #1.6 inMap #2
    16997 
    16998 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    16999 (#2) using 10778 atoms 
    17000 average map value = 0.6904, steps = 40 
    17001 shifted from previous position = 0.0414 
    17002 rotated from previous position = 0.0237 degrees 
    17003 atoms outside contour = 6072, contour level = 0.4 
    17004  
    17005 Position of Kendall.pdb (#1.6) relative to
    17006 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17007 Matrix rotation and translation 
    17008 -0.89072433 -0.21925840 0.39816578 87.08125145 
    17009 -0.02293502 0.89653103 0.44238661 226.29943712 
    17010 -0.45396500 0.38491250 -0.80359076 97.33712838 
    17011 Axis -0.06558421 0.97237386 0.22402632 
    17012 Axis point 56.44464580 0.00000000 10.42979500 
    17013 Rotation angle (degrees) 154.01280181 
    17014 Shift along axis 236.14258023 
    17015  
    17016 
    17017 > fitmap #1.6 inMap #2
    17018 
    17019 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17020 (#2) using 10778 atoms 
    17021 average map value = 0.6904, steps = 40 
    17022 shifted from previous position = 0.0375 
    17023 rotated from previous position = 0.0227 degrees 
    17024 atoms outside contour = 6072, contour level = 0.4 
    17025  
    17026 Position of Kendall.pdb (#1.6) relative to
    17027 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17028 Matrix rotation and translation 
    17029 -0.89057669 -0.21959341 0.39831140 87.05174054 
    17030 -0.02316389 0.89649184 0.44245410 226.28785429 
    17031 -0.45424296 0.38481279 -0.80348143 97.33210021 
    17032 Axis -0.06574150 0.97236164 0.22403325 
    17033 Axis point 56.45086003 0.00000000 10.41972513 
    17034 Rotation angle (degrees) 153.99856634 
    17035 Shift along axis 236.11634418 
    17036  
    17037 
    17038 > fitmap #1.6 inMap #2
    17039 
    17040 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17041 (#2) using 10778 atoms 
    17042 average map value = 0.6904, steps = 40 
    17043 shifted from previous position = 0.0211 
    17044 rotated from previous position = 0.033 degrees 
    17045 atoms outside contour = 6069, contour level = 0.4 
    17046  
    17047 Position of Kendall.pdb (#1.6) relative to
    17048 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17049 Matrix rotation and translation 
    17050 -0.89042465 -0.22008561 0.39837965 87.04435754 
    17051 -0.02364608 0.89649633 0.44241950 226.26905676 
    17052 -0.45451610 0.38452103 -0.80346665 97.31439939 
    17053 Axis -0.06600836 0.97236159 0.22395499 
    17054 Axis point 56.48142561 0.00000000 10.41052388 
    17055 Rotation angle (degrees) 153.98737401 
    17056 Shift along axis 236.06372973 
    17057  
    17058 
    17059 > fitmap #1.6 inMap #2
    17060 
    17061 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17062 (#2) using 10778 atoms 
    17063 average map value = 0.6904, steps = 44 
    17064 shifted from previous position = 0.0101 
    17065 rotated from previous position = 0.0318 degrees 
    17066 atoms outside contour = 6073, contour level = 0.4 
    17067  
    17068 Position of Kendall.pdb (#1.6) relative to
    17069 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17070 Matrix rotation and translation 
    17071 -0.89057102 -0.21959074 0.39832554 87.03983518 
    17072 -0.02317934 0.89651323 0.44240995 226.28991533 
    17073 -0.45425328 0.38476448 -0.80349874 97.31711965 
    17074 Axis -0.06574474 0.97236736 0.22400747 
    17075 Axis point 56.44441154 0.00000000 10.41625246 
    17076 Rotation angle (degrees) 153.99792925 
    17077 Shift along axis 236.11427773 
    17078  
    17079 
    17080 > fitmap #1.6 inMap #2
    17081 
    17082 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17083 (#2) using 10778 atoms 
    17084 average map value = 0.6904, steps = 40 
    17085 shifted from previous position = 0.0319 
    17086 rotated from previous position = 0.0128 degrees 
    17087 atoms outside contour = 6076, contour level = 0.4 
    17088  
    17089 Position of Kendall.pdb (#1.6) relative to
    17090 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17091 Matrix rotation and translation 
    17092 -0.89062161 -0.21938249 0.39832718 87.06273537 
    17093 -0.02298384 0.89653129 0.44238354 226.31155052 
    17094 -0.45416402 0.38484118 -0.80351246 97.31056348 
    17095 Axis -0.06563425 0.97237259 0.22401716 
    17096 Axis point 56.44118823 0.00000000 10.41117230 
    17097 Rotation angle (degrees) 154.00095176 
    17098 Shift along axis 236.14408753 
    17099  
    17100 
    17101 > fitmap #1.6 inMap #2
    17102 
    17103 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17104 (#2) using 10778 atoms 
    17105 average map value = 0.6904, steps = 40 
    17106 shifted from previous position = 0.0371 
    17107 rotated from previous position = 0.0283 degrees 
    17108 atoms outside contour = 6069, contour level = 0.4 
    17109  
    17110 Position of Kendall.pdb (#1.6) relative to
    17111 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17112 Matrix rotation and translation 
    17113 -0.89050017 -0.21985090 0.39834044 87.05069070 
    17114 -0.02339961 0.89647743 0.44247089 226.27701200 
    17115 -0.45438088 0.38469931 -0.80345779 97.32640190 
    17116 Axis -0.06587686 0.97235710 0.22401317 
    17117 Axis point 56.46754775 0.00000000 10.41410360 
    17118 Rotation angle (degrees) 153.99296327 
    17119 Shift along axis 236.08982968 
    17120  
    17121 
    17122 > fitmap #1.6 inMap #2
    17123 
    17124 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17125 (#2) using 10778 atoms 
    17126 average map value = 0.6904, steps = 40 
    17127 shifted from previous position = 0.0482 
    17128 rotated from previous position = 0.0159 degrees 
    17129 atoms outside contour = 6074, contour level = 0.4 
    17130  
    17131 Position of Kendall.pdb (#1.6) relative to
    17132 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17133 Matrix rotation and translation 
    17134 -0.89054501 -0.21959775 0.39837982 87.08350652 
    17135 -0.02322509 0.89656864 0.44229526 226.30005570 
    17136 -0.45430194 0.38463135 -0.80353497 97.30297407 
    17137 Axis -0.06575882 0.97238203 0.22393965 
    17138 Axis point 56.46889332 0.00000000 10.40947495 
    17139 Rotation angle (degrees) 153.99497645 
    17140 Shift along axis 236.11359245 
    17141  
    17142 
    17143 > view matrix models
    17144 > #1.6,0.23701,-0.81175,0.53375,866.86,0.15751,0.57424,0.80339,-246.79,-0.95865,-0.10634,0.26396,254.8
    17145 
    17146 > select add #1
    17147 
    17148 10778 atoms, 11624 bonds, 336 residues, 2 models selected 
    17149 
    17150 > select subtract #1
    17151 
    17152 Nothing selected 
    17153 
    17154 > fitmap #1.6 inMap #2
    17155 
    17156 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17157 (#2) using 10778 atoms 
    17158 average map value = 0.6904, steps = 148 
    17159 shifted from previous position = 24.7 
    17160 rotated from previous position = 0.0403 degrees 
    17161 atoms outside contour = 6073, contour level = 0.4 
    17162  
    17163 Position of Kendall.pdb (#1.6) relative to
    17164 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17165 Matrix rotation and translation 
    17166 -0.89080598 -0.21901569 0.39811669 87.05399435 
    17167 -0.02279620 0.89660603 0.44224177 226.29447618 
    17168 -0.45381175 0.38487599 -0.80369480 97.34074683 
    17169 Axis -0.06547757 0.97239498 0.22396581 
    17170 Axis point 56.41860650 0.00000000 10.44972924 
    17171 Rotation angle (degrees) 154.02003977 
    17172 Shift along axis 236.14852925 
    17173  
    17174 
    17175 > fitmap #1.6 inMap #2
    17176 
    17177 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17178 (#2) using 10778 atoms 
    17179 average map value = 0.6904, steps = 48 
    17180 shifted from previous position = 0.0513 
    17181 rotated from previous position = 0.0457 degrees 
    17182 atoms outside contour = 6071, contour level = 0.4 
    17183  
    17184 Position of Kendall.pdb (#1.6) relative to
    17185 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17186 Matrix rotation and translation 
    17187 -0.89084851 -0.21854913 0.39827788 87.09437585 
    17188 -0.02207532 0.89647240 0.44254914 226.33959276 
    17189 -0.45376390 0.38545205 -0.80344571 97.35524450 
    17190 Axis -0.06515974 0.97235826 0.22421780 
    17191 Axis point 56.39712383 0.00000000 10.42213042 
    17192 Rotation angle (degrees) 154.01527070 
    17193 Shift along axis 236.23690420 
    17194  
    17195 
    17196 > fitmap #1.6 inMap #2
    17197 
    17198 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17199 (#2) using 10778 atoms 
    17200 average map value = 0.6904, steps = 44 
    17201 shifted from previous position = 0.0229 
    17202 rotated from previous position = 0.0422 degrees 
    17203 atoms outside contour = 6072, contour level = 0.4 
    17204  
    17205 Position of Kendall.pdb (#1.6) relative to
    17206 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17207 Matrix rotation and translation 
    17208 -0.89068017 -0.21916605 0.39831538 87.08874007 
    17209 -0.02272185 0.89649447 0.44247169 226.31658424 
    17210 -0.45406235 0.38505022 -0.80346977 97.33374806 
    17211 Axis -0.06550443 0.97236301 0.22409674 
    17212 Axis point 56.43850573 0.00000000 10.41457194 
    17213 Rotation angle (degrees) 154.00439593 
    17214 Shift along axis 236.16935256 
    17215  
    17216 
    17217 > fitmap #1.6 inMap #2
    17218 
    17219 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17220 (#2) using 10778 atoms 
    17221 average map value = 0.6904, steps = 52 
    17222 shifted from previous position = 3.06 
    17223 rotated from previous position = 0.0293 degrees 
    17224 atoms outside contour = 6070, contour level = 0.4 
    17225  
    17226 Position of Kendall.pdb (#1.6) relative to
    17227 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17228 Matrix rotation and translation 
    17229 -0.96714169 -0.10724217 0.23051277 68.27453277 
    17230 0.00014136 0.90645355 0.42230529 230.03148137 
    17231 -0.25423807 0.40846156 -0.87665394 123.41193000 
    17232 Axis -0.02787167 0.97595209 0.21619597 
    17233 Axis point 41.91489300 0.00000000 31.36576270 
    17234 Rotation angle (degrees) 165.62024413 
    17235 Shift along axis 249.27794045 
    17236  
    17237 
    17238 > fitmap #1.6 inMap #2
    17239 
    17240 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17241 (#2) using 10778 atoms 
    17242 average map value = 0.6904, steps = 36 
    17243 shifted from previous position = 0.036 
    17244 rotated from previous position = 0.0204 degrees 
    17245 atoms outside contour = 6073, contour level = 0.4 
    17246  
    17247 Position of Kendall.pdb (#1.6) relative to
    17248 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17249 Matrix rotation and translation 
    17250 -0.96710069 -0.10757189 0.23053119 68.25050344 
    17251 -0.00017261 0.90647438 0.42226057 230.00485793 
    17252 -0.25439399 0.40832862 -0.87667063 123.42321022 
    17253 Axis -0.02803935 0.97595723 0.21615107 
    17254 Axis point 41.92585353 0.00000000 31.37694412 
    17255 Rotation angle (degrees) 165.61503834 
    17256 Shift along axis 249.23926261 
    17257  
    17258 
    17259 > ui mousemode right "move picked models"
    17260 
    17261 > view matrix models
    17262 > #2,0.10772,-0.50817,-0.85449,1022.7,0.0025804,0.85963,-0.5109,-384.76,0.99418,0.052831,0.093913,144.2
    17263 
    17264 > view matrix models
    17265 > #1.6,0.2364,-0.81203,0.5336,849.56,0.1579,0.57397,0.80351,-242.47,-0.95874,-0.10569,0.26391,245.61
    17266 
    17267 > fitmap #1.6 inMap #2
    17268 
    17269 Fit molecule Kendall.pdb (#1.6) to map cryosparc_P12_J2773_004_volume_map.mrc
    17270 (#2) using 10778 atoms 
    17271 average map value = 0.6902, steps = 124 
    17272 shifted from previous position = 26.3 
    17273 rotated from previous position = 10.7 degrees 
    17274 atoms outside contour = 6167, contour level = 0.4 
    17275  
    17276 Position of Kendall.pdb (#1.6) relative to
    17277 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17278 Matrix rotation and translation 
    17279 -0.84465104 -0.31070787 0.43591891 72.82528557 
    17280 -0.10190289 0.89275224 0.43887249 230.58054040 
    17281 -0.52552877 0.32627264 -0.78572620 97.24432703 
    17282 Axis -0.11370475 0.97088200 0.21085390 
    17283 Axis point 56.39118668 0.00000000 9.98394091 
    17284 Rotation angle (degrees) 150.32092971 
    17285 Shift along axis 236.09026105 
    17286  
    17287 
    17288 > open
    17289 > /Users/francescappadoo/Downloads/rnacomposer-2024-07-05-171619/RNAFramework.pdb
    17290 
    17291 Chain information for RNAFramework.pdb #4 
    17292 --- 
    17293 Chain | Description 
    17294 A | No description available 
    17295  
    17296 
    17297 > hide #!1 models
    17298 
    17299 > hide #1.6 models
    17300 
    17301 > tile
    17302 
    17303 2 models tiled 
    17304 
    17305 > tile
    17306 
    17307 2 models tiled 
    17308 
    17309 > close #1
    17310 
    17311 > close #3
    17312 
    17313 > select add #4
    17314 
    17315 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17316 
    17317 > select subtract #4
    17318 
    17319 Nothing selected 
    17320 
    17321 > select add #2
    17322 
    17323 2 models selected 
    17324 
    17325 > ui mousemode right "rotate selected models"
    17326 
    17327 > view matrix models
    17328 > #2,0.12374,-0.38118,-0.91618,1007.9,0.32666,0.88746,-0.32512,-488.49,0.937,-0.25905,0.23434,186.13
    17329 
    17330 > select subtract #2
    17331 
    17332 Nothing selected 
    17333 
    17334 > select add #4
    17335 
    17336 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17337 
    17338 > view matrix models
    17339 > #4,-0.75621,-0.38594,0.52839,996.43,-0.57473,0.0057607,-0.81833,-329.27,0.31278,-0.92251,-0.22617,352.6
    17340 
    17341 > view matrix models
    17342 > #4,0.30182,-0.15225,0.94113,998.93,-0.94641,0.07118,0.31502,-316.95,-0.11495,-0.98578,-0.1226,355.94
    17343 
    17344 > view matrix models
    17345 > #4,0.38574,-0.077279,0.91937,998.94,0.83267,-0.39997,-0.38298,-331.5,0.39732,0.91326,-0.089935,366.15
    17346 
    17347 > view matrix models
    17348 > #4,-0.58343,0.12432,-0.8026,987.08,0.36291,-0.84417,-0.39456,-332.43,-0.72657,-0.52147,0.44739,365.96
    17349 
    17350 > view matrix models
    17351 > #4,0.053127,-0.12639,0.99056,1001.5,-0.57323,-0.8161,-0.073384,-326.64,0.81767,-0.56392,-0.11581,355.82
    17352 
    17353 > view matrix models
    17354 > #4,0.56123,-0.020439,0.82741,999.57,-0.81954,0.12599,0.559,-314.45,-0.11567,-0.99182,0.053958,357.73
    17355 
    17356 > select subtract #4
    17357 
    17358 Nothing selected 
    17359 
    17360 > select #4:77-79
    17361 
    17362 97 atoms, 104 bonds, 3 residues, 1 model selected 
    17363 
    17364 > color sel red
    17365 
    17366 > select #4:63-68
    17367 
    17368 189 atoms, 203 bonds, 6 residues, 1 model selected 
    17369 
    17370 > color sel orange
    17371 
    17372 > select up
    17373 
    17374 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17375 
    17376 > select down
    17377 
    17378 189 atoms, 203 bonds, 6 residues, 1 model selected 
    17379 
    17380 > select #4:85-99
    17381 
    17382 481 atoms, 518 bonds, 15 residues, 1 model selected 
    17383 
    17384 > color sel magenta
    17385 
    17386 > select add #4
    17387 
    17388 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17389 
    17390 > select subtract #4
    17391 
    17392 Nothing selected 
    17393 
    17394 > select add #4
    17395 
    17396 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17397 
    17398 > fitmap #4 inMap #2 search 200 resolution 15
    17399 
    17400 Opened RNAFramework.pdb map 15 as #1, grid size 43,37,50, pixel 5, shown at
    17401 level 0.0376, step 1, values float32 
    17402 Found 52 unique fits from 200 random placements having fraction of points
    17403 inside contour >= 0.100 (199 of 200). 
    17404  
    17405 Correlations and times found: 
    17406 0.5906 (26), 0.5732 (22), 0.5457 (5), 0.54 (23), 0.5399 (20), 0.5393 (9),
    17407 0.5316 (4), 0.519 (8), 0.518 (7), 0.5165 (6), 0.511 (5), 0.5091 (3), 0.5041
    17408 (4), 0.5019 (1), 0.4949 (3), 0.4945 (1), 0.4901 (2), 0.4892 (3), 0.4882 (4),
    17409 0.4836 (3), 0.4726 (1), 0.4676 (1), 0.467 (1), 0.4614 (1), 0.4518 (1), 0.447
    17410 (2), 0.4439 (1), 0.4437 (1), 0.4378 (3), 0.4364 (1), 0.4357 (1), 0.4331 (1),
    17411 0.4259 (1), 0.4253 (2), 0.4245 (2), 0.4245 (1), 0.4232 (2), 0.4227 (2), 0.4189
    17412 (2), 0.4187 (1), 0.4166 (1), 0.416 (1), 0.4155 (1), 0.4111 (1), 0.4067 (1),
    17413 0.4006 (1), 0.3973 (1), 0.3874 (1), 0.3822 (1), 0.3625 (1), 0.3084 (1), 0.2942
    17414 (1) 
    17415  
    17416 Best fit found: 
    17417 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17418 using 2353 points 
    17419 correlation = 0.5906, correlation about mean = 0.3429, overlap = 279.2 
    17420 steps = 260, shift = 48.2, angle = 75.3 degrees 
    17421 Position of RNAFramework.pdb map 15 (#1) relative to
    17422 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17423 Matrix rotation and translation 
    17424 0.49213241 0.86363041 -0.10930741 190.58545824 
    17425 0.67214664 -0.45677203 -0.58273338 199.08721773 
    17426 -0.55319484 0.21331138 -0.80527862 184.27189919 
    17427 Axis 0.85473295 0.47661291 -0.20560086 
    17428 Axis point 0.00000000 13.24287442 128.68292438 
    17429 Rotation angle (degrees) 152.24649187 
    17430 Shift along axis 219.90074873 
    17431  
    17432 Found 52 fits. 
    17433 
    17434 > transparency #2.1 0
    17435 
    17436 > transparency #2.1 50
    17437 
    17438 > view matrix models
    17439 > #4,0.12829,-0.16813,0.97738,785.79,0.92169,-0.34359,-0.18009,-309.29,0.36609,0.92395,0.11088,358.09
    17440 
    17441 > fitmap #4 inMap #2 resolution 15 metric correlation
    17442 
    17443 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17444 using 2353 points 
    17445 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17446 steps = 104, shift = 0.932, angle = 20 degrees 
    17447  
    17448 Position of RNAFramework.pdb map 15 (#1) relative to
    17449 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17450 Matrix rotation and translation 
    17451 0.49557426 0.86141054 -0.11125620 190.63323180 
    17452 0.67123949 -0.46112305 -0.58034737 199.42361981 
    17453 -0.55122014 0.21292567 -0.80673351 184.20431058 
    17454 Axis 0.85589840 0.47469713 -0.20518420 
    17455 Axis point 0.00000000 13.92851405 128.58413978 
    17456 Rotation angle (degrees) 152.39228070 
    17457 Shift along axis 220.03268383 
    17458  
    17459 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    17460 
    17461 > select subtract #4
    17462 
    17463 Nothing selected 
    17464 
    17465 > fitmap #4 inMap #2 resolution 15 metric correlation
    17466 
    17467 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17468 using 2353 points 
    17469 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    17470 steps = 28, shift = 0.551, angle = 0.629 degrees 
    17471  
    17472 Position of RNAFramework.pdb map 15 (#1) relative to
    17473 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17474 Matrix rotation and translation 
    17475 -0.53426205 -0.83762965 -0.11375657 193.08692207 
    17476 -0.83144311 0.54499509 -0.10808656 181.36923804 
    17477 0.15253328 0.03683557 -0.98761162 190.53399704 
    17478 Axis 0.47792145 -0.87816562 0.02040186 
    17479 Axis point 137.56875120 -0.00000000 107.06580801 
    17480 Rotation angle (degrees) 171.27934831 
    17481 Shift along axis -63.10459932 
    17482  
    17483 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    17484 
    17485 > fitmap #4 inMap #2 resolution 15 metric correlation
    17486 
    17487 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17488 using 2353 points 
    17489 correlation = 0.5738, correlation about mean = 0.338, overlap = 267.9 
    17490 steps = 44, shift = 1.2, angle = 1.07 degrees 
    17491  
    17492 Position of RNAFramework.pdb map 15 (#1) relative to
    17493 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17494 Matrix rotation and translation 
    17495 -0.49204553 -0.84747270 0.19920129 185.91600738 
    17496 -0.72036694 0.52483354 0.45345478 169.57192192 
    17497 -0.48883807 0.07962238 -0.86873332 188.84320536 
    17498 Axis -0.47124467 0.86732686 0.16022665 
    17499 Axis point 159.82460844 -0.00000000 51.55326710 
    17500 Rotation angle (degrees) 156.63147660 
    17501 Shift along axis 89.72006820 
    17502  
    17503 Average map value = 0.6535 for 10778 atoms, 6448 outside contour 
    17504 
    17505 > fitmap #4 inMap #2 resolution 15 metric correlation
    17506 
    17507 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17508 using 2353 points 
    17509 correlation = 0.4974, correlation about mean = 0.2314, overlap = 216.8 
    17510 steps = 112, shift = 7.66, angle = 14.8 degrees 
    17511  
    17512 Position of RNAFramework.pdb map 15 (#1) relative to
    17513 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17514 Matrix rotation and translation 
    17515 -0.34286674 -0.90684473 -0.24510197 188.65608064 
    17516 -0.90808775 0.25317536 0.33358488 199.36691872 
    17517 -0.24045591 0.33694926 -0.91030001 188.27787194 
    17518 Axis 0.57320547 -0.79157138 -0.21177876 
    17519 Axis point 166.35550900 0.00000000 67.69183606 
    17520 Rotation angle (degrees) 179.83185341 
    17521 Shift along axis -89.54770295 
    17522  
    17523 Average map value = 0.5351 for 10778 atoms, 7329 outside contour 
    17524 
    17525 > fitmap #4 inMap #2 resolution 15 metric correlation
    17526 
    17527 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17528 using 2353 points 
    17529 correlation = 0.4974, correlation about mean = 0.2314, overlap = 216.8 
    17530 steps = 28, shift = 0.0316, angle = 0.0581 degrees 
    17531  
    17532 Position of RNAFramework.pdb map 15 (#1) relative to
    17533 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17534 Matrix rotation and translation 
    17535 -0.34379833 -0.90656923 -0.24481603 188.68199209 
    17536 -0.90774951 0.25410462 0.33379884 199.36857661 
    17537 -0.24040287 0.33699112 -0.91029853 188.28022119 
    17538 Axis 0.57279911 -0.79186480 -0.21178128 
    17539 Axis point 166.29915979 0.00000000 67.69110009 
    17540 Rotation angle (degrees) 179.84034148 
    17541 Shift along axis -89.67030781 
    17542  
    17543 Average map value = 0.535 for 10778 atoms, 7329 outside contour 
    17544 
    17545 > select down
    17546 
    17547 Nothing selected 
    17548 
    17549 > fitmap #4 inMap #2 resolution 15 metric correlation
    17550 
    17551 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17552 using 2353 points 
    17553 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17554 steps = 48, shift = 0.333, angle = 0.291 degrees 
    17555  
    17556 Position of RNAFramework.pdb map 15 (#1) relative to
    17557 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17558 Matrix rotation and translation 
    17559 0.49553092 0.86143122 -0.11128898 190.63835765 
    17560 0.67124110 -0.46110299 -0.58036137 199.42077113 
    17561 -0.55125712 0.21288527 -0.80671885 184.20461135 
    17562 Axis 0.85588534 0.47471020 -0.20520847 
    17563 Axis point 0.00000000 13.92280110 128.58716013 
    17564 Rotation angle (degrees) 152.39281897 
    17565 Shift along axis 220.03130279 
    17566  
    17567 Average map value = 0.6806 for 10778 atoms, 6423 outside contour 
    17568 
    17569 > fitmap #4 inMap #2 resolution 15 metric correlation
    17570 
    17571 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17572 using 2353 points 
    17573 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17574 steps = 40, shift = 0.00963, angle = 0.0234 degrees 
    17575  
    17576 Position of RNAFramework.pdb map 15 (#1) relative to
    17577 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17578 Matrix rotation and translation 
    17579 0.49553486 0.86148049 -0.11088932 190.62978591 
    17580 0.67132597 -0.46087039 -0.58044796 199.42052790 
    17581 -0.55115022 0.21318932 -0.80671160 184.20192908 
    17582 Axis 0.85587646 0.47478736 -0.20506695 
    17583 Axis point 0.00000000 13.90078186 128.57243195 
    17584 Rotation angle (degrees) 152.37775179 
    17585 Shift along axis 220.06416257 
    17586  
    17587 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    17588 
    17589 > fitmap #4 inMap #2 resolution 15 metric correlation
    17590 
    17591 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17592 using 2353 points 
    17593 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17594 steps = 40, shift = 0.0419, angle = 0.0288 degrees 
    17595  
    17596 Position of RNAFramework.pdb map 15 (#1) relative to
    17597 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17598 Matrix rotation and translation 
    17599 0.49549535 0.86156528 -0.11040608 190.59061958 
    17600 0.67143927 -0.46054968 -0.58057145 199.43104294 
    17601 -0.55104772 0.21353949 -0.80668901 184.19384516 
    17602 Axis 0.85585163 0.47490074 -0.20490797 
    17603 Axis point 0.00000000 13.88411558 128.55322522 
    17604 Rotation angle (degrees) 152.35898627 
    17605 Shift along axis 220.08445578 
    17606  
    17607 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    17608 
    17609 > fitmap #4 inMap #2 resolution 15 metric correlation
    17610 
    17611 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17612 using 2353 points 
    17613 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17614 steps = 40, shift = 0.014, angle = 0.00719 degrees 
    17615  
    17616 Position of RNAFramework.pdb map 15 (#1) relative to
    17617 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17618 Matrix rotation and translation 
    17619 0.49545178 0.86160441 -0.11029614 190.57719486 
    17620 0.67148558 -0.46045057 -0.58059650 199.43485872 
    17621 -0.55103046 0.21359531 -0.80668602 184.19167084 
    17622 Axis 0.85583571 0.47494341 -0.20487555 
    17623 Axis point 0.00000000 13.88019202 128.54850217 
    17624 Rotation angle (degrees) 152.35537229 
    17625 Shift along axis 220.08667083 
    17626  
    17627 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    17628 
    17629 > fitmap #4 inMap #2 resolution 15 metric correlation
    17630 
    17631 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17632 using 2353 points 
    17633 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17634 steps = 40, shift = 0.0535, angle = 0.0421 degrees 
    17635  
    17636 Position of RNAFramework.pdb map 15 (#1) relative to
    17637 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17638 Matrix rotation and translation 
    17639 0.49546873 0.86150261 -0.11101290 190.62679580 
    17640 0.67131748 -0.46088518 -0.58044604 199.42162855 
    17641 -0.55122001 0.21306797 -0.80669598 184.20180954 
    17642 Axis 0.85585868 0.47479322 -0.20512756 
    17643 Axis point 0.00000000 13.90328353 128.57847260 
    17644 Rotation angle (degrees) 152.38178627 
    17645 Shift along axis 220.04876751 
    17646  
    17647 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    17648 
    17649 > fitmap #4 inMap #2 resolution 15 metric correlation
    17650 
    17651 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17652 using 2353 points 
    17653 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17654 steps = 28, shift = 0.0762, angle = 0.0689 degrees 
    17655  
    17656 Position of RNAFramework.pdb map 15 (#1) relative to
    17657 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17658 Matrix rotation and translation 
    17659 0.49534576 0.86172095 -0.10986104 190.55214102 
    17660 0.67160685 -0.46009980 -0.58073430 199.42311964 
    17661 -0.55097799 0.21388085 -0.80664620 184.19292189 
    17662 Axis 0.85579107 0.47507771 -0.20475063 
    17663 Axis point 0.00000000 13.84343076 128.53623951 
    17664 Rotation angle (degrees) 152.33780763 
    17665 Shift along axis 220.10068117 
    17666  
    17667 Average map value = 0.6806 for 10778 atoms, 6417 outside contour 
    17668 
    17669 > fitmap #4 inMap #2 resolution 15 metric correlation
    17670 
    17671 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17672 using 2353 points 
    17673 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17674 steps = 28, shift = 0.109, angle = 0.112 degrees 
    17675  
    17676 Position of RNAFramework.pdb map 15 (#1) relative to
    17677 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17678 Matrix rotation and translation 
    17679 0.49567425 0.86129481 -0.11170565 190.65987195 
    17680 0.67107783 -0.46146200 -0.58026483 199.41939503 
    17681 -0.55132703 0.21265915 -0.80673071 184.20516521 
    17682 Axis 0.85593915 0.47455892 -0.20533388 
    17683 Axis point 0.00000000 13.95254198 128.60077126 
    17684 Rotation angle (degrees) 152.40688881 
    17685 Shift along axis 220.00593978 
    17686  
    17687 Average map value = 0.6806 for 10778 atoms, 6424 outside contour 
    17688 
    17689 > fitmap #4 inMap #2 resolution 15 metric correlation
    17690 
    17691 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17692 using 2353 points 
    17693 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17694 steps = 28, shift = 0.0802, angle = 0.0597 degrees 
    17695  
    17696 Position of RNAFramework.pdb map 15 (#1) relative to
    17697 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17698 Matrix rotation and translation 
    17699 0.49556897 0.86148531 -0.11069931 190.58354008 
    17700 0.67135683 -0.46078795 -0.58047771 199.43696108 
    17701 -0.55108196 0.21334801 -0.80671628 184.19388792 
    17702 Axis 0.85588239 0.47480920 -0.20499161 
    17703 Axis point 0.00000000 13.91527365 128.56018150 
    17704 Rotation angle (degrees) 152.37084044 
    17705 Shift along axis 220.05339747 
    17706  
    17707 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    17708 
    17709 > fitmap #4 inMap #2 resolution 15 metric correlation
    17710 
    17711 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17712 using 2353 points 
    17713 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17714 steps = 40, shift = 0.0455, angle = 0.0116 degrees 
    17715  
    17716 Position of RNAFramework.pdb map 15 (#1) relative to
    17717 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17718 Matrix rotation and translation 
    17719 0.49545507 0.86153019 -0.11085972 190.62456514 
    17720 0.67135360 -0.46078246 -0.58048581 199.42112704 
    17721 -0.55118830 0.21317857 -0.80668843 184.20054765 
    17722 Axis 0.85585045 0.47482968 -0.20507752 
    17723 Axis point 0.00000000 13.89274324 128.57330307 
    17724 Rotation angle (degrees) 152.37581680 
    17725 Shift along axis 220.06179864 
    17726  
    17727 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    17728 
    17729 > fitmap #4 inMap #2
    17730 
    17731 Fit molecule RNAFramework.pdb (#4) to map
    17732 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17733 average map value = 0.6819, steps = 44 
    17734 shifted from previous position = 1.51 
    17735 rotated from previous position = 1.92 degrees 
    17736 atoms outside contour = 6485, contour level = 0.4 
    17737  
    17738 Position of RNAFramework.pdb (#4) relative to
    17739 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17740 Matrix rotation and translation 
    17741 0.47586908 0.87302436 -0.10666280 190.17563639 
    17742 0.66779240 -0.43756952 -0.60215126 197.97097538 
    17743 -0.57236514 0.21531657 -0.79122486 183.48589131 
    17744 Axis 0.84892958 0.48362576 -0.21313070 
    17745 Axis point 0.00000000 10.06209800 129.59434995 
    17746 Rotation angle (degrees) 151.21856064 
    17747 Shift along axis 218.08311035 
    17748  
    17749 
    17750 > fitmap #4 inMap #2
    17751 
    17752 Fit molecule RNAFramework.pdb (#4) to map
    17753 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17754 average map value = 0.6819, steps = 40 
    17755 shifted from previous position = 0.0508 
    17756 rotated from previous position = 0.0232 degrees 
    17757 atoms outside contour = 6490, contour level = 0.4 
    17758  
    17759 Position of RNAFramework.pdb (#4) relative to
    17760 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17761 Matrix rotation and translation 
    17762 0.47582375 0.87300002 -0.10706355 190.22429268 
    17763 0.66768352 -0.43776179 -0.60213224 197.96036903 
    17764 -0.57252982 0.21502426 -0.79118520 183.49280551 
    17765 Axis 0.84892403 0.48356160 -0.21329832 
    17766 Axis point 0.00000000 10.05813235 129.61820123 
    17767 Rotation angle (degrees) 151.23034090 
    17768 Shift along axis 218.07329870 
    17769  
    17770 
    17771 > fitmap #4 inMap #2
    17772 
    17773 Fit molecule RNAFramework.pdb (#4) to map
    17774 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17775 average map value = 0.6819, steps = 40 
    17776 shifted from previous position = 0.0477 
    17777 rotated from previous position = 0.0405 degrees 
    17778 atoms outside contour = 6485, contour level = 0.4 
    17779  
    17780 Position of RNAFramework.pdb (#4) relative to
    17781 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17782 Matrix rotation and translation 
    17783 0.47580870 0.87309067 -0.10638904 190.17777960 
    17784 0.66779334 -0.43732346 -0.60232894 197.96334675 
    17785 -0.57241423 0.21554746 -0.79112647 183.48337172 
    17786 Axis 0.84889817 0.48370137 -0.21308419 
    17787 Axis point 0.00000000 10.02601695 129.59328148 
    17788 Rotation angle (degrees) 151.20166306 
    17789 Shift along axis 218.09930669 
    17790  
    17791 
    17792 > select add #4
    17793 
    17794 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    17795 
    17796 > view matrix models
    17797 > #4,0.27513,-0.45003,0.84958,783.87,-0.64636,-0.74074,-0.18306,-308.72,0.7117,-0.49877,-0.49468,341.97
    17798 
    17799 > view matrix models
    17800 > #4,0.069475,-0.55896,0.82628,783.57,-0.99741,-0.023377,0.06805,-301.1,-0.018721,-0.82886,-0.55914,341.36
    17801 
    17802 > fitmap #4 inMap #2
    17803 
    17804 Fit molecule RNAFramework.pdb (#4) to map
    17805 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17806 average map value = 0.4604, steps = 244 
    17807 shifted from previous position = 20.6 
    17808 rotated from previous position = 28.4 degrees 
    17809 atoms outside contour = 7943, contour level = 0.4 
    17810  
    17811 Position of RNAFramework.pdb (#4) relative to
    17812 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17813 Matrix rotation and translation 
    17814 -0.36836019 -0.75755814 -0.53890285 196.52744721 
    17815 -0.64523251 0.62564526 -0.43845510 221.62295699 
    17816 0.66931734 0.18620824 -0.71926401 181.30282136 
    17817 Axis 0.45770347 -0.88528736 0.08230326 
    17818 Axis point 113.51383133 0.00000000 154.01711846 
    17819 Rotation angle (degrees) 136.96941067 
    17820 Shift along axis -91.32689531 
    17821  
    17822 
    17823 > undo
    17824 
    17825 > ui mousemode right "translate selected models"
    17826 
    17827 > view matrix models
    17828 > #4,0.27513,-0.45003,0.84958,793.85,-0.64636,-0.74074,-0.18306,-328.56,0.7117,-0.49877,-0.49468,343.72
    17829 
    17830 > fitmap #4 inMap #2
    17831 
    17832 Fit molecule RNAFramework.pdb (#4) to map
    17833 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17834 average map value = 0.5555, steps = 136 
    17835 shifted from previous position = 20.7 
    17836 rotated from previous position = 41.2 degrees 
    17837 atoms outside contour = 7364, contour level = 0.4 
    17838  
    17839 Position of RNAFramework.pdb (#4) relative to
    17840 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17841 Matrix rotation and translation 
    17842 -0.04637256 -0.93570188 -0.34973049 185.21851231 
    17843 -0.96501570 -0.04848232 0.25767054 196.48875379 
    17844 -0.25805855 0.34944427 -0.90071879 181.80449057 
    17845 Axis 0.69009704 -0.68933168 -0.22042665 
    17846 Axis point 0.00000000 186.62025567 124.42832236 
    17847 Rotation angle (degrees) 176.18739841 
    17848 Shift along axis -47.70173156 
    17849  
    17850 
    17851 > view matrix models
    17852 > #4,0.59854,-0.41746,0.68372,806.55,-0.78766,-0.4623,0.40727,-318.8,0.14607,-0.78231,-0.60552,347.56
    17853 
    17854 > fitmap #4 inMap #2
    17855 
    17856 Fit molecule RNAFramework.pdb (#4) to map
    17857 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17858 average map value = 0.5555, steps = 80 
    17859 shifted from previous position = 18.7 
    17860 rotated from previous position = 0.082 degrees 
    17861 atoms outside contour = 7360, contour level = 0.4 
    17862  
    17863 Position of RNAFramework.pdb (#4) relative to
    17864 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17865 Matrix rotation and translation 
    17866 -0.04770402 -0.93582291 -0.34922721 185.20943775 
    17867 -0.96492780 -0.04718166 0.25824052 196.50843285 
    17868 -0.25814451 0.34929817 -0.90075083 181.81681679 
    17869 Axis 0.68961997 -0.68980973 -0.22042422 
    17870 Axis point 186.72977148 0.00000000 64.73958526 
    17871 Rotation angle (degrees) 176.21456982 
    17872 Shift along axis -47.90613196 
    17873  
    17874 
    17875 > fitmap #4 inMap #2
    17876 
    17877 Fit molecule RNAFramework.pdb (#4) to map
    17878 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17879 average map value = 0.5554, steps = 40 
    17880 shifted from previous position = 0.0424 
    17881 rotated from previous position = 0.0513 degrees 
    17882 atoms outside contour = 7360, contour level = 0.4 
    17883  
    17884 Position of RNAFramework.pdb (#4) relative to
    17885 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17886 Matrix rotation and translation 
    17887 -0.04858968 -0.93579628 -0.34917648 185.24605231 
    17888 -0.96491817 -0.04632738 0.25843109 196.51206614 
    17889 -0.25801528 0.34948383 -0.90071584 181.82216209 
    17890 Axis 0.68929813 -0.69011926 -0.22046200 
    17891 Axis point 186.66063176 0.00000000 64.75245261 
    17892 Rotation angle (degrees) 176.21300438 
    17893 Shift along axis -48.01188158 
    17894  
    17895 
    17896 > fitmap #4 inMap #2
    17897 
    17898 Fit molecule RNAFramework.pdb (#4) to map
    17899 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17900 average map value = 0.5555, steps = 28 
    17901 shifted from previous position = 0.0671 
    17902 rotated from previous position = 0.0638 degrees 
    17903 atoms outside contour = 7358, contour level = 0.4 
    17904  
    17905 Position of RNAFramework.pdb (#4) relative to
    17906 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17907 Matrix rotation and translation 
    17908 -0.04749141 -0.93578938 -0.34934603 185.18720167 
    17909 -0.96498546 -0.04734108 0.25799579 196.50373294 
    17910 -0.25796813 0.34936644 -0.90077488 181.83598705 
    17911 Axis 0.68969435 -0.68974911 -0.22038117 
    17912 Axis point 186.72088124 0.00000000 64.77046441 
    17913 Rotation angle (degrees) 176.20194886 
    17914 Shift along axis -47.88893610 
    17915  
    17916 
    17917 > view matrix models
    17918 > #4,0.59831,-0.41783,0.6837,790.24,-0.78803,-0.46129,0.4077,-319.17,0.14503,-0.78271,-0.60526,352.64
    17919 
    17920 > fitmap #4 inMap #2
    17921 
    17922 Fit molecule RNAFramework.pdb (#4) to map
    17923 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    17924 average map value = 0.5554, steps = 56 
    17925 shifted from previous position = 6.67 
    17926 rotated from previous position = 0.151 degrees 
    17927 atoms outside contour = 7354, contour level = 0.4 
    17928  
    17929 Position of RNAFramework.pdb (#4) relative to
    17930 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17931 Matrix rotation and translation 
    17932 -0.05001978 -0.93592005 -0.34864242 185.22657624 
    17933 -0.96488193 -0.04484877 0.25882692 196.52775971 
    17934 -0.25787748 0.34934524 -0.90080906 181.85105838 
    17935 Axis 0.68878296 -0.69065951 -0.22038030 
    17936 Axis point 186.53328180 0.00000000 64.77215039 
    17937 Rotation angle (degrees) 176.23244346 
    17938 Shift along axis -48.22924819 
    17939  
    17940 
    17941 > color zone #2 near sel & #4 distance 17.8
    17942 
    17943 [Repeated 1 time(s)]
    17944 
    17945 > undo
    17946 
    17947 [Repeated 1 time(s)]
    17948 
    17949 > fitmap #4 inMap #2 resolution 15 metric correlation
    17950 
    17951 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17952 using 2353 points 
    17953 correlation = 0.4974, correlation about mean = 0.2314, overlap = 216.8 
    17954 steps = 148, shift = 8.67, angle = 18.1 degrees 
    17955  
    17956 Position of RNAFramework.pdb map 15 (#1) relative to
    17957 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17958 Matrix rotation and translation 
    17959 -0.34393603 -0.90655616 -0.24467078 188.67238303 
    17960 -0.90774593 0.25434515 0.33362524 199.36333650 
    17961 -0.24021918 0.33684466 -0.91040116 188.29519713 
    17962 Axis 0.57273620 -0.79194246 -0.21166101 
    17963 Axis point 166.27618169 0.00000000 67.71883032 
    17964 Rotation angle (degrees) 179.83896641 
    17965 Shift along axis -89.67953968 
    17966  
    17967 Average map value = 0.535 for 10778 atoms, 7329 outside contour 
    17968 
    17969 > fitmap #4 inMap #2 resolution 15 metric correlation
    17970 
    17971 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17972 using 2353 points 
    17973 correlation = 0.4974, correlation about mean = 0.2313, overlap = 216.8 
    17974 steps = 28, shift = 0.0238, angle = 0.0215 degrees 
    17975  
    17976 Position of RNAFramework.pdb map 15 (#1) relative to
    17977 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17978 Matrix rotation and translation 
    17979 -0.34426821 -0.90643838 -0.24463998 188.69288803 
    17980 -0.90759804 0.25461249 0.33382360 199.36744339 
    17981 -0.24030212 0.33695963 -0.91033673 188.28841523 
    17982 Axis 0.57259115 -0.79202689 -0.21173751 
    17983 Axis point 166.26586958 0.00000000 67.70264612 
    17984 Rotation angle (degrees) 179.84309803 
    17985 Shift along axis -89.72821911 
    17986  
    17987 Average map value = 0.535 for 10778 atoms, 7329 outside contour 
    17988 
    17989 > fitmap #4 inMap #2 resolution 15 metric correlation
    17990 
    17991 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    17992 using 2353 points 
    17993 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    17994 steps = 60, shift = 0.349, angle = 0.283 degrees 
    17995  
    17996 Position of RNAFramework.pdb map 15 (#1) relative to
    17997 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    17998 Matrix rotation and translation 
    17999 0.49558516 0.86145384 -0.11087150 190.59013794 
    18000 0.67132419 -0.46090734 -0.58042069 199.43649211 
    18001 -0.55110715 0.21321717 -0.80673366 184.19599250 
    18002 Axis 0.85589240 0.47476862 -0.20504379 
    18003 Axis point 0.00000000 13.92633107 128.56553524 
    18004 Rotation angle (degrees) 152.37828891 
    18005 Shift along axis 220.04259402 
    18006  
    18007 Average map value = 0.6806 for 10778 atoms, 6423 outside contour 
    18008 
    18009 > fitmap #4 inMap #2 resolution 15 metric correlation
    18010 
    18011 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18012 using 2353 points 
    18013 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18014 steps = 40, shift = 0.00537, angle = 0.0081 degrees 
    18015  
    18016 Position of RNAFramework.pdb map 15 (#1) relative to
    18017 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18018 Matrix rotation and translation 
    18019 0.49552837 0.86149756 -0.11078552 190.58486397 
    18020 0.67133016 -0.46079571 -0.58050242 199.43564268 
    18021 -0.55115095 0.21328177 -0.80668667 184.19375225 
    18022 Axis 0.85587059 0.47480893 -0.20504148 
    18023 Axis point 0.00000000 13.91329361 128.56630028 
    18024 Rotation angle (degrees) 152.37199671 
    18025 Shift along axis 220.04244401 
    18026  
    18027 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18028 
    18029 > fitmap #4 inMap #2 resolution 15 metric correlation
    18030 
    18031 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18032 using 2353 points 
    18033 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18034 steps = 40, shift = 0.0431, angle = 0.00948 degrees 
    18035  
    18036 Position of RNAFramework.pdb map 15 (#1) relative to
    18037 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18038 Matrix rotation and translation 
    18039 0.49542519 0.86157030 -0.11068128 190.62385985 
    18040 0.67139776 -0.46064986 -0.58053998 199.41954140 
    18041 -0.55116136 0.21330298 -0.80667394 184.19980846 
    18042 Axis 0.85583633 0.47487838 -0.20502364 
    18043 Axis point 0.00000000 13.87767474 128.56832526 
    18044 Rotation angle (degrees) 152.36857541 
    18045 Shift along axis 220.07753973 
    18046  
    18047 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18048 
    18049 > fitmap #4 inMap #2 resolution 15 metric correlation
    18050 
    18051 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18052 using 2353 points 
    18053 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18054 steps = 40, shift = 0.0374, angle = 0.0097 degrees 
    18055  
    18056 Position of RNAFramework.pdb map 15 (#1) relative to
    18057 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18058 Matrix rotation and translation 
    18059 0.49552885 0.86152680 -0.11055578 190.59024981 
    18060 0.67139852 -0.46066784 -0.58052484 199.43283617 
    18061 -0.55106724 0.21343983 -0.80670205 184.19438913 
    18062 Axis 0.85586606 0.47485590 -0.20495161 
    18063 Axis point 0.00000000 13.89798089 128.55722030 
    18064 Rotation angle (degrees) 152.36501894 
    18065 Shift along axis 220.07064730 
    18066  
    18067 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18068 
    18069 > fitmap #4 inMap #2 resolution 15 metric correlation
    18070 
    18071 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18072 using 2353 points 
    18073 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18074 steps = 40, shift = 0.0068, angle = 0.0108 degrees 
    18075  
    18076 Position of RNAFramework.pdb map 15 (#1) relative to
    18077 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18078 Matrix rotation and translation 
    18079 0.49554478 0.86149528 -0.11072989 190.58424719 
    18080 0.67136928 -0.46078955 -0.58046207 199.43661613 
    18081 -0.55108854 0.21330432 -0.80672334 184.19501269 
    18082 Axis 0.85587626 0.47481542 -0.20500280 
    18083 Axis point 0.00000000 13.91564855 128.56116956 
    18084 Rotation angle (degrees) 152.37286788 
    18085 Shift along axis 220.05161994 
    18086  
    18087 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18088 
    18089 > fitmap #4 inMap #2 resolution 15 metric correlation
    18090 
    18091 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18092 using 2353 points 
    18093 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18094 steps = 40, shift = 0.0528, angle = 0.0312 degrees 
    18095  
    18096 Position of RNAFramework.pdb map 15 (#1) relative to
    18097 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18098 Matrix rotation and translation 
    18099 0.49556660 0.86141412 -0.11126235 190.63373579 
    18100 0.67122934 -0.46111571 -0.58036488 199.42269787 
    18101 -0.55123935 0.21292691 -0.80672000 184.20285002 
    18102 Axis 0.85589549 0.47469839 -0.20519346 
    18103 Axis point 0.00000000 13.92644293 128.58498649 
    18104 Rotation angle (degrees) 152.39146938 
    18105 Shift along axis 220.03096705 
    18106  
    18107 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18108 
    18109 > fitmap #4 inMap #2 resolution 15 metric correlation
    18110 
    18111 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18112 using 2353 points 
    18113 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18114 steps = 40, shift = 0.0114, angle = 0.0141 degrees 
    18115  
    18116 Position of RNAFramework.pdb map 15 (#1) relative to
    18117 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18118 Matrix rotation and translation 
    18119 0.49557856 0.86143848 -0.11102024 190.63661306 
    18120 0.67127831 -0.46098330 -0.58041343 199.42886345 
    18121 -0.55116897 0.21311499 -0.80671843 184.19362245 
    18122 Axis 0.85589315 0.47474076 -0.20510517 
    18123 Axis point 0.00000000 13.91577542 128.57301191 
    18124 Rotation angle (degrees) 152.38244930 
    18125 Shift along axis 220.06251677 
    18126  
    18127 Average map value = 0.6806 for 10778 atoms, 6423 outside contour 
    18128 
    18129 > fitmap #4 inMap #2 resolution 15 metric correlation
    18130 
    18131 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18132 using 2353 points 
    18133 correlation = 0.5907, correlation about mean = 0.3439, overlap = 279.1 
    18134 steps = 48, shift = 0.0603, angle = 0.0235 degrees 
    18135  
    18136 Position of RNAFramework.pdb map 15 (#1) relative to
    18137 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18138 Matrix rotation and translation 
    18139 0.49554726 0.86150781 -0.11062121 190.57757351 
    18140 0.67138495 -0.46072483 -0.58049531 199.43861089 
    18141 -0.55106722 0.21339346 -0.80671433 184.19301001 
    18142 Axis 0.85587387 0.47483508 -0.20496724 
    18143 Axis point 0.00000000 13.91147790 128.55720789 
    18144 Rotation angle (degrees) 152.36816021 
    18145 Shift along axis 220.05727987 
    18146  
    18147 Average map value = 0.6806 for 10778 atoms, 6419 outside contour 
    18148 
    18149 > fitmap #4 inMap #2 resolution 15 metric correlation
    18150 
    18151 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18152 using 2353 points 
    18153 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18154 steps = 40, shift = 0.059, angle = 0.0293 degrees 
    18155  
    18156 Position of RNAFramework.pdb map 15 (#1) relative to
    18157 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18158 Matrix rotation and translation 
    18159 0.49549762 0.86147130 -0.11112678 190.63201885 
    18160 0.67127326 -0.46097332 -0.58042720 199.42114262 
    18161 -0.55124789 0.21300388 -0.80669385 184.20152913 
    18162 Axis 0.85587000 0.47475637 -0.20516564 
    18163 Axis point 0.00000000 13.91027675 128.58253881 
    18164 Rotation angle (degrees) 152.38531551 
    18165 Shift along axis 220.04085834 
    18166  
    18167 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18168 
    18169 > fitmap #4 inMap #2 resolution 15 metric correlation
    18170 
    18171 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18172 using 2353 points 
    18173 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18174 steps = 40, shift = 0.00144, angle = 0.00577 degrees 
    18175  
    18176 Position of RNAFramework.pdb map 15 (#1) relative to
    18177 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18178 Matrix rotation and translation 
    18179 0.49557045 0.86143653 -0.11107151 190.63163152 
    18180 0.67127030 -0.46100675 -0.58040407 199.42225663 
    18181 -0.55118602 0.21307211 -0.80671811 184.20186549 
    18182 Axis 0.85589193 0.47473443 -0.20512493 
    18183 Axis point 0.00000000 13.91544196 128.57801862 
    18184 Rotation angle (degrees) 152.38437993 
    18185 Shift along axis 220.04829099 
    18186  
    18187 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18188 
    18189 > fitmap #4 inMap #2 resolution 15 metric correlation
    18190 
    18191 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18192 using 2353 points 
    18193 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18194 steps = 40, shift = 0.0026, angle = 0.0122 degrees 
    18195  
    18196 Position of RNAFramework.pdb map 15 (#1) relative to
    18197 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18198 Matrix rotation and translation 
    18199 0.49558093 0.86140413 -0.11127585 190.63339004 
    18200 0.67122673 -0.46113792 -0.58035026 199.42333275 
    18201 -0.55122967 0.21291921 -0.80672866 184.20336181 
    18202 Axis 0.85590061 0.47468956 -0.20519252 
    18203 Axis point 0.00000000 13.92959722 128.58477055 
    18204 Rotation angle (degrees) 152.39249195 
    18205 Shift along axis 220.03025798 
    18206  
    18207 Average map value = 0.6806 for 10778 atoms, 6423 outside contour 
    18208 
    18209 > fitmap #4 inMap #2 resolution 15 metric correlation
    18210 
    18211 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18212 using 2353 points 
    18213 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18214 steps = 40, shift = 0.0467, angle = 0.0353 degrees 
    18215  
    18216 Position of RNAFramework.pdb map 15 (#1) relative to
    18217 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18218 Matrix rotation and translation 
    18219 0.49556808 0.86148933 -0.11067191 190.58982569 
    18220 0.67137590 -0.46077603 -0.58046514 199.43509763 
    18221 -0.55105953 0.21335755 -0.80672908 184.19585482 
    18222 Axis 0.85588219 0.47481625 -0.20497612 
    18223 Axis point 0.00000000 13.91188920 128.55908864 
    18224 Rotation angle (degrees) 152.37094826 
    18225 Shift along axis 220.06171027 
    18226  
    18227 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18228 
    18229 > fitmap #4 inMap #2 resolution 15 metric correlation
    18230 
    18231 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18232 using 2353 points 
    18233 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18234 steps = 40, shift = 0.00962, angle = 0.0192 degrees 
    18235  
    18236 Position of RNAFramework.pdb map 15 (#1) relative to
    18237 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18238 Matrix rotation and translation 
    18239 0.49548048 0.86157766 -0.11037611 190.58054491 
    18240 0.67145695 -0.46052169 -0.58057321 199.43424366 
    18241 -0.55103954 0.21354991 -0.80669184 184.19259068 
    18242 Axis 0.85584660 0.47491414 -0.20489790 
    18243 Axis point 0.00000000 13.88631999 128.55107147 
    18244 Rotation angle (degrees) 152.35835002 
    18245 Shift along axis 220.08117995 
    18246  
    18247 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18248 
    18249 > fitmap #4 inMap #2 resolution 15 metric correlation
    18250 
    18251 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18252 using 2353 points 
    18253 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18254 steps = 40, shift = 0.0482, angle = 0.0272 degrees 
    18255  
    18256 Position of RNAFramework.pdb map 15 (#1) relative to
    18257 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18258 Matrix rotation and translation 
    18259 0.49540935 0.86155888 -0.11084096 190.62448828 
    18260 0.67137330 -0.46073238 -0.58050279 199.42007331 
    18261 -0.55120539 0.21317086 -0.80667878 184.20097901 
    18262 Axis 0.85583570 0.47485463 -0.20508128 
    18263 Axis point 0.00000000 13.88670208 128.57400631 
    18264 Rotation angle (degrees) 152.37495030 
    18265 Shift along axis 220.06261483 
    18266  
    18267 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18268 
    18269 > fitmap #4 inMap #2 resolution 15 metric correlation
    18270 
    18271 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18272 using 2353 points 
    18273 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18274 steps = 28, shift = 0.0647, angle = 0.022 degrees 
    18275  
    18276 Position of RNAFramework.pdb map 15 (#1) relative to
    18277 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18278 Matrix rotation and translation 
    18279 0.49545216 0.86158320 -0.11045992 190.56091457 
    18280 0.67146376 -0.46055287 -0.58054061 199.41625167 
    18281 -0.55105671 0.21346028 -0.80670383 184.20247892 
    18282 Axis 0.85584079 0.47491219 -0.20492669 
    18283 Axis point 0.00000000 13.88655263 128.55466156 
    18284 Rotation angle (degrees) 152.36276477 
    18285 Shift along axis 220.04700834 
    18286  
    18287 Average map value = 0.6806 for 10778 atoms, 6418 outside contour 
    18288 
    18289 > fitmap #4 inMap #2 resolution 15 metric correlation
    18290 
    18291 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18292 using 2353 points 
    18293 correlation = 0.5907, correlation about mean = 0.3437, overlap = 279.1 
    18294 steps = 44, shift = 0.0717, angle = 0.0104 degrees 
    18295  
    18296 Position of RNAFramework.pdb map 15 (#1) relative to
    18297 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18298 Matrix rotation and translation 
    18299 0.49542071 0.86157930 -0.11063130 190.63206724 
    18300 0.67139718 -0.46061155 -0.58057105 199.41581761 
    18301 -0.55116609 0.21334940 -0.80665844 184.19990334 
    18302 Axis 0.85583290 0.47488910 -0.20501312 
    18303 Axis point 0.00000000 13.86828244 128.56843021 
    18304 Rotation angle (degrees) 152.36552748 
    18305 Shift along axis 220.08619690 
    18306  
    18307 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18308 
    18309 > fitmap #4 inMap #2 resolution 15 metric correlation
    18310 
    18311 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18312 using 2353 points 
    18313 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18314 steps = 40, shift = 0.0187, angle = 0.00434 degrees 
    18315  
    18316 Position of RNAFramework.pdb map 15 (#1) relative to
    18317 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18318 Matrix rotation and translation 
    18319 0.49535517 0.86161561 -0.11064201 190.61368632 
    18320 0.67142630 -0.46056540 -0.58057399 199.42086289 
    18321 -0.55118953 0.21330239 -0.80665485 184.19789157 
    18322 Axis 0.85581325 0.47491829 -0.20502755 
    18323 Axis point 0.00000000 13.87212577 128.56788908 
    18324 Rotation angle (degrees) 152.36650401 
    18325 Shift along axis 220.07269136 
    18326  
    18327 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18328 
    18329 > fitmap #4 inMap #2 resolution 15 metric correlation
    18330 
    18331 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18332 using 2353 points 
    18333 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18334 steps = 44, shift = 0.0215, angle = 0.0305 degrees 
    18335  
    18336 Position of RNAFramework.pdb map 15 (#1) relative to
    18337 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18338 Matrix rotation and translation 
    18339 0.49547561 0.86148207 -0.11114136 190.63488355 
    18340 0.67123810 -0.46094786 -0.58048807 199.41746234 
    18341 -0.55131048 0.21301538 -0.80664804 184.19880701 
    18342 Axis 0.85586114 0.47475993 -0.20519435 
    18343 Axis point 0.00000000 13.90221400 128.58635879 
    18344 Rotation angle (degrees) 152.38227119 
    18345 Shift along axis 220.03585504 
    18346  
    18347 Average map value = 0.6806 for 10778 atoms, 6422 outside contour 
    18348 
    18349 > fitmap #4 inMap #2 resolution 15 metric correlation
    18350 
    18351 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18352 using 2353 points 
    18353 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18354 steps = 40, shift = 0.0114, angle = 0.0136 degrees 
    18355  
    18356 Position of RNAFramework.pdb map 15 (#1) relative to
    18357 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18358 Matrix rotation and translation 
    18359 0.49560625 0.86140452 -0.11116005 190.63003820 
    18360 0.67127177 -0.46110227 -0.58032648 199.42657327 
    18361 -0.55115204 0.21299484 -0.80676173 184.20507963 
    18362 Axis 0.85590729 0.47470344 -0.20513252 
    18363 Axis point 0.00000000 13.93038725 128.57826030 
    18364 Rotation angle (degrees) 152.39076723 
    18365 Shift along axis 220.04366767 
    18366  
    18367 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18368 
    18369 > fitmap #4 inMap #2 resolution 15 metric correlation
    18370 
    18371 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18372 using 2353 points 
    18373 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18374 steps = 40, shift = 0.00473, angle = 0.00514 degrees 
    18375  
    18376 Position of RNAFramework.pdb map 15 (#1) relative to
    18377 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18378 Matrix rotation and translation 
    18379 0.49557757 0.86141196 -0.11123020 190.63263110 
    18380 0.67123678 -0.46110773 -0.58036261 199.42326639 
    18381 -0.55122044 0.21295290 -0.80672607 184.20273972 
    18382 Axis 0.85589835 0.47470006 -0.20517766 
    18383 Axis point 0.00000000 13.92657014 128.58314144 
    18384 Rotation angle (degrees) 152.39067343 
    18385 Shift along axis 220.03410256 
    18386  
    18387 Average map value = 0.6806 for 10778 atoms, 6423 outside contour 
    18388 
    18389 > fitmap #4 inMap #2 resolution 15 metric correlation
    18390 
    18391 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18392 using 2353 points 
    18393 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18394 steps = 40, shift = 0.0026, angle = 0.00699 degrees 
    18395  
    18396 Position of RNAFramework.pdb map 15 (#1) relative to
    18397 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18398 Matrix rotation and translation 
    18399 0.49559421 0.86141797 -0.11110948 190.63064611 
    18400 0.67126668 -0.46105437 -0.58037044 199.42445103 
    18401 -0.55116907 0.21304415 -0.80673707 184.20263524 
    18402 Axis 0.85590106 0.47471710 -0.20512692 
    18403 Axis point 0.00000000 13.92282522 128.57776153 
    18404 Rotation angle (degrees) 152.38702621 
    18405 Shift along axis 220.04624920 
    18406  
    18407 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18408 
    18409 > fitmap #4 inMap #2 resolution 15 metric correlation
    18410 
    18411 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18412 using 2353 points 
    18413 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18414 steps = 28, shift = 0.0395, angle = 0.0377 degrees 
    18415  
    18416 Position of RNAFramework.pdb map 15 (#1) relative to
    18417 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18418 Matrix rotation and translation 
    18419 0.49555477 0.86152174 -0.11047905 190.59329093 
    18420 0.67139906 -0.46064191 -0.58054479 199.43078000 
    18421 -0.55104327 0.21351622 -0.80669821 184.19506341 
    18422 Axis 0.85587178 0.47485833 -0.20492208 
    18423 Axis point 0.00000000 13.89273474 128.55520136 
    18424 Rotation angle (degrees) 152.36157971 
    18425 Shift along axis 220.07915227 
    18426  
    18427 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18428 
    18429 > fitmap #4 inMap #2 resolution 15 metric correlation
    18430 
    18431 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18432 using 2353 points 
    18433 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18434 steps = 40, shift = 0.0368, angle = 0.0153 degrees 
    18435  
    18436 Position of RNAFramework.pdb map 15 (#1) relative to
    18437 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18438 Matrix rotation and translation 
    18439 0.49543684 0.86155912 -0.11071615 190.62647307 
    18440 0.67138196 -0.46067874 -0.58053534 199.41891302 
    18441 -0.55117013 0.21328578 -0.80667250 184.19989618 
    18442 Axis 0.85584060 0.47486567 -0.20503528 
    18443 Axis point 0.00000000 13.87936391 128.56974092 
    18444 Rotation angle (degrees) 152.36955017 
    18445 Shift along axis 220.07559387 
    18446  
    18447 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18448 
    18449 > fitmap #4 inMap #2 resolution 15 metric correlation
    18450 
    18451 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18452 using 2353 points 
    18453 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18454 steps = 40, shift = 0.0437, angle = 0.0161 degrees 
    18455  
    18456 Position of RNAFramework.pdb map 15 (#1) relative to
    18457 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18458 Matrix rotation and translation 
    18459 0.49554919 0.86152720 -0.11046147 190.58721199 
    18460 0.67142533 -0.46063474 -0.58052010 199.43446861 
    18461 -0.55101629 0.21350965 -0.80671838 184.19428983 
    18462 Axis 0.85587082 0.47486635 -0.20490749 
    18463 Axis point 0.00000000 13.89724743 128.55213608 
    18464 Rotation angle (degrees) 152.36272706 
    18465 Shift along axis 220.07996272 
    18466  
    18467 Average map value = 0.6806 for 10778 atoms, 6421 outside contour 
    18468 
    18469 > fitmap #4 inMap #2 resolution 15 metric correlation
    18470 
    18471 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18472 using 2353 points 
    18473 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18474 steps = 40, shift = 0.00416, angle = 0.00413 degrees 
    18475  
    18476 Position of RNAFramework.pdb map 15 (#1) relative to
    18477 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18478 Matrix rotation and translation 
    18479 0.49549743 0.86155982 -0.11043924 190.58282579 
    18480 0.67143938 -0.46057415 -0.58055193 199.43416922 
    18481 -0.55104571 0.21350875 -0.80669852 184.19319045 
    18482 Axis 0.85585360 0.47489398 -0.20491540 
    18483 Axis point 0.00000000 13.89130794 128.55286626 
    18484 Rotation angle (degrees) 152.36095487 
    18485 Shift along axis 220.07706232 
    18486  
    18487 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18488 
    18489 > fitmap #4 inMap #2 resolution 15 metric correlation
    18490 
    18491 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18492 using 2353 points 
    18493 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18494 steps = 40, shift = 0.0454, angle = 0.0386 degrees 
    18495  
    18496 Position of RNAFramework.pdb map 15 (#1) relative to
    18497 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18498 Matrix rotation and translation 
    18499 0.49550961 0.86146839 -0.11109591 190.62509056 
    18500 0.67128842 -0.46097020 -0.58041214 199.42362083 
    18501 -0.55121865 0.21302241 -0.80670894 184.20149548 
    18502 Axis 0.85587371 0.47475811 -0.20514613 
    18503 Axis point 0.00000000 13.91423802 128.57966939 
    18504 Rotation angle (degrees) 152.38531424 
    18505 Shift along axis 220.04075945 
    18506  
    18507 Average map value = 0.6806 for 10778 atoms, 6420 outside contour 
    18508 
    18509 > fitmap #4 inMap #2 resolution 15 metric correlation
    18510 
    18511 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18512 using 2353 points 
    18513 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    18514 steps = 28, shift = 0.0716, angle = 0.0741 degrees 
    18515  
    18516 Position of RNAFramework.pdb map 15 (#1) relative to
    18517 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18518 Matrix rotation and translation 
    18519 0.49537948 0.86170234 -0.10985488 190.55672806 
    18520 0.67160664 -0.46012886 -0.58071152 199.43403843 
    18521 -0.55094792 0.21389332 -0.80666344 184.18860222 
    18522 Axis 0.85580204 0.47506421 -0.20473609 
    18523 Axis point 0.00000000 13.85190655 128.53331726 
    18524 Rotation angle (degrees) 152.33858246 
    18525 Shift along axis 220.11275659 
    18526  
    18527 Average map value = 0.6806 for 10778 atoms, 6419 outside contour 
    18528 
    18529 > fitmap #4 inMap #2
    18530 
    18531 Fit molecule RNAFramework.pdb (#4) to map
    18532 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    18533 average map value = 0.6819, steps = 60 
    18534 shifted from previous position = 1.51 
    18535 rotated from previous position = 1.91 degrees 
    18536 atoms outside contour = 6485, contour level = 0.4 
    18537  
    18538 Position of RNAFramework.pdb (#4) relative to
    18539 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18540 Matrix rotation and translation 
    18541 0.47580944 0.87307217 -0.10653739 190.17736201 
    18542 0.66776632 -0.43741636 -0.60229144 197.96480713 
    18543 -0.57244514 0.21543389 -0.79113505 183.48377262 
    18544 Axis 0.84890282 0.48367146 -0.21313356 
    18545 Axis point 0.00000000 10.03700833 129.59793598 
    18546 Rotation angle (degrees) 151.20765341 
    18547 Shift along axis 218.08547707 
    18548  
    18549 
    18550 > fitmap #4 inMap #2
    18551 
    18552 Fit molecule RNAFramework.pdb (#4) to map
    18553 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    18554 average map value = 0.6819, steps = 28 
    18555 shifted from previous position = 0.068 
    18556 rotated from previous position = 0.0404 degrees 
    18557 atoms outside contour = 6492, contour level = 0.4 
    18558  
    18559 Position of RNAFramework.pdb (#4) relative to
    18560 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18561 Matrix rotation and translation 
    18562 0.47579234 0.87299679 -0.10722920 190.24268340 
    18563 0.66762240 -0.43782318 -0.60215539 197.95217689 
    18564 -0.57262720 0.21491232 -0.79114515 183.49523490 
    18565 Axis 0.84891649 0.48353891 -0.21337976 
    18566 Axis point 0.00000000 10.05176911 129.62981857 
    18567 Rotation angle (degrees) 151.23347984 
    18568 Shift along axis 218.06356185 
    18569  
    18570 
    18571 > fitmap #4 inMap #2
    18572 
    18573 Fit molecule RNAFramework.pdb (#4) to map
    18574 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    18575 average map value = 0.6819, steps = 28 
    18576 shifted from previous position = 0.0646 
    18577 rotated from previous position = 0.0485 degrees 
    18578 atoms outside contour = 6486, contour level = 0.4 
    18579  
    18580 Position of RNAFramework.pdb (#4) relative to
    18581 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18582 Matrix rotation and translation 
    18583 0.47577642 0.87310473 -0.10641792 190.17995027 
    18584 0.66775970 -0.43729998 -0.60238329 197.96001768 
    18585 -0.57248030 0.21553819 -0.79108120 183.48299564 
    18586 Axis 0.84888644 0.48370662 -0.21311900 
    18587 Axis point 0.00000000 10.01832473 129.59874334 
    18588 Rotation angle (degrees) 151.19949227 
    18589 Shift along axis 218.09203984 
    18590  
    18591 
    18592 > fitmap #4 inMap #2
    18593 
    18594 Fit molecule RNAFramework.pdb (#4) to map
    18595 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    18596 average map value = 0.6819, steps = 28 
    18597 shifted from previous position = 0.0602 
    18598 rotated from previous position = 0.0234 degrees 
    18599 atoms outside contour = 6491, contour level = 0.4 
    18600  
    18601 Position of RNAFramework.pdb (#4) relative to
    18602 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18603 Matrix rotation and translation 
    18604 0.47570542 0.87309445 -0.10681892 190.23734388 
    18605 0.66768317 -0.43748016 -0.60233729 197.94757983 
    18606 -0.57262855 0.21521393 -0.79106218 183.49250120 
    18607 Axis 0.84887434 0.48365635 -0.21328127 
    18608 Axis point 0.00000000 10.01077322 129.62230346 
    18609 Rotation angle (degrees) 151.21330103 
    18610 Shift along axis 218.09068879 
    18611  
    18612 
    18613 > fitmap #4 inMap #2 search 500 resolution 15
    18614 
    18615 Found 91 unique fits from 500 random placements having fraction of points
    18616 inside contour >= 0.100 (499 of 500). 
    18617  
    18618 Correlations and times found: 
    18619 0.5906 (59), 0.5732 (45), 0.5456 (14), 0.54 (42), 0.5399 (30), 0.5393 (26),
    18620 0.5315 (15), 0.5189 (22), 0.518 (20), 0.5165 (22), 0.5109 (10), 0.5091 (6),
    18621 0.5048 (1), 0.5041 (10), 0.5019 (4), 0.4949 (17), 0.4945 (10), 0.4902 (1),
    18622 0.4892 (9), 0.4889 (3), 0.4882 (12), 0.4836 (5), 0.4827 (1), 0.4818 (5),
    18623 0.4778 (2), 0.4726 (1), 0.4676 (7), 0.4672 (1), 0.467 (2), 0.4647 (1), 0.4637
    18624 (1), 0.462 (1), 0.4613 (2), 0.4472 (2), 0.4437 (4), 0.4382 (3), 0.438 (3),
    18625 0.4368 (3), 0.4363 (3), 0.4363 (1), 0.4361 (2), 0.4357 (1), 0.4357 (1), 0.4353
    18626 (1), 0.4317 (1), 0.4314 (2), 0.4295 (2), 0.4292 (1), 0.4282 (2), 0.4268 (1),
    18627 0.4266 (1), 0.4259 (1), 0.4255 (1), 0.4245 (3), 0.4245 (1), 0.424 (1), 0.4189
    18628 (2), 0.4188 (3), 0.4165 (2), 0.4159 (3), 0.4122 (3), 0.4114 (1), 0.4092 (2),
    18629 0.4067 (2), 0.406 (1), 0.4043 (2), 0.3974 (1), 0.3933 (1), 0.3893 (1), 0.3893
    18630 (1), 0.3878 (1), 0.3873 (2), 0.3856 (1), 0.3821 (3), 0.3801 (1), 0.3785 (1),
    18631 0.376 (2), 0.3756 (1), 0.3751 (1), 0.3709 (1), 0.3629 (1), 0.3464 (1), 0.3426
    18632 (1), 0.3417 (1), 0.3197 (1), 0.3192 (1), 0.3152 (1), 0.3143 (1), 0.3111 (1),
    18633 0.2722 (1), 0.2628 (2) 
    18634  
    18635 Best fit found: 
    18636 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18637 using 2353 points 
    18638 correlation = 0.5906, correlation about mean = 0.3429, overlap = 279.2 
    18639 steps = 296, shift = 10.9, angle = 85.6 degrees 
    18640 Position of RNAFramework.pdb map 15 (#1) relative to
    18641 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18642 Matrix rotation and translation 
    18643 0.49216114 0.86349117 -0.11027336 190.60913071 
    18644 0.67192835 -0.45736794 -0.58251763 199.08772326 
    18645 -0.55343436 0.21259676 -0.80530295 184.27720443 
    18646 Axis 0.85476661 0.47640846 -0.20593452 
    18647 Axis point 0.00000000 13.29889683 128.71740629 
    18648 Rotation angle (degrees) 152.28290744 
    18649 Shift along axis 219.82435822 
    18650  
    18651 Found 91 fits. 
    18652 
    18653 > fitmap #4 inMap #2 resolution 15 metric correlation
    18654 
    18655 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18656 using 2353 points 
    18657 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18658 steps = 40, shift = 0.574, angle = 0.626 degrees 
    18659  
    18660 Position of RNAFramework.pdb map 15 (#1) relative to
    18661 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18662 Matrix rotation and translation 
    18663 -0.53420875 -0.83769076 -0.11355627 193.07055231 
    18664 -0.83150651 0.54490942 -0.10803063 181.37172197 
    18665 0.15237416 0.03671186 -0.98764072 190.52464258 
    18666 Axis 0.47796195 -0.87814312 0.02042136 
    18667 Axis point 137.57798851 0.00000000 107.04978110 
    18668 Rotation angle (degrees) 171.29098549 
    18669 Shift along axis -63.09918006 
    18670  
    18671 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    18672 
    18673 > select subtract #4
    18674 
    18675 Nothing selected 
    18676 
    18677 > fitmap #4 inMap #2 resolution 15 metric correlation
    18678 
    18679 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18680 using 2353 points 
    18681 correlation = 0.4974, correlation about mean = 0.2314, overlap = 216.8 
    18682 steps = 132, shift = 7.61, angle = 14.7 degrees 
    18683  
    18684 Position of RNAFramework.pdb map 15 (#1) relative to
    18685 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18686 Matrix rotation and translation 
    18687 -0.34380805 -0.90657882 -0.24476656 188.67838056 
    18688 -0.90777064 0.25416603 0.33369447 199.36718971 
    18689 -0.24030899 0.33691876 -0.91035002 188.28614843 
    18690 Axis 0.57279192 -0.79188507 -0.21172495 
    18691 Axis point 166.29260039 0.00000000 67.70413075 
    18692 Rotation angle (degrees) 179.83873878 
    18693 Shift along axis -89.66732537 
    18694  
    18695 Average map value = 0.535 for 10778 atoms, 7329 outside contour 
    18696 
    18697 > fitmap #4 inMap #2 resolution 15 metric correlation
    18698 
    18699 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18700 using 2353 points 
    18701 correlation = 0.4974, correlation about mean = 0.2313, overlap = 216.8 
    18702 steps = 36, shift = 0.035, angle = 0.0841 degrees 
    18703  
    18704 Position of RNAFramework.pdb map 15 (#1) relative to
    18705 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18706 Matrix rotation and translation 
    18707 -0.34508787 -0.90623820 -0.24422631 188.69424391 
    18708 -0.90735715 0.25557119 0.33374581 199.36185221 
    18709 -0.24003599 0.33677213 -0.91047629 188.31389719 
    18710 Axis 0.57223297 -0.79232860 -0.21157698 
    18711 Axis point 166.19709272 0.00000000 67.73928897 
    18712 Rotation angle (degrees) 179.84849215 
    18713 Shift along axis -89.82591342 
    18714  
    18715 Average map value = 0.5349 for 10778 atoms, 7329 outside contour 
    18716 
    18717 > fitmap #4 inMap #2 resolution 15 metric correlation
    18718 
    18719 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18720 using 2353 points 
    18721 correlation = 0.4974, correlation about mean = 0.2314, overlap = 216.7 
    18722 steps = 28, shift = 0.0534, angle = 0.0355 degrees 
    18723  
    18724 Position of RNAFramework.pdb map 15 (#1) relative to
    18725 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18726 Matrix rotation and translation 
    18727 -0.34451212 -0.90646373 -0.24420220 188.64746040 
    18728 -0.90754848 0.25504448 0.33362849 199.35282523 
    18729 -0.24013970 0.33656441 -0.91052575 188.32729698 
    18730 Axis 0.57248440 -0.79216241 -0.21151911 
    18731 Axis point 166.22140438 0.00000000 67.74281125 
    18732 Rotation angle (degrees) 179.85308283 
    18733 Shift along axis -89.75690842 
    18734  
    18735 Average map value = 0.5348 for 10778 atoms, 7326 outside contour 
    18736 
    18737 > select down
    18738 
    18739 Nothing selected 
    18740 
    18741 > select down
    18742 
    18743 Nothing selected 
    18744 
    18745 > select down
    18746 
    18747 Nothing selected 
    18748 
    18749 > select down
    18750 
    18751 Nothing selected 
    18752 
    18753 > select down
    18754 
    18755 Nothing selected 
    18756 
    18757 > select down
    18758 
    18759 Nothing selected 
    18760 
    18761 > select down
    18762 
    18763 Nothing selected 
    18764 
    18765 > fitmap #4 inMap #2 resolution 15 metric correlation
    18766 
    18767 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18768 using 2353 points 
    18769 correlation = 0.4327, correlation about mean = 0.1362, overlap = 186.1 
    18770 steps = 64, shift = 2.9, angle = 1.52 degrees 
    18771  
    18772 Position of RNAFramework.pdb map 15 (#1) relative to
    18773 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18774 Matrix rotation and translation 
    18775 0.90390778 -0.42729330 0.01925256 214.03885509 
    18776 -0.42614854 -0.89579666 0.12627523 200.68333404 
    18777 -0.03671024 -0.12234559 -0.99180818 157.38807681 
    18778 Axis -0.97558048 0.21959631 0.00449198 
    18779 Axis point 0.00000000 129.61535018 71.42607292 
    18780 Rotation angle (degrees) 172.67935514 
    18781 Shift along axis -164.03582638 
    18782  
    18783 Average map value = 0.464 for 10778 atoms, 7791 outside contour 
    18784 
    18785 > fitmap #4 inMap #2 resolution 15 metric correlation
    18786 
    18787 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18788 using 2353 points 
    18789 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18790 steps = 340, shift = 39.6, angle = 39.9 degrees 
    18791  
    18792 Position of RNAFramework.pdb map 15 (#1) relative to
    18793 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18794 Matrix rotation and translation 
    18795 -0.53432138 -0.83761530 -0.11358196 193.08762964 
    18796 -0.83141762 0.54502817 -0.10811398 181.36422796 
    18797 0.15246336 0.03666652 -0.98762851 190.52469055 
    18798 Axis 0.47789913 -0.87817647 0.02045763 
    18799 Axis point 137.57302895 0.00000000 107.05737056 
    18800 Rotation angle (degrees) 171.28752654 
    18801 Shift along axis -63.09570315 
    18802  
    18803 Average map value = 0.621 for 10778 atoms, 6736 outside contour 
    18804 
    18805 > fitmap #4 inMap #2 resolution 15 metric correlation
    18806 
    18807 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18808 using 2353 points 
    18809 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18810 steps = 40, shift = 0.01, angle = 0.0143 degrees 
    18811  
    18812 Position of RNAFramework.pdb map 15 (#1) relative to
    18813 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18814 Matrix rotation and translation 
    18815 -0.53416402 -0.83772802 -0.11349073 193.08141535 
    18816 -0.83154542 0.54485409 -0.10800850 181.36957075 
    18817 0.15231771 0.03667854 -0.98765054 190.52737049 
    18818 Axis 0.47798978 -0.87812789 0.02042491 
    18819 Axis point 137.59002042 0.00000000 107.04758641 
    18820 Rotation angle (degrees) 171.29485898 
    18821 Shift along axis -63.08322932 
    18822  
    18823 Average map value = 0.621 for 10778 atoms, 6740 outside contour 
    18824 
    18825 > fitmap #4 inMap #2 resolution 15 metric correlation
    18826 
    18827 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18828 using 2353 points 
    18829 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18830 steps = 36, shift = 0.00828, angle = 0.00928 degrees 
    18831  
    18832 Position of RNAFramework.pdb map 15 (#1) relative to
    18833 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18834 Matrix rotation and translation 
    18835 -0.53427936 -0.83765656 -0.11347529 193.08538975 
    18836 -0.83146102 0.54496883 -0.10807928 181.36528946 
    18837 0.15237389 0.03660585 -0.98764457 190.52272634 
    18838 Axis 0.47792802 -0.87816057 0.02046526 
    18839 Axis point 137.58204744 0.00000000 107.05017707 
    18840 Rotation angle (degrees) 171.29384092 
    18841 Shift along axis -63.08783094 
    18842  
    18843 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    18844 
    18845 > fitmap #4 inMap #2 resolution 15 metric correlation
    18846 
    18847 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18848 using 2353 points 
    18849 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    18850 steps = 28, shift = 0.0466, angle = 0.0103 degrees 
    18851  
    18852 Position of RNAFramework.pdb map 15 (#1) relative to
    18853 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18854 Matrix rotation and translation 
    18855 -0.53440547 -0.83758426 -0.11341512 193.04133386 
    18856 -0.83140083 0.54508100 -0.10797662 181.38140939 
    18857 0.15226001 0.03659022 -0.98766271 190.51525453 
    18858 Axis 0.47786818 -0.87819374 0.02043940 
    18859 Axis point 137.56284263 0.00000000 107.03586186 
    18860 Rotation angle (degrees) 171.29991620 
    18861 Shift along axis -63.14568938 
    18862  
    18863 Average map value = 0.621 for 10778 atoms, 6734 outside contour 
    18864 
    18865 > fitmap #4 inMap #2 resolution 15 metric correlation
    18866 
    18867 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18868 using 2353 points 
    18869 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    18870 steps = 40, shift = 0.00848, angle = 0.0244 degrees 
    18871  
    18872 Position of RNAFramework.pdb map 15 (#1) relative to
    18873 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18874 Matrix rotation and translation 
    18875 -0.53415637 -0.83778155 -0.11313104 193.04229613 
    18876 -0.83158732 0.54479126 -0.10800284 181.37555084 
    18877 0.15211566 0.03638803 -0.98769242 190.50864422 
    18878 Axis 0.47801351 -0.87811308 0.02050632 
    18879 Axis point 137.59344766 0.00000000 107.02478578 
    18880 Rotation angle (degrees) 171.31325041 
    18881 Shift along axis -63.08478702 
    18882  
    18883 Average map value = 0.621 for 10778 atoms, 6733 outside contour 
    18884 
    18885 > fitmap #4 inMap #2 resolution 15 metric correlation
    18886 
    18887 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18888 using 2353 points 
    18889 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18890 steps = 36, shift = 0.0483, angle = 0.0407 degrees 
    18891  
    18892 Position of RNAFramework.pdb map 15 (#1) relative to
    18893 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18894 Matrix rotation and translation 
    18895 -0.53446983 -0.83751042 -0.11365683 193.08392952 
    18896 -0.83130293 0.54518954 -0.10818228 181.36261185 
    18897 0.15256838 0.03666318 -0.98761242 190.52100161 
    18898 Axis 0.47781513 -0.87822172 0.02047723 
    18899 Axis point 137.55478191 0.00000000 107.06308903 
    18900 Rotation angle (degrees) 171.28204255 
    18901 Shift along axis -63.11681984 
    18902  
    18903 Average map value = 0.621 for 10778 atoms, 6736 outside contour 
    18904 
    18905 > scalebar 50
    18906 
    18907 > fitmap #4 inMap #2 resolution 15 metric correlation
    18908 
    18909 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18910 using 2353 points 
    18911 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18912 steps = 40, shift = 0.0149, angle = 0.0182 degrees 
    18913  
    18914 Position of RNAFramework.pdb map 15 (#1) relative to
    18915 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18916 Matrix rotation and translation 
    18917 -0.53424977 -0.83765754 -0.11360728 193.07668661 
    18918 -0.83147234 0.54495840 -0.10804484 181.37118061 
    18919 0.15241589 0.03673847 -0.98763316 190.52794818 
    18920 Axis 0.47793738 -0.87815658 0.02041767 
    18921 Axis point 137.57479994 0.00000000 107.05442123 
    18922 Rotation angle (degrees) 171.28805908 
    18923 Shift along axis -63.10359169 
    18924  
    18925 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    18926 
    18927 > fitmap #4 inMap #2 resolution 15 metric correlation
    18928 
    18929 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18930 using 2353 points 
    18931 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18932 steps = 40, shift = 0.00511, angle = 0.00574 degrees 
    18933  
    18934 Position of RNAFramework.pdb map 15 (#1) relative to
    18935 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18936 Matrix rotation and translation 
    18937 -0.53421094 -0.83769339 -0.11352549 193.08180220 
    18938 -0.83150838 0.54490671 -0.10802819 181.36903355 
    18939 0.15235538 0.03668765 -0.98764439 190.52714387 
    18940 Axis 0.47796270 -0.87814257 0.02042766 
    18941 Axis point 137.58442948 0.00000000 107.05013885 
    18942 Rotation angle (degrees) 171.29261510 
    18943 Shift along axis -63.08994634 
    18944  
    18945 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    18946 
    18947 > fitmap #4 inMap #2 resolution 15 metric correlation
    18948 
    18949 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18950 using 2353 points 
    18951 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18952 steps = 36, shift = 0.00767, angle = 0.0065 degrees 
    18953  
    18954 Position of RNAFramework.pdb map 15 (#1) relative to
    18955 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18956 Matrix rotation and translation 
    18957 -0.53428542 -0.83765228 -0.11347831 193.08655249 
    18958 -0.83145713 0.54497523 -0.10807698 181.36545610 
    18959 0.15237387 0.03660849 -0.98764447 190.52310702 
    18960 Axis 0.47792474 -0.87816239 0.02046381 
    18961 Axis point 137.58216009 0.00000000 107.05034338 
    18962 Rotation angle (degrees) 171.29376005 
    18963 Shift along axis -63.08865330 
    18964  
    18965 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    18966 
    18967 > fitmap #4 inMap #2 resolution 15 metric correlation
    18968 
    18969 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18970 using 2353 points 
    18971 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    18972 steps = 28, shift = 0.00597, angle = 0.0174 degrees 
    18973  
    18974 Position of RNAFramework.pdb map 15 (#1) relative to
    18975 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18976 Matrix rotation and translation 
    18977 -0.53428123 -0.83761632 -0.11376316 193.08713471 
    18978 -0.83141675 0.54501821 -0.10817084 181.36407455 
    18979 0.15260873 0.03679104 -0.98760143 190.52976116 
    18980 Axis 0.47790863 -0.87817174 0.02043866 
    18981 Axis point 137.56339572 -0.00000000 107.07010940 
    18982 Rotation angle (degrees) 171.27670144 
    18983 Shift along axis -63.09662352 
    18984  
    18985 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    18986 
    18987 > fitmap #4 inMap #2 resolution 15 metric correlation
    18988 
    18989 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    18990 using 2353 points 
    18991 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    18992 steps = 36, shift = 0.0412, angle = 0.0338 degrees 
    18993  
    18994 Position of RNAFramework.pdb map 15 (#1) relative to
    18995 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    18996 Matrix rotation and translation 
    18997 -0.53419059 -0.83774563 -0.11323537 193.05164083 
    18998 -0.83155757 0.54484047 -0.10798365 181.37714743 
    18999 0.15215811 0.03647797 -0.98768257 190.51670697 
    19000 Axis 0.47799046 -0.87812636 0.02047489 
    19001 Axis point 137.59076601 0.00000000 107.03120782 
    19002 Rotation angle (degrees) 171.30853871 
    19003 Shift along axis -63.09440096 
    19004  
    19005 Average map value = 0.621 for 10778 atoms, 6736 outside contour 
    19006 
    19007 > fitmap #4 inMap #2 resolution 15 metric correlation
    19008 
    19009 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19010 using 2353 points 
    19011 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19012 steps = 40, shift = 0.0148, angle = 0.0135 degrees 
    19013  
    19014 Position of RNAFramework.pdb map 15 (#1) relative to
    19015 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19016 Matrix rotation and translation 
    19017 -0.53433453 -0.83765290 -0.11324230 193.04584796 
    19018 -0.83144177 0.54498954 -0.10812297 181.37036756 
    19019 0.15228546 0.03638064 -0.98766653 190.50543447 
    19020 Axis 0.47791044 -0.87816835 0.02054178 
    19021 Axis point 137.57225001 0.00000000 107.03599606 
    19022 Rotation angle (degrees) 171.30452612 
    19023 Shift along axis -63.10176754 
    19024  
    19025 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19026 
    19027 > fitmap #4 inMap #2 resolution 15 metric correlation
    19028 
    19029 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19030 using 2353 points 
    19031 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19032 steps = 36, shift = 0.0468, angle = 0.0337 degrees 
    19033  
    19034 Position of RNAFramework.pdb map 15 (#1) relative to
    19035 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19036 Matrix rotation and translation 
    19037 -0.53453377 -0.83745752 -0.11374595 193.08523724 
    19038 -0.83124830 0.54526764 -0.10820843 181.36430585 
    19039 0.15264202 0.03671016 -0.98759929 190.52605570 
    19040 Axis 0.47777594 -0.87824319 0.02047091 
    19041 Axis point 137.54569099 0.00000000 107.07067459 
    19042 Rotation angle (degrees) 171.27688620 
    19043 Shift along axis -63.13024454 
    19044  
    19045 Average map value = 0.621 for 10778 atoms, 6735 outside contour 
    19046 
    19047 > fitmap #4 inMap #2 resolution 15 metric correlation
    19048 
    19049 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19050 using 2353 points 
    19051 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19052 steps = 40, shift = 0.0564, angle = 0.0552 degrees 
    19053  
    19054 Position of RNAFramework.pdb map 15 (#1) relative to
    19055 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19056 Matrix rotation and translation 
    19057 -0.53405585 -0.83784955 -0.11310198 193.03757100 
    19058 -0.83166751 0.54468419 -0.10792535 181.38096028 
    19059 0.15203014 0.03642517 -0.98770422 190.51319974 
    19060 Axis 0.47807010 -0.87808302 0.02047411 
    19061 Axis point 137.60304061 0.00000000 107.02019941 
    19062 Rotation angle (degrees) 171.31673244 
    19063 Shift along axis -63.08146270 
    19064  
    19065 Average map value = 0.621 for 10778 atoms, 6733 outside contour 
    19066 
    19067 > fitmap #4 inMap #2 resolution 15 metric correlation
    19068 
    19069 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19070 using 2353 points 
    19071 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19072 steps = 340, shift = 39.6, angle = 39.9 degrees 
    19073  
    19074 Position of RNAFramework.pdb map 15 (#1) relative to
    19075 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19076 Matrix rotation and translation 
    19077 -0.53423704 -0.83766484 -0.11361353 193.08181429 
    19078 -0.83147797 0.54494723 -0.10805774 181.36948982 
    19079 0.15242956 0.03673882 -0.98763104 190.52934547 
    19080 Axis 0.47794346 -0.87815318 0.02042158 
    19081 Axis point 137.57696182 0.00000000 107.05642520 
    19082 Rotation angle (degrees) 171.28736714 
    19083 Shift along axis -63.09709297 
    19084  
    19085 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19086 
    19087 > fitmap #4 inMap #2 resolution 15 metric correlation
    19088 
    19089 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19090 using 2353 points 
    19091 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19092 steps = 36, shift = 0.00977, angle = 0.0108 degrees 
    19093  
    19094 Position of RNAFramework.pdb map 15 (#1) relative to
    19095 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19096 Matrix rotation and translation 
    19097 -0.53421129 -0.83770582 -0.11343231 193.07796616 
    19098 -0.83151349 0.54489378 -0.10805397 181.36666648 
    19099 0.15232602 0.03659697 -0.98765228 190.52085737 
    19100 Axis 0.47796694 -0.87813948 0.02046118 
    19101 Axis point 137.58648546 0.00000000 107.04567592 
    19102 Rotation angle (degrees) 171.29662847 
    19103 Shift along axis -63.08206207 
    19104  
    19105 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    19106 
    19107 > fitmap #4 inMap #2 resolution 15 metric correlation
    19108 
    19109 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19110 using 2353 points 
    19111 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19112 steps = 36, shift = 0.00967, angle = 0.00527 degrees 
    19113  
    19114 Position of RNAFramework.pdb map 15 (#1) relative to
    19115 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19116 Matrix rotation and translation 
    19117 -0.53428275 -0.83765786 -0.11344989 193.08686825 
    19118 -0.83146262 0.54496803 -0.10807091 181.36544333 
    19119 0.15235303 0.03658904 -0.98764841 190.52242907 
    19120 Axis 0.47792799 -0.87816052 0.02046785 
    19121 Axis point 137.58429843 0.00000000 107.04863735 
    19122 Rotation angle (degrees) 171.29536718 
    19123 Shift along axis -63.08676783 
    19124  
    19125 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    19126 
    19127 > fitmap #4 inMap #2 resolution 15 metric correlation
    19128 
    19129 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19130 using 2353 points 
    19131 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19132 steps = 28, shift = 0.0112, angle = 0.0154 degrees 
    19133  
    19134 Position of RNAFramework.pdb map 15 (#1) relative to
    19135 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19136 Matrix rotation and translation 
    19137 -0.53422579 -0.83765855 -0.11371275 193.08255980 
    19138 -0.83147415 0.54495155 -0.10806537 181.37020484 
    19139 0.15248984 0.03681802 -0.98761878 190.53192424 
    19140 Axis 0.47794374 -0.87815350 0.02040122 
    19141 Axis point 137.57243903 0.00000000 107.06160382 
    19142 Rotation angle (degrees) 171.28210635 
    19143 Shift along axis -63.10119706 
    19144  
    19145 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19146 
    19147 > fitmap #4 inMap #2 resolution 15 metric correlation
    19148 
    19149 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19150 using 2353 points 
    19151 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19152 steps = 36, shift = 0.0145, angle = 0.0193 degrees 
    19153  
    19154 Position of RNAFramework.pdb map 15 (#1) relative to
    19155 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19156 Matrix rotation and translation 
    19157 -0.53410955 -0.83777007 -0.11343692 193.07133493 
    19158 -0.83159005 0.54479088 -0.10798361 181.37251935 
    19159 0.15226486 0.03665805 -0.98765944 190.52464182 
    19160 Axis 0.47802215 -0.87811029 0.02042418 
    19161 Axis point 137.59327652 0.00000000 107.04229952 
    19162 Rotation angle (degrees) 171.29820340 
    19163 Shift along axis -63.08138950 
    19164  
    19165 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19166 
    19167 > fitmap #4 inMap #2 resolution 15 metric correlation
    19168 
    19169 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19170 using 2353 points 
    19171 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19172 steps = 40, shift = 0.00972, angle = 0.0121 degrees 
    19173  
    19174 Position of RNAFramework.pdb map 15 (#1) relative to
    19175 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19176 Matrix rotation and translation 
    19177 -0.53419989 -0.83769022 -0.11360105 193.07852661 
    19178 -0.83150861 0.54490719 -0.10802391 181.37193345 
    19179 0.15239262 0.03675401 -0.98763617 190.53022673 
    19180 Axis 0.47796464 -0.87814198 0.02040776 
    19181 Axis point 137.58014859 -0.00000000 107.05384296 
    19182 Rotation angle (degrees) 171.28888619 
    19183 Shift along axis -63.09730457 
    19184  
    19185 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19186 
    19187 > fitmap #4 inMap #2 resolution 15 metric correlation
    19188 
    19189 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19190 using 2353 points 
    19191 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19192 steps = 36, shift = 0.0471, angle = 0.0367 degrees 
    19193  
    19194 Position of RNAFramework.pdb map 15 (#1) relative to
    19195 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19196 Matrix rotation and translation 
    19197 -0.53396829 -0.83790770 -0.11308490 193.03787220 
    19198 -0.83173565 0.54459240 -0.10786336 181.38431505 
    19199 0.15196473 0.03646125 -0.98771295 190.51608952 
    19200 Axis 0.47811892 -0.87805708 0.02044677 
    19201 Axis point 137.61267736 0.00000000 107.01647747 
    19202 Rotation angle (degrees) 171.31919642 
    19203 Shift along axis -63.07528450 
    19204  
    19205 Average map value = 0.621 for 10778 atoms, 6733 outside contour 
    19206 
    19207 > fitmap #4 inMap #2 resolution 15 metric correlation
    19208 
    19209 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19210 using 2353 points 
    19211 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19212 steps = 36, shift = 0.0229, angle = 0.035 degrees 
    19213  
    19214 Position of RNAFramework.pdb map 15 (#1) relative to
    19215 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19216 Matrix rotation and translation 
    19217 -0.53435887 -0.83762480 -0.11333541 193.05366289 
    19218 -0.83142317 0.54502640 -0.10808005 181.37293300 
    19219 0.15230134 0.03647627 -0.98766055 190.51395101 
    19220 Axis 0.47789401 -0.87817821 0.02050219 
    19221 Axis point 137.57107405 0.00000000 107.04048348 
    19222 Rotation angle (degrees) 171.30102772 
    19223 Shift along axis -63.11261551 
    19224  
    19225 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    19226 
    19227 > fitmap #4 inMap #2 resolution 15 metric correlation
    19228 
    19229 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19230 using 2353 points 
    19231 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19232 steps = 44, shift = 0.0195, angle = 0.0305 degrees 
    19233  
    19234 Position of RNAFramework.pdb map 15 (#1) relative to
    19235 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19236 Matrix rotation and translation 
    19237 -0.53404781 -0.83786294 -0.11304096 193.03871736 
    19238 -0.83167930 0.54466680 -0.10792218 181.38009479 
    19239 0.15199367 0.03637834 -0.98771155 190.51137868 
    19240 Axis 0.47807785 -0.87807850 0.02048684 
    19241 Axis point 137.60747991 -0.00000000 107.01706193 
    19242 Rotation angle (degrees) 171.31990481 
    19243 Shift along axis -63.07545218 
    19244  
    19245 Average map value = 0.621 for 10778 atoms, 6733 outside contour 
    19246 
    19247 > fitmap #4 inMap #2 resolution 15 metric correlation
    19248 
    19249 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19250 using 2353 points 
    19251 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19252 steps = 36, shift = 0.0365, angle = 0.0358 degrees 
    19253  
    19254 Position of RNAFramework.pdb map 15 (#1) relative to
    19255 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19256 Matrix rotation and translation 
    19257 -0.53426008 -0.83765713 -0.11356199 193.06970231 
    19258 -0.83146816 0.54496220 -0.10805774 181.37103826 
    19259 0.15240235 0.03669236 -0.98763696 190.52313031 
    19260 Axis 0.47793418 -0.87815792 0.02043470 
    19261 Axis point 137.57291097 0.00000000 107.05127763 
    19262 Rotation angle (degrees) 171.29001371 
    19263 Shift along axis -63.10452145 
    19264  
    19265 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19266 
    19267 > fitmap #4 inMap #2 resolution 15 metric correlation
    19268 
    19269 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19270 using 2353 points 
    19271 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19272 steps = 44, shift = 0.0462, angle = 0.034 degrees 
    19273  
    19274 Position of RNAFramework.pdb map 15 (#1) relative to
    19275 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19276 Matrix rotation and translation 
    19277 -0.53397941 -0.83789096 -0.11315632 193.03137273 
    19278 -0.83171946 0.54461479 -0.10787516 181.39076695 
    19279 0.15201424 0.03651132 -0.98770348 190.51646016 
    19280 Axis 0.47810886 -0.87806281 0.02043579 
    19281 Axis point 137.60610736 -0.00000000 107.01989280 
    19282 Rotation angle (degrees) 171.31526214 
    19283 Shift along axis -63.08912354 
    19284  
    19285 Average map value = 0.621 for 10778 atoms, 6733 outside contour 
    19286 
    19287 > fitmap #4 inMap #2 resolution 15 metric correlation
    19288 
    19289 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19290 using 2353 points 
    19291 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19292 steps = 28, shift = 0.0846, angle = 0.0723 degrees 
    19293  
    19294 Position of RNAFramework.pdb map 15 (#1) relative to
    19295 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19296 Matrix rotation and translation 
    19297 -0.53468649 -0.83734536 -0.11385403 193.10016583 
    19298 -0.83112175 0.54543973 -0.10831301 181.35360720 
    19299 0.15279592 0.03671317 -0.98757538 190.52076190 
    19300 Axis 0.47768689 -0.87829096 0.02049931 
    19301 Axis point 137.53114224 0.00000000 107.07979193 
    19302 Rotation angle (degrees) 171.26871877 
    19303 Shift along axis -63.13427165 
    19304  
    19305 Average map value = 0.6211 for 10778 atoms, 6736 outside contour 
    19306 
    19307 > fitmap #4 inMap #2 resolution 15 metric correlation
    19308 
    19309 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19310 using 2353 points 
    19311 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19312 steps = 340, shift = 39.6, angle = 39.9 degrees 
    19313  
    19314 Position of RNAFramework.pdb map 15 (#1) relative to
    19315 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19316 Matrix rotation and translation 
    19317 -0.53419198 -0.83768481 -0.11367802 193.08464058 
    19318 -0.83150799 0.54491070 -0.10801123 181.37359197 
    19319 0.15242370 0.03682554 -0.98762868 190.53723717 
    19320 Axis 0.47796496 -0.87814236 0.02038366 
    19321 Axis point 137.58001670 -0.00000000 107.05917629 
    19322 Rotation angle (degrees) 171.28532370 
    19323 Shift along axis -63.10029392 
    19324  
    19325 Average map value = 0.621 for 10778 atoms, 6739 outside contour 
    19326 
    19327 > fitmap #4 inMap #2 resolution 15 metric correlation
    19328 
    19329 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19330 using 2353 points 
    19331 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19332 steps = 36, shift = 0.0202, angle = 0.0155 degrees 
    19333  
    19334 Position of RNAFramework.pdb map 15 (#1) relative to
    19335 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19336 Matrix rotation and translation 
    19337 -0.53428511 -0.83765712 -0.11344418 193.08332464 
    19338 -0.83145790 0.54497045 -0.10809536 181.36381821 
    19339 0.15237053 0.03657040 -0.98764636 190.51996910 
    19340 Axis 0.47792633 -0.87816114 0.02048011 
    19341 Axis point 137.58159027 0.00000000 107.04888285 
    19342 Rotation angle (degrees) 171.29498378 
    19343 Shift along axis -63.08518335 
    19344  
    19345 Average map value = 0.621 for 10778 atoms, 6738 outside contour 
    19346 
    19347 > volume #2 level 0.3122
    19348 
    19349 > fitmap #4 inMap #2
    19350 
    19351 Fit molecule RNAFramework.pdb (#4) to map
    19352 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    19353 average map value = 0.6226, steps = 60 
    19354 shifted from previous position = 1.01 
    19355 rotated from previous position = 1.01 degrees 
    19356 atoms outside contour = 6395, contour level = 0.31215 
    19357  
    19358 Position of RNAFramework.pdb (#4) relative to
    19359 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19360 Matrix rotation and translation 
    19361 -0.53004801 -0.83800827 -0.12957951 193.29252179 
    19362 -0.83156536 0.54360091 -0.11400322 181.31194953 
    19363 0.16597515 0.04732674 -0.98499337 189.58267095 
    19364 Axis 0.47903526 -0.87758716 0.01913086 
    19365 Axis point 136.91350534 0.00000000 107.56214763 
    19366 Rotation angle (degrees) 170.30574709 
    19367 Shift along axis -62.89622644 
    19368  
    19369 
    19370 > fitmap #4 inMap #2
    19371 
    19372 Fit molecule RNAFramework.pdb (#4) to map
    19373 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    19374 average map value = 0.6226, steps = 40 
    19375 shifted from previous position = 0.0442 
    19376 rotated from previous position = 0.0479 degrees 
    19377 atoms outside contour = 6393, contour level = 0.31215 
    19378  
    19379 Position of RNAFramework.pdb (#4) relative to
    19380 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19381 Matrix rotation and translation 
    19382 -0.52947493 -0.83833849 -0.12978631 193.28640962 
    19383 -0.83197805 0.54304847 -0.11362447 181.33637015 
    19384 0.16573599 0.04781814 -0.98500991 189.61504273 
    19385 Axis 0.47933557 -0.87742851 0.01888463 
    19386 Axis point 136.95396077 0.00000000 107.55648370 
    19387 Rotation angle (degrees) 170.30504921 
    19388 Shift along axis -62.87983970 
    19389  
    19390 
    19391 > fitmap #4 inMap #2
    19392 
    19393 Fit molecule RNAFramework.pdb (#4) to map
    19394 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    19395 average map value = 0.6225, steps = 28 
    19396 shifted from previous position = 0.0824 
    19397 rotated from previous position = 0.0828 degrees 
    19398 atoms outside contour = 6391, contour level = 0.31215 
    19399  
    19400 Position of RNAFramework.pdb (#4) relative to
    19401 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19402 Matrix rotation and translation 
    19403 -0.52849570 -0.83896263 -0.12974441 193.23413687 
    19404 -0.83273295 0.54203563 -0.11292851 181.37524959 
    19405 0.16506886 0.04836030 -0.98509546 189.65024816 
    19406 Axis 0.47987375 -0.87714175 0.01853483 
    19407 Axis point 137.02605804 0.00000000 107.51818130 
    19408 Rotation angle (degrees) 170.32534108 
    19409 Shift along axis -62.84867813 
    19410  
    19411 
    19412 > fitmap #4 inMap #2 resolution 15 metric correlation
    19413 
    19414 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19415 using 2353 points 
    19416 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19417 steps = 48, shift = 0.934, angle = 1.02 degrees 
    19418  
    19419 Position of RNAFramework.pdb map 15 (#1) relative to
    19420 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19421 Matrix rotation and translation 
    19422 -0.53422469 -0.83768425 -0.11352836 193.08411647 
    19423 -0.83149552 0.54492175 -0.10805153 181.36639674 
    19424 0.15237710 0.03667462 -0.98764149 190.52514015 
    19425 Axis 0.47795475 -0.87814665 0.02043814 
    19426 Axis point 137.58317902 -0.00000000 107.05100849 
    19427 Rotation angle (degrees) 171.29184381 
    19428 Shift along axis -63.08684411 
    19429  
    19430 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19431 
    19432 > fitmap #4 inMap #2 resolution 15 metric correlation
    19433 
    19434 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19435 using 2353 points 
    19436 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19437 steps = 40, shift = 0.00364, angle = 0.00361 degrees 
    19438  
    19439 Position of RNAFramework.pdb map 15 (#1) relative to
    19440 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19441 Matrix rotation and translation 
    19442 -0.53423681 -0.83768089 -0.11349610 193.08390614 
    19443 -0.83149905 0.54492686 -0.10799850 181.36802137 
    19444 0.15231532 0.03667521 -0.98765099 190.52804518 
    19445 Axis 0.47795172 -0.87814866 0.02042266 
    19446 Axis point 137.58601620 0.00000000 107.04746280 
    19447 Rotation angle (degrees) 171.29496769 
    19448 Shift along axis -63.09220945 
    19449  
    19450 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19451 
    19452 > fitmap #4 inMap #2 resolution 15 metric correlation
    19453 
    19454 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19455 using 2353 points 
    19456 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19457 steps = 36, shift = 0.0125, angle = 0.00771 degrees 
    19458  
    19459 Position of RNAFramework.pdb map 15 (#1) relative to
    19460 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19461 Matrix rotation and translation 
    19462 -0.53427372 -0.83766737 -0.11342211 193.08039925 
    19463 -0.83146694 0.54495591 -0.10809914 181.36330877 
    19464 0.15236114 0.03655229 -0.98764848 190.51753339 
    19465 Axis 0.47793339 -0.87815715 0.02048644 
    19466 Axis point 137.58195214 0.00000000 107.04709803 
    19467 Rotation angle (degrees) 171.29598224 
    19468 Shift along axis -63.08288941 
    19469  
    19470 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19471 
    19472 > fitmap #4 inMap #2 resolution 15 metric correlation
    19473 
    19474 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19475 using 2353 points 
    19476 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19477 steps = 28, shift = 0.0477, angle = 0.0122 degrees 
    19478  
    19479 Position of RNAFramework.pdb map 15 (#1) relative to
    19480 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19481 Matrix rotation and translation 
    19482 -0.53433679 -0.83762793 -0.11341630 193.03734566 
    19483 -0.83145816 0.54501001 -0.10789373 181.38512864 
    19484 0.15218778 0.03664940 -0.98767161 190.51548337 
    19485 Axis 0.47790673 -0.87817369 0.02039927 
    19486 Axis point 137.56893212 0.00000000 107.02972047 
    19487 Rotation angle (degrees) 171.30206045 
    19488 Shift along axis -63.14742518 
    19489  
    19490 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    19491 
    19492 > fitmap #4 inMap #2 resolution 15 metric correlation
    19493 
    19494 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19495 using 2353 points 
    19496 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19497 steps = 36, shift = 0.00453, angle = 0.0158 degrees 
    19498  
    19499 Position of RNAFramework.pdb map 15 (#1) relative to
    19500 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19501 Matrix rotation and translation 
    19502 -0.53412568 -0.83777588 -0.11331786 193.03627074 
    19503 -0.83159877 0.54478698 -0.10793639 181.38523140 
    19504 0.15216056 0.03658349 -0.98767825 190.51893210 
    19505 Axis 0.47802155 -0.87811044 0.02043174 
    19506 Axis point 137.58640562 0.00000000 107.03117965 
    19507 Rotation angle (degrees) 171.30557593 
    19508 Shift along axis -63.10813477 
    19509  
    19510 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    19511 
    19512 > fitmap #4 inMap #2 resolution 15 metric correlation
    19513 
    19514 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19515 using 2353 points 
    19516 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19517 steps = 36, shift = 0.0577, angle = 0.0399 degrees 
    19518  
    19519 Position of RNAFramework.pdb map 15 (#1) relative to
    19520 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19521 Matrix rotation and translation 
    19522 -0.53448577 -0.83749181 -0.11371908 193.08609531 
    19523 -0.83128138 0.54521616 -0.10821388 181.36496372 
    19524 0.15262968 0.03669385 -0.98760177 190.52839057 
    19525 Axis 0.47780254 -0.87822856 0.02047759 
    19526 Axis point 137.55071689 0.00000000 107.07138124 
    19527 Rotation angle (degrees) 171.27803307 
    19528 Shift along axis -63.12130133 
    19529  
    19530 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19531 
    19532 > fitmap #4 inMap #2 resolution 15 metric correlation
    19533 
    19534 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19535 using 2353 points 
    19536 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19537 steps = 36, shift = 0.00499, angle = 0.0234 degrees 
    19538  
    19539 Position of RNAFramework.pdb map 15 (#1) relative to
    19540 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19541 Matrix rotation and translation 
    19542 -0.53429253 -0.83765174 -0.11344897 193.08785663 
    19543 -0.83145621 0.54497768 -0.10807188 181.36548234 
    19544 0.15235372 0.03658594 -0.98764838 190.52203522 
    19545 Axis 0.47792287 -0.87816328 0.02046887 
    19546 Axis point 137.58419208 0.00000000 107.04851767 
    19547 Rotation angle (degrees) 171.29540182 
    19548 Shift along axis -63.08763236 
    19549  
    19550 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19551 
    19552 > fitmap #4 inMap #2 resolution 15 metric correlation
    19553 
    19554 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19555 using 2353 points 
    19556 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19557 steps = 28, shift = 0.0105, angle = 0.0142 degrees 
    19558  
    19559 Position of RNAFramework.pdb map 15 (#1) relative to
    19560 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19561 Matrix rotation and translation 
    19562 -0.53423025 -0.83765898 -0.11368850 193.08804049 
    19563 -0.83147334 0.54495240 -0.10806763 181.36821694 
    19564 0.15247860 0.03679605 -0.98762130 190.53242319 
    19565 Axis 0.47794264 -0.87815394 0.02040804 
    19566 Axis point 137.57559512 -0.00000000 107.06134088 
    19567 Rotation angle (degrees) 171.28328146 
    19568 Shift along axis -63.09581437 
    19569  
    19570 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19571 
    19572 > fitmap #4 inMap #2 resolution 15 metric correlation
    19573 
    19574 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19575 using 2353 points 
    19576 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19577 steps = 40, shift = 0.0546, angle = 0.037 degrees 
    19578  
    19579 Position of RNAFramework.pdb map 15 (#1) relative to
    19580 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19581 Matrix rotation and translation 
    19582 -0.53405143 -0.83784905 -0.11312664 193.04019920 
    19583 -0.83166807 0.54468360 -0.10792418 181.38145999 
    19584 0.15204236 0.03644684 -0.98770150 190.51502143 
    19585 Axis 0.47807123 -0.87808255 0.02046775 
    19586 Axis point 137.60339605 -0.00000000 107.02194716 
    19587 Rotation angle (degrees) 171.31551011 
    19588 Shift along axis -63.08151592 
    19589  
    19590 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    19591 
    19592 > fitmap #4 inMap #2 resolution 15 metric correlation
    19593 
    19594 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19595 using 2353 points 
    19596 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19597 steps = 36, shift = 0.0346, angle = 0.0314 degrees 
    19598  
    19599 Position of RNAFramework.pdb map 15 (#1) relative to
    19600 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19601 Matrix rotation and translation 
    19602 -0.53426108 -0.83765656 -0.11356140 193.06985037 
    19603 -0.83146737 0.54496321 -0.10805899 181.37083283 
    19604 0.15240308 0.03669097 -0.98763687 190.52302787 
    19605 Axis 0.47793364 -0.87815821 0.02043538 
    19606 Axis point 137.57286027 0.00000000 107.05129295 
    19607 Rotation angle (degrees) 171.29001161 
    19608 Shift along axis -63.10429975 
    19609  
    19610 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19611 
    19612 > fitmap #4 inMap #2 resolution 15 metric correlation
    19613 
    19614 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19615 using 2353 points 
    19616 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19617 steps = 40, shift = 0.026, angle = 0.0286 degrees 
    19618  
    19619 Position of RNAFramework.pdb map 15 (#1) relative to
    19620 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19621 Matrix rotation and translation 
    19622 -0.53456593 -0.83743143 -0.11378693 193.09150318 
    19623 -0.83121748 0.54530731 -0.10824542 181.36334665 
    19624 0.15269693 0.03671746 -0.98759050 190.52884518 
    19625 Axis 0.47775583 -0.87825393 0.02047938 
    19626 Axis point 137.54291017 0.00000000 107.07642366 
    19627 Rotation angle (degrees) 171.27382836 
    19628 Shift along axis -63.13056651 
    19629  
    19630 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19631 
    19632 > fitmap #4 inMap #2 resolution 15 metric correlation
    19633 
    19634 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19635 using 2353 points 
    19636 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19637 steps = 40, shift = 0.0135, angle = 0.0142 degrees 
    19638  
    19639 Position of RNAFramework.pdb map 15 (#1) relative to
    19640 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19641 Matrix rotation and translation 
    19642 -0.53444230 -0.83753148 -0.11363120 193.08186708 
    19643 -0.83132700 0.54515749 -0.10815897 181.36311816 
    19644 0.15253341 0.03666004 -0.98761790 190.52007005 
    19645 Axis 0.47783178 -0.87821279 0.02047175 
    19646 Axis point 137.55791359 0.00000000 107.05996007 
    19647 Rotation angle (degrees) 171.28395260 
    19648 Shift along axis -63.11447740 
    19649  
    19650 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19651 
    19652 > fitmap #4 inMap #2 resolution 15 metric correlation
    19653 
    19654 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19655 using 2353 points 
    19656 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19657 steps = 40, shift = 0.0138, angle = 0.0156 degrees 
    19658  
    19659 Position of RNAFramework.pdb map 15 (#1) relative to
    19660 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19661 Matrix rotation and translation 
    19662 -0.53425045 -0.83765843 -0.11359758 193.07511235 
    19663 -0.83147275 0.54495769 -0.10804545 181.37107613 
    19664 0.15241102 0.03673005 -0.98763419 190.52679167 
    19665 Axis 0.47793765 -0.87815637 0.02042039 
    19666 Axis point 137.57452250 0.00000000 107.05352587 
    19667 Rotation angle (degrees) 171.28853707 
    19668 Shift along axis -63.10366917 
    19669  
    19670 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19671 
    19672 > fitmap #4 inMap #2 resolution 15 metric correlation
    19673 
    19674 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19675 using 2353 points 
    19676 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19677 steps = 28, shift = 0.0284, angle = 0.0171 degrees 
    19678  
    19679 Position of RNAFramework.pdb map 15 (#1) relative to
    19680 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19681 Matrix rotation and translation 
    19682 -0.53437507 -0.83755216 -0.11379485 193.10036512 
    19683 -0.83135191 0.54511643 -0.10817444 181.36259398 
    19684 0.15263315 0.03679793 -0.98759736 190.53266938 
    19685 Axis 0.47785767 -0.87819950 0.02043725 
    19686 Axis point 137.56141123 -0.00000000 107.07337423 
    19687 Rotation angle (degrees) 171.27512716 
    19688 Shift along axis -63.10408372 
    19689  
    19690 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19691 
    19692 > fitmap #4 inMap #2 resolution 15 metric correlation
    19693 
    19694 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19695 using 2353 points 
    19696 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19697 steps = 28, shift = 0.0215, angle = 0.0163 degrees 
    19698  
    19699 Position of RNAFramework.pdb map 15 (#1) relative to
    19700 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19701 Matrix rotation and translation 
    19702 -0.53422145 -0.83767327 -0.11362456 193.08181259 
    19703 -0.83148278 0.54493452 -0.10808515 181.36670830 
    19704 0.15245795 0.03673555 -0.98762675 190.52560893 
    19705 Axis 0.47795021 -0.87814930 0.02043042 
    19706 Axis point 137.57594042 -0.00000000 107.05687749 
    19707 Rotation angle (degrees) 171.28602695 
    19708 Shift along axis -63.09103753 
    19709  
    19710 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19711 
    19712 > fitmap #4 inMap #2 resolution 15 metric correlation
    19713 
    19714 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19715 using 2353 points 
    19716 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19717 steps = 40, shift = 0.0522, angle = 0.0384 degrees 
    19718  
    19719 Position of RNAFramework.pdb map 15 (#1) relative to
    19720 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19721 Matrix rotation and translation 
    19722 -0.53400154 -0.83788854 -0.11306973 193.03578159 
    19723 -0.83170812 0.54462492 -0.10791168 181.38135954 
    19724 0.15199852 0.03641610 -0.98770939 190.51340890 
    19725 Axis 0.47810085 -0.87806630 0.02047327 
    19726 Axis point 137.60807411 -0.00000000 107.01813008 
    19727 Rotation angle (degrees) 171.31867347 
    19728 Shift along axis -63.07385445 
    19729  
    19730 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19731 
    19732 > fitmap #4 inMap #2 resolution 15 metric correlation
    19733 
    19734 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19735 using 2353 points 
    19736 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19737 steps = 40, shift = 0.00172, angle = 0.00696 degrees 
    19738  
    19739 Position of RNAFramework.pdb map 15 (#1) relative to
    19740 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19741 Matrix rotation and translation 
    19742 -0.53407571 -0.83783155 -0.11314170 193.03486098 
    19743 -0.83165008 0.54471017 -0.10792878 181.38307766 
    19744 0.15205554 0.03645225 -0.98769928 190.51320654 
    19745 Axis 0.47805755 -0.87809001 0.02046737 
    19746 Axis point 137.59865558 0.00000000 107.02177439 
    19747 Rotation angle (degrees) 171.31465259 
    19748 Shift along axis -63.08959256 
    19749  
    19750 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19751 
    19752 > fitmap #4 inMap #2 resolution 15 metric correlation
    19753 
    19754 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19755 using 2353 points 
    19756 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19757 steps = 36, shift = 0.0113, angle = 0.0158 degrees 
    19758  
    19759 Position of RNAFramework.pdb map 15 (#1) relative to
    19760 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19761 Matrix rotation and translation 
    19762 -0.53423307 -0.83770901 -0.11330598 193.04375942 
    19763 -0.83152046 0.54489408 -0.10799903 181.37948690 
    19764 0.15221148 0.03651967 -0.98767277 190.51570115 
    19765 Axis 0.47796400 -0.87814094 0.02046726 
    19766 Axis point 137.58031560 0.00000000 107.03404892 
    19767 Rotation angle (degrees) 171.30459222 
    19768 Shift along axis -63.10944934 
    19769  
    19770 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    19771 
    19772 > fitmap #4 inMap #2 resolution 15 metric correlation
    19773 
    19774 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19775 using 2353 points 
    19776 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19777 steps = 36, shift = 0.0435, angle = 0.0261 degrees 
    19778  
    19779 Position of RNAFramework.pdb map 15 (#1) relative to
    19780 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19781 Matrix rotation and translation 
    19782 -0.53441044 -0.83754979 -0.11364611 193.08207862 
    19783 -0.83134711 0.54512795 -0.10815334 181.36495827 
    19784 0.15253544 0.03668118 -0.98761680 190.52339104 
    19785 Axis 0.47784785 -0.87820421 0.02046431 
    19786 Axis point 137.55983952 -0.00000000 107.06172396 
    19787 Rotation angle (degrees) 171.28330755 
    19788 Shift along axis -63.11268504 
    19789  
    19790 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19791 
    19792 > fitmap #4 inMap #2 resolution 15 metric correlation
    19793 
    19794 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19795 using 2353 points 
    19796 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19797 steps = 40, shift = 0.0534, angle = 0.048 degrees 
    19798  
    19799 Position of RNAFramework.pdb map 15 (#1) relative to
    19800 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19801 Matrix rotation and translation 
    19802 -0.53402012 -0.83787905 -0.11305225 193.03603735 
    19803 -0.83169563 0.54464121 -0.10792576 181.37955809 
    19804 0.15200162 0.03639062 -0.98770985 190.51173641 
    19805 Axis 0.47809164 -0.87807105 0.02048447 
    19806 Axis point 137.60708031 0.00000000 107.01774605 
    19807 Rotation angle (degrees) 171.31919520 
    19808 Shift along axis -63.07269160 
    19809  
    19810 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19811 
    19812 > fitmap #4 inMap #2 resolution 15 metric correlation
    19813 
    19814 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19815 using 2353 points 
    19816 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19817 steps = 36, shift = 0.0174, angle = 0.034 degrees 
    19818  
    19819 Position of RNAFramework.pdb map 15 (#1) relative to
    19820 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19821 Matrix rotation and translation 
    19822 -0.53432534 -0.83763102 -0.11344738 193.04950390 
    19823 -0.83143427 0.54501019 -0.10807673 181.37520009 
    19824 0.15235837 0.03657599 -0.98764803 190.51481068 
    19825 Axis 0.47790560 -0.87817259 0.02047290 
    19826 Axis point 137.56570794 0.00000000 107.04425636 
    19827 Rotation angle (degrees) 171.29539382 
    19828 Shift along axis -63.11890006 
    19829  
    19830 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19831 
    19832 > fitmap #4 inMap #2 resolution 15 metric correlation
    19833 
    19834 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19835 using 2353 points 
    19836 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19837 steps = 44, shift = 0.0396, angle = 0.0275 degrees 
    19838  
    19839 Position of RNAFramework.pdb map 15 (#1) relative to
    19840 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19841 Matrix rotation and translation 
    19842 -0.53455174 -0.83744333 -0.11376603 193.08346437 
    19843 -0.83122938 0.54528988 -0.10824185 181.35985585 
    19844 0.15268184 0.03670489 -0.98759330 190.51796771 
    19845 Axis 0.47776453 -0.87824913 0.02048204 
    19846 Axis point 137.54062260 0.00000000 107.06964366 
    19847 Rotation angle (degrees) 171.27496808 
    19848 Shift along axis -63.12850882 
    19849  
    19850 Average map value = 0.6211 for 10778 atoms, 6372 outside contour 
    19851 
    19852 > fitmap #4 inMap #2 resolution 15 metric correlation
    19853 
    19854 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19855 using 2353 points 
    19856 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19857 steps = 28, shift = 0.0179, angle = 0.0309 degrees 
    19858  
    19859 Position of RNAFramework.pdb map 15 (#1) relative to
    19860 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19861 Matrix rotation and translation 
    19862 -0.53417318 -0.83770227 -0.11363769 193.07838314 
    19863 -0.83151908 0.54488711 -0.10804484 181.37046984 
    19864 0.15242908 0.03677734 -0.98762965 190.52791699 
    19865 Axis 0.47797602 -0.87813579 0.02040721 
    19866 Axis point 137.57887623 0.00000000 107.05539212 
    19867 Rotation angle (degrees) 171.28641153 
    19868 Shift along axis -63.09292096 
    19869  
    19870 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19871 
    19872 > fitmap #4 inMap #2 resolution 15 metric correlation
    19873 
    19874 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19875 using 2353 points 
    19876 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19877 steps = 36, shift = 0.00593, angle = 0.012 degrees 
    19878  
    19879 Position of RNAFramework.pdb map 15 (#1) relative to
    19880 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19881 Matrix rotation and translation 
    19882 -0.53420979 -0.83770678 -0.11343215 193.08146460 
    19883 -0.83151691 0.54489173 -0.10803823 181.36737413 
    19884 0.15231257 0.03660576 -0.98765400 190.52347794 
    19885 Axis 0.47796820 -0.87813896 0.02045409 
    19886 Axis point 137.58891185 0.00000000 107.04592693 
    19887 Rotation angle (degrees) 171.29707214 
    19888 Shift along axis -63.08197421 
    19889  
    19890 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19891 
    19892 > fitmap #4 inMap #2 resolution 15 metric correlation
    19893 
    19894 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19895 using 2353 points 
    19896 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19897 steps = 36, shift = 0.0335, angle = 0.0118 degrees 
    19898  
    19899 Position of RNAFramework.pdb map 15 (#1) relative to
    19900 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19901 Matrix rotation and translation 
    19902 -0.53418629 -0.83774742 -0.11324253 193.05071471 
    19903 -0.83156002 0.54483728 -0.10798106 181.37763141 
    19904 0.15215957 0.03648604 -0.98768201 190.51710518 
    19905 Axis 0.47799252 -0.87812530 0.02047201 
    19906 Axis point 137.59040303 0.00000000 107.03144128 
    19907 Rotation angle (degrees) 171.30824326 
    19908 Shift along axis -63.09522126 
    19909  
    19910 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    19911 
    19912 > fitmap #4 inMap #2 resolution 15 metric correlation
    19913 
    19914 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19915 using 2353 points 
    19916 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19917 steps = 40, shift = 0.00419, angle = 0.0119 degrees 
    19918  
    19919 Position of RNAFramework.pdb map 15 (#1) relative to
    19920 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19921 Matrix rotation and translation 
    19922 -0.53432366 -0.83764997 -0.11331531 193.05133732 
    19923 -0.83145166 0.54498757 -0.10805701 181.37515828 
    19924 0.15226935 0.03647887 -0.98766535 190.51501362 
    19925 Axis 0.47791425 -0.87816737 0.02049498 
    19926 Axis point 137.57463246 0.00000000 107.03857029 
    19927 Rotation angle (degrees) 171.30263818 
    19928 Shift along axis -63.11115736 
    19929  
    19930 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    19931 
    19932 > fitmap #4 inMap #2 resolution 15 metric correlation
    19933 
    19934 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19935 using 2353 points 
    19936 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19937 steps = 36, shift = 0.0413, angle = 0.0311 degrees 
    19938  
    19939 Position of RNAFramework.pdb map 15 (#1) relative to
    19940 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19941 Matrix rotation and translation 
    19942 -0.53452364 -0.83746284 -0.11375441 193.08725093 
    19943 -0.83125819 0.54525796 -0.10818137 181.36424434 
    19944 0.15262334 0.03673387 -0.98760126 190.52652087 
    19945 Axis 0.47778171 -0.87824038 0.02045657 
    19946 Axis point 137.54772289 0.00000000 107.06922469 
    19947 Rotation angle (degrees) 171.27719447 
    19948 Shift along axis -63.13032689 
    19949  
    19950 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    19951 
    19952 > fitmap #4 inMap #2 resolution 15 metric correlation
    19953 
    19954 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19955 using 2353 points 
    19956 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    19957 steps = 40, shift = 0.0574, angle = 0.037 degrees 
    19958  
    19959 Position of RNAFramework.pdb map 15 (#1) relative to
    19960 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19961 Matrix rotation and translation 
    19962 -0.53419946 -0.83772840 -0.11332113 193.03677708 
    19963 -0.83154009 0.54486321 -0.10800374 181.38215380 
    19964 0.15222228 0.03653561 -0.98767051 190.51696887 
    19965 Axis 0.47798067 -0.87813193 0.02046428 
    19966 Axis point 137.57873798 0.00000000 107.03535415 
    19967 Rotation angle (degrees) 171.30364595 
    19968 Shift along axis -63.11081864 
    19969  
    19970 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    19971 
    19972 > fitmap #4 inMap #2 resolution 15 metric correlation
    19973 
    19974 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19975 using 2353 points 
    19976 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19977 steps = 28, shift = 0.0756, angle = 0.0664 degrees 
    19978  
    19979 Position of RNAFramework.pdb map 15 (#1) relative to
    19980 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    19981 Matrix rotation and translation 
    19982 -0.53484315 -0.83722234 -0.11402265 193.09740620 
    19983 -0.83100109 0.54562156 -0.10832327 181.34873371 
    19984 0.15290384 0.03681708 -0.98755477 190.51351915 
    19985 Axis 0.47759512 -0.87834152 0.02047148 
    19986 Axis point 137.50870832 0.00000000 107.08241435 
    19987 Rotation angle (degrees) 171.26009938 
    19988 Shift along axis -63.16364926 
    19989  
    19990 Average map value = 0.6211 for 10778 atoms, 6374 outside contour 
    19991 
    19992 > fitmap #4 inMap #2 resolution 15 metric correlation
    19993 
    19994 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    19995 using 2353 points 
    19996 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    19997 steps = 28, shift = 0.0195, angle = 0.0285 degrees 
    19998  
    19999 Position of RNAFramework.pdb map 15 (#1) relative to
    20000 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20001 Matrix rotation and translation 
    20002 -0.53451459 -0.83746457 -0.11378421 193.10667482 
    20003 -0.83125479 0.54525506 -0.10822212 181.35855748 
    20004 0.15267357 0.03673745 -0.98759336 190.52777296 
    20005 Axis 0.47778362 -0.87823909 0.02046732 
    20006 Axis point 137.55353259 0.00000000 107.07436920 
    20007 Rotation angle (degrees) 171.27454058 
    20008 Shift along axis -63.11337667 
    20009  
    20010 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20011 
    20012 > fitmap #4 inMap #2 resolution 15 metric correlation
    20013 
    20014 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20015 using 2353 points 
    20016 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20017 steps = 28, shift = 0.079, angle = 0.0625 degrees 
    20018  
    20019 Position of RNAFramework.pdb map 15 (#1) relative to
    20020 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20021 Matrix rotation and translation 
    20022 -0.53396496 -0.83790772 -0.11310030 193.03954088 
    20023 -0.83173962 0.54459069 -0.10784161 181.38869293 
    20024 0.15195465 0.03648644 -0.98771354 190.52387989 
    20025 Axis 0.47812046 -0.87805655 0.02043327 
    20026 Axis point 137.61440924 0.00000000 107.01941960 
    20027 Rotation angle (degrees) 171.31901526 
    20028 Shift along axis -63.08035045 
    20029  
    20030 Average map value = 0.621 for 10778 atoms, 6374 outside contour 
    20031 
    20032 > fitmap #4 inMap #2 resolution 15 metric correlation
    20033 
    20034 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20035 using 2353 points 
    20036 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20037 steps = 40, shift = 0.0132, angle = 0.0097 degrees 
    20038  
    20039 Position of RNAFramework.pdb map 15 (#1) relative to
    20040 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20041 Matrix rotation and translation 
    20042 -0.53406889 -0.83783556 -0.11314418 193.04554834 
    20043 -0.83165420 0.54470379 -0.10792918 181.38034449 
    20044 0.15205694 0.03645530 -0.98769895 190.51709199 
    20045 Axis 0.47806098 -0.87808816 0.02046666 
    20046 Axis point 137.60339708 0.00000000 107.02409694 
    20047 Rotation angle (degrees) 171.31450607 
    20048 Shift along axis -63.08114128 
    20049  
    20050 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    20051 
    20052 > fitmap #4 inMap #2 resolution 15 metric correlation
    20053 
    20054 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20055 using 2353 points 
    20056 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20057 steps = 40, shift = 0.00743, angle = 0.029 degrees 
    20058  
    20059 Position of RNAFramework.pdb map 15 (#1) relative to
    20060 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20061 Matrix rotation and translation 
    20062 -0.53428654 -0.83764308 -0.11354106 193.05001599 
    20063 -0.83146010 0.54498361 -0.10801204 181.37839838 
    20064 0.15235352 0.03669557 -0.98764435 190.51894431 
    20065 Axis 0.47792279 -0.87816446 0.02042041 
    20066 Axis point 137.56605848 0.00000000 107.04463853 
    20067 Rotation angle (degrees) 171.29238078 
    20068 Shift along axis -63.12658712 
    20069  
    20070 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20071 
    20072 > fitmap #4 inMap #2 resolution 15 metric correlation
    20073 
    20074 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20075 using 2353 points 
    20076 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20077 steps = 40, shift = 0.0102, angle = 0.0145 degrees 
    20078  
    20079 Position of RNAFramework.pdb map 15 (#1) relative to
    20080 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20081 Matrix rotation and translation 
    20082 -0.53435080 -0.83763168 -0.11332251 193.04835046 
    20083 -0.83142409 0.54501781 -0.10811659 181.37277094 
    20084 0.15232464 0.03644697 -0.98765801 190.51102907 
    20085 Axis 0.47789785 -0.87817568 0.02052104 
    20086 Axis point 137.56861181 -0.00000000 107.04114475 
    20087 Rotation angle (degrees) 171.30065880 
    20088 Shift along axis -63.11028105 
    20089  
    20090 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20091 
    20092 > fitmap #4 inMap #2 resolution 15 metric correlation
    20093 
    20094 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20095 using 2353 points 
    20096 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20097 steps = 40, shift = 0.0277, angle = 0.0173 degrees 
    20098  
    20099 Position of RNAFramework.pdb map 15 (#1) relative to
    20100 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20101 Matrix rotation and translation 
    20102 -0.53422280 -0.83769540 -0.11345494 193.07270081 
    20103 -0.83152697 0.54490312 -0.10790330 181.37776151 
    20104 0.15221201 0.03669652 -0.98766613 190.52318558 
    20105 Axis 0.47796414 -0.87814267 0.02038930 
    20106 Axis point 137.58942630 0.00000000 107.03642735 
    20107 Rotation angle (degrees) 171.29967589 
    20108 Shift along axis -63.10908954 
    20109  
    20110 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    20111 
    20112 > fitmap #4 inMap #2 resolution 15 metric correlation
    20113 
    20114 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20115 using 2353 points 
    20116 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20117 steps = 44, shift = 0.0218, angle = 0.0141 degrees 
    20118  
    20119 Position of RNAFramework.pdb map 15 (#1) relative to
    20120 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20121 Matrix rotation and translation 
    20122 -0.53428554 -0.83763711 -0.11358975 193.08970146 
    20123 -0.83144598 0.54499246 -0.10807607 181.36538598 
    20124 0.15243405 0.03670034 -0.98763174 190.52768873 
    20125 Axis 0.47791875 -0.87816626 0.02043745 
    20126 Axis point 137.57739236 0.00000000 107.05636427 
    20127 Rotation angle (degrees) 171.28813424 
    20128 Shift along axis -63.09387309 
    20129  
    20130 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20131 
    20132 > fitmap #4 inMap #2 resolution 15 metric correlation
    20133 
    20134 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20135 using 2353 points 
    20136 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20137 steps = 28, shift = 0.0836, angle = 0.08 degrees 
    20138  
    20139 Position of RNAFramework.pdb map 15 (#1) relative to
    20140 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20141 Matrix rotation and translation 
    20142 -0.53341255 -0.83830889 -0.11273361 193.02054919 
    20143 -0.83208486 0.54399834 -0.10816758 181.39106689 
    20144 0.15200470 0.03610607 -0.98771982 190.51226250 
    20145 Axis 0.47842024 -0.87788843 0.02063925 
    20146 Axis point 137.65286112 0.00000000 107.02497294 
    20147 Rotation angle (degrees) 171.32779230 
    20148 Shift along axis -62.96414970 
    20149  
    20150 Average map value = 0.621 for 10778 atoms, 6374 outside contour 
    20151 
    20152 > fitmap #4 inMap #2 resolution 15 metric correlation
    20153 
    20154 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20155 using 2353 points 
    20156 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20157 steps = 28, shift = 0.0979, angle = 0.107 degrees 
    20158  
    20159 Position of RNAFramework.pdb map 15 (#1) relative to
    20160 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20161 Matrix rotation and translation 
    20162 -0.53463785 -0.83739113 -0.11374566 193.09759396 
    20163 -0.83116265 0.54537527 -0.10832401 181.35112888 
    20164 0.15274360 0.03662711 -0.98758664 190.51557860 
    20165 Axis 0.47771800 -0.87827339 0.02052730 
    20166 Axis point 137.53828943 0.00000000 107.07423288 
    20167 Rotation angle (degrees) 171.27384538 
    20168 Shift along axis -63.11890471 
    20169  
    20170 Average map value = 0.621 for 10778 atoms, 6373 outside contour 
    20171 
    20172 > fitmap #4 inMap #2 resolution 15 metric correlation
    20173 
    20174 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20175 using 2353 points 
    20176 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20177 steps = 40, shift = 0.0307, angle = 0.0457 degrees 
    20178  
    20179 Position of RNAFramework.pdb map 15 (#1) relative to
    20180 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20181 Matrix rotation and translation 
    20182 -0.53415102 -0.83774804 -0.11340420 193.07847112 
    20183 -0.83156273 0.54482797 -0.10800712 181.36793783 
    20184 0.15226850 0.03661067 -0.98766061 190.52238509 
    20185 Axis 0.47800146 -0.87812108 0.02044413 
    20186 Axis point 137.59402716 0.00000000 107.04198659 
    20187 Rotation angle (degrees) 171.29927059 
    20188 Shift along axis -63.07615369 
    20189  
    20190 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    20191 
    20192 > fitmap #4 inMap #2 resolution 15 metric correlation
    20193 
    20194 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20195 using 2353 points 
    20196 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20197 steps = 36, shift = 0.0108, angle = 0.0121 degrees 
    20198  
    20199 Position of RNAFramework.pdb map 15 (#1) relative to
    20200 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20201 Matrix rotation and translation 
    20202 -0.53429384 -0.83764691 -0.11347844 193.08777033 
    20203 -0.83145169 0.54498367 -0.10807651 181.36562836 
    20204 0.15237382 0.03660731 -0.98764449 190.52294996 
    20205 Axis 0.47792045 -0.87816472 0.02046409 
    20206 Axis point 137.58228825 0.00000000 107.05029950 
    20207 Rotation angle (degrees) 171.29378027 
    20208 Shift along axis -63.08942318 
    20209  
    20210 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20211 
    20212 > fitmap #4 inMap #2 resolution 15 metric correlation
    20213 
    20214 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20215 using 2353 points 
    20216 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20217 steps = 28, shift = 0.00998, angle = 0.013 degrees 
    20218  
    20219 Position of RNAFramework.pdb map 15 (#1) relative to
    20220 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20221 Matrix rotation and translation 
    20222 -0.53422314 -0.83766307 -0.11369182 193.08647229 
    20223 -0.83147830 0.54494568 -0.10806327 181.36892385 
    20224 0.15247644 0.03680247 -0.98762140 190.53239049 
    20225 Axis 0.47794631 -0.87815201 0.02040500 
    20226 Axis point 137.57542776 0.00000000 107.06106903 
    20227 Rotation angle (degrees) 171.28322432 
    20228 Shift along axis -63.09670370 
    20229  
    20230 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20231 
    20232 > fitmap #4 inMap #2 resolution 15 metric correlation
    20233 
    20234 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20235 using 2353 points 
    20236 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20237 steps = 40, shift = 0.0582, angle = 0.042 degrees 
    20238  
    20239 Position of RNAFramework.pdb map 15 (#1) relative to
    20240 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20241 Matrix rotation and translation 
    20242 -0.53399427 -0.83789350 -0.11306730 193.03568549 
    20243 -0.83171447 0.54461700 -0.10790269 181.38212730 
    20244 0.15198930 0.03642037 -0.98771065 190.51356565 
    20245 Axis 0.47810506 -0.87806409 0.02046951 
    20246 Axis point 137.60912396 0.00000000 107.01746633 
    20247 Rotation angle (degrees) 171.31903602 
    20248 Shift along axis -63.07407440 
    20249  
    20250 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    20251 
    20252 > fitmap #4 inMap #2 resolution 15 metric correlation
    20253 
    20254 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20255 using 2353 points 
    20256 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20257 steps = 36, shift = 0.0573, angle = 0.0466 degrees 
    20258  
    20259 Position of RNAFramework.pdb map 15 (#1) relative to
    20260 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20261 Matrix rotation and translation 
    20262 -0.53438846 -0.83756614 -0.11362897 193.08510766 
    20263 -0.83136760 0.54510243 -0.10812440 181.36554435 
    20264 0.15250073 0.03668710 -0.98762194 190.52632177 
    20265 Axis 0.47786118 -0.87819719 0.02045444 
    20266 Axis point 137.56469303 -0.00000000 107.06054804 
    20267 Rotation angle (degrees) 171.28494854 
    20268 Shift along axis -63.10972456 
    20269  
    20270 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20271 
    20272 > fitmap #4 inMap #2 resolution 15 metric correlation
    20273 
    20274 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20275 using 2353 points 
    20276 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20277 steps = 40, shift = 0.056, angle = 0.0451 degrees 
    20278  
    20279 Position of RNAFramework.pdb map 15 (#1) relative to
    20280 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20281 Matrix rotation and translation 
    20282 -0.53400853 -0.83788206 -0.11308470 193.03674866 
    20283 -0.83170224 0.54463411 -0.10791066 181.38192361 
    20284 0.15200616 0.03642767 -0.98770778 190.51389259 
    20285 Axis 0.47809641 -0.87806880 0.02046962 
    20286 Axis point 137.60743026 0.00000000 107.01884482 
    20287 Rotation angle (degrees) 171.31795207 
    20288 Shift along axis -63.07588502 
    20289  
    20290 Average map value = 0.621 for 10778 atoms, 6372 outside contour 
    20291 
    20292 > fitmap #4 inMap #2 resolution 15 metric correlation
    20293 
    20294 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20295 using 2353 points 
    20296 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20297 steps = 36, shift = 0.0393, angle = 0.0359 degrees 
    20298  
    20299 Position of RNAFramework.pdb map 15 (#1) relative to
    20300 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20301 Matrix rotation and translation 
    20302 -0.53429104 -0.83764090 -0.11353595 193.07012742 
    20303 -0.83144644 0.54499000 -0.10808493 181.36823679 
    20304 0.15241228 0.03665033 -0.98763696 190.51950655 
    20305 Axis 0.47791854 -0.87816598 0.02045424 
    20306 Axis point 137.57106069 0.00000000 107.05059826 
    20307 Rotation angle (degrees) 171.29062558 
    20308 Shift along axis -63.10269120 
    20309  
    20310 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    20311 
    20312 > fitmap #4 inMap #2 resolution 15 metric correlation
    20313 
    20314 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20315 using 2353 points 
    20316 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    20317 steps = 44, shift = 0.337, angle = 0.241 degrees 
    20318  
    20319 Position of RNAFramework.pdb map 15 (#1) relative to
    20320 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20321 Matrix rotation and translation 
    20322 0.49535462 0.86162871 -0.11054133 190.61195681 
    20323 0.67146087 -0.46051048 -0.58057734 199.42255838 
    20324 -0.55114757 0.21336745 -0.80666612 184.19746072 
    20325 Axis 0.85581132 0.47493959 -0.20498628 
    20326 Axis point 0.00000000 13.86864226 128.56314159 
    20327 Rotation angle (degrees) 152.36384948 
    20328 Shift along axis 220.08358560 
    20329  
    20330 Average map value = 0.6806 for 10778 atoms, 5984 outside contour 
    20331 
    20332 > fitmap #4 inMap #2 resolution 15 metric correlation
    20333 
    20334 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20335 using 2353 points 
    20336 correlation = 0.5907, correlation about mean = 0.3438, overlap = 279.1 
    20337 steps = 40, shift = 0.0324, angle = 0.0146 degrees 
    20338  
    20339 Position of RNAFramework.pdb map 15 (#1) relative to
    20340 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20341 Matrix rotation and translation 
    20342 0.49549815 0.86157210 -0.11033914 190.58306337 
    20343 0.67146281 -0.46051656 -0.58057028 199.43320787 
    20344 -0.55101618 0.21358282 -0.80669888 184.19337537 
    20345 Axis 0.85585144 0.47491356 -0.20487902 
    20346 Axis point 0.00000000 13.88477110 128.54942719 
    20347 Rotation angle (degrees) 152.35738480 
    20348 Shift along axis 220.08696636 
    20349  
    20350 Average map value = 0.6806 for 10778 atoms, 5983 outside contour 
    20351 
    20352 > fitmap #4 inMap #2 resolution 15 metric correlation
    20353 
    20354 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20355 using 2353 points 
    20356 correlation = 0.5738, correlation about mean = 0.3382, overlap = 268 
    20357 steps = 40, shift = 1.19, angle = 1.14 degrees 
    20358  
    20359 Position of RNAFramework.pdb map 15 (#1) relative to
    20360 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20361 Matrix rotation and translation 
    20362 -0.49215113 -0.84728133 0.19975292 185.85957607 
    20363 -0.72055547 0.52525949 0.45266095 169.55566703 
    20364 -0.48845341 0.07884463 -0.86902033 188.86940022 
    20365 Axis -0.47117897 0.86745372 0.15973235 
    20366 Axis point 159.78719221 0.00000000 51.62942566 
    20367 Rotation angle (degrees) 156.62908660 
    20368 Shift along axis 89.67712291 
    20369  
    20370 Average map value = 0.6536 for 10778 atoms, 6075 outside contour 
    20371 
    20372 > fitmap #4 inMap #2 resolution 15 metric correlation
    20373 
    20374 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20375 using 2353 points 
    20376 correlation = 0.5738, correlation about mean = 0.3382, overlap = 268 
    20377 steps = 44, shift = 0.0138, angle = 0.00919 degrees 
    20378  
    20379 Position of RNAFramework.pdb map 15 (#1) relative to
    20380 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20381 Matrix rotation and translation 
    20382 -0.49214813 -0.84729204 0.19971489 185.86650803 
    20383 -0.72064369 0.52525054 0.45253088 169.54942286 
    20384 -0.48832629 0.07878905 -0.86909681 188.88064864 
    20385 Axis -0.47119837 0.86745410 0.15967306 
    20386 Axis point 159.78776548 0.00000000 51.64874152 
    20387 Rotation angle (degrees) 156.63503918 
    20388 Shift along axis 89.65549533 
    20389  
    20390 Average map value = 0.6536 for 10778 atoms, 6076 outside contour 
    20391 
    20392 > fitmap #4 inMap #2 resolution 15 metric correlation
    20393 
    20394 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20395 using 2353 points 
    20396 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20397 steps = 40, shift = 0.574, angle = 0.626 degrees 
    20398  
    20399 Position of RNAFramework.pdb map 15 (#1) relative to
    20400 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20401 Matrix rotation and translation 
    20402 -0.53420938 -0.83769019 -0.11355659 193.07058148 
    20403 -0.83150583 0.54491011 -0.10803091 181.37174889 
    20404 0.15237452 0.03671193 -0.98764052 190.52469034 
    20405 Axis 0.47796188 -0.87814315 0.02042165 
    20406 Axis point 137.57797685 0.00000000 107.04986103 
    20407 Rotation angle (degrees) 171.29096245 
    20408 Shift along axis -63.09915262 
    20409  
    20410 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    20411 
    20412 > fitmap #4 inMap #2 resolution 15 metric correlation
    20413 
    20414 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20415 using 2353 points 
    20416 correlation = 0.5458, correlation about mean = 0.2643, overlap = 254.5 
    20417 steps = 44, shift = 0.0427, angle = 0.03 degrees 
    20418  
    20419 Position of RNAFramework.pdb map 15 (#1) relative to
    20420 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20421 Matrix rotation and translation 
    20422 -0.53407485 -0.83783922 -0.11308897 193.03321112 
    20423 -0.83165510 0.54470146 -0.10793415 181.38200177 
    20424 0.15203114 0.03640619 -0.98770475 190.51112837 
    20425 Axis 0.47806072 -0.87808794 0.02048206 
    20426 Axis point 137.60043610 0.00000000 107.01930863 
    20427 Rotation angle (degrees) 171.31717752 
    20428 Shift along axis -63.08569084 
    20429  
    20430 Average map value = 0.621 for 10778 atoms, 6371 outside contour 
    20431 
    20432 > select add #1
    20433 
    20434 2 models selected 
    20435 
    20436 > select subtract #1
    20437 
    20438 Nothing selected 
    20439 
    20440 > select add #4
    20441 
    20442 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    20443 
    20444 > view matrix models
    20445 > #4,0.11164,-0.34466,0.93206,794.58,-0.96195,0.19787,0.18839,-326.28,-0.24936,-0.91763,-0.30946,361.91
    20446 
    20447 > fitmap #4 inMap #2 resolution 15 metric correlation
    20448 
    20449 Fit map RNAFramework.pdb map 15 in map cryosparc_P12_J2773_004_volume_map.mrc
    20450 using 2353 points 
    20451 correlation = 0.5458, correlation about mean = 0.2644, overlap = 254.5 
    20452 steps = 52, shift = 7.05, angle = 0.0234 degrees 
    20453  
    20454 Position of RNAFramework.pdb map 15 (#1) relative to
    20455 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20456 Matrix rotation and translation 
    20457 -0.53418288 -0.83772126 -0.11345202 193.08607997 
    20458 -0.83153736 0.54486688 -0.10800629 181.36637483 
    20459 0.15229537 0.03664457 -0.98765523 190.52462277 
    20460 Axis 0.47798220 -0.87813180 0.02043399 
    20461 Axis point 137.59258411 0.00000000 107.04485658 
    20462 Rotation angle (degrees) 171.29691267 
    20463 Shift along axis -63.07869342 
    20464  
    20465 Average map value = 0.621 for 10778 atoms, 6370 outside contour 
    20466 
    20467 > view matrix models
    20468 > #4,0.11134,-0.34493,0.932,794.93,-0.96197,0.19798,0.18819,-326.22,-0.24943,-0.91751,-0.30977,361.79
    20469 
    20470 > fitmap #4 inMap #2
    20471 
    20472 Fit molecule RNAFramework.pdb (#4) to map
    20473 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20474 average map value = 0.6226, steps = 56 
    20475 shifted from previous position = 6.36 
    20476 rotated from previous position = 0.949 degrees 
    20477 atoms outside contour = 6385, contour level = 0.31215 
    20478  
    20479 Position of RNAFramework.pdb (#4) relative to
    20480 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20481 Matrix rotation and translation 
    20482 -0.53190292 -0.83704389 -0.12820463 193.24700721 
    20483 -0.83033860 0.54525913 -0.11502149 181.21356652 
    20484 0.16618274 0.04527308 -0.98505492 189.42969289 
    20485 Axis 0.47811174 -0.87807128 0.01999992 
    20486 Axis point 136.79314203 0.00000000 107.51392871 
    20487 Rotation angle (degrees) 170.34977617 
    20488 Shift along axis -62.93618704 
    20489  
    20490 
    20491 > view matrix models
    20492 > #4,0.09844,-0.3529,0.93047,796.47,-0.96468,0.19575,0.1763,-328.48,-0.24435,-0.91496,-0.32117,362.36
    20493 
    20494 > fitmap #4 inMap #2
    20495 
    20496 Fit molecule RNAFramework.pdb (#4) to map
    20497 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20498 average map value = 0.6226, steps = 56 
    20499 shifted from previous position = 8.01 
    20500 rotated from previous position = 0.0179 degrees 
    20501 atoms outside contour = 6388, contour level = 0.31215 
    20502  
    20503 Position of RNAFramework.pdb (#4) relative to
    20504 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20505 Matrix rotation and translation 
    20506 -0.53169311 -0.83715480 -0.12835074 193.25224117 
    20507 -0.83047804 0.54507030 -0.11490977 181.22369450 
    20508 0.16615740 0.04549583 -0.98504893 189.44546918 
    20509 Axis 0.47821674 -0.87801624 0.01990540 
    20510 Axis point 136.80700667 0.00000000 107.51855505 
    20511 Rotation angle (degrees) 170.34516858 
    20512 Shift along axis -62.92990353 
    20513  
    20514 
    20515 > view matrix models
    20516 > #4,0.098542,-0.35305,0.9304,794.71,-0.96472,0.19547,0.17635,-327.08,-0.24412,-0.91496,-0.32133,362.64
    20517 
    20518 > color zone #2 near sel & #4 distance 17.8
    20519 
    20520 > undo
    20521 
    20522 > fitmap #4 inMap #2
    20523 
    20524 Fit molecule RNAFramework.pdb (#4) to map
    20525 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20526 average map value = 0.6226, steps = 52 
    20527 shifted from previous position = 6.05 
    20528 rotated from previous position = 0.0702 degrees 
    20529 atoms outside contour = 6393, contour level = 0.31215 
    20530  
    20531 Position of RNAFramework.pdb (#4) relative to
    20532 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20533 Matrix rotation and translation 
    20534 -0.53089169 -0.83757954 -0.12889588 193.25725059 
    20535 -0.83102426 0.54434298 -0.11440748 181.26800321 
    20536 0.16598889 0.04637771 -0.98503622 189.51079741 
    20537 Axis 0.47862090 -0.87780479 0.01951359 
    20538 Axis point 136.85689145 0.00000000 107.53222240 
    20539 Rotation angle (degrees) 170.33035193 
    20540 Shift along axis -62.92292655 
    20541  
    20542 
    20543 > fitmap #4 inMap #2
    20544 
    20545 Fit molecule RNAFramework.pdb (#4) to map
    20546 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20547 average map value = 0.6226, steps = 40 
    20548 shifted from previous position = 0.0431 
    20549 rotated from previous position = 0.0382 degrees 
    20550 atoms outside contour = 6392, contour level = 0.31215 
    20551  
    20552 Position of RNAFramework.pdb (#4) relative to
    20553 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20554 Matrix rotation and translation 
    20555 -0.53122800 -0.83735074 -0.12899677 193.29376853 
    20556 -0.83071752 0.54471496 -0.11486372 181.25352503 
    20557 0.16644765 0.04614114 -0.98496991 189.50375859 
    20558 Axis 0.47842325 -0.87790813 0.01971050 
    20559 Axis point 136.82922571 0.00000000 107.56771628 
    20560 Rotation angle (degrees) 170.31297517 
    20561 Shift along axis -62.91249648 
    20562  
    20563 
    20564 > fitmap #4 inMap #2
    20565 
    20566 Fit molecule RNAFramework.pdb (#4) to map
    20567 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20568 average map value = 0.6226, steps = 28 
    20569 shifted from previous position = 0.122 
    20570 rotated from previous position = 0.113 degrees 
    20571 atoms outside contour = 6394, contour level = 0.31215 
    20572  
    20573 Position of RNAFramework.pdb (#4) relative to
    20574 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20575 Matrix rotation and translation 
    20576 -0.52995005 -0.83804600 -0.12973618 193.31287857 
    20577 -0.83162013 0.54352752 -0.11395372 181.32047194 
    20578 0.16601360 0.04750153 -0.98497850 189.59861916 
    20579 Axis 0.47907878 -0.87756479 0.01906718 
    20580 Axis point 136.92454516 -0.00000000 107.57251801 
    20581 Rotation angle (degrees) 170.29903562 
    20582 Shift along axis -62.89325427 
    20583  
    20584 
    20585 > fitmap #4 inMap #2
    20586 
    20587 Fit molecule RNAFramework.pdb (#4) to map
    20588 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20589 average map value = 0.6226, steps = 40 
    20590 shifted from previous position = 0.0201 
    20591 rotated from previous position = 0.0165 degrees 
    20592 atoms outside contour = 6394, contour level = 0.31215 
    20593  
    20594 Position of RNAFramework.pdb (#4) relative to
    20595 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20596 Matrix rotation and translation 
    20597 -0.52978157 -0.83816427 -0.12966018 193.29427727 
    20598 -0.83176399 0.54334009 -0.11379750 181.32256783 
    20599 0.16583053 0.04755894 -0.98500657 189.59584147 
    20600 Axis 0.47917684 -0.87751256 0.01900678 
    20601 Axis point 136.93631002 0.00000000 107.55597960 
    20602 Rotation angle (degrees) 170.30703303 
    20603 Shift along axis -62.88708304 
    20604  
    20605 
    20606 > fitmap #4 inMap #2
    20607 
    20608 Fit molecule RNAFramework.pdb (#4) to map
    20609 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20610 average map value = 0.6226, steps = 36 
    20611 shifted from previous position = 0.0414 
    20612 rotated from previous position = 0.0344 degrees 
    20613 atoms outside contour = 6394, contour level = 0.31215 
    20614  
    20615 Position of RNAFramework.pdb (#4) relative to
    20616 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20617 Matrix rotation and translation 
    20618 -0.52938667 -0.83838035 -0.12987592 193.28437128 
    20619 -0.83204256 0.54297091 -0.11352285 181.34468762 
    20620 0.16569414 0.04796490 -0.98500983 189.62636808 
    20621 Axis 0.47937977 -0.87740588 0.01881388 
    20622 Axis point 136.95872688 -0.00000000 107.55754702 
    20623 Rotation angle (degrees) 170.30321457 
    20624 Shift along axis -62.88867039 
    20625  
    20626 
    20627 > view matrix models
    20628 > #4,0.099848,-0.35466,0.92965,794.25,-0.96521,0.1924,0.17707,-327.37,-0.24167,-0.91499,-0.32311,364.41
    20629 
    20630 > fitmap #4 inMap #2
    20631 
    20632 Fit molecule RNAFramework.pdb (#4) to map
    20633 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20634 average map value = 0.6226, steps = 68 
    20635 shifted from previous position = 5.22 
    20636 rotated from previous position = 0.203 degrees 
    20637 atoms outside contour = 6389, contour level = 0.31215 
    20638  
    20639 Position of RNAFramework.pdb (#4) relative to
    20640 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20641 Matrix rotation and translation 
    20642 -0.53173684 -0.83713082 -0.12832590 193.25510142 
    20643 -0.83044856 0.54511055 -0.11493188 181.22106584 
    20644 0.16616478 0.04545464 -0.98504959 189.44175652 
    20645 Axis 0.47819455 -0.87802792 0.01992326 
    20646 Axis point 136.80569671 -0.00000000 107.51760880 
    20647 Rotation angle (degrees) 170.34587574 
    20648 Shift along axis -62.92932183 
    20649  
    20650 
    20651 > vop gaussian #2 sdev 8.88
    20652 
    20653 Opened cryosparc_P12_J2773_004_volume_map.mrc gaussian as #5, grid size
    20654 128,128,128, pixel 2.96, shown at step 1, values float32 
    20655 
    20656 > undo
    20657 
    20658 [Repeated 5 time(s)]
    20659 
    20660 > close #5
    20661 
    20662 > show #!2 models
    20663 
    20664 > fitmap #4 inMap #2
    20665 
    20666 Fit molecule RNAFramework.pdb (#4) to map
    20667 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20668 average map value = 0.6226, steps = 44 
    20669 shifted from previous position = 0.962 
    20670 rotated from previous position = 1.03 degrees 
    20671 atoms outside contour = 6395, contour level = 0.31215 
    20672  
    20673 Position of RNAFramework.pdb (#4) relative to
    20674 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20675 Matrix rotation and translation 
    20676 -0.52914486 -0.83856373 -0.12967738 193.24722886 
    20677 -0.83226637 0.54268456 -0.11325109 181.34890410 
    20678 0.16534213 0.04799998 -0.98506727 189.61838733 
    20679 Axis 0.47952738 -0.87732707 0.01872702 
    20680 Axis point 136.97742982 0.00000000 107.52488922 
    20681 Rotation angle (degrees) 170.32057303 
    20682 Shift along axis -62.88397659 
    20683  
    20684 
    20685 > select add #4
    20686 
    20687 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    20688 
    20689 > view matrix models
    20690 > #4,0.10029,-0.3546,0.92962,792.67,-0.96521,0.19208,0.17739,-325.87,-0.24146,-0.91507,-0.32301,364.3
    20691 
    20692 > fitmap #4 inMap #2
    20693 
    20694 Fit molecule RNAFramework.pdb (#4) to map
    20695 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20696 average map value = 0.6226, steps = 52 
    20697 shifted from previous position = 3.55 
    20698 rotated from previous position = 0.175 degrees 
    20699 atoms outside contour = 6391, contour level = 0.31215 
    20700  
    20701 Position of RNAFramework.pdb (#4) relative to
    20702 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20703 Matrix rotation and translation 
    20704 -0.53120309 -0.83742956 -0.12858704 193.25224617 
    20705 -0.83082795 0.54460800 -0.11457181 181.25639005 
    20706 0.16597531 0.04597290 -0.98505748 189.47200844 
    20707 Axis 0.47847078 -0.87788303 0.01967475 
    20708 Axis point 136.84453472 0.00000000 107.51472475 
    20709 Rotation angle (degrees) 170.34189502 
    20710 Shift along axis -62.92854182 
    20711  
    20712 
    20713 > ui mousemode right "rotate selected models"
    20714 
    20715 > view matrix models
    20716 > #4,0.12275,-0.52685,0.84105,787.07,-0.88557,0.3244,0.33246,-324.1,-0.448,-0.78562,-0.42674,364.9
    20717 
    20718 > fitmap #4 inMap #2
    20719 
    20720 Fit molecule RNAFramework.pdb (#4) to map
    20721 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20722 average map value = 0.6226, steps = 76 
    20723 shifted from previous position = 3.5 
    20724 rotated from previous position = 16.1 degrees 
    20725 atoms outside contour = 6395, contour level = 0.31215 
    20726  
    20727 Position of RNAFramework.pdb (#4) relative to
    20728 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20729 Matrix rotation and translation 
    20730 -0.52910670 -0.83858293 -0.12970890 193.24033137 
    20731 -0.83228718 0.54265207 -0.11325382 181.35107916 
    20732 0.16535948 0.04803179 -0.98506281 189.61962927 
    20733 Axis 0.47954537 -0.87731741 0.01871893 
    20734 Axis point 136.97519165 0.00000000 107.52652574 
    20735 Rotation angle (degrees) 170.31884619 
    20736 Shift along axis -62.88547644 
    20737  
    20738 
    20739 > fitmap #4 inMap #2
    20740 
    20741 Fit molecule RNAFramework.pdb (#4) to map
    20742 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20743 average map value = 0.6226, steps = 40 
    20744 shifted from previous position = 0.111 
    20745 rotated from previous position = 0.11 degrees 
    20746 atoms outside contour = 6395, contour level = 0.31215 
    20747  
    20748 Position of RNAFramework.pdb (#4) relative to
    20749 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20750 Matrix rotation and translation 
    20751 -0.53037666 -0.83783796 -0.12933592 193.28646569 
    20752 -0.83134087 0.54389704 -0.11422798 181.29135134 
    20753 0.16604992 0.04693848 -0.98499937 189.55134496 
    20754 Axis 0.47887030 -0.87767338 0.01930466 
    20755 Axis point 136.89110691 0.00000000 107.55483250 
    20756 Rotation angle (degrees) 170.31229878 
    20757 Shift along axis -62.89622149 
    20758  
    20759 
    20760 > fitmap #4 inMap #2
    20761 
    20762 Fit molecule RNAFramework.pdb (#4) to map
    20763 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20764 average map value = 0.6226, steps = 40 
    20765 shifted from previous position = 0.105 
    20766 rotated from previous position = 0.0954 degrees 
    20767 atoms outside contour = 6393, contour level = 0.31215 
    20768  
    20769 Position of RNAFramework.pdb (#4) relative to
    20770 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20771 Matrix rotation and translation 
    20772 -0.52926826 -0.83844308 -0.12995359 193.28720234 
    20773 -0.83211429 0.54286534 -0.11350194 181.34857492 
    20774 0.16571217 0.04806335 -0.98500200 189.63353006 
    20775 Axis 0.47943778 -0.87737490 0.01878039 
    20776 Axis point 136.96502607 -0.00000000 107.56220773 
    20777 Rotation angle (degrees) 170.29969884 
    20778 Shift along axis -62.88011042 
    20779  
    20780 
    20781 > fitmap #4 inMap #2
    20782 
    20783 Fit molecule RNAFramework.pdb (#4) to map
    20784 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20785 average map value = 0.6226, steps = 44 
    20786 shifted from previous position = 0.0195 
    20787 rotated from previous position = 0.0142 degrees 
    20788 atoms outside contour = 6392, contour level = 0.31215 
    20789  
    20790 Position of RNAFramework.pdb (#4) relative to
    20791 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20792 Matrix rotation and translation 
    20793 -0.52942533 -0.83835713 -0.12986823 193.28916294 
    20794 -0.83200082 0.54301306 -0.11362708 181.33802457 
    20795 0.16578017 0.04789351 -0.98499883 189.61837429 
    20796 Axis 0.47935653 -0.87741750 0.01886410 
    20797 Axis point 136.95425476 -0.00000000 107.56116607 
    20798 Rotation angle (degrees) 170.30074936 
    20799 Shift along axis -62.87775456 
    20800  
    20801 
    20802 > fitmap #4 inMap #2
    20803 
    20804 Fit molecule RNAFramework.pdb (#4) to map
    20805 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20806 average map value = 0.6225, steps = 28 
    20807 shifted from previous position = 0.0947 
    20808 rotated from previous position = 0.0863 degrees 
    20809 atoms outside contour = 6392, contour level = 0.31215 
    20810  
    20811 Position of RNAFramework.pdb (#4) relative to
    20812 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20813 Matrix rotation and translation 
    20814 -0.52840892 -0.83900084 -0.12985079 193.23139885 
    20815 -0.83278411 0.54196525 -0.11288909 181.38379555 
    20816 0.16508861 0.04848616 -0.98508598 189.66284489 
    20817 Axis 0.47991408 -0.87712067 0.01848794 
    20818 Axis point 137.02747640 0.00000000 107.52509258 
    20819 Rotation angle (degrees) 170.32092736 
    20820 Shift along axis -62.85453356 
    20821  
    20822 
    20823 > fitmap #4 inMap #2
    20824 
    20825 Fit molecule RNAFramework.pdb (#4) to map
    20826 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20827 average map value = 0.6226, steps = 40 
    20828 shifted from previous position = 0.172 
    20829 rotated from previous position = 0.158 degrees 
    20830 atoms outside contour = 6394, contour level = 0.31215 
    20831  
    20832 Position of RNAFramework.pdb (#4) relative to
    20833 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20834 Matrix rotation and translation 
    20835 -0.53031734 -0.83791946 -0.12905083 193.24133936 
    20836 -0.83144074 0.54378200 -0.11404865 181.28718225 
    20837 0.16573906 0.04681624 -0.98505754 189.53162525 
    20838 Axis 0.47892456 -0.87764413 0.01928837 
    20839 Axis point 136.89388468 0.00000000 107.52008015 
    20840 Rotation angle (degrees) 170.33170630 
    20841 Shift along axis -62.90185149 
    20842  
    20843 
    20844 > fitmap #4 inMap #2
    20845 
    20846 Fit molecule RNAFramework.pdb (#4) to map
    20847 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20848 average map value = 0.6226, steps = 40 
    20849 shifted from previous position = 0.00903 
    20850 rotated from previous position = 0.0104 degrees 
    20851 atoms outside contour = 6393, contour level = 0.31215 
    20852  
    20853 Position of RNAFramework.pdb (#4) relative to
    20854 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20855 Matrix rotation and translation 
    20856 -0.53044188 -0.83784621 -0.12901455 193.24584193 
    20857 -0.83134950 0.54390357 -0.11413397 181.28252563 
    20858 0.16579815 0.04671484 -0.98505241 189.52679273 
    20859 Axis 0.47885865 -0.87767894 0.01934118 
    20860 Axis point 136.88617931 -0.00000000 107.52305641 
    20861 Rotation angle (degrees) 170.33133830 
    20862 Shift along axis -62.90474039 
    20863  
    20864 
    20865 > fitmap #4 inMap #2
    20866 
    20867 Fit molecule RNAFramework.pdb (#4) to map
    20868 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20869 average map value = 0.6226, steps = 40 
    20870 shifted from previous position = 0.00663 
    20871 rotated from previous position = 0.00906 degrees 
    20872 atoms outside contour = 6394, contour level = 0.31215 
    20873  
    20874 Position of RNAFramework.pdb (#4) relative to
    20875 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20876 Matrix rotation and translation 
    20877 -0.53054871 -0.83778287 -0.12898662 193.24671481 
    20878 -0.83127026 0.54400855 -0.11421083 181.27865681 
    20879 0.16585366 0.04662842 -0.98504716 189.52230498 
    20880 Axis 0.47880178 -0.87770894 0.01938738 
    20881 Axis point 136.87783103 -0.00000000 107.52571314 
    20882 Rotation angle (degrees) 170.33075876 
    20883 Shift along axis -62.90868588 
    20884  
    20885 
    20886 > fitmap #4 inMap #2
    20887 
    20888 Fit molecule RNAFramework.pdb (#4) to map
    20889 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20890 average map value = 0.6226, steps = 40 
    20891 shifted from previous position = 0.00255 
    20892 rotated from previous position = 0.00596 degrees 
    20893 atoms outside contour = 6394, contour level = 0.31215 
    20894  
    20895 Position of RNAFramework.pdb (#4) relative to
    20896 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20897 Matrix rotation and translation 
    20898 -0.53061436 -0.83774063 -0.12899092 193.24739434 
    20899 -0.83121746 0.54407713 -0.11426838 181.27705774 
    20900 0.16590824 0.04658715 -0.98503992 189.52120946 
    20901 Axis 0.47876520 -0.87772828 0.01941535 
    20902 Axis point 136.87137788 -0.00000000 107.52969861 
    20903 Rotation angle (degrees) 170.32902441 
    20904 Shift along axis -62.91225338 
    20905  
    20906 
    20907 > fitmap #4 inMap #2
    20908 
    20909 Fit molecule RNAFramework.pdb (#4) to map
    20910 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20911 average map value = 0.6226, steps = 40 
    20912 shifted from previous position = 0.0154 
    20913 rotated from previous position = 0.0134 degrees 
    20914 atoms outside contour = 6391, contour level = 0.31215 
    20915  
    20916 Position of RNAFramework.pdb (#4) relative to
    20917 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20918 Matrix rotation and translation 
    20919 -0.53045111 -0.83782579 -0.12910920 193.24241393 
    20920 -0.83132018 0.54393221 -0.11421111 181.28407307 
    20921 0.16591563 0.04674776 -0.98503107 189.53300530 
    20922 Axis 0.47884554 -0.87768581 0.01935391 
    20923 Axis point 136.87624110 -0.00000000 107.53505785 
    20924 Rotation angle (degrees) 170.32439089 
    20925 Shift along axis -62.90898552 
    20926  
    20927 
    20928 > fitmap #4 inMap #2
    20929 
    20930 Fit molecule RNAFramework.pdb (#4) to map
    20931 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20932 average map value = 0.6226, steps = 28 
    20933 shifted from previous position = 0.0718 
    20934 rotated from previous position = 0.0432 degrees 
    20935 atoms outside contour = 6393, contour level = 0.31215 
    20936  
    20937 Position of RNAFramework.pdb (#4) relative to
    20938 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20939 Matrix rotation and translation 
    20940 -0.53095900 -0.83753101 -0.12893396 193.29818267 
    20941 -0.83094869 0.54442384 -0.11457148 181.25869633 
    20942 0.16615185 0.04630484 -0.98501217 189.50458316 
    20943 Axis 0.47857787 -0.87782675 0.01958123 
    20944 Axis point 136.86336984 0.00000000 107.54403816 
    20945 Rotation angle (degrees) 170.32394045 
    20946 Shift along axis -62.89476797 
    20947  
    20948 
    20949 > fitmap #4 inMap #2
    20950 
    20951 Fit molecule RNAFramework.pdb (#4) to map
    20952 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20953 average map value = 0.6226, steps = 40 
    20954 shifted from previous position = 0.099 
    20955 rotated from previous position = 0.0775 degrees 
    20956 atoms outside contour = 6394, contour level = 0.31215 
    20957  
    20958 Position of RNAFramework.pdb (#4) relative to
    20959 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20960 Matrix rotation and translation 
    20961 -0.53009082 -0.83797768 -0.12960230 193.29560725 
    20962 -0.83152881 0.54364900 -0.11404061 181.31196808 
    20963 0.16602161 0.04731626 -0.98498607 189.58365265 
    20964 Axis 0.47901023 -0.87760053 0.01914436 
    20965 Axis point 136.90971400 0.00000000 107.56638492 
    20966 Rotation angle (degrees) 170.30360307 
    20967 Shift along axis -62.89944955 
    20968  
    20969 
    20970 > fitmap #4 inMap #2
    20971 
    20972 Fit molecule RNAFramework.pdb (#4) to map
    20973 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20974 average map value = 0.6226, steps = 40 
    20975 shifted from previous position = 0.0419 
    20976 rotated from previous position = 0.0343 degrees 
    20977 atoms outside contour = 6393, contour level = 0.31215 
    20978  
    20979 Position of RNAFramework.pdb (#4) relative to
    20980 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    20981 Matrix rotation and translation 
    20982 -0.52974331 -0.83820808 -0.12953326 193.25968399 
    20983 -0.83182280 0.54327514 -0.11367765 181.32432651 
    20984 0.16565769 0.04752884 -0.98503710 189.59123822 
    20985 Axis 0.47920853 -0.87749581 0.01898112 
    20986 Axis point 136.93313178 -0.00000000 107.53913739 
    20987 Rotation angle (degrees) 170.31677429 
    20988 Shift along axis -62.90099425 
    20989  
    20990 
    20991 > fitmap #4 inMap #2
    20992 
    20993 Fit molecule RNAFramework.pdb (#4) to map
    20994 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    20995 average map value = 0.6226, steps = 28 
    20996 shifted from previous position = 0.0615 
    20997 rotated from previous position = 0.0357 degrees 
    20998 atoms outside contour = 6393, contour level = 0.31215 
    20999  
    21000 Position of RNAFramework.pdb (#4) relative to
    21001 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    21002 Matrix rotation and translation 
    21003 -0.53017505 -0.83796402 -0.12934576 193.30043256 
    21004 -0.83151945 0.54368480 -0.11393813 181.29954192 
    21005 0.16579934 0.04714646 -0.98503164 189.55796749 
    21006 Axis 0.47898499 -0.87761390 0.01916293 
    21007 Axis point 136.92199640 0.00000000 107.53717401 
    21008 Rotation angle (degrees) 170.31960764 
    21009 Shift along axis -62.89050742 
    21010  
    21011 
    21012 > fitmap #4 inMap #2
    21013 
    21014 Fit molecule RNAFramework.pdb (#4) to map
    21015 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    21016 average map value = 0.6226, steps = 28 
    21017 shifted from previous position = 0.0703 
    21018 rotated from previous position = 0.0434 degrees 
    21019 atoms outside contour = 6394, contour level = 0.31215 
    21020  
    21021 Position of RNAFramework.pdb (#4) relative to
    21022 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    21023 Matrix rotation and translation 
    21024 -0.52973103 -0.83815780 -0.12990828 193.31024775 
    21025 -0.83176169 0.54333369 -0.11384481 181.33352954 
    21026 0.16600342 0.04774570 -0.98496841 189.61852239 
    21027 Axis 0.47918674 -0.87750801 0.01896726 
    21028 Axis point 136.93416513 0.00000000 107.58002936 
    21029 Rotation angle (degrees) 170.29303871 
    21030 Shift along axis -62.89337370 
    21031  
    21032 
    21033 > fitmap #4 inMap #2
    21034 
    21035 Fit molecule RNAFramework.pdb (#4) to map
    21036 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    21037 average map value = 0.6226, steps = 40 
    21038 shifted from previous position = 0.0381 
    21039 rotated from previous position = 0.0225 degrees 
    21040 atoms outside contour = 6394, contour level = 0.31215 
    21041  
    21042 Position of RNAFramework.pdb (#4) relative to
    21043 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    21044 Matrix rotation and translation 
    21045 -0.52988676 -0.83811466 -0.12955101 193.29696583 
    21046 -0.83170482 0.54342707 -0.11381466 181.31707977 
    21047 0.16579122 0.04743942 -0.98501895 189.58610908 
    21048 Axis 0.47912775 -0.87753853 0.01904529 
    21049 Axis point 136.93521963 0.00000000 107.54883253 
    21050 Rotation angle (degrees) 170.31223978 
    21051 Shift along axis -62.88805910 
    21052  
    21053 
    21054 > fitmap #4 inMap #2
    21055 
    21056 Fit molecule RNAFramework.pdb (#4) to map
    21057 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    21058 average map value = 0.6226, steps = 40 
    21059 shifted from previous position = 0.0251 
    21060 rotated from previous position = 0.0206 degrees 
    21061 atoms outside contour = 6395, contour level = 0.31215 
    21062  
    21063 Position of RNAFramework.pdb (#4) relative to
    21064 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    21065 Matrix rotation and translation 
    21066 -0.52963879 -0.83823915 -0.12975942 193.29019466 
    21067 -0.83185345 0.54321275 -0.11375147 181.32886535 
    21068 0.16583787 0.04769372 -0.98499881 189.60610643 
    21069 Axis 0.47924717 -0.87747526 0.01895582 
    21070 Axis point 136.94085879 0.00000000 107.56081005 
    21071 Rotation angle (degrees) 170.30308708 
    21072 Shift along axis -62.88367546 
    21073  
    21074 
    21075 > fitmap #4 inMap #2
    21076 
    21077 Fit molecule RNAFramework.pdb (#4) to map
    21078 cryosparc_P12_J2773_004_volume_map.mrc (#2) using 10778 atoms 
    21079 average map value = 0.6225, steps = 28 
    21080 shifted from previous position = 0.106 
    21081 rotated from previous position = 0.101 degrees 
    21082 atoms outside contour = 6392, contour level = 0.31215 
    21083  
    21084 Position of RNAFramework.pdb (#4) relative to
    21085 cryosparc_P12_J2773_004_volume_map.mrc (#2) coordinates: 
    21086 Matrix rotation and translation 
    21087 -0.52843581 -0.83898094 -0.12986988 193.23217232 
    21088 -0.83276475 0.54199510 -0.11288860 181.38201811 
    21089 0.16510018 0.04849678 -0.98508352 189.66121991 
    21090 Axis 0.47989887 -0.87712906 0.01848460 
    21091 Axis point 137.02462183 0.00000000 107.52489227 
    21092 Rotation angle (degrees) 170.32000494 
    21093 Shift along axis -62.85772700 
    21094  
    21095 
    21096 > isolde start
    21097 
    21098 > set selectionWidth 4
    21099 
    21100 Done loading forcefield 
    21101 
    21102 > isolde set simFidelityMode Medium/Medium
    21103 
    21104 ISOLDE: setting sim fidelity mode to Medium/Medium 
    21105 nonbonded_cutoff_distance = 0.900000 
    21106 use_gbsa = True 
    21107 gbsa_cutoff = 1.100000 
    21108 ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
    21109 chains... 
    21110 Opened RNAFramework.pdb map 15 as #1, grid size 49,43,35, pixel 5, shown at
    21111 level 0.038, step 1, values float32 
    21112 Chain information for RNAFramework.pdb 
    21113 --- 
    21114 Chain | Description 
    21115 4.2/A | No description available 
    21116  
    21117 
    21118 > isolde sim start /A
    21119 
    21120 ISOLDE: started sim 
    21121 
    21122 > isolde sim pause
    21123 
    21124 > isolde sim resume
    21125 
    21126 > isolde sim stop discardTo start
    21127 
    21128 Sim termination reason: None 
    21129 reverting to start 
    21130 ISOLDE: Checking and correcting nomenclature for (pseudo)symmetric side
    21131 chains... 
    21132 ISOLDE: stopped sim 
    21133 
    21134 > isolde sim start /A
    21135 
    21136 > isolde stepto next
    21137 
    21138 > isolde stepto /A:1
    21139 
    21140 > isolde stepto prev
    21141 
    21142 [Repeated 57 time(s)]
    21143 
    21144 > isolde sim start /A:279
    21145 
    21146 ISOLDE: started sim 
    21147 
    21148 > close #4
    21149 
    21150 Sim termination reason: model deleted 
    21151 ISOLDE: model deleted during running simulation. 
    21152 
    21153 > hide #!2 models
    21154 
    21155 > show #!2 models
    21156 
    21157 > fitmap #4 inMap #2 search 500 resolution 15
    21158 
    21159 No atoms or maps for #4 
    21160 
    21161 > close
    21162 
    21163 > open
    21164 > /Users/francescappadoo/Downloads/cryosparc_P12_J2803_class_02_00122_volume.mrc
    21165 
    21166 Opened cryosparc_P12_J2803_class_02_00122_volume.mrc as #1, grid size
    21167 128,128,128, pixel 2.96, shown at level 0.0617, step 1, values float32 
    21168 
    21169 > open
    21170 > /Users/francescappadoo/Downloads/cryosparc_P12_J2803_class_04_00122_volume.mrc
    21171 
    21172 Opened cryosparc_P12_J2803_class_04_00122_volume.mrc as #2, grid size
    21173 128,128,128, pixel 2.96, shown at level 0.0457, step 1, values float32 
    21174 
    21175 > open
    21176 > /Users/francescappadoo/Downloads/cryosparc_P12_J2803_class_03_00122_volume.mrc
    21177 
    21178 Opened cryosparc_P12_J2803_class_03_00122_volume.mrc as #3, grid size
    21179 128,128,128, pixel 2.96, shown at level 0.0375, step 1, values float32 
    21180 
    21181 > tile
    21182 
    21183 3 models tiled 
    21184 
    21185 > surface dust #1 size 29.6
    21186 
    21187 > surface dust #2 size 29.6
    21188 
    21189 > surface dust #3 size 29.6
    21190 
    21191 > volume #1 level 0.474
    21192 
    21193 > volume #2 level 0.2388
    21194 
    21195 > volume #3 level 0.1425
    21196 
    21197 > tile
    21198 
    21199 3 models tiled 
    21200 
    21201 > tile
    21202 
    21203 3 models tiled 
    21204 
    21205 > volume #3 level 0.1634
    21206 
    21207 > volume #3 level 0.1844
    21208 
    21209 > volume #2 level 0.246
    21210 
    21211 > volume #1 level 0.3936
    21212 
    21213 > volume #2 level 0.246
    21214 
    21215 > volume #3 level 0.1669
    21216 
    21217 > tile
    21218 
    21219 3 models tiled 
    21220 
    21221 > tile
    21222 
    21223 3 models tiled 
    21224 
    21225 > tile
    21226 
    21227 3 models tiled 
    21228 
    21229 > open
    21230 > /Users/francescappadoo/Downloads/cryosparc_P12_J2806_class_07_00122_volume.mrc
    21231 
    21232 Opened cryosparc_P12_J2806_class_07_00122_volume.mrc as #4, grid size
    21233 128,128,128, pixel 2.96, shown at level 0.0543, step 1, values float32 
    21234 
    21235 > hide #!1 models
    21236 
    21237 > hide #!2 models
    21238 
    21239 > hide #!3 models
    21240 
    21241 > tile
    21242 
    21243 1 model tiled 
    21244 
    21245 > surface dust #4 size 29.6
    21246 
    21247 > volume #4 level 0.285
    21248 
    21249 > tile
    21250 
    21251 1 model tiled 
    21252 
    21253 > tile
    21254 
    21255 1 model tiled 
    21256 
    21257 > volume #4 level 0.2698
    21258 
    21259 > tile
    21260 
    21261 1 model tiled 
    21262 
    21263 > open
    21264 > /Users/francescappadoo/Downloads/rnacomposer-2024-07-05-171619/RNAFramework.pdb
    21265 
    21266 Chain information for RNAFramework.pdb #5 
    21267 --- 
    21268 Chain | Description 
    21269 A | No description available 
    21270  
    21271 
    21272 > tile
    21273 
    21274 2 models tiled 
    21275 
    21276 > select add #5
    21277 
    21278 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    21279 
    21280 > ui mousemode right "rotate selected models"
    21281 
    21282 > view matrix models
    21283 > #5,0.86474,-0.39715,-0.3074,316.77,-0.31872,0.039053,-0.94705,168.76,0.38812,0.91692,-0.092806,168.38
    21284 
    21285 > transparency #4.1 50
    21286 
    21287 > fitmap #5 inMap #4 search 200 resolution 17
    21288 
    21289 Opened RNAFramework.pdb map 17 as #6, grid size 40,35,46, pixel 5.67, shown at
    21290 level 0.0337, step 1, values float32 
    21291 Found 49 unique fits from 200 random placements having fraction of points
    21292 inside contour >= 0.100 (200 of 200). 
    21293  
    21294 Correlations and times found: 
    21295 0.6081 (35), 0.5682 (16), 0.5597 (18), 0.5595 (9), 0.5593 (4), 0.5472 (12),
    21296 0.5412 (10), 0.5395 (5), 0.539 (2), 0.5389 (6), 0.5384 (16), 0.5366 (4),
    21297 0.5335 (2), 0.5299 (5), 0.5268 (2), 0.5231 (3), 0.5227 (1), 0.5197 (2), 0.5149
    21298 (1), 0.5142 (1), 0.5136 (7), 0.5125 (1), 0.5121 (1), 0.5025 (2), 0.5024 (2),
    21299 0.4986 (3), 0.4984 (1), 0.4971 (4), 0.4957 (1), 0.4914 (2), 0.4897 (2), 0.4884
    21300 (1), 0.4825 (3), 0.4657 (1), 0.4538 (1), 0.4538 (1), 0.4535 (1), 0.4466 (1),
    21301 0.4313 (1), 0.4309 (1), 0.4257 (1), 0.4189 (1), 0.4119 (1), 0.4102 (1), 0.3959
    21302 (1), 0.379 (1), 0.3769 (1), 0.3714 (1), 0.3638 (1) 
    21303  
    21304 Best fit found: 
    21305 Fit map RNAFramework.pdb map 17 in map
    21306 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21307 correlation = 0.6081, correlation about mean = 0.3929, overlap = 81.7 
    21308 steps = 296, shift = 26.2, angle = 88.1 degrees 
    21309 Position of RNAFramework.pdb map 17 (#6) relative to
    21310 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21311 Matrix rotation and translation 
    21312 0.55368455 0.82448955 -0.11683522 192.07393883 
    21313 0.61628074 -0.50007327 -0.60837881 199.46519740 
    21314 -0.56002810 0.26484663 -0.78499988 181.43939336 
    21315 Axis 0.87222578 0.44268552 -0.20797046 
    21316 Axis point 0.00000000 16.10805354 129.44736902 
    21317 Rotation angle (degrees) 149.96208011 
    21318 Shift along axis 218.09816304 
    21319  
    21320 Found 49 fits. 
    21321 
    21322 > ui tool show "Fit in Map"
    21323 
    21324 > fitmap #5 inMap #4 resolution 17 metric correlation
    21325 
    21326 Fit map RNAFramework.pdb map 17 in map
    21327 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21328 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21329 steps = 44, shift = 0.186, angle = 1.13 degrees 
    21330  
    21331 Position of RNAFramework.pdb map 17 (#6) relative to
    21332 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21333 Matrix rotation and translation 
    21334 0.54094746 0.83252214 -0.11951068 191.85561540 
    21335 0.61475831 -0.48835855 -0.61933686 199.40984889 
    21336 -0.57397567 0.26155849 -0.77597623 181.24368313 
    21337 Axis 0.86799889 0.44781154 -0.21457573 
    21338 Axis point 0.00000000 14.44952029 130.39178679 
    21339 Rotation angle (degrees) 149.50728210 
    21340 Shift along axis 216.93799866 
    21341  
    21342 Average map value = 0.2964 for 10778 atoms, 7036 outside contour 
    21343 
    21344 > select subtract #5
    21345 
    21346 Nothing selected 
    21347 
    21348 > fitmap #5 inMap #4
    21349 
    21350 Fit molecule RNAFramework.pdb (#5) to map
    21351 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21352 average map value = 0.2972, steps = 156 
    21353 shifted from previous position = 31 
    21354 rotated from previous position = 1.66 degrees 
    21355 atoms outside contour = 6999, contour level = 0.26984 
    21356  
    21357 Position of RNAFramework.pdb (#5) relative to
    21358 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21359 Matrix rotation and translation 
    21360 0.55528491 0.82029785 -0.13700432 192.19235747 
    21361 0.60830693 -0.51294174 -0.60568428 199.59357804 
    21362 -0.56711670 0.25298664 -0.78382168 180.30416990 
    21363 Axis 0.87308557 0.43733275 -0.21554964 
    21364 Axis point 0.00000000 17.50346716 129.68755581 
    21365 Rotation angle (degrees) 150.54466008 
    21366 Shift along axis 216.22468332 
    21367  
    21368 
    21369 > fitmap #5 inMap #4 resolution 17 metric correlation
    21370 
    21371 Fit map RNAFramework.pdb map 17 in map
    21372 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21373 correlation = 0.6083, correlation about mean = 0.3945, overlap = 81.76 
    21374 steps = 64, shift = 1.03, angle = 1.69 degrees 
    21375  
    21376 Position of RNAFramework.pdb map 17 (#6) relative to
    21377 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21378 Matrix rotation and translation 
    21379 0.54099542 0.83260494 -0.11871406 191.80567645 
    21380 0.61501151 -0.48792970 -0.61942349 199.41978603 
    21381 -0.57365913 0.26209473 -0.77602936 181.23179173 
    21382 Axis 0.86799757 0.44796716 -0.21425601 
    21383 Axis point 0.00000000 14.43163523 130.35017899 
    21384 Rotation angle (degrees) 149.48337092 
    21385 Shift along axis 216.99037725 
    21386  
    21387 Average map value = 0.2965 for 10778 atoms, 7033 outside contour 
    21388 
    21389 > fitmap #5 inMap #4 resolution 17 metric correlation
    21390 
    21391 Fit map RNAFramework.pdb map 17 in map
    21392 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21393 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21394 steps = 44, shift = 0.062, angle = 0.0718 degrees 
    21395  
    21396 Position of RNAFramework.pdb map 17 (#6) relative to
    21397 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21398 Matrix rotation and translation 
    21399 0.54103290 0.83240423 -0.11994439 191.86322812 
    21400 0.61460597 -0.48869774 -0.61922049 199.41057952 
    21401 -0.57405827 0.26130010 -0.77600218 181.24571427 
    21402 Axis 0.86803600 0.44767516 -0.21471017 
    21403 Axis point 0.00000000 14.48245043 130.40560250 
    21404 Rotation angle (degrees) 149.52307662 
    21405 Shift along axis 216.90005285 
    21406  
    21407 Average map value = 0.2964 for 10778 atoms, 7036 outside contour 
    21408 
    21409 > fitmap #5 inMap #4 resolution 17 metric correlation
    21410 
    21411 Fit map RNAFramework.pdb map 17 in map
    21412 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21413 correlation = 0.6083, correlation about mean = 0.3945, overlap = 81.76 
    21414 steps = 40, shift = 0.0513, angle = 0.0569 degrees 
    21415  
    21416 Position of RNAFramework.pdb map 17 (#6) relative to
    21417 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21418 Matrix rotation and translation 
    21419 0.54104633 0.83253643 -0.11896230 191.81602175 
    21420 0.61492984 -0.48812831 -0.61934808 199.41935131 
    21421 -0.57369866 0.26194252 -0.77605153 181.23423692 
    21422 Axis 0.86801981 0.44788878 -0.21432979 
    21423 Axis point 0.00000000 14.44903698 130.35828413 
    21424 Rotation angle (degrees) 149.49295572 
    21425 Shift along axis 216.97390055 
    21426  
    21427 Average map value = 0.2964 for 10778 atoms, 7033 outside contour 
    21428 
    21429 > fitmap #5 inMap #4 resolution 17 metric correlation
    21430 
    21431 Fit map RNAFramework.pdb map 17 in map
    21432 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21433 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21434 steps = 44, shift = 0.0547, angle = 0.0597 degrees 
    21435  
    21436 Position of RNAFramework.pdb map 17 (#6) relative to
    21437 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21438 Matrix rotation and translation 
    21439 0.54110533 0.83235243 -0.11997718 191.86759612 
    21440 0.61459637 -0.48879060 -0.61915674 199.41247673 
    21441 -0.57400029 0.26129145 -0.77604798 181.24563664 
    21442 Axis 0.86806093 0.44763534 -0.21469239 
    21443 Axis point 0.00000000 14.49418119 130.40225076 
    21444 Rotation angle (degrees) 149.52681783 
    21445 Shift along axis 216.90477586 
    21446  
    21447 Average map value = 0.2964 for 10778 atoms, 7035 outside contour 
    21448 
    21449 > fitmap #5 inMap #4 resolution 17 metric correlation
    21450 
    21451 Fit map RNAFramework.pdb map 17 in map
    21452 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21453 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21454 steps = 40, shift = 0.0166, angle = 0.0439 degrees 
    21455  
    21456 Position of RNAFramework.pdb map 17 (#6) relative to
    21457 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21458 Matrix rotation and translation 
    21459 0.54086688 0.83259975 -0.11933460 191.85074707 
    21460 0.61482051 -0.48817486 -0.61941993 199.40839817 
    21461 -0.57398499 0.26165434 -0.77593702 181.24335110 
    21462 Axis 0.86796853 0.44788759 -0.21453983 
    21463 Axis point 0.00000000 14.42968443 130.38928457 
    21464 Rotation angle (degrees) 149.49924841 
    21465 Shift along axis 216.94903904 
    21466  
    21467 Average map value = 0.2964 for 10778 atoms, 7035 outside contour 
    21468 
    21469 > select #5:63-68
    21470 
    21471 189 atoms, 203 bonds, 6 residues, 1 model selected 
    21472 
    21473 > color sel lime
    21474 
    21475 > select add #5
    21476 
    21477 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    21478 
    21479 > select subtract #5
    21480 
    21481 Nothing selected 
    21482 
    21483 > select ~sel & ##selected
    21484 
    21485 Nothing selected 
    21486 
    21487 > fitmap #5 inMap #4 resolution 17 metric correlation
    21488 
    21489 Fit map RNAFramework.pdb map 17 in map
    21490 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21491 correlation = 0.5684, correlation about mean = 0.3004, overlap = 75.83 
    21492 steps = 60, shift = 0.377, angle = 0.262 degrees 
    21493  
    21494 Position of RNAFramework.pdb map 17 (#6) relative to
    21495 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21496 Matrix rotation and translation 
    21497 -0.56237354 -0.82479315 -0.05875638 193.12681077 
    21498 -0.82186279 0.56536447 -0.07003265 180.31040203 
    21499 0.09098118 0.00890520 -0.99581280 187.18058168 
    21500 Axis 0.46627144 -0.88447235 0.01730911 
    21501 Axis point 139.57692851 0.00000000 100.72345694 
    21502 Rotation angle (degrees) 175.14421867 
    21503 Shift along axis -66.19012084 
    21504  
    21505 Average map value = 0.2775 for 10778 atoms, 7222 outside contour 
    21506 
    21507 > fitmap #5 inMap #4 resolution 17 metric correlation
    21508 
    21509 Fit map RNAFramework.pdb map 17 in map
    21510 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21511 correlation = 0.5683, correlation about mean = 0.3003, overlap = 75.82 
    21512 steps = 44, shift = 0.0566, angle = 0.0191 degrees 
    21513  
    21514 Position of RNAFramework.pdb map 17 (#6) relative to
    21515 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21516 Matrix rotation and translation 
    21517 -0.56239504 -0.82475937 -0.05902411 193.17632161 
    21518 -0.82181376 0.56541203 -0.07022379 180.28493965 
    21519 0.09129063 0.00901334 -0.99578351 187.18788493 
    21520 Axis 0.46624825 -0.88448411 0.01733262 
    21521 Axis point 139.57444055 0.00000000 100.75052425 
    21522 Rotation angle (degrees) 175.12552123 
    21523 Shift along axis -66.14658609 
    21524  
    21525 Average map value = 0.2776 for 10778 atoms, 7218 outside contour 
    21526 
    21527 > fitmap #5 inMap #4 resolution 17 metric correlation
    21528 
    21529 Fit map RNAFramework.pdb map 17 in map
    21530 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21531 correlation = 0.5605, correlation about mean = 0.3428, overlap = 74.41 
    21532 steps = 68, shift = 1.15, angle = 2.28 degrees 
    21533  
    21534 Position of RNAFramework.pdb map 17 (#6) relative to
    21535 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21536 Matrix rotation and translation 
    21537 -0.51089319 -0.81995624 0.25818590 186.87620090 
    21538 -0.58161945 0.55086344 0.59855516 175.40729663 
    21539 -0.63301423 0.15563184 -0.75833484 178.00361529 
    21540 Axis -0.43282160 0.87087459 0.23290106 
    21541 Axis point 160.98205834 0.00000000 28.26810334 
    21542 Rotation angle (degrees) 149.22489434 
    21543 Shift along axis 113.33093182 
    21544  
    21545 Average map value = 0.2659 for 10778 atoms, 7240 outside contour 
    21546 
    21547 > fitmap #5 inMap #4 resolution 17 metric correlation
    21548 
    21549 Fit map RNAFramework.pdb map 17 in map
    21550 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21551 correlation = 0.5404, correlation about mean = 0.246, overlap = 72.18 
    21552 steps = 44, shift = 0.788, angle = 0.871 degrees 
    21553  
    21554 Position of RNAFramework.pdb map 17 (#6) relative to
    21555 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21556 Matrix rotation and translation 
    21557 -0.16367215 -0.95167012 -0.25987591 189.47019210 
    21558 0.94595777 -0.07664353 -0.31510265 194.20893971 
    21559 0.27995600 -0.29740516 0.91278411 213.46189027 
    21560 Axis 0.00896984 -0.27360988 0.96179893 
    21561 Axis point -10.39545472 210.35326594 0.00000000 
    21562 Rotation angle (degrees) 99.42554375 
    21563 Shift along axis 153.86944923 
    21564  
    21565 Average map value = 0.264 for 10778 atoms, 7402 outside contour 
    21566 
    21567 > fitmap #5 inMap #4 resolution 17 metric correlation
    21568 
    21569 Fit map RNAFramework.pdb map 17 in map
    21570 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21571 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21572 steps = 44, shift = 0.186, angle = 1.13 degrees 
    21573  
    21574 Position of RNAFramework.pdb map 17 (#6) relative to
    21575 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21576 Matrix rotation and translation 
    21577 0.54094655 0.83252282 -0.11951010 191.85551426 
    21578 0.61475845 -0.48835727 -0.61933775 199.40985365 
    21579 -0.57397638 0.26155875 -0.77597562 181.24365382 
    21580 Axis 0.86799858 0.44781207 -0.21457590 
    21581 Axis point 0.00000000 14.44939206 130.39181190 
    21582 Rotation angle (degrees) 149.50722625 
    21583 Shift along axis 216.93793175 
    21584  
    21585 Average map value = 0.2964 for 10778 atoms, 7036 outside contour 
    21586 
    21587 > volume #4 level 0.2812
    21588 
    21589 > fitmap #5 inMap #4 resolution 17 metric correlation
    21590 
    21591 Fit map RNAFramework.pdb map 17 in map
    21592 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21593 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21594 steps = 40, shift = 0.00622, angle = 0.018 degrees 
    21595  
    21596 Position of RNAFramework.pdb map 17 (#6) relative to
    21597 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21598 Matrix rotation and translation 
    21599 0.54084336 0.83262701 -0.11925100 191.84920028 
    21600 0.61484964 -0.48810229 -0.61944822 199.40789842 
    21601 -0.57397595 0.26170300 -0.77592730 181.24333645 
    21602 Axis 0.86795901 0.44791701 -0.21451691 
    21603 Axis point 0.00000000 14.42212529 130.38727289 
    21604 Rotation angle (degrees) 149.49593068 
    21605 Shift along axis 216.95567169 
    21606  
    21607 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    21608 
    21609 > fitmap #5 inMap #4 resolution 17 metric correlation
    21610 
    21611 Fit map RNAFramework.pdb map 17 in map
    21612 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21613 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21614 steps = 40, shift = 0.00226, angle = 0.0026 degrees 
    21615  
    21616 Position of RNAFramework.pdb map 17 (#6) relative to
    21617 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21618 Matrix rotation and translation 
    21619 0.54084187 0.83263435 -0.11920654 191.84710454 
    21620 0.61486387 -0.48807421 -0.61945622 199.40825595 
    21621 -0.57396211 0.26173204 -0.77592774 181.24283745 
    21622 Axis 0.86795755 0.44792758 -0.21450074 
    21623 Axis point 0.00000000 14.42023912 130.38532888 
    21624 Rotation angle (degrees) 149.49445496 
    21625 Shift along axis 216.95887926 
    21626  
    21627 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    21628 
    21629 > fitmap #5 inMap #4
    21630 
    21631 Fit molecule RNAFramework.pdb (#5) to map
    21632 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21633 average map value = 0.2972, steps = 44 
    21634 shifted from previous position = 1.03 
    21635 rotated from previous position = 1.66 degrees 
    21636 atoms outside contour = 7100, contour level = 0.28119 
    21637  
    21638 Position of RNAFramework.pdb (#5) relative to
    21639 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21640 Matrix rotation and translation 
    21641 0.55503935 0.82050465 -0.13676087 192.18118400 
    21642 0.60857020 -0.51262887 -0.60568471 199.58442244 
    21643 -0.56707463 0.25295024 -0.78386387 180.31005488 
    21644 Axis 0.87300948 0.43751771 -0.21548247 
    21645 Axis point 0.00000000 17.47305454 129.67731639 
    21646 Rotation angle (degrees) 150.54319567 
    21647 Shift along axis 216.24406041 
    21648  
    21649 
    21650 > fitmap #5 inMap #4
    21651 
    21652 Fit molecule RNAFramework.pdb (#5) to map
    21653 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21654 average map value = 0.2972, steps = 40 
    21655 shifted from previous position = 0.0663 
    21656 rotated from previous position = 0.0448 degrees 
    21657 atoms outside contour = 7101, contour level = 0.28119 
    21658  
    21659 Position of RNAFramework.pdb (#5) relative to
    21660 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21661 Matrix rotation and translation 
    21662 0.55538639 0.82016811 -0.13736926 192.24836510 
    21663 0.60810461 -0.51322456 -0.60564788 199.58829818 
    21664 -0.56723430 0.25283368 -0.78378594 180.32237241 
    21665 Axis 0.87312194 0.43719587 -0.21567999 
    21666 Axis point 0.00000000 17.50863922 129.71524978 
    21667 Rotation angle (degrees) 150.55314316 
    21668 Shift along axis 216.22351685 
    21669  
    21670 
    21671 > fitmap #5 inMap #4
    21672 
    21673 Fit molecule RNAFramework.pdb (#5) to map
    21674 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21675 average map value = 0.2972, steps = 44 
    21676 shifted from previous position = 0.0641 
    21677 rotated from previous position = 0.0313 degrees 
    21678 atoms outside contour = 7101, contour level = 0.28119 
    21679  
    21680 Position of RNAFramework.pdb (#5) relative to
    21681 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21682 Matrix rotation and translation 
    21683 0.55526757 0.82033321 -0.13686288 192.18896474 
    21684 0.60836762 -0.51284669 -0.60570384 199.59812971 
    21685 -0.56706859 0.25306473 -0.78383129 180.29878815 
    21686 Axis 0.87307779 0.43737401 -0.21549746 
    21687 Axis point 0.00000000 17.49848683 129.67954871 
    21688 Rotation angle (degrees) 150.54069216 
    21689 Shift along axis 216.24101816 
    21690  
    21691 
    21692 > select #5:77-79
    21693 
    21694 97 atoms, 104 bonds, 3 residues, 1 model selected 
    21695 
    21696 > color sel orange
    21697 
    21698 > select add #5
    21699 
    21700 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    21701 
    21702 > select subtract #5
    21703 
    21704 Nothing selected 
    21705 
    21706 > fitmap #5 inMap #4 resolution 17 metric correlation
    21707 
    21708 Fit map RNAFramework.pdb map 17 in map
    21709 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21710 correlation = 0.6083, correlation about mean = 0.3946, overlap = 81.76 
    21711 steps = 132, shift = 51.9, angle = 1.65 degrees 
    21712  
    21713 Position of RNAFramework.pdb map 17 (#6) relative to
    21714 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21715 Matrix rotation and translation 
    21716 0.54123147 0.83238115 -0.11920660 191.80892238 
    21717 0.61484362 -0.48845700 -0.61917454 199.42723301 
    21718 -0.57361646 0.26182331 -0.77615253 181.23096506 
    21719 Axis 0.86808642 0.44775027 -0.21434942 
    21720 Axis point 0.00000000 14.49415804 130.35465560 
    21721 Rotation angle (degrees) 149.50675878 
    21722 Shift along axis 216.95356521 
    21723  
    21724 Average map value = 0.2965 for 10778 atoms, 7118 outside contour 
    21725 
    21726 > fitmap #5 inMap #4 resolution 17 metric correlation
    21727 
    21728 Fit map RNAFramework.pdb map 17 in map
    21729 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21730 correlation = 0.6083, correlation about mean = 0.3945, overlap = 81.76 
    21731 steps = 68, shift = 4.42, angle = 0.0336 degrees 
    21732  
    21733 Position of RNAFramework.pdb map 17 (#6) relative to
    21734 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21735 Matrix rotation and translation 
    21736 0.54099701 0.83259592 -0.11877021 191.80722363 
    21737 0.61499280 -0.48796452 -0.61941464 199.41980505 
    21738 -0.57367770 0.26205862 -0.77602784 181.23217652 
    21739 Axis 0.86799928 0.44795388 -0.21427688 
    21740 Axis point 0.00000000 14.43447143 130.35260008 
    21741 Rotation angle (degrees) 149.48515973 
    21742 Shift along axis 216.98553966 
    21743  
    21744 Average map value = 0.2965 for 10778 atoms, 7118 outside contour 
    21745 
    21746 > fitmap #5 inMap #4 resolution 17 metric correlation
    21747 
    21748 Fit map RNAFramework.pdb map 17 in map
    21749 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21750 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21751 steps = 44, shift = 0.0629, angle = 0.0723 degrees 
    21752  
    21753 Position of RNAFramework.pdb map 17 (#6) relative to
    21754 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21755 Matrix rotation and translation 
    21756 0.54109156 0.83235912 -0.11999295 191.86656155 
    21757 0.61458929 -0.48878525 -0.61916800 199.41230046 
    21758 -0.57402086 0.26128017 -0.77603657 181.24581546 
    21759 Axis 0.86805656 0.44763782 -0.21470489 
    21760 Axis point 0.00000000 14.49311690 130.40402967 
    21761 Rotation angle (degrees) 149.52664865 
    21762 Shift along axis 216.90115157 
    21763  
    21764 Average map value = 0.2964 for 10778 atoms, 7110 outside contour 
    21765 
    21766 > fitmap #5 inMap #4 resolution 17 metric correlation
    21767 
    21768 Fit map RNAFramework.pdb map 17 in map
    21769 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21770 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21771 steps = 40, shift = 0.0145, angle = 0.0422 degrees 
    21772  
    21773 Position of RNAFramework.pdb map 17 (#6) relative to
    21774 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21775 Matrix rotation and translation 
    21776 0.54088577 0.83258462 -0.11935461 191.85212865 
    21777 0.61481326 -0.48820544 -0.61940303 199.40855562 
    21778 -0.57397495 0.26164546 -0.77594744 181.24362596 
    21779 Axis 0.86797522 0.44787454 -0.21454000 
    21780 Axis point 0.00000000 14.43299675 130.38909416 
    21781 Rotation angle (degrees) 149.50049618 
    21782 Shift along axis 216.94890232 
    21783  
    21784 Average map value = 0.2964 for 10778 atoms, 7109 outside contour 
    21785 
    21786 > fitmap #5 inMap #4 resolution 17 metric correlation
    21787 
    21788 Fit map RNAFramework.pdb map 17 in map
    21789 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21790 correlation = 0.6083, correlation about mean = 0.3945, overlap = 81.76 
    21791 steps = 72, shift = 7.31, angle = 0.0387 degrees 
    21792  
    21793 Position of RNAFramework.pdb map 17 (#6) relative to
    21794 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21795 Matrix rotation and translation 
    21796 0.54099564 0.83260836 -0.11868923 191.80328525 
    21797 0.61502371 -0.48791701 -0.61942138 199.42073078 
    21798 -0.57364585 0.26210755 -0.77603485 181.23255279 
    21799 Axis 0.86799736 0.44797299 -0.21424469 
    21800 Axis point 0.00000000 14.43176583 130.34910977 
    21801 Rotation angle (degrees) 149.48295229 
    21802 Shift along axis 216.99173272 
    21803  
    21804 Average map value = 0.2965 for 10778 atoms, 7118 outside contour 
    21805 
    21806 > select #5:85-99
    21807 
    21808 481 atoms, 518 bonds, 15 residues, 1 model selected 
    21809 
    21810 > color sel white
    21811 
    21812 > select add #5
    21813 
    21814 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    21815 
    21816 > select subtract #5
    21817 
    21818 Nothing selected 
    21819 
    21820 > fitmap #5 inMap #4 resolution 17 metric correlation
    21821 
    21822 Fit map RNAFramework.pdb map 17 in map
    21823 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21824 correlation = 0.6083, correlation about mean = 0.3946, overlap = 81.76 
    21825 steps = 48, shift = 0.474, angle = 0.00897 degrees 
    21826  
    21827 Position of RNAFramework.pdb map 17 (#6) relative to
    21828 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21829 Matrix rotation and translation 
    21830 0.54100249 0.83262592 -0.11853465 191.79844967 
    21831 0.61506891 -0.48782957 -0.61944537 199.42138870 
    21832 -0.57359092 0.26221449 -0.77603933 181.23050588 
    21833 Axis 0.86799605 0.44800389 -0.21418535 
    21834 Axis point 0.00000000 14.42546914 130.34190997 
    21835 Rotation angle (degrees) 149.47788562 
    21836 Shift along axis 217.00493590 
    21837  
    21838 Average map value = 0.2965 for 10778 atoms, 7119 outside contour 
    21839 
    21840 > fitmap #5 inMap #4 resolution 17 metric correlation
    21841 
    21842 Fit map RNAFramework.pdb map 17 in map
    21843 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21844 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21845 steps = 40, shift = 0.0618, angle = 0.0624 degrees 
    21846  
    21847 Position of RNAFramework.pdb map 17 (#6) relative to
    21848 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21849 Matrix rotation and translation 
    21850 0.54102345 0.83245922 -0.11960500 191.85621399 
    21851 0.61472367 -0.48848936 -0.61926809 199.41173720 
    21852 -0.57394114 0.26151452 -0.77601659 181.24325630 
    21853 Axis 0.86802604 0.44775590 -0.21458203 
    21854 Axis point 0.00000000 14.46577627 130.39071599 
    21855 Rotation angle (degrees) 149.51265565 
    21856 Shift along axis 216.93242467 
    21857  
    21858 Average map value = 0.2964 for 10778 atoms, 7109 outside contour 
    21859 
    21860 > fitmap #5 inMap #4 resolution 17 metric correlation
    21861 
    21862 Fit map RNAFramework.pdb map 17 in map
    21863 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21864 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21865 steps = 40, shift = 0.00677, angle = 0.0258 degrees 
    21866  
    21867 Position of RNAFramework.pdb map 17 (#6) relative to
    21868 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21869 Matrix rotation and translation 
    21870 0.54084676 0.83262317 -0.11926246 191.84953860 
    21871 0.61484542 -0.48811231 -0.61944451 199.40793910 
    21872 -0.57397727 0.26169656 -0.77592850 181.24336236 
    21873 Axis 0.86796036 0.44791288 -0.21452008 
    21874 Axis point 0.00000000 14.42310692 130.38757829 
    21875 Rotation angle (degrees) 149.49637227 
    21876 Shift along axis 216.95483807 
    21877  
    21878 Average map value = 0.2964 for 10778 atoms, 7109 outside contour 
    21879 
    21880 > fitmap #5 inMap #4 resolution 17 metric correlation
    21881 
    21882 Fit map RNAFramework.pdb map 17 in map
    21883 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21884 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21885 steps = 40, shift = 0.00179, angle = 0.00249 degrees 
    21886  
    21887 Position of RNAFramework.pdb map 17 (#6) relative to
    21888 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21889 Matrix rotation and translation 
    21890 0.54084542 0.83263015 -0.11921979 191.84786962 
    21891 0.61485939 -0.48808558 -0.61945171 199.40817035 
    21892 -0.57396357 0.26172419 -0.77592931 181.24301498 
    21893 Axis 0.86795901 0.44792301 -0.21450438 
    21894 Axis point 0.00000000 14.42117086 130.38574746 
    21895 Rotation angle (degrees) 149.49498542 
    21896 Shift along axis 216.95817445 
    21897  
    21898 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    21899 
    21900 > fitmap #5 inMap #4
    21901 
    21902 Fit molecule RNAFramework.pdb (#5) to map
    21903 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21904 average map value = 0.2972, steps = 48 
    21905 shifted from previous position = 3.2 
    21906 rotated from previous position = 1.67 degrees 
    21907 atoms outside contour = 7101, contour level = 0.28119 
    21908  
    21909 Position of RNAFramework.pdb (#5) relative to
    21910 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21911 Matrix rotation and translation 
    21912 0.55525119 0.82034899 -0.13683470 192.19117166 
    21913 0.60839785 -0.51282267 -0.60569381 199.59747876 
    21914 -0.56705219 0.25306225 -0.78384395 180.30062620 
    21915 Axis 0.87307296 0.43738993 -0.21548472 
    21916 Axis point 0.00000000 17.49570561 129.67839431 
    21917 Rotation angle (degrees) 150.54098427 
    21918 Shift along axis 216.24681130 
    21919  
    21920 
    21921 > fitmap #5 inMap #4
    21922 
    21923 Fit molecule RNAFramework.pdb (#5) to map
    21924 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21925 average map value = 0.2972, steps = 36 
    21926 shifted from previous position = 0.0527 
    21927 rotated from previous position = 0.0259 degrees 
    21928 atoms outside contour = 7102, contour level = 0.28119 
    21929  
    21930 Position of RNAFramework.pdb (#5) relative to
    21931 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21932 Matrix rotation and translation 
    21933 0.55532188 0.82022949 -0.13726355 192.23886153 
    21934 0.60818358 -0.51311588 -0.60566067 199.58736536 
    21935 -0.56721279 0.25285516 -0.78379458 180.32146015 
    21936 Axis 0.87310090 0.43725352 -0.21564829 
    21937 Axis point 0.00000000 17.50072967 129.70992213 
    21938 Rotation angle (degrees) 150.55107240 
    21939 Shift along axis 216.22818489 
    21940  
    21941 
    21942 > fitmap #5 inMap #4 resolution 17 metric correlation
    21943 
    21944 Fit map RNAFramework.pdb map 17 in map
    21945 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21946 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21947 steps = 48, shift = 1.02, angle = 1.66 degrees 
    21948  
    21949 Position of RNAFramework.pdb map 17 (#6) relative to
    21950 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21951 Matrix rotation and translation 
    21952 0.54099961 0.83245657 -0.11973122 191.86136635 
    21953 0.61467700 -0.48853802 -0.61927604 199.41065427 
    21954 -0.57401361 0.26143205 -0.77599078 181.24345343 
    21955 Axis 0.86802045 0.44773791 -0.21464220 
    21956 Axis point 0.00000000 14.46689987 130.39816036 
    21957 Rotation angle (degrees) 149.51529223 
    21958 Shift along axis 216.92080372 
    21959  
    21960 Average map value = 0.2964 for 10778 atoms, 7110 outside contour 
    21961 
    21962 > fitmap #5 inMap #4 resolution 17 metric correlation
    21963 
    21964 Fit map RNAFramework.pdb map 17 in map
    21965 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    21966 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    21967 steps = 40, shift = 0.00973, angle = 0.0307 degrees 
    21968  
    21969 Position of RNAFramework.pdb map 17 (#6) relative to
    21970 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    21971 Matrix rotation and translation 
    21972 0.54087348 0.83260798 -0.11924728 191.85193381 
    21973 0.61485079 -0.48813034 -0.61942497 199.40788416 
    21974 -0.57394634 0.26171123 -0.77594643 181.24412686 
    21975 Axis 0.86796898 0.44790428 -0.21450315 
    21976 Axis point 0.00000000 14.42519211 130.38564208 
    21977 Rotation angle (degrees) 149.49689370 
    21978 Shift along axis 216.95973680 
    21979  
    21980 Average map value = 0.2964 for 10778 atoms, 7109 outside contour 
    21981 
    21982 > ui mousemode right "translate selected models"
    21983 
    21984 > select add #5
    21985 
    21986 10778 atoms, 11624 bonds, 336 residues, 1 model selected 
    21987 
    21988 > view matrix models
    21989 > #5,0.22993,-0.044138,0.9722,187.89,0.80333,-0.55528,-0.21521,189.85,0.54935,0.83049,-0.092221,160.32
    21990 
    21991 > fitmap #5 inMap #4
    21992 
    21993 Fit molecule RNAFramework.pdb (#5) to map
    21994 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    21995 average map value = 0.2972, steps = 56 
    21996 shifted from previous position = 3.49 
    21997 rotated from previous position = 1.7 degrees 
    21998 atoms outside contour = 7101, contour level = 0.28119 
    21999  
    22000 Position of RNAFramework.pdb (#5) relative to
    22001 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22002 Matrix rotation and translation 
    22003 0.55540555 0.82013447 -0.13749255 192.25241663 
    22004 0.60803015 -0.51330197 -0.60565704 199.58586284 
    22005 -0.56729535 0.25278565 -0.78375725 180.32511278 
    22006 Axis 0.87312888 0.43715585 -0.21573300 
    22007 Axis point 0.00000000 17.51188320 129.72355337 
    22008 Rotation angle (degrees) 150.55486513 
    22009 Shift along axis 216.20918756 
    22010  
    22011 
    22012 > fitmap #5 inMap #4
    22013 
    22014 Fit molecule RNAFramework.pdb (#5) to map
    22015 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    22016 average map value = 0.2104, steps = 216 
    22017 shifted from previous position = 13 
    22018 rotated from previous position = 35.2 degrees 
    22019 atoms outside contour = 8308, contour level = 0.28119 
    22020  
    22021 Position of RNAFramework.pdb (#5) relative to
    22022 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22023 Matrix rotation and translation 
    22024 0.78737904 0.39003429 -0.47739666 196.93981582 
    22025 0.12407595 -0.85882283 -0.49701966 189.00051463 
    22026 -0.60385380 0.33210939 -0.72461297 220.45219657 
    22027 Axis 0.94232583 0.14372169 -0.30226828 
    22028 Axis point 0.00000000 46.93759140 162.47402637 
    22029 Rotation angle (degrees) 153.90010315 
    22030 Shift along axis 146.10924251 
    22031  
    22032 
    22033 > fitmap #5 inMap #4
    22034 
    22035 Fit molecule RNAFramework.pdb (#5) to map
    22036 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) using 10778 atoms 
    22037 average map value = 0.2104, steps = 36 
    22038 shifted from previous position = 0.0294 
    22039 rotated from previous position = 0.2 degrees 
    22040 atoms outside contour = 8312, contour level = 0.28119 
    22041  
    22042 Position of RNAFramework.pdb (#5) relative to
    22043 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22044 Matrix rotation and translation 
    22045 0.78772803 0.38714958 -0.47916576 196.93391207 
    22046 0.12186099 -0.86039826 -0.49483813 188.96790474 
    22047 -0.60384970 0.33140623 -0.72493826 220.45395526 
    22048 Axis 0.94244763 0.14221953 -0.30259887 
    22049 Axis point 0.00000000 47.22208192 162.44766850 
    22050 Rotation angle (degrees) 154.00133103 
    22051 Shift along axis 145.76570748 
    22052  
    22053 
    22054 > fitmap #5 inMap #4 resolution 17 metric correlation
    22055 
    22056 Fit map RNAFramework.pdb map 17 in map
    22057 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22058 correlation = 0.477, correlation about mean = 0.2347, overlap = 52.98 
    22059 steps = 56, shift = 4.78, angle = 3.76 degrees 
    22060  
    22061 Position of RNAFramework.pdb map 17 (#6) relative to
    22062 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22063 Matrix rotation and translation 
    22064 0.79938045 0.36171954 -0.47973945 196.70162229 
    22065 0.13808676 -0.88770016 -0.43922718 188.88431905 
    22066 -0.58474178 0.28486394 -0.75955883 225.36203808 
    22067 Axis 0.94642727 0.13724387 -0.29230045 
    22068 Axis point 0.00000000 52.01797343 160.78938897 
    22069 Rotation angle (degrees) 157.50894276 
    22070 Shift along axis 146.21356859 
    22071  
    22072 Average map value = 0.1997 for 10778 atoms, 8347 outside contour 
    22073 
    22074 > fitmap #5 inMap #4 resolution 17 metric correlation
    22075 
    22076 Fit map RNAFramework.pdb map 17 in map
    22077 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22078 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22079 steps = 44, shift = 0.186, angle = 1.13 degrees 
    22080  
    22081 Position of RNAFramework.pdb map 17 (#6) relative to
    22082 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22083 Matrix rotation and translation 
    22084 0.54094682 0.83252257 -0.11951047 191.85557728 
    22085 0.61475838 -0.48835783 -0.61933736 199.40983424 
    22086 -0.57397615 0.26155853 -0.77597583 181.24365590 
    22087 Axis 0.86799869 0.44781185 -0.21457590 
    22088 Axis point 0.00000000 14.44943411 130.39180246 
    22089 Rotation angle (degrees) 149.50725416 
    22090 Shift along axis 216.93795632 
    22091  
    22092 Average map value = 0.2964 for 10778 atoms, 7109 outside contour 
    22093 
    22094 > fitmap #5 inMap #4 resolution 17 metric correlation
    22095 
    22096 Fit map RNAFramework.pdb map 17 in map
    22097 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22098 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22099 steps = 40, shift = 0.00634, angle = 0.0182 degrees 
    22100  
    22101 Position of RNAFramework.pdb map 17 (#6) relative to
    22102 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22103 Matrix rotation and translation 
    22104 0.54084288 0.83262758 -0.11924906 191.84912828 
    22105 0.61485013 -0.48810064 -0.61944902 199.40790391 
    22106 -0.57397583 0.26170430 -0.77592692 181.24330054 
    22107 Axis 0.86795881 0.44791763 -0.21451642 
    22108 Axis point 0.00000000 14.42196792 130.38722077 
    22109 Rotation angle (degrees) 149.49584275 
    22110 Shift along axis 216.95579380 
    22111  
    22112 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22113 
    22114 > fitmap #5 inMap #4 resolution 17 metric correlation
    22115 
    22116 Fit map RNAFramework.pdb map 17 in map
    22117 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22118 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22119 steps = 40, shift = 0.00203, angle = 0.0023 degrees 
    22120  
    22121 Position of RNAFramework.pdb map 17 (#6) relative to
    22122 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22123 Matrix rotation and translation 
    22124 0.54084264 0.83263339 -0.11920958 191.84725275 
    22125 0.61486284 -0.48807683 -0.61945517 199.40826084 
    22126 -0.57396244 0.26173024 -0.77592808 181.24289006 
    22127 Axis 0.86795789 0.44792654 -0.21450158 
    22128 Axis point 0.00000000 14.42047144 130.38543274 
    22129 Rotation angle (degrees) 149.49457785 
    22130 Shift along axis 216.95870083 
    22131  
    22132 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22133 
    22134 > fitmap #5 inMap #4 resolution 17 metric correlation
    22135 
    22136 Fit map RNAFramework.pdb map 17 in map
    22137 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22138 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22139 steps = 40, shift = 0.000358, angle = 0.00117 degrees 
    22140  
    22141 Position of RNAFramework.pdb map 17 (#6) relative to
    22142 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22143 Matrix rotation and translation 
    22144 0.54084496 0.83263478 -0.11918929 191.84695318 
    22145 0.61486954 -0.48806712 -0.61945617 199.40828950 
    22146 -0.57395308 0.26174390 -0.77593040 181.24286248 
    22147 Axis 0.86795823 0.44793003 -0.21449288 
    22148 Axis point 0.00000000 14.41976627 130.38444462 
    22149 Rotation angle (degrees) 149.49402927 
    22150 Shift along axis 216.96080068 
    22151  
    22152 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22153 
    22154 > fitmap #5 inMap #4 resolution 17 metric correlation
    22155 
    22156 Fit map RNAFramework.pdb map 17 in map
    22157 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22158 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22159 steps = 40, shift = 0.000259, angle = 0.000663 degrees 
    22160  
    22161 Position of RNAFramework.pdb map 17 (#6) relative to
    22162 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22163 Matrix rotation and translation 
    22164 0.54084141 0.83263556 -0.11920001 191.84667913 
    22165 0.61486597 -0.48806989 -0.61945753 199.40832108 
    22166 -0.57396025 0.26173626 -0.77592766 181.24273156 
    22167 Axis 0.86795727 0.44792923 -0.21449845 
    22168 Axis point 0.00000000 14.41997907 130.38503433 
    22169 Rotation angle (degrees) 149.49423220 
    22170 Shift along axis 216.95925097 
    22171  
    22172 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22173 
    22174 > fitmap #5 inMap #4 resolution 17 metric correlation
    22175 
    22176 Fit map RNAFramework.pdb map 17 in map
    22177 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22178 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22179 steps = 40, shift = 0.00353, angle = 0.00325 degrees 
    22180  
    22181 Position of RNAFramework.pdb map 17 (#6) relative to
    22182 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22183 Matrix rotation and translation 
    22184 0.54087932 0.83260992 -0.11920710 191.85036867 
    22185 0.61486297 -0.48811193 -0.61942738 199.40820990 
    22186 -0.57392773 0.26173944 -0.77595065 181.24371919 
    22187 Axis 0.86797004 0.44791052 -0.21448586 
    22188 Axis point 0.00000000 14.42431742 130.38350612 
    22189 Rotation angle (degrees) 149.49576238 
    22190 Shift along axis 216.96319128 
    22191  
    22192 Average map value = 0.2964 for 10778 atoms, 7110 outside contour 
    22193 
    22194 > fitmap #5 inMap #4 resolution 17 metric correlation
    22195 
    22196 Fit map RNAFramework.pdb map 17 in map
    22197 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22198 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22199 steps = 40, shift = 0.00096, angle = 0.00315 degrees 
    22200  
    22201 Position of RNAFramework.pdb map 17 (#6) relative to
    22202 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22203 Matrix rotation and translation 
    22204 0.54084389 0.83262923 -0.11923295 191.84912932 
    22205 0.61485566 -0.48809220 -0.61945019 199.40789190 
    22206 -0.57396896 0.26171481 -0.77592846 181.24339144 
    22207 Axis 0.86795883 0.44792080 -0.21450976 
    22208 Axis point 0.00000000 14.42121484 130.38653895 
    22209 Rotation angle (degrees) 149.49539581 
    22210 Shift along axis 216.95761036 
    22211  
    22212 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22213 
    22214 > fitmap #5 inMap #4 resolution 17 metric correlation
    22215 
    22216 Fit map RNAFramework.pdb map 17 in map
    22217 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22218 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22219 steps = 40, shift = 0.00111, angle = 0.000549 degrees 
    22220  
    22221 Position of RNAFramework.pdb map 17 (#6) relative to
    22222 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22223 Matrix rotation and translation 
    22224 0.54084632 0.83262898 -0.11922370 191.84813175 
    22225 0.61485822 -0.48808892 -0.61945023 199.40813743 
    22226 -0.57396393 0.26172171 -0.77592985 181.24307166 
    22227 Axis 0.86795941 0.44792173 -0.21450545 
    22228 Axis point 0.00000000 14.42143490 130.38586551 
    22229 Rotation angle (degrees) 149.49515287 
    22230 Shift along axis 216.95800301 
    22231  
    22232 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22233 
    22234 > fitmap #5 inMap #4 resolution 17 metric correlation
    22235 
    22236 Fit map RNAFramework.pdb map 17 in map
    22237 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22238 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22239 steps = 40, shift = 0.000943, angle = 0.000889 degrees 
    22240  
    22241 Position of RNAFramework.pdb map 17 (#6) relative to
    22242 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22243 Matrix rotation and translation 
    22244 0.54084333 0.83263295 -0.11920953 191.84722489 
    22245 0.61486276 -0.48807745 -0.61945477 199.40825512 
    22246 -0.57396188 0.26173048 -0.77592841 181.24286137 
    22247 Axis 0.86795811 0.44792623 -0.21450132 
    22248 Axis point 0.00000000 14.42056209 130.38537745 
    22249 Rotation angle (degrees) 149.49459234 
    22250 Shift along axis 216.95870828 
    22251  
    22252 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22253 
    22254 > fitmap #5 inMap #4 resolution 17 metric correlation
    22255 
    22256 Fit map RNAFramework.pdb map 17 in map
    22257 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22258 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22259 steps = 40, shift = 0.000912, angle = 0.00146 degrees 
    22260  
    22261 Position of RNAFramework.pdb map 17 (#6) relative to
    22262 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22263 Matrix rotation and translation 
    22264 0.54085711 0.83262648 -0.11919217 191.84823056 
    22265 0.61486840 -0.48808097 -0.61944639 199.40825573 
    22266 -0.57394284 0.26174450 -0.77593777 181.24318618 
    22267 Axis 0.86796234 0.44792390 -0.21448906 
    22268 Axis point 0.00000000 14.42116625 130.38398585 
    22269 Rotation angle (degrees) 149.49454104 
    22270 Shift along axis 216.96208106 
    22271  
    22272 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22273 
    22274 > fitmap #5 inMap #4 resolution 17 metric correlation
    22275 
    22276 Fit map RNAFramework.pdb map 17 in map
    22277 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22278 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22279 steps = 40, shift = 0.00127, angle = 0.00311 degrees 
    22280  
    22281 Position of RNAFramework.pdb map 17 (#6) relative to
    22282 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22283 Matrix rotation and translation 
    22284 0.54085172 0.83262227 -0.11924603 191.84932821 
    22285 0.61485090 -0.48810764 -0.61944274 199.40803090 
    22286 -0.57396667 0.26170816 -0.77593240 181.24334307 
    22287 Axis 0.86796169 0.44791431 -0.21451173 
    22288 Axis point 0.00000000 14.42300300 130.38656906 
    22289 Rotation angle (degrees) 149.49604753 
    22290 Shift along axis 216.95675399 
    22291  
    22292 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22293 
    22294 > fitmap #5 inMap #4 resolution 17 metric correlation
    22295 
    22296 Fit map RNAFramework.pdb map 17 in map
    22297 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22298 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22299 steps = 40, shift = 0.00141, angle = 0.00163 degrees 
    22300  
    22301 Position of RNAFramework.pdb map 17 (#6) relative to
    22302 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22303 Matrix rotation and translation 
    22304 0.54084527 0.83263009 -0.11922068 191.84795393 
    22305 0.61485919 -0.48808606 -0.61945152 199.40815399 
    22306 -0.57396387 0.26172351 -0.77592929 181.24303210 
    22307 Axis 0.86795900 0.44792287 -0.21450473 
    22308 Axis point 0.00000000 14.42118199 130.38579198 
    22309 Rotation angle (degrees) 149.49501846 
    22310 Shift along axis 216.95814257 
    22311  
    22312 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22313 
    22314 > fitmap #5 inMap #4 resolution 17 metric correlation
    22315 
    22316 Fit map RNAFramework.pdb map 17 in map
    22317 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22318 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22319 steps = 40, shift = 0.00105, angle = 0.00102 degrees 
    22320  
    22321 Position of RNAFramework.pdb map 17 (#6) relative to
    22322 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22323 Matrix rotation and translation 
    22324 0.54084143 0.83263490 -0.11920454 191.84694273 
    22325 0.61486455 -0.48807264 -0.61945677 199.40827726 
    22326 -0.57396175 0.26173324 -0.77592757 181.24279610 
    22327 Axis 0.86795738 0.44792822 -0.21450014 
    22328 Axis point 0.00000000 14.42013725 130.38524700 
    22329 Rotation angle (degrees) 149.49438117 
    22330 Shift along axis 216.95895819 
    22331  
    22332 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22333 
    22334 > fitmap #5 inMap #4 resolution 17 metric correlation
    22335 
    22336 Fit map RNAFramework.pdb map 17 in map
    22337 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22338 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22339 steps = 40, shift = 0.000382, angle = 0.00104 degrees 
    22340  
    22341 Position of RNAFramework.pdb map 17 (#6) relative to
    22342 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22343 Matrix rotation and translation 
    22344 0.54084884 0.83263229 -0.11918908 191.84737096 
    22345 0.61486964 -0.48807091 -0.61945308 199.40827476 
    22346 -0.57394931 0.26174475 -0.77593290 181.24298994 
    22347 Axis 0.86795952 0.44792833 -0.21449119 
    22348 Axis point 0.00000000 14.42015239 130.38425616 
    22349 Rotation angle (degrees) 149.49416555 
    22350 Shift along axis 216.96134499 
    22351  
    22352 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22353 
    22354 > fitmap #5 inMap #4 resolution 17 metric correlation
    22355 
    22356 Fit map RNAFramework.pdb map 17 in map
    22357 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22358 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22359 steps = 40, shift = 0.000518, angle = 0.00181 degrees 
    22360  
    22361 Position of RNAFramework.pdb map 17 (#6) relative to
    22362 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22363 Matrix rotation and translation 
    22364 0.54084675 0.83262917 -0.11922039 191.84781297 
    22365 0.61485919 -0.48808734 -0.61945051 199.40823649 
    22366 -0.57396248 0.26172405 -0.77593014 181.24299163 
    22367 Axis 0.86795948 0.44792226 -0.21450406 
    22368 Axis point 0.00000000 14.42144856 130.38567009 
    22369 Rotation angle (degrees) 149.49505484 
    22370 Shift along axis 216.95815883 
    22371  
    22372 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22373 
    22374 > fitmap #5 inMap #4 resolution 17 metric correlation
    22375 
    22376 Fit map RNAFramework.pdb map 17 in map
    22377 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22378 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22379 steps = 40, shift = 0.0011, angle = 0.00134 degrees 
    22380  
    22381 Position of RNAFramework.pdb map 17 (#6) relative to
    22382 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22383 Matrix rotation and translation 
    22384 0.54084110 0.83263583 -0.11919956 191.84673964 
    22385 0.61486616 -0.48806934 -0.61945778 199.40831346 
    22386 -0.57396034 0.26173646 -0.77592754 181.24274739 
    22387 Axis 0.86795716 0.44792947 -0.21449838 
    22388 Axis point 0.00000000 14.41989291 130.38504366 
    22389 Rotation angle (degrees) 149.49421119 
    22390 Shift along axis 216.95933604 
    22391  
    22392 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22393 
    22394 > fitmap #5 inMap #4 resolution 17 metric correlation
    22395 
    22396 Fit map RNAFramework.pdb map 17 in map
    22397 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22398 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22399 steps = 40, shift = 0.000632, angle = 0.000877 degrees 
    22400  
    22401 Position of RNAFramework.pdb map 17 (#6) relative to
    22402 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22403 Matrix rotation and translation 
    22404 0.54084974 0.83263162 -0.11918968 191.84741982 
    22405 0.61486930 -0.48807212 -0.61945247 199.40829615 
    22406 -0.57394882 0.26174464 -0.77593329 181.24298162 
    22407 Axis 0.86795983 0.44792778 -0.21449111 
    22408 Axis point 0.00000000 14.42029338 130.38423480 
    22409 Rotation angle (degrees) 149.49420480 
    22410 Shift along axis 216.96136115 
    22411  
    22412 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22413 
    22414 > fitmap #5 inMap #4 resolution 17 metric correlation
    22415 
    22416 Fit map RNAFramework.pdb map 17 in map
    22417 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22418 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22419 steps = 40, shift = 0.000871, angle = 0.00205 degrees 
    22420  
    22421 Position of RNAFramework.pdb map 17 (#6) relative to
    22422 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22423 Matrix rotation and translation 
    22424 0.54084772 0.83262786 -0.11922515 191.84819051 
    22425 0.61485765 -0.48809115 -0.61944904 199.40817568 
    22426 -0.57396321 0.26172111 -0.77593058 181.24309888 
    22427 Axis 0.86795990 0.44792077 -0.21450546 
    22428 Axis point 0.00000000 14.42169807 130.38585849 
    22429 Rotation angle (degrees) 149.49524065 
    22430 Shift along axis 216.95796520 
    22431  
    22432 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22433 
    22434 > fitmap #5 inMap #4 resolution 17 metric correlation
    22435 
    22436 Fit map RNAFramework.pdb map 17 in map
    22437 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22438 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22439 steps = 40, shift = 0.00108, angle = 0.00113 degrees 
    22440  
    22441 Position of RNAFramework.pdb map 17 (#6) relative to
    22442 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22443 Matrix rotation and translation 
    22444 0.54084262 0.83263367 -0.11920773 191.84713235 
    22445 0.61486363 -0.48807579 -0.61945521 199.40827394 
    22446 -0.57396162 0.26173129 -0.77592833 181.24286239 
    22447 Axis 0.86795785 0.44792698 -0.21450081 
    22448 Axis point 0.00000000 14.42042919 130.38532229 
    22449 Rotation angle (degrees) 149.49453435 
    22450 Shift along axis 216.95882934 
    22451  
    22452 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22453 
    22454 > fitmap #5 inMap #4 resolution 17 metric correlation
    22455 
    22456 Fit map RNAFramework.pdb map 17 in map
    22457 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22458 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22459 steps = 40, shift = 0.00104, angle = 0.00144 degrees 
    22460  
    22461 Position of RNAFramework.pdb map 17 (#6) relative to
    22462 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22463 Matrix rotation and translation 
    22464 0.54085759 0.83262611 -0.11919261 191.84827535 
    22465 0.61486815 -0.48808166 -0.61944610 199.40823386 
    22466 -0.57394267 0.26174440 -0.77593793 181.24319170 
    22467 Axis 0.86796250 0.44792358 -0.21448909 
    22468 Axis point 0.00000000 14.42122011 130.38398575 
    22469 Rotation angle (degrees) 149.49456213 
    22470 Shift along axis 216.96207150 
    22471  
    22472 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22473 
    22474 > fitmap #5 inMap #4 resolution 17 metric correlation
    22475 
    22476 Fit map RNAFramework.pdb map 17 in map
    22477 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22478 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22479 steps = 40, shift = 0.0011, angle = 0.00297 degrees 
    22480  
    22481 Position of RNAFramework.pdb map 17 (#6) relative to
    22482 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22483 Matrix rotation and translation 
    22484 0.54085065 0.83262329 -0.11924381 191.84919892 
    22485 0.61485139 -0.48810512 -0.61944424 199.40805287 
    22486 -0.57396716 0.26170961 -0.77593154 181.24331988 
    22487 Axis 0.86796127 0.44791526 -0.21451143 
    22488 Axis point 0.00000000 14.42275240 130.38656560 
    22489 Rotation angle (degrees) 149.49591809 
    22490 Shift along axis 216.95682057 
    22491  
    22492 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22493 
    22494 > fitmap #5 inMap #4 resolution 17 metric correlation
    22495 
    22496 Fit map RNAFramework.pdb map 17 in map
    22497 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22498 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22499 steps = 40, shift = 0.000932, angle = 0.00113 degrees 
    22500  
    22501 Position of RNAFramework.pdb map 17 (#6) relative to
    22502 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22503 Matrix rotation and translation 
    22504 0.54084702 0.83262824 -0.11922564 191.84829541 
    22505 0.61485747 -0.48809073 -0.61944954 199.40810953 
    22506 -0.57396406 0.26172068 -0.77593011 181.24312513 
    22507 Axis 0.86795968 0.44792097 -0.21450594 
    22508 Axis point 0.00000000 14.42156047 130.38593918 
    22509 Rotation angle (degrees) 149.49522935 
    22510 Shift along axis 216.95793149 
    22511  
    22512 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22513 
    22514 > fitmap #5 inMap #4 resolution 17 metric correlation
    22515 
    22516 Fit map RNAFramework.pdb map 17 in map
    22517 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22518 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22519 steps = 40, shift = 0.00131, angle = 0.00127 degrees 
    22520  
    22521 Position of RNAFramework.pdb map 17 (#6) relative to
    22522 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22523 Matrix rotation and translation 
    22524 0.54084199 0.83263436 -0.11920579 191.84703448 
    22525 0.61486422 -0.48807398 -0.61945605 199.40827817 
    22526 -0.57396158 0.26173247 -0.77592796 181.24282532 
    22527 Axis 0.86795759 0.44792769 -0.21450035 
    22528 Axis point 0.00000000 14.42026347 130.38526978 
    22529 Rotation angle (degrees) 149.49444702 
    22530 Shift along axis 216.95893120 
    22531  
    22532 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22533 
    22534 > fitmap #5 inMap #4 resolution 17 metric correlation
    22535 
    22536 Fit map RNAFramework.pdb map 17 in map
    22537 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22538 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22539 steps = 40, shift = 0.000974, angle = 0.00135 degrees 
    22540  
    22541 Position of RNAFramework.pdb map 17 (#6) relative to
    22542 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22543 Matrix rotation and translation 
    22544 0.54085567 0.83262751 -0.11919148 191.84809711 
    22545 0.61486874 -0.48807916 -0.61944748 199.40825011 
    22546 -0.57394384 0.26174458 -0.77593700 181.24314542 
    22547 Axis 0.86796185 0.44792471 -0.21448934 
    22548 Axis point 0.00000000 14.42098128 130.38401539 
    22549 Rotation angle (degrees) 149.49447715 
    22550 Shift along axis 216.96198924 
    22551  
    22552 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22553 
    22554 > fitmap #5 inMap #4 resolution 17 metric correlation
    22555 
    22556 Fit map RNAFramework.pdb map 17 in map
    22557 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22558 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22559 steps = 40, shift = 0.0013, angle = 0.00306 degrees 
    22560  
    22561 Position of RNAFramework.pdb map 17 (#6) relative to
    22562 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22563 Matrix rotation and translation 
    22564 0.54085119 0.83262285 -0.11924443 191.84923567 
    22565 0.61485114 -0.48810601 -0.61944379 199.40803921 
    22566 -0.57396692 0.26170935 -0.77593181 181.24331198 
    22567 Axis 0.86796146 0.44791488 -0.21451146 
    22568 Axis point 0.00000000 14.42284082 130.38655411 
    22569 Rotation angle (degrees) 149.49595276 
    22570 Shift along axis 216.95680208 
    22571  
    22572 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22573 
    22574 > fitmap #5 inMap #4 resolution 17 metric correlation
    22575 
    22576 Fit map RNAFramework.pdb map 17 in map
    22577 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22578 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22579 steps = 40, shift = 0.00095, angle = 0.00116 degrees 
    22580  
    22581 Position of RNAFramework.pdb map 17 (#6) relative to
    22582 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22583 Matrix rotation and translation 
    22584 0.54084697 0.83262823 -0.11922599 191.84830663 
    22585 0.61485736 -0.48809090 -0.61944952 199.40810479 
    22586 -0.57396423 0.26172043 -0.77593007 181.24313648 
    22587 Axis 0.86795967 0.44792091 -0.21450610 
    22588 Axis point 0.00000000 14.42156660 130.38596192 
    22589 Rotation angle (degrees) 149.49523914 
    22590 Shift along axis 216.95789594 
    22591  
    22592 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22593 
    22594 > fitmap #5 inMap #4 resolution 17 metric correlation
    22595 
    22596 Fit map RNAFramework.pdb map 17 in map
    22597 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22598 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22599 steps = 40, shift = 0.00131, angle = 0.00126 degrees 
    22600  
    22601 Position of RNAFramework.pdb map 17 (#6) relative to
    22602 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22603 Matrix rotation and translation 
    22604 0.54084230 0.83263411 -0.11920613 191.84704842 
    22605 0.61486395 -0.48807442 -0.61945597 199.40828242 
    22606 -0.57396158 0.26173245 -0.77592797 181.24282479 
    22607 Axis 0.86795769 0.44792746 -0.21450042 
    22608 Axis point 0.00000000 14.42030549 130.38528050 
    22609 Rotation angle (degrees) 149.49445488 
    22610 Shift along axis 216.95890582 
    22611  
    22612 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22613 
    22614 > fitmap #5 inMap #4 resolution 17 metric correlation
    22615 
    22616 Fit map RNAFramework.pdb map 17 in map
    22617 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22618 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22619 steps = 40, shift = 0.000874, angle = 0.0013 degrees 
    22620  
    22621 Position of RNAFramework.pdb map 17 (#6) relative to
    22622 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22623 Matrix rotation and translation 
    22624 0.54085492 0.83262807 -0.11919102 191.84800197 
    22625 0.61486873 -0.48807805 -0.61944836 199.40824673 
    22626 -0.57394456 0.26174488 -0.77593636 181.24313058 
    22627 Axis 0.86796158 0.44792514 -0.21448955 
    22628 Axis point 0.00000000 14.42085949 130.38405343 
    22629 Rotation angle (degrees) 149.49442111 
    22630 Shift along axis 216.96190381 
    22631  
    22632 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22633 
    22634 > fitmap #5 inMap #4 resolution 17 metric correlation
    22635 
    22636 Fit map RNAFramework.pdb map 17 in map
    22637 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22638 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22639 steps = 40, shift = 0.0012, angle = 0.00283 degrees 
    22640  
    22641 Position of RNAFramework.pdb map 17 (#6) relative to
    22642 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22643 Matrix rotation and translation 
    22644 0.54085050 0.83262391 -0.11924012 191.84904806 
    22645 0.61485274 -0.48810284 -0.61944470 199.40805519 
    22646 -0.57396585 0.26171187 -0.77593175 181.24328624 
    22647 Axis 0.86796115 0.44791617 -0.21451002 
    22648 Axis point 0.00000000 14.42259036 130.38638896 
    22649 Rotation angle (degrees) 149.49580949 
    22650 Shift along axis 216.95711099 
    22651  
    22652 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22653 
    22654 > fitmap #5 inMap #4 resolution 17 metric correlation
    22655 
    22656 Fit map RNAFramework.pdb map 17 in map
    22657 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22658 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22659 steps = 40, shift = 0.00111, angle = 0.00124 degrees 
    22660  
    22661 Position of RNAFramework.pdb map 17 (#6) relative to
    22662 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22663 Matrix rotation and translation 
    22664 0.54084553 0.83262990 -0.11922085 191.84796995 
    22665 0.61485890 -0.48808633 -0.61945160 199.40815977 
    22666 -0.57396393 0.26172364 -0.77592920 181.24303327 
    22667 Axis 0.86795907 0.44792269 -0.21450479 
    22668 Axis point 0.00000000 14.42120062 130.38580813 
    22669 Rotation angle (degrees) 149.49501350 
    22670 Shift along axis 216.95812759 
    22671  
    22672 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22673 
    22674 > fitmap #5 inMap #4 resolution 17 metric correlation
    22675 
    22676 Fit map RNAFramework.pdb map 17 in map
    22677 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22678 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22679 steps = 40, shift = 0.000908, angle = 0.000858 degrees 
    22680  
    22681 Position of RNAFramework.pdb map 17 (#6) relative to
    22682 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22683 Matrix rotation and translation 
    22684 0.54084247 0.83263384 -0.11920723 191.84709129 
    22685 0.61486339 -0.48807515 -0.61945594 199.40826356 
    22686 -0.57396201 0.26173193 -0.77592782 181.24284079 
    22687 Axis 0.86795776 0.44792712 -0.21450085 
    22688 Axis point 0.00000000 14.42034490 130.38534174 
    22689 Rotation angle (degrees) 149.49447852 
    22690 Shift along axis 216.95879781 
    22691  
    22692 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22693 
    22694 > fitmap #5 inMap #4 resolution 17 metric correlation
    22695 
    22696 Fit map RNAFramework.pdb map 17 in map
    22697 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22698 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22699 steps = 40, shift = 0.000109, angle = 0.00111 degrees 
    22700  
    22701 Position of RNAFramework.pdb map 17 (#6) relative to
    22702 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22703 Matrix rotation and translation 
    22704 0.54084742 0.83263324 -0.11918889 191.84723048 
    22705 0.61486975 -0.48806940 -0.61945417 199.40829519 
    22706 -0.57395054 0.26174456 -0.77593205 181.24295048 
    22707 Axis 0.86795905 0.44792902 -0.21449168 
    22708 Axis point 0.00000000 14.42000542 130.38431491 
    22709 Rotation angle (degrees) 149.49411242 
    22710 Shift along axis 216.96119685 
    22711  
    22712 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22713 
    22714 > fitmap #5 inMap #4 resolution 17 metric correlation
    22715 
    22716 Fit map RNAFramework.pdb map 17 in map
    22717 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22718 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22719 steps = 40, shift = 0.0004, angle = 0.0016 degrees 
    22720  
    22721 Position of RNAFramework.pdb map 17 (#6) relative to
    22722 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22723 Matrix rotation and translation 
    22724 0.54084525 0.83263069 -0.11921662 191.84755744 
    22725 0.61486048 -0.48808361 -0.61945217 199.40823061 
    22726 -0.57396252 0.26172618 -0.77592939 181.24292934 
    22727 Axis 0.86795890 0.44792379 -0.21450322 
    22728 Axis point 0.00000000 14.42111333 130.38557121 
    22729 Rotation angle (degrees) 149.49488709 
    22730 Shift along axis 216.95829336 
    22731  
    22732 Average map value = 0.2964 for 10778 atoms, 7112 outside contour 
    22733 
    22734 > fitmap #5 inMap #4 resolution 17 metric correlation
    22735 
    22736 Fit map RNAFramework.pdb map 17 in map
    22737 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22738 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22739 steps = 40, shift = 0.000922, angle = 0.00155 degrees 
    22740  
    22741 Position of RNAFramework.pdb map 17 (#6) relative to
    22742 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22743 Matrix rotation and translation 
    22744 0.54084155 0.83263675 -0.11919102 191.84667045 
    22745 0.61486908 -0.48806477 -0.61945848 199.40829814 
    22746 -0.57395678 0.26174202 -0.77592829 181.24278280 
    22747 Axis 0.86795714 0.44793119 -0.21449489 
    22748 Axis point 0.00000000 14.41949856 130.38467662 
    22749 Rotation angle (degrees) 149.49397040 
    22750 Shift along axis 216.96023270 
    22751  
    22752 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22753 
    22754 > fitmap #5 inMap #4 resolution 17 metric correlation
    22755 
    22756 Fit map RNAFramework.pdb map 17 in map
    22757 cryosparc_P12_J2806_class_07_00122_volume.mrc using 1791 points 
    22758 correlation = 0.6082, correlation about mean = 0.3944, overlap = 81.77 
    22759 steps = 40, shift = 0.000561, angle = 0.000553 degrees 
    22760  
    22761 Position of RNAFramework.pdb map 17 (#6) relative to
    22762 cryosparc_P12_J2806_class_07_00122_volume.mrc (#4) coordinates: 
    22763 Matrix rotation and translation 
    22764 0.54084837 0.83263251 -0.11918975 191.84727275 
    22765 0.61486911 -0.48807069 -0.61945378 199.40827772 
    22766 -0.57395033 0.26174449 -0.77593223 181.24291406 
    22767 Axis 0.86795936 0.44792837 -0.21449177 
    22768 Axis point 0.00000000 14.42012968 130.38430405 
    22769 Rotation angle (degrees) 149.49414240 
    22770 Shift along axis 216.96114727 
    22771  
    22772 Average map value = 0.2964 for 10778 atoms, 7111 outside contour 
    22773 
    22774 > close #5
    22775 
    22776 > select #5:85-99
    22777 
    22778 Nothing selected 
    22779 
    22780 > close
    22781 
    22782 > open
    22783 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_09_00122_volume.mrc
    22784 
    22785 Opened cryosparc_P12_J2809_class_09_00122_volume.mrc as #1, grid size
    22786 128,128,128, pixel 2.96, shown at level 0.0565, step 1, values float32 
    22787 
    22788 > open
    22789 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_08_00122_volume.mrc
    22790 
    22791 Opened cryosparc_P12_J2809_class_08_00122_volume.mrc as #2, grid size
    22792 128,128,128, pixel 2.96, shown at level 0.0538, step 1, values float32 
    22793 
    22794 > open
    22795 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_07_00122_volume.mrc
    22796 
    22797 Opened cryosparc_P12_J2809_class_07_00122_volume.mrc as #3, grid size
    22798 128,128,128, pixel 2.96, shown at level 0.0478, step 1, values float32 
    22799 
    22800 > open
    22801 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_06_00122_volume.mrc
    22802 
    22803 Opened cryosparc_P12_J2809_class_06_00122_volume.mrc as #4, grid size
    22804 128,128,128, pixel 2.96, shown at level 0.0482, step 1, values float32 
    22805 
    22806 > open
    22807 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_05_00122_volume.mrc
    22808 
    22809 Opened cryosparc_P12_J2809_class_05_00122_volume.mrc as #5, grid size
    22810 128,128,128, pixel 2.96, shown at level 0.0828, step 1, values float32 
    22811 
    22812 > open
    22813 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_04_00122_volume.mrc
    22814 
    22815 Opened cryosparc_P12_J2809_class_04_00122_volume.mrc as #6, grid size
    22816 128,128,128, pixel 2.96, shown at level 0.0787, step 1, values float32 
    22817 
    22818 > open
    22819 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_03_00122_volume.mrc
    22820 
    22821 Opened cryosparc_P12_J2809_class_03_00122_volume.mrc as #7, grid size
    22822 128,128,128, pixel 2.96, shown at level 0.0597, step 1, values float32 
    22823 
    22824 > open
    22825 > /Users/francescappadoo/Downloads/cryosparc_P12_J2809_class_02_00122_volume.mrc
    22826 
    22827 Opened cryosparc_P12_J2809_class_02_00122_volume.mrc as #8, grid size
    22828 128,128,128, pixel 2.96, shown at level 0.0642, step 1, values float32 
    22829 
    22830 > select #5:85-99
    22831 
    22832 Nothing selected 
    22833 
    22834 > tile
    22835 
    22836 8 models tiled 
    22837 
    22838 > surface dust #1 size 29.6
    22839 
    22840 > surface dust #2 size 29.6
    22841 
    22842 > surface dust #3 size 29.6
    22843 
    22844 > surface dust #4 size 29.6
    22845 
    22846 > surface dust #5 size 29.6
    22847 
    22848 > surface dust #6 size 29.6
    22849 
    22850 > surface dust #7 size 29.6
    22851 
    22852 > surface dust #8 size 29.6
    22853 
    22854 > volume #1 level 0.2191
    22855 
    22856 > tile
    22857 
    22858 8 models tiled 
    22859 
    22860 > volume #2 level 0.219
    22861 
    22862 > volume #3 level 0.219
    22863 
    22864 > volume #4 level 0.219
    22865 
    22866 > volume #5 level 0.219
    22867 
    22868 > volume #6 level 0.219
    22869 
    22870 > volume #7 level 0.219
    22871 
    22872 > volume #8 level 0.219
    22873 
    22874 > tile
    22875 
    22876 8 models tiled 
    22877 
    22878 > tile
    22879 
    22880 8 models tiled 
    22881 
    22882 > volume #8 level 0.45
    22883 
    22884 > volume #8 level 0.7
    22885 
    22886 > volume #8 level 0.6
    22887 
    22888 > volume #7 level 0.6
    22889 
    22890 > volume #6 level 0.6
    22891 
    22892 > volume #5 level 0.6
    22893 
    22894 > volume #3 level 0.1
    22895 
    22896 > volume #3 level 0.2
    22897 
    22898 > volume #3 level 0.15
    22899 
    22900 > close
    22901 
    22902 > open
    22903 > /Users/francescappadoo/Downloads/cryosparc_P12_J2810_class_02_00102_volume.mrc
    22904 
    22905 Opened cryosparc_P12_J2810_class_02_00102_volume.mrc as #1, grid size
    22906 128,128,128, pixel 2.96, shown at level 0.0627, step 1, values float32 
     2848
     2849[deleted to fit within ticket limits]
    229072850
    229082851> open