| 3084 | | Error processing trigger "changes": |
| 3085 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3086 | | range |
| 3087 | | |
| 3088 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3089 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3090 | | update_targets |
| 3091 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3092 | | indices, params) |
| 3093 | | |
| 3094 | | See log for complete Python traceback. |
| 3095 | | |
| 3096 | | Traceback (most recent call last): |
| 3097 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3098 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3099 | | return self._func(self._name, data) |
| 3100 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3101 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3102 | | _tug_changed_cb |
| 3103 | | self.sim_handler.update_tuggables(all_changeds) |
| 3104 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3105 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3106 | | update_tuggables |
| 3107 | | force.update_targets(tuggables.sim_indices, |
| 3108 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3109 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3110 | | update_targets |
| 3111 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3112 | | indices, params) |
| 3113 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3114 | | range |
| 3115 | | |
| 3116 | | Error processing trigger "changes": |
| 3117 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3118 | | range |
| 3119 | | |
| 3120 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3121 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3122 | | update_targets |
| 3123 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3124 | | indices, params) |
| 3125 | | |
| 3126 | | See log for complete Python traceback. |
| 3127 | | |
| 3128 | | Traceback (most recent call last): |
| 3129 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3130 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3131 | | return self._func(self._name, data) |
| 3132 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3133 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3134 | | _tug_changed_cb |
| 3135 | | self.sim_handler.update_tuggables(all_changeds) |
| 3136 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3137 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3138 | | update_tuggables |
| 3139 | | force.update_targets(tuggables.sim_indices, |
| 3140 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3141 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3142 | | update_targets |
| 3143 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3144 | | indices, params) |
| 3145 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3146 | | range |
| 3147 | | |
| 3148 | | Error processing trigger "changes": |
| 3149 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3150 | | range |
| 3151 | | |
| 3152 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3153 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3154 | | update_targets |
| 3155 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3156 | | indices, params) |
| 3157 | | |
| 3158 | | See log for complete Python traceback. |
| 3159 | | |
| 3160 | | Traceback (most recent call last): |
| 3161 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3162 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3163 | | return self._func(self._name, data) |
| 3164 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3165 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3166 | | _tug_changed_cb |
| 3167 | | self.sim_handler.update_tuggables(all_changeds) |
| 3168 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3169 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3170 | | update_tuggables |
| 3171 | | force.update_targets(tuggables.sim_indices, |
| 3172 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3173 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3174 | | update_targets |
| 3175 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3176 | | indices, params) |
| 3177 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3178 | | range |
| 3179 | | |
| 3180 | | Error processing trigger "changes": |
| 3181 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3182 | | range |
| 3183 | | |
| 3184 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3185 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3186 | | update_targets |
| 3187 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3188 | | indices, params) |
| 3189 | | |
| 3190 | | See log for complete Python traceback. |
| 3191 | | |
| 3192 | | Traceback (most recent call last): |
| 3193 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3194 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3195 | | return self._func(self._name, data) |
| 3196 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3197 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3198 | | _tug_changed_cb |
| 3199 | | self.sim_handler.update_tuggables(all_changeds) |
| 3200 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3201 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3202 | | update_tuggables |
| 3203 | | force.update_targets(tuggables.sim_indices, |
| 3204 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3205 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3206 | | update_targets |
| 3207 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3208 | | indices, params) |
| 3209 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3210 | | range |
| 3211 | | |
| 3212 | | Error processing trigger "changes": |
| 3213 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3214 | | range |
| 3215 | | |
| 3216 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3217 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3218 | | update_targets |
| 3219 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3220 | | indices, params) |
| 3221 | | |
| 3222 | | See log for complete Python traceback. |
| 3223 | | |
| 3224 | | Traceback (most recent call last): |
| 3225 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3226 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3227 | | return self._func(self._name, data) |
| 3228 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3229 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3230 | | _tug_changed_cb |
| 3231 | | self.sim_handler.update_tuggables(all_changeds) |
| 3232 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3233 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3234 | | update_tuggables |
| 3235 | | force.update_targets(tuggables.sim_indices, |
| 3236 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3237 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3238 | | update_targets |
| 3239 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3240 | | indices, params) |
| 3241 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3242 | | range |
| 3243 | | |
| 3244 | | Error processing trigger "changes": |
| 3245 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3246 | | range |
| 3247 | | |
| 3248 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3249 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3250 | | update_targets |
| 3251 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3252 | | indices, params) |
| 3253 | | |
| 3254 | | See log for complete Python traceback. |
| 3255 | | |
| 3256 | | Traceback (most recent call last): |
| 3257 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3258 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3259 | | return self._func(self._name, data) |
| 3260 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3261 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3262 | | _tug_changed_cb |
| 3263 | | self.sim_handler.update_tuggables(all_changeds) |
| 3264 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3265 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3266 | | update_tuggables |
| 3267 | | force.update_targets(tuggables.sim_indices, |
| 3268 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3269 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3270 | | update_targets |
| 3271 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3272 | | indices, params) |
| 3273 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3274 | | range |
| 3275 | | |
| 3276 | | Error processing trigger "changes": |
| 3277 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3278 | | range |
| 3279 | | |
| 3280 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3281 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3282 | | update_targets |
| 3283 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3284 | | indices, params) |
| 3285 | | |
| 3286 | | See log for complete Python traceback. |
| 3287 | | |
| 3288 | | Traceback (most recent call last): |
| 3289 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3290 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3291 | | return self._func(self._name, data) |
| 3292 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3293 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3294 | | _tug_changed_cb |
| 3295 | | self.sim_handler.update_tuggables(all_changeds) |
| 3296 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3297 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3298 | | update_tuggables |
| 3299 | | force.update_targets(tuggables.sim_indices, |
| 3300 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3301 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3302 | | update_targets |
| 3303 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3304 | | indices, params) |
| 3305 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3306 | | range |
| 3307 | | |
| 3308 | | Error processing trigger "changes": |
| 3309 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3310 | | range |
| 3311 | | |
| 3312 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3313 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3314 | | update_targets |
| 3315 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3316 | | indices, params) |
| 3317 | | |
| 3318 | | See log for complete Python traceback. |
| 3319 | | |
| 3320 | | Traceback (most recent call last): |
| 3321 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3322 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3323 | | return self._func(self._name, data) |
| 3324 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3325 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3326 | | _tug_changed_cb |
| 3327 | | self.sim_handler.update_tuggables(all_changeds) |
| 3328 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3329 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3330 | | update_tuggables |
| 3331 | | force.update_targets(tuggables.sim_indices, |
| 3332 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3333 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3334 | | update_targets |
| 3335 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3336 | | indices, params) |
| 3337 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3338 | | range |
| 3339 | | |
| 3340 | | Error processing trigger "changes": |
| 3341 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3342 | | range |
| 3343 | | |
| 3344 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3345 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3346 | | update_targets |
| 3347 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3348 | | indices, params) |
| 3349 | | |
| 3350 | | See log for complete Python traceback. |
| 3351 | | |
| 3352 | | Traceback (most recent call last): |
| 3353 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3354 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3355 | | return self._func(self._name, data) |
| 3356 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3357 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3358 | | _tug_changed_cb |
| 3359 | | self.sim_handler.update_tuggables(all_changeds) |
| 3360 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3361 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3362 | | update_tuggables |
| 3363 | | force.update_targets(tuggables.sim_indices, |
| 3364 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3365 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3366 | | update_targets |
| 3367 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3368 | | indices, params) |
| 3369 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3370 | | range |
| 3371 | | |
| 3372 | | Error processing trigger "changes": |
| 3373 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3374 | | range |
| 3375 | | |
| 3376 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3377 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3378 | | update_targets |
| 3379 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3380 | | indices, params) |
| 3381 | | |
| 3382 | | See log for complete Python traceback. |
| 3383 | | |
| 3384 | | Traceback (most recent call last): |
| 3385 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3386 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3387 | | return self._func(self._name, data) |
| 3388 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3389 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3390 | | _tug_changed_cb |
| 3391 | | self.sim_handler.update_tuggables(all_changeds) |
| 3392 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3393 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3394 | | update_tuggables |
| 3395 | | force.update_targets(tuggables.sim_indices, |
| 3396 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3397 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3398 | | update_targets |
| 3399 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3400 | | indices, params) |
| 3401 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3402 | | range |
| 3403 | | |
| 3404 | | Error processing trigger "changes": |
| 3405 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3406 | | range |
| 3407 | | |
| 3408 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3409 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3410 | | update_targets |
| 3411 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3412 | | indices, params) |
| 3413 | | |
| 3414 | | See log for complete Python traceback. |
| 3415 | | |
| 3416 | | Traceback (most recent call last): |
| 3417 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3418 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3419 | | return self._func(self._name, data) |
| 3420 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3421 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3422 | | _tug_changed_cb |
| 3423 | | self.sim_handler.update_tuggables(all_changeds) |
| 3424 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3425 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3426 | | update_tuggables |
| 3427 | | force.update_targets(tuggables.sim_indices, |
| 3428 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3429 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3430 | | update_targets |
| 3431 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3432 | | indices, params) |
| 3433 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3434 | | range |
| 3435 | | |
| 3436 | | Error processing trigger "changes": |
| 3437 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3438 | | range |
| 3439 | | |
| 3440 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3441 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3442 | | update_targets |
| 3443 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3444 | | indices, params) |
| 3445 | | |
| 3446 | | See log for complete Python traceback. |
| 3447 | | |
| 3448 | | Traceback (most recent call last): |
| 3449 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3450 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3451 | | return self._func(self._name, data) |
| 3452 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3453 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3454 | | _tug_changed_cb |
| 3455 | | self.sim_handler.update_tuggables(all_changeds) |
| 3456 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3457 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3458 | | update_tuggables |
| 3459 | | force.update_targets(tuggables.sim_indices, |
| 3460 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3461 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3462 | | update_targets |
| 3463 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3464 | | indices, params) |
| 3465 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3466 | | range |
| 3467 | | |
| 3468 | | Error processing trigger "changes": |
| 3469 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3470 | | range |
| 3471 | | |
| 3472 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3473 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3474 | | update_targets |
| 3475 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3476 | | indices, params) |
| 3477 | | |
| 3478 | | See log for complete Python traceback. |
| 3479 | | |
| 3480 | | Traceback (most recent call last): |
| 3481 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3482 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3483 | | return self._func(self._name, data) |
| 3484 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3485 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3486 | | _tug_changed_cb |
| 3487 | | self.sim_handler.update_tuggables(all_changeds) |
| 3488 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3489 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3490 | | update_tuggables |
| 3491 | | force.update_targets(tuggables.sim_indices, |
| 3492 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3493 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3494 | | update_targets |
| 3495 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3496 | | indices, params) |
| 3497 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3498 | | range |
| 3499 | | |
| 3500 | | Error processing trigger "changes": |
| 3501 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3502 | | range |
| 3503 | | |
| 3504 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3505 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3506 | | update_targets |
| 3507 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3508 | | indices, params) |
| 3509 | | |
| 3510 | | See log for complete Python traceback. |
| 3511 | | |
| 3512 | | Traceback (most recent call last): |
| 3513 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3514 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3515 | | return self._func(self._name, data) |
| 3516 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3517 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3518 | | _tug_changed_cb |
| 3519 | | self.sim_handler.update_tuggables(all_changeds) |
| 3520 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3521 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3522 | | update_tuggables |
| 3523 | | force.update_targets(tuggables.sim_indices, |
| 3524 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3525 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3526 | | update_targets |
| 3527 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3528 | | indices, params) |
| 3529 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3530 | | range |
| 3531 | | |
| 3532 | | Error processing trigger "changes": |
| 3533 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3534 | | range |
| 3535 | | |
| 3536 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3537 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3538 | | update_targets |
| 3539 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3540 | | indices, params) |
| 3541 | | |
| 3542 | | See log for complete Python traceback. |
| 3543 | | |
| 3544 | | Traceback (most recent call last): |
| 3545 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3546 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3547 | | return self._func(self._name, data) |
| 3548 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3549 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3550 | | _tug_changed_cb |
| 3551 | | self.sim_handler.update_tuggables(all_changeds) |
| 3552 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3553 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3554 | | update_tuggables |
| 3555 | | force.update_targets(tuggables.sim_indices, |
| 3556 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3557 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3558 | | update_targets |
| 3559 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3560 | | indices, params) |
| 3561 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3562 | | range |
| 3563 | | |
| 3564 | | Error processing trigger "changes": |
| 3565 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3566 | | range |
| 3567 | | |
| 3568 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3569 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3570 | | update_targets |
| 3571 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3572 | | indices, params) |
| 3573 | | |
| 3574 | | See log for complete Python traceback. |
| 3575 | | |
| 3576 | | Traceback (most recent call last): |
| 3577 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3578 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3579 | | return self._func(self._name, data) |
| 3580 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3581 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3582 | | _tug_changed_cb |
| 3583 | | self.sim_handler.update_tuggables(all_changeds) |
| 3584 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3585 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3586 | | update_tuggables |
| 3587 | | force.update_targets(tuggables.sim_indices, |
| 3588 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3589 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3590 | | update_targets |
| 3591 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3592 | | indices, params) |
| 3593 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3594 | | range |
| 3595 | | |
| 3596 | | Error processing trigger "changes": |
| 3597 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3598 | | range |
| 3599 | | |
| 3600 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3601 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3602 | | update_targets |
| 3603 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3604 | | indices, params) |
| 3605 | | |
| 3606 | | See log for complete Python traceback. |
| 3607 | | |
| 3608 | | Traceback (most recent call last): |
| 3609 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3610 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3611 | | return self._func(self._name, data) |
| 3612 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3613 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3614 | | _tug_changed_cb |
| 3615 | | self.sim_handler.update_tuggables(all_changeds) |
| 3616 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3617 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3618 | | update_tuggables |
| 3619 | | force.update_targets(tuggables.sim_indices, |
| 3620 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3621 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3622 | | update_targets |
| 3623 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3624 | | indices, params) |
| 3625 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3626 | | range |
| 3627 | | |
| 3628 | | Error processing trigger "changes": |
| 3629 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3630 | | range |
| 3631 | | |
| 3632 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3633 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3634 | | update_targets |
| 3635 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3636 | | indices, params) |
| 3637 | | |
| 3638 | | See log for complete Python traceback. |
| 3639 | | |
| 3640 | | Traceback (most recent call last): |
| 3641 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3642 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3643 | | return self._func(self._name, data) |
| 3644 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3645 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3646 | | _tug_changed_cb |
| 3647 | | self.sim_handler.update_tuggables(all_changeds) |
| 3648 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3649 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3650 | | update_tuggables |
| 3651 | | force.update_targets(tuggables.sim_indices, |
| 3652 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3653 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3654 | | update_targets |
| 3655 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3656 | | indices, params) |
| 3657 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3658 | | range |
| 3659 | | |
| 3660 | | Error processing trigger "changes": |
| 3661 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3662 | | range |
| 3663 | | |
| 3664 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3665 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3666 | | update_targets |
| 3667 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3668 | | indices, params) |
| 3669 | | |
| 3670 | | See log for complete Python traceback. |
| 3671 | | |
| 3672 | | Traceback (most recent call last): |
| 3673 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3674 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3675 | | return self._func(self._name, data) |
| 3676 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3677 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3678 | | _tug_changed_cb |
| 3679 | | self.sim_handler.update_tuggables(all_changeds) |
| 3680 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3681 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3682 | | update_tuggables |
| 3683 | | force.update_targets(tuggables.sim_indices, |
| 3684 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3685 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3686 | | update_targets |
| 3687 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3688 | | indices, params) |
| 3689 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3690 | | range |
| 3691 | | |
| 3692 | | Error processing trigger "changes": |
| 3693 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3694 | | range |
| 3695 | | |
| 3696 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3697 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3698 | | update_targets |
| 3699 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3700 | | indices, params) |
| 3701 | | |
| 3702 | | See log for complete Python traceback. |
| 3703 | | |
| 3704 | | Traceback (most recent call last): |
| 3705 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3706 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3707 | | return self._func(self._name, data) |
| 3708 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3709 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3710 | | _tug_changed_cb |
| 3711 | | self.sim_handler.update_tuggables(all_changeds) |
| 3712 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3713 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3714 | | update_tuggables |
| 3715 | | force.update_targets(tuggables.sim_indices, |
| 3716 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3717 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3718 | | update_targets |
| 3719 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3720 | | indices, params) |
| 3721 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3722 | | range |
| 3723 | | |
| 3724 | | Error processing trigger "changes": |
| 3725 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3726 | | range |
| 3727 | | |
| 3728 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3729 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3730 | | update_targets |
| 3731 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3732 | | indices, params) |
| 3733 | | |
| 3734 | | See log for complete Python traceback. |
| 3735 | | |
| 3736 | | Traceback (most recent call last): |
| 3737 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3738 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3739 | | return self._func(self._name, data) |
| 3740 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3741 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3742 | | _tug_changed_cb |
| 3743 | | self.sim_handler.update_tuggables(all_changeds) |
| 3744 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3745 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3746 | | update_tuggables |
| 3747 | | force.update_targets(tuggables.sim_indices, |
| 3748 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3749 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3750 | | update_targets |
| 3751 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3752 | | indices, params) |
| 3753 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3754 | | range |
| 3755 | | |
| 3756 | | Error processing trigger "changes": |
| 3757 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3758 | | range |
| 3759 | | |
| 3760 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3761 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3762 | | update_targets |
| 3763 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3764 | | indices, params) |
| 3765 | | |
| 3766 | | See log for complete Python traceback. |
| 3767 | | |
| 3768 | | Traceback (most recent call last): |
| 3769 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3770 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3771 | | return self._func(self._name, data) |
| 3772 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3773 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3774 | | _tug_changed_cb |
| 3775 | | self.sim_handler.update_tuggables(all_changeds) |
| 3776 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3777 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3778 | | update_tuggables |
| 3779 | | force.update_targets(tuggables.sim_indices, |
| 3780 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3781 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3782 | | update_targets |
| 3783 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3784 | | indices, params) |
| 3785 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3786 | | range |
| 3787 | | |
| 3788 | | Error processing trigger "changes": |
| 3789 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3790 | | range |
| 3791 | | |
| 3792 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3793 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3794 | | update_targets |
| 3795 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3796 | | indices, params) |
| 3797 | | |
| 3798 | | See log for complete Python traceback. |
| 3799 | | |
| 3800 | | Traceback (most recent call last): |
| 3801 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3802 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3803 | | return self._func(self._name, data) |
| 3804 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3805 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3806 | | _tug_changed_cb |
| 3807 | | self.sim_handler.update_tuggables(all_changeds) |
| 3808 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3809 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3810 | | update_tuggables |
| 3811 | | force.update_targets(tuggables.sim_indices, |
| 3812 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3813 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3814 | | update_targets |
| 3815 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3816 | | indices, params) |
| 3817 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3818 | | range |
| 3819 | | |
| 3820 | | Error processing trigger "changes": |
| 3821 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3822 | | range |
| 3823 | | |
| 3824 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3825 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3826 | | update_targets |
| 3827 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3828 | | indices, params) |
| 3829 | | |
| 3830 | | See log for complete Python traceback. |
| 3831 | | |
| 3832 | | Traceback (most recent call last): |
| 3833 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3834 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3835 | | return self._func(self._name, data) |
| 3836 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3837 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3838 | | _tug_changed_cb |
| 3839 | | self.sim_handler.update_tuggables(all_changeds) |
| 3840 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3841 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3842 | | update_tuggables |
| 3843 | | force.update_targets(tuggables.sim_indices, |
| 3844 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3845 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3846 | | update_targets |
| 3847 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3848 | | indices, params) |
| 3849 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3850 | | range |
| 3851 | | |
| 3852 | | Error processing trigger "changes": |
| 3853 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3854 | | range |
| 3855 | | |
| 3856 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3857 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3858 | | update_targets |
| 3859 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3860 | | indices, params) |
| 3861 | | |
| 3862 | | See log for complete Python traceback. |
| 3863 | | |
| 3864 | | Traceback (most recent call last): |
| 3865 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3866 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3867 | | return self._func(self._name, data) |
| 3868 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3869 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3870 | | _tug_changed_cb |
| 3871 | | self.sim_handler.update_tuggables(all_changeds) |
| 3872 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3873 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3874 | | update_tuggables |
| 3875 | | force.update_targets(tuggables.sim_indices, |
| 3876 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3877 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3878 | | update_targets |
| 3879 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3880 | | indices, params) |
| 3881 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3882 | | range |
| 3883 | | |
| 3884 | | Error processing trigger "changes": |
| 3885 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3886 | | range |
| 3887 | | |
| 3888 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3889 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3890 | | update_targets |
| 3891 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3892 | | indices, params) |
| 3893 | | |
| 3894 | | See log for complete Python traceback. |
| 3895 | | |
| 3896 | | Traceback (most recent call last): |
| 3897 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3898 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3899 | | return self._func(self._name, data) |
| 3900 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3901 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3902 | | _tug_changed_cb |
| 3903 | | self.sim_handler.update_tuggables(all_changeds) |
| 3904 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3905 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3906 | | update_tuggables |
| 3907 | | force.update_targets(tuggables.sim_indices, |
| 3908 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3909 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3910 | | update_targets |
| 3911 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3912 | | indices, params) |
| 3913 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3914 | | range |
| 3915 | | |
| 3916 | | Error processing trigger "changes": |
| 3917 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3918 | | range |
| 3919 | | |
| 3920 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3921 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3922 | | update_targets |
| 3923 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3924 | | indices, params) |
| 3925 | | |
| 3926 | | See log for complete Python traceback. |
| 3927 | | |
| 3928 | | Traceback (most recent call last): |
| 3929 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3930 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3931 | | return self._func(self._name, data) |
| 3932 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3933 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3934 | | _tug_changed_cb |
| 3935 | | self.sim_handler.update_tuggables(all_changeds) |
| 3936 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3937 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3938 | | update_tuggables |
| 3939 | | force.update_targets(tuggables.sim_indices, |
| 3940 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3941 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3942 | | update_targets |
| 3943 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3944 | | indices, params) |
| 3945 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3946 | | range |
| 3947 | | |
| 3948 | | Error processing trigger "changes": |
| 3949 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3950 | | range |
| 3951 | | |
| 3952 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3953 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3954 | | update_targets |
| 3955 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3956 | | indices, params) |
| 3957 | | |
| 3958 | | See log for complete Python traceback. |
| 3959 | | |
| 3960 | | Traceback (most recent call last): |
| 3961 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3962 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3963 | | return self._func(self._name, data) |
| 3964 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3965 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3966 | | _tug_changed_cb |
| 3967 | | self.sim_handler.update_tuggables(all_changeds) |
| 3968 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3969 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 3970 | | update_tuggables |
| 3971 | | force.update_targets(tuggables.sim_indices, |
| 3972 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3973 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3974 | | update_targets |
| 3975 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3976 | | indices, params) |
| 3977 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3978 | | range |
| 3979 | | |
| 3980 | | Error processing trigger "changes": |
| 3981 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 3982 | | range |
| 3983 | | |
| 3984 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3985 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 3986 | | update_targets |
| 3987 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 3988 | | indices, params) |
| 3989 | | |
| 3990 | | See log for complete Python traceback. |
| 3991 | | |
| 3992 | | Traceback (most recent call last): |
| 3993 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 3994 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 3995 | | return self._func(self._name, data) |
| 3996 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 3997 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 3998 | | _tug_changed_cb |
| 3999 | | self.sim_handler.update_tuggables(all_changeds) |
| 4000 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4001 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4002 | | update_tuggables |
| 4003 | | force.update_targets(tuggables.sim_indices, |
| 4004 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4005 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4006 | | update_targets |
| 4007 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4008 | | indices, params) |
| 4009 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4010 | | range |
| 4011 | | |
| 4012 | | Error processing trigger "changes": |
| 4013 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4014 | | range |
| 4015 | | |
| 4016 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4017 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4018 | | update_targets |
| 4019 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4020 | | indices, params) |
| 4021 | | |
| 4022 | | See log for complete Python traceback. |
| 4023 | | |
| 4024 | | Traceback (most recent call last): |
| 4025 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4026 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4027 | | return self._func(self._name, data) |
| 4028 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4029 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4030 | | _tug_changed_cb |
| 4031 | | self.sim_handler.update_tuggables(all_changeds) |
| 4032 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4033 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4034 | | update_tuggables |
| 4035 | | force.update_targets(tuggables.sim_indices, |
| 4036 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4037 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4038 | | update_targets |
| 4039 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4040 | | indices, params) |
| 4041 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4042 | | range |
| 4043 | | |
| 4044 | | Error processing trigger "changes": |
| 4045 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4046 | | range |
| 4047 | | |
| 4048 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4049 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4050 | | update_targets |
| 4051 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4052 | | indices, params) |
| 4053 | | |
| 4054 | | See log for complete Python traceback. |
| 4055 | | |
| 4056 | | Traceback (most recent call last): |
| 4057 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4058 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4059 | | return self._func(self._name, data) |
| 4060 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4061 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4062 | | _tug_changed_cb |
| 4063 | | self.sim_handler.update_tuggables(all_changeds) |
| 4064 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4065 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4066 | | update_tuggables |
| 4067 | | force.update_targets(tuggables.sim_indices, |
| 4068 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4069 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4070 | | update_targets |
| 4071 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4072 | | indices, params) |
| 4073 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4074 | | range |
| 4075 | | |
| 4076 | | Error processing trigger "changes": |
| 4077 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4078 | | range |
| 4079 | | |
| 4080 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4081 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4082 | | update_targets |
| 4083 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4084 | | indices, params) |
| 4085 | | |
| 4086 | | See log for complete Python traceback. |
| 4087 | | |
| 4088 | | Traceback (most recent call last): |
| 4089 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4090 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4091 | | return self._func(self._name, data) |
| 4092 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4093 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4094 | | _tug_changed_cb |
| 4095 | | self.sim_handler.update_tuggables(all_changeds) |
| 4096 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4097 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4098 | | update_tuggables |
| 4099 | | force.update_targets(tuggables.sim_indices, |
| 4100 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4101 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4102 | | update_targets |
| 4103 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4104 | | indices, params) |
| 4105 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4106 | | range |
| 4107 | | |
| 4108 | | Error processing trigger "changes": |
| 4109 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4110 | | range |
| 4111 | | |
| 4112 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4113 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4114 | | update_targets |
| 4115 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4116 | | indices, params) |
| 4117 | | |
| 4118 | | See log for complete Python traceback. |
| 4119 | | |
| 4120 | | Traceback (most recent call last): |
| 4121 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4122 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4123 | | return self._func(self._name, data) |
| 4124 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4125 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4126 | | _tug_changed_cb |
| 4127 | | self.sim_handler.update_tuggables(all_changeds) |
| 4128 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4129 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4130 | | update_tuggables |
| 4131 | | force.update_targets(tuggables.sim_indices, |
| 4132 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4133 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4134 | | update_targets |
| 4135 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4136 | | indices, params) |
| 4137 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4138 | | range |
| 4139 | | |
| 4140 | | Error processing trigger "changes": |
| 4141 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4142 | | range |
| 4143 | | |
| 4144 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4145 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4146 | | update_targets |
| 4147 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4148 | | indices, params) |
| 4149 | | |
| 4150 | | See log for complete Python traceback. |
| 4151 | | |
| 4152 | | Traceback (most recent call last): |
| 4153 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4154 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4155 | | return self._func(self._name, data) |
| 4156 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4157 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4158 | | _tug_changed_cb |
| 4159 | | self.sim_handler.update_tuggables(all_changeds) |
| 4160 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4161 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4162 | | update_tuggables |
| 4163 | | force.update_targets(tuggables.sim_indices, |
| 4164 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4165 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4166 | | update_targets |
| 4167 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4168 | | indices, params) |
| 4169 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4170 | | range |
| 4171 | | |
| 4172 | | Error processing trigger "changes": |
| 4173 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4174 | | range |
| 4175 | | |
| 4176 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4177 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4178 | | update_targets |
| 4179 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4180 | | indices, params) |
| 4181 | | |
| 4182 | | See log for complete Python traceback. |
| 4183 | | |
| 4184 | | Traceback (most recent call last): |
| 4185 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4186 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4187 | | return self._func(self._name, data) |
| 4188 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4189 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4190 | | _tug_changed_cb |
| 4191 | | self.sim_handler.update_tuggables(all_changeds) |
| 4192 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4193 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4194 | | update_tuggables |
| 4195 | | force.update_targets(tuggables.sim_indices, |
| 4196 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4197 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4198 | | update_targets |
| 4199 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4200 | | indices, params) |
| 4201 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4202 | | range |
| 4203 | | |
| 4204 | | Error processing trigger "changes": |
| 4205 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4206 | | range |
| 4207 | | |
| 4208 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4209 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4210 | | update_targets |
| 4211 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4212 | | indices, params) |
| 4213 | | |
| 4214 | | See log for complete Python traceback. |
| 4215 | | |
| 4216 | | Traceback (most recent call last): |
| 4217 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4218 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4219 | | return self._func(self._name, data) |
| 4220 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4221 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4222 | | _tug_changed_cb |
| 4223 | | self.sim_handler.update_tuggables(all_changeds) |
| 4224 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4225 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4226 | | update_tuggables |
| 4227 | | force.update_targets(tuggables.sim_indices, |
| 4228 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4229 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4230 | | update_targets |
| 4231 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4232 | | indices, params) |
| 4233 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4234 | | range |
| 4235 | | |
| 4236 | | Error processing trigger "changes": |
| 4237 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4238 | | range |
| 4239 | | |
| 4240 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4241 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4242 | | update_targets |
| 4243 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4244 | | indices, params) |
| 4245 | | |
| 4246 | | See log for complete Python traceback. |
| 4247 | | |
| 4248 | | Traceback (most recent call last): |
| 4249 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4250 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4251 | | return self._func(self._name, data) |
| 4252 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4253 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4254 | | _tug_changed_cb |
| 4255 | | self.sim_handler.update_tuggables(all_changeds) |
| 4256 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4257 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4258 | | update_tuggables |
| 4259 | | force.update_targets(tuggables.sim_indices, |
| 4260 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4261 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4262 | | update_targets |
| 4263 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4264 | | indices, params) |
| 4265 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4266 | | range |
| 4267 | | |
| 4268 | | Error processing trigger "changes": |
| 4269 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4270 | | range |
| 4271 | | |
| 4272 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4273 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4274 | | update_targets |
| 4275 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4276 | | indices, params) |
| 4277 | | |
| 4278 | | See log for complete Python traceback. |
| 4279 | | |
| 4280 | | Traceback (most recent call last): |
| 4281 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4282 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4283 | | return self._func(self._name, data) |
| 4284 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4285 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4286 | | _tug_changed_cb |
| 4287 | | self.sim_handler.update_tuggables(all_changeds) |
| 4288 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4289 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4290 | | update_tuggables |
| 4291 | | force.update_targets(tuggables.sim_indices, |
| 4292 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4293 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4294 | | update_targets |
| 4295 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4296 | | indices, params) |
| 4297 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4298 | | range |
| 4299 | | |
| 4300 | | Error processing trigger "changes": |
| 4301 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4302 | | range |
| 4303 | | |
| 4304 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4305 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4306 | | update_targets |
| 4307 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4308 | | indices, params) |
| 4309 | | |
| 4310 | | See log for complete Python traceback. |
| 4311 | | |
| 4312 | | Traceback (most recent call last): |
| 4313 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4314 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4315 | | return self._func(self._name, data) |
| 4316 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4317 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4318 | | _tug_changed_cb |
| 4319 | | self.sim_handler.update_tuggables(all_changeds) |
| 4320 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4321 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4322 | | update_tuggables |
| 4323 | | force.update_targets(tuggables.sim_indices, |
| 4324 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4325 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4326 | | update_targets |
| 4327 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4328 | | indices, params) |
| 4329 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4330 | | range |
| 4331 | | |
| 4332 | | Error processing trigger "changes": |
| 4333 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4334 | | range |
| 4335 | | |
| 4336 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4337 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4338 | | update_targets |
| 4339 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4340 | | indices, params) |
| 4341 | | |
| 4342 | | See log for complete Python traceback. |
| 4343 | | |
| 4344 | | Traceback (most recent call last): |
| 4345 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4346 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4347 | | return self._func(self._name, data) |
| 4348 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4349 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4350 | | _tug_changed_cb |
| 4351 | | self.sim_handler.update_tuggables(all_changeds) |
| 4352 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4353 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4354 | | update_tuggables |
| 4355 | | force.update_targets(tuggables.sim_indices, |
| 4356 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4357 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4358 | | update_targets |
| 4359 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4360 | | indices, params) |
| 4361 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4362 | | range |
| 4363 | | |
| 4364 | | Error processing trigger "changes": |
| 4365 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4366 | | range |
| 4367 | | |
| 4368 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4369 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4370 | | update_targets |
| 4371 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4372 | | indices, params) |
| 4373 | | |
| 4374 | | See log for complete Python traceback. |
| 4375 | | |
| 4376 | | Traceback (most recent call last): |
| 4377 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4378 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4379 | | return self._func(self._name, data) |
| 4380 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4381 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4382 | | _tug_changed_cb |
| 4383 | | self.sim_handler.update_tuggables(all_changeds) |
| 4384 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4385 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4386 | | update_tuggables |
| 4387 | | force.update_targets(tuggables.sim_indices, |
| 4388 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4389 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4390 | | update_targets |
| 4391 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4392 | | indices, params) |
| 4393 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4394 | | range |
| 4395 | | |
| 4396 | | Error processing trigger "changes": |
| 4397 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4398 | | range |
| 4399 | | |
| 4400 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4401 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4402 | | update_targets |
| 4403 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4404 | | indices, params) |
| 4405 | | |
| 4406 | | See log for complete Python traceback. |
| 4407 | | |
| 4408 | | Traceback (most recent call last): |
| 4409 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4410 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4411 | | return self._func(self._name, data) |
| 4412 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4413 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4414 | | _tug_changed_cb |
| 4415 | | self.sim_handler.update_tuggables(all_changeds) |
| 4416 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4417 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4418 | | update_tuggables |
| 4419 | | force.update_targets(tuggables.sim_indices, |
| 4420 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4421 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4422 | | update_targets |
| 4423 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4424 | | indices, params) |
| 4425 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4426 | | range |
| 4427 | | |
| 4428 | | Error processing trigger "changes": |
| 4429 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4430 | | range |
| 4431 | | |
| 4432 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4433 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4434 | | update_targets |
| 4435 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4436 | | indices, params) |
| 4437 | | |
| 4438 | | See log for complete Python traceback. |
| 4439 | | |
| 4440 | | Traceback (most recent call last): |
| 4441 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4442 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4443 | | return self._func(self._name, data) |
| 4444 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4445 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4446 | | _tug_changed_cb |
| 4447 | | self.sim_handler.update_tuggables(all_changeds) |
| 4448 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4449 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4450 | | update_tuggables |
| 4451 | | force.update_targets(tuggables.sim_indices, |
| 4452 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4453 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4454 | | update_targets |
| 4455 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4456 | | indices, params) |
| 4457 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4458 | | range |
| 4459 | | |
| 4460 | | Error processing trigger "changes": |
| 4461 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4462 | | range |
| 4463 | | |
| 4464 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4465 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4466 | | update_targets |
| 4467 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4468 | | indices, params) |
| 4469 | | |
| 4470 | | See log for complete Python traceback. |
| 4471 | | |
| 4472 | | Traceback (most recent call last): |
| 4473 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4474 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4475 | | return self._func(self._name, data) |
| 4476 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4477 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4478 | | _tug_changed_cb |
| 4479 | | self.sim_handler.update_tuggables(all_changeds) |
| 4480 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4481 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4482 | | update_tuggables |
| 4483 | | force.update_targets(tuggables.sim_indices, |
| 4484 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4485 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4486 | | update_targets |
| 4487 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4488 | | indices, params) |
| 4489 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4490 | | range |
| 4491 | | |
| 4492 | | Error processing trigger "changes": |
| 4493 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4494 | | range |
| 4495 | | |
| 4496 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4497 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4498 | | update_targets |
| 4499 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4500 | | indices, params) |
| 4501 | | |
| 4502 | | See log for complete Python traceback. |
| 4503 | | |
| 4504 | | Traceback (most recent call last): |
| 4505 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4506 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4507 | | return self._func(self._name, data) |
| 4508 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4509 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4510 | | _tug_changed_cb |
| 4511 | | self.sim_handler.update_tuggables(all_changeds) |
| 4512 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4513 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4514 | | update_tuggables |
| 4515 | | force.update_targets(tuggables.sim_indices, |
| 4516 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4517 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4518 | | update_targets |
| 4519 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4520 | | indices, params) |
| 4521 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4522 | | range |
| 4523 | | |
| 4524 | | Error processing trigger "changes": |
| 4525 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4526 | | range |
| 4527 | | |
| 4528 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4529 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4530 | | update_targets |
| 4531 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4532 | | indices, params) |
| 4533 | | |
| 4534 | | See log for complete Python traceback. |
| 4535 | | |
| 4536 | | Traceback (most recent call last): |
| 4537 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4538 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4539 | | return self._func(self._name, data) |
| 4540 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4541 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4542 | | _tug_changed_cb |
| 4543 | | self.sim_handler.update_tuggables(all_changeds) |
| 4544 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4545 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4546 | | update_tuggables |
| 4547 | | force.update_targets(tuggables.sim_indices, |
| 4548 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4549 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4550 | | update_targets |
| 4551 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4552 | | indices, params) |
| 4553 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4554 | | range |
| 4555 | | |
| 4556 | | Error processing trigger "changes": |
| 4557 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4558 | | range |
| 4559 | | |
| 4560 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4561 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4562 | | update_targets |
| 4563 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4564 | | indices, params) |
| 4565 | | |
| 4566 | | See log for complete Python traceback. |
| 4567 | | |
| 4568 | | Traceback (most recent call last): |
| 4569 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4570 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4571 | | return self._func(self._name, data) |
| 4572 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4573 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4574 | | _tug_changed_cb |
| 4575 | | self.sim_handler.update_tuggables(all_changeds) |
| 4576 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4577 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4578 | | update_tuggables |
| 4579 | | force.update_targets(tuggables.sim_indices, |
| 4580 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4581 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4582 | | update_targets |
| 4583 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4584 | | indices, params) |
| 4585 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4586 | | range |
| 4587 | | |
| 4588 | | Error processing trigger "changes": |
| 4589 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4590 | | range |
| 4591 | | |
| 4592 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4593 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4594 | | update_targets |
| 4595 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4596 | | indices, params) |
| 4597 | | |
| 4598 | | See log for complete Python traceback. |
| 4599 | | |
| 4600 | | Traceback (most recent call last): |
| 4601 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4602 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4603 | | return self._func(self._name, data) |
| 4604 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4605 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4606 | | _tug_changed_cb |
| 4607 | | self.sim_handler.update_tuggables(all_changeds) |
| 4608 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4609 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4610 | | update_tuggables |
| 4611 | | force.update_targets(tuggables.sim_indices, |
| 4612 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4613 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4614 | | update_targets |
| 4615 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4616 | | indices, params) |
| 4617 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4618 | | range |
| 4619 | | |
| 4620 | | Error processing trigger "changes": |
| 4621 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4622 | | range |
| 4623 | | |
| 4624 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4625 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4626 | | update_targets |
| 4627 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4628 | | indices, params) |
| 4629 | | |
| 4630 | | See log for complete Python traceback. |
| 4631 | | |
| 4632 | | Traceback (most recent call last): |
| 4633 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4634 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4635 | | return self._func(self._name, data) |
| 4636 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4637 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4638 | | _tug_changed_cb |
| 4639 | | self.sim_handler.update_tuggables(all_changeds) |
| 4640 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4641 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4642 | | update_tuggables |
| 4643 | | force.update_targets(tuggables.sim_indices, |
| 4644 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4645 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4646 | | update_targets |
| 4647 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4648 | | indices, params) |
| 4649 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4650 | | range |
| 4651 | | |
| 4652 | | Error processing trigger "changes": |
| 4653 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4654 | | range |
| 4655 | | |
| 4656 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4657 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4658 | | update_targets |
| 4659 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4660 | | indices, params) |
| 4661 | | |
| 4662 | | See log for complete Python traceback. |
| 4663 | | |
| 4664 | | Traceback (most recent call last): |
| 4665 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4666 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4667 | | return self._func(self._name, data) |
| 4668 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4669 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4670 | | _tug_changed_cb |
| 4671 | | self.sim_handler.update_tuggables(all_changeds) |
| 4672 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4673 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4674 | | update_tuggables |
| 4675 | | force.update_targets(tuggables.sim_indices, |
| 4676 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4677 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4678 | | update_targets |
| 4679 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4680 | | indices, params) |
| 4681 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4682 | | range |
| 4683 | | |
| 4684 | | Error processing trigger "changes": |
| 4685 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4686 | | range |
| 4687 | | |
| 4688 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4689 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4690 | | update_targets |
| 4691 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4692 | | indices, params) |
| 4693 | | |
| 4694 | | See log for complete Python traceback. |
| 4695 | | |
| 4696 | | Traceback (most recent call last): |
| 4697 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4698 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4699 | | return self._func(self._name, data) |
| 4700 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4701 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4702 | | _tug_changed_cb |
| 4703 | | self.sim_handler.update_tuggables(all_changeds) |
| 4704 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4705 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4706 | | update_tuggables |
| 4707 | | force.update_targets(tuggables.sim_indices, |
| 4708 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4709 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4710 | | update_targets |
| 4711 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4712 | | indices, params) |
| 4713 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4714 | | range |
| 4715 | | |
| 4716 | | Error processing trigger "changes": |
| 4717 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4718 | | range |
| 4719 | | |
| 4720 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4721 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4722 | | update_targets |
| 4723 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4724 | | indices, params) |
| 4725 | | |
| 4726 | | See log for complete Python traceback. |
| 4727 | | |
| 4728 | | Traceback (most recent call last): |
| 4729 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4730 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4731 | | return self._func(self._name, data) |
| 4732 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4733 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4734 | | _tug_changed_cb |
| 4735 | | self.sim_handler.update_tuggables(all_changeds) |
| 4736 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4737 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4738 | | update_tuggables |
| 4739 | | force.update_targets(tuggables.sim_indices, |
| 4740 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4741 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4742 | | update_targets |
| 4743 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4744 | | indices, params) |
| 4745 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4746 | | range |
| 4747 | | |
| 4748 | | Error processing trigger "changes": |
| 4749 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4750 | | range |
| 4751 | | |
| 4752 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4753 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4754 | | update_targets |
| 4755 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4756 | | indices, params) |
| 4757 | | |
| 4758 | | See log for complete Python traceback. |
| 4759 | | |
| 4760 | | Traceback (most recent call last): |
| 4761 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4762 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4763 | | return self._func(self._name, data) |
| 4764 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4765 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4766 | | _tug_changed_cb |
| 4767 | | self.sim_handler.update_tuggables(all_changeds) |
| 4768 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4769 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4770 | | update_tuggables |
| 4771 | | force.update_targets(tuggables.sim_indices, |
| 4772 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4773 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4774 | | update_targets |
| 4775 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4776 | | indices, params) |
| 4777 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4778 | | range |
| 4779 | | |
| 4780 | | Error processing trigger "changes": |
| 4781 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4782 | | range |
| 4783 | | |
| 4784 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4785 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4786 | | update_targets |
| 4787 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4788 | | indices, params) |
| 4789 | | |
| 4790 | | See log for complete Python traceback. |
| 4791 | | |
| 4792 | | Traceback (most recent call last): |
| 4793 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4794 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4795 | | return self._func(self._name, data) |
| 4796 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4797 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4798 | | _tug_changed_cb |
| 4799 | | self.sim_handler.update_tuggables(all_changeds) |
| 4800 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4801 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4802 | | update_tuggables |
| 4803 | | force.update_targets(tuggables.sim_indices, |
| 4804 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4805 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4806 | | update_targets |
| 4807 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4808 | | indices, params) |
| 4809 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4810 | | range |
| 4811 | | |
| 4812 | | Error processing trigger "changes": |
| 4813 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4814 | | range |
| 4815 | | |
| 4816 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4817 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4818 | | update_targets |
| 4819 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4820 | | indices, params) |
| 4821 | | |
| 4822 | | See log for complete Python traceback. |
| 4823 | | |
| 4824 | | Traceback (most recent call last): |
| 4825 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4826 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4827 | | return self._func(self._name, data) |
| 4828 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4829 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4830 | | _tug_changed_cb |
| 4831 | | self.sim_handler.update_tuggables(all_changeds) |
| 4832 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4833 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4834 | | update_tuggables |
| 4835 | | force.update_targets(tuggables.sim_indices, |
| 4836 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4837 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4838 | | update_targets |
| 4839 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4840 | | indices, params) |
| 4841 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4842 | | range |
| 4843 | | |
| 4844 | | Error processing trigger "changes": |
| 4845 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4846 | | range |
| 4847 | | |
| 4848 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4849 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4850 | | update_targets |
| 4851 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4852 | | indices, params) |
| 4853 | | |
| 4854 | | See log for complete Python traceback. |
| 4855 | | |
| 4856 | | Traceback (most recent call last): |
| 4857 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4858 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4859 | | return self._func(self._name, data) |
| 4860 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4861 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4862 | | _tug_changed_cb |
| 4863 | | self.sim_handler.update_tuggables(all_changeds) |
| 4864 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4865 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4866 | | update_tuggables |
| 4867 | | force.update_targets(tuggables.sim_indices, |
| 4868 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4869 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4870 | | update_targets |
| 4871 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4872 | | indices, params) |
| 4873 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4874 | | range |
| 4875 | | |
| 4876 | | Error processing trigger "changes": |
| 4877 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4878 | | range |
| 4879 | | |
| 4880 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4881 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4882 | | update_targets |
| 4883 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4884 | | indices, params) |
| 4885 | | |
| 4886 | | See log for complete Python traceback. |
| 4887 | | |
| 4888 | | Traceback (most recent call last): |
| 4889 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4890 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4891 | | return self._func(self._name, data) |
| 4892 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4893 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4894 | | _tug_changed_cb |
| 4895 | | self.sim_handler.update_tuggables(all_changeds) |
| 4896 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4897 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4898 | | update_tuggables |
| 4899 | | force.update_targets(tuggables.sim_indices, |
| 4900 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4901 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4902 | | update_targets |
| 4903 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4904 | | indices, params) |
| 4905 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4906 | | range |
| 4907 | | |
| 4908 | | Error processing trigger "changes": |
| 4909 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4910 | | range |
| 4911 | | |
| 4912 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4913 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4914 | | update_targets |
| 4915 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4916 | | indices, params) |
| 4917 | | |
| 4918 | | See log for complete Python traceback. |
| 4919 | | |
| 4920 | | Traceback (most recent call last): |
| 4921 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4922 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4923 | | return self._func(self._name, data) |
| 4924 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4925 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4926 | | _tug_changed_cb |
| 4927 | | self.sim_handler.update_tuggables(all_changeds) |
| 4928 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4929 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4930 | | update_tuggables |
| 4931 | | force.update_targets(tuggables.sim_indices, |
| 4932 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4933 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4934 | | update_targets |
| 4935 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4936 | | indices, params) |
| 4937 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4938 | | range |
| 4939 | | |
| 4940 | | Error processing trigger "changes": |
| 4941 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4942 | | range |
| 4943 | | |
| 4944 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4945 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4946 | | update_targets |
| 4947 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4948 | | indices, params) |
| 4949 | | |
| 4950 | | See log for complete Python traceback. |
| 4951 | | |
| 4952 | | Traceback (most recent call last): |
| 4953 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4954 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4955 | | return self._func(self._name, data) |
| 4956 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4957 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4958 | | _tug_changed_cb |
| 4959 | | self.sim_handler.update_tuggables(all_changeds) |
| 4960 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4961 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4962 | | update_tuggables |
| 4963 | | force.update_targets(tuggables.sim_indices, |
| 4964 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4965 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4966 | | update_targets |
| 4967 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4968 | | indices, params) |
| 4969 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4970 | | range |
| 4971 | | |
| 4972 | | Error processing trigger "changes": |
| 4973 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 4974 | | range |
| 4975 | | |
| 4976 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4977 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4978 | | update_targets |
| 4979 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 4980 | | indices, params) |
| 4981 | | |
| 4982 | | See log for complete Python traceback. |
| 4983 | | |
| 4984 | | Traceback (most recent call last): |
| 4985 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 4986 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 4987 | | return self._func(self._name, data) |
| 4988 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4989 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 4990 | | _tug_changed_cb |
| 4991 | | self.sim_handler.update_tuggables(all_changeds) |
| 4992 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4993 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 4994 | | update_tuggables |
| 4995 | | force.update_targets(tuggables.sim_indices, |
| 4996 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 4997 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 4998 | | update_targets |
| 4999 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5000 | | indices, params) |
| 5001 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5002 | | range |
| 5003 | | |
| 5004 | | Error processing trigger "changes": |
| 5005 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5006 | | range |
| 5007 | | |
| 5008 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5009 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5010 | | update_targets |
| 5011 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5012 | | indices, params) |
| 5013 | | |
| 5014 | | See log for complete Python traceback. |
| 5015 | | |
| 5016 | | Traceback (most recent call last): |
| 5017 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5018 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5019 | | return self._func(self._name, data) |
| 5020 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5021 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5022 | | _tug_changed_cb |
| 5023 | | self.sim_handler.update_tuggables(all_changeds) |
| 5024 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5025 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5026 | | update_tuggables |
| 5027 | | force.update_targets(tuggables.sim_indices, |
| 5028 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5029 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5030 | | update_targets |
| 5031 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5032 | | indices, params) |
| 5033 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5034 | | range |
| 5035 | | |
| 5036 | | Error processing trigger "changes": |
| 5037 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5038 | | range |
| 5039 | | |
| 5040 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5041 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5042 | | update_targets |
| 5043 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5044 | | indices, params) |
| 5045 | | |
| 5046 | | See log for complete Python traceback. |
| 5047 | | |
| 5048 | | Traceback (most recent call last): |
| 5049 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5050 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5051 | | return self._func(self._name, data) |
| 5052 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5053 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5054 | | _tug_changed_cb |
| 5055 | | self.sim_handler.update_tuggables(all_changeds) |
| 5056 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5057 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5058 | | update_tuggables |
| 5059 | | force.update_targets(tuggables.sim_indices, |
| 5060 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5061 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5062 | | update_targets |
| 5063 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5064 | | indices, params) |
| 5065 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5066 | | range |
| 5067 | | |
| 5068 | | Error processing trigger "changes": |
| 5069 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5070 | | range |
| 5071 | | |
| 5072 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5073 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5074 | | update_targets |
| 5075 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5076 | | indices, params) |
| 5077 | | |
| 5078 | | See log for complete Python traceback. |
| 5079 | | |
| 5080 | | Traceback (most recent call last): |
| 5081 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5082 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5083 | | return self._func(self._name, data) |
| 5084 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5085 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5086 | | _tug_changed_cb |
| 5087 | | self.sim_handler.update_tuggables(all_changeds) |
| 5088 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5089 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5090 | | update_tuggables |
| 5091 | | force.update_targets(tuggables.sim_indices, |
| 5092 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5093 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5094 | | update_targets |
| 5095 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5096 | | indices, params) |
| 5097 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5098 | | range |
| 5099 | | |
| 5100 | | Error processing trigger "changes": |
| 5101 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5102 | | range |
| 5103 | | |
| 5104 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5105 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5106 | | update_targets |
| 5107 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5108 | | indices, params) |
| 5109 | | |
| 5110 | | See log for complete Python traceback. |
| 5111 | | |
| 5112 | | Traceback (most recent call last): |
| 5113 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5114 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5115 | | return self._func(self._name, data) |
| 5116 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5117 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5118 | | _tug_changed_cb |
| 5119 | | self.sim_handler.update_tuggables(all_changeds) |
| 5120 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5121 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5122 | | update_tuggables |
| 5123 | | force.update_targets(tuggables.sim_indices, |
| 5124 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5125 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5126 | | update_targets |
| 5127 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5128 | | indices, params) |
| 5129 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5130 | | range |
| 5131 | | |
| 5132 | | Error processing trigger "changes": |
| 5133 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5134 | | range |
| 5135 | | |
| 5136 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5137 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5138 | | update_targets |
| 5139 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5140 | | indices, params) |
| 5141 | | |
| 5142 | | See log for complete Python traceback. |
| 5143 | | |
| 5144 | | Traceback (most recent call last): |
| 5145 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5146 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5147 | | return self._func(self._name, data) |
| 5148 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5149 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5150 | | _tug_changed_cb |
| 5151 | | self.sim_handler.update_tuggables(all_changeds) |
| 5152 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5153 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5154 | | update_tuggables |
| 5155 | | force.update_targets(tuggables.sim_indices, |
| 5156 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5157 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5158 | | update_targets |
| 5159 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5160 | | indices, params) |
| 5161 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5162 | | range |
| 5163 | | |
| 5164 | | Error processing trigger "changes": |
| 5165 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5166 | | range |
| 5167 | | |
| 5168 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5169 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5170 | | update_targets |
| 5171 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5172 | | indices, params) |
| 5173 | | |
| 5174 | | See log for complete Python traceback. |
| 5175 | | |
| 5176 | | Traceback (most recent call last): |
| 5177 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5178 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5179 | | return self._func(self._name, data) |
| 5180 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5181 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5182 | | _tug_changed_cb |
| 5183 | | self.sim_handler.update_tuggables(all_changeds) |
| 5184 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5185 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5186 | | update_tuggables |
| 5187 | | force.update_targets(tuggables.sim_indices, |
| 5188 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5189 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5190 | | update_targets |
| 5191 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5192 | | indices, params) |
| 5193 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5194 | | range |
| 5195 | | |
| 5196 | | Error processing trigger "changes": |
| 5197 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5198 | | range |
| 5199 | | |
| 5200 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5201 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5202 | | update_targets |
| 5203 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5204 | | indices, params) |
| 5205 | | |
| 5206 | | See log for complete Python traceback. |
| 5207 | | |
| 5208 | | Traceback (most recent call last): |
| 5209 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5210 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5211 | | return self._func(self._name, data) |
| 5212 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5213 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5214 | | _tug_changed_cb |
| 5215 | | self.sim_handler.update_tuggables(all_changeds) |
| 5216 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5217 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5218 | | update_tuggables |
| 5219 | | force.update_targets(tuggables.sim_indices, |
| 5220 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5221 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5222 | | update_targets |
| 5223 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5224 | | indices, params) |
| 5225 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5226 | | range |
| 5227 | | |
| 5228 | | Error processing trigger "changes": |
| 5229 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5230 | | range |
| 5231 | | |
| 5232 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5233 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5234 | | update_targets |
| 5235 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5236 | | indices, params) |
| 5237 | | |
| 5238 | | See log for complete Python traceback. |
| 5239 | | |
| 5240 | | Traceback (most recent call last): |
| 5241 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5242 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5243 | | return self._func(self._name, data) |
| 5244 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5245 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5246 | | _tug_changed_cb |
| 5247 | | self.sim_handler.update_tuggables(all_changeds) |
| 5248 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5249 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5250 | | update_tuggables |
| 5251 | | force.update_targets(tuggables.sim_indices, |
| 5252 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5253 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5254 | | update_targets |
| 5255 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5256 | | indices, params) |
| 5257 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5258 | | range |
| 5259 | | |
| 5260 | | Error processing trigger "changes": |
| 5261 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5262 | | range |
| 5263 | | |
| 5264 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5265 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5266 | | update_targets |
| 5267 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5268 | | indices, params) |
| 5269 | | |
| 5270 | | See log for complete Python traceback. |
| 5271 | | |
| 5272 | | Traceback (most recent call last): |
| 5273 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5274 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5275 | | return self._func(self._name, data) |
| 5276 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5277 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5278 | | _tug_changed_cb |
| 5279 | | self.sim_handler.update_tuggables(all_changeds) |
| 5280 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5281 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5282 | | update_tuggables |
| 5283 | | force.update_targets(tuggables.sim_indices, |
| 5284 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5285 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5286 | | update_targets |
| 5287 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5288 | | indices, params) |
| 5289 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5290 | | range |
| 5291 | | |
| 5292 | | Error processing trigger "changes": |
| 5293 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5294 | | range |
| 5295 | | |
| 5296 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5297 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5298 | | update_targets |
| 5299 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5300 | | indices, params) |
| 5301 | | |
| 5302 | | See log for complete Python traceback. |
| 5303 | | |
| 5304 | | Traceback (most recent call last): |
| 5305 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5306 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5307 | | return self._func(self._name, data) |
| 5308 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5309 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5310 | | _tug_changed_cb |
| 5311 | | self.sim_handler.update_tuggables(all_changeds) |
| 5312 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5313 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5314 | | update_tuggables |
| 5315 | | force.update_targets(tuggables.sim_indices, |
| 5316 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5317 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5318 | | update_targets |
| 5319 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5320 | | indices, params) |
| 5321 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5322 | | range |
| 5323 | | |
| 5324 | | Error processing trigger "changes": |
| 5325 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5326 | | range |
| 5327 | | |
| 5328 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5329 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5330 | | update_targets |
| 5331 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5332 | | indices, params) |
| 5333 | | |
| 5334 | | See log for complete Python traceback. |
| 5335 | | |
| 5336 | | Traceback (most recent call last): |
| 5337 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5338 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5339 | | return self._func(self._name, data) |
| 5340 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5341 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5342 | | _tug_changed_cb |
| 5343 | | self.sim_handler.update_tuggables(all_changeds) |
| 5344 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5345 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5346 | | update_tuggables |
| 5347 | | force.update_targets(tuggables.sim_indices, |
| 5348 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5349 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5350 | | update_targets |
| 5351 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5352 | | indices, params) |
| 5353 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5354 | | range |
| 5355 | | |
| 5356 | | Error processing trigger "changes": |
| 5357 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5358 | | range |
| 5359 | | |
| 5360 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5361 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5362 | | update_targets |
| 5363 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5364 | | indices, params) |
| 5365 | | |
| 5366 | | See log for complete Python traceback. |
| 5367 | | |
| 5368 | | Traceback (most recent call last): |
| 5369 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5370 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5371 | | return self._func(self._name, data) |
| 5372 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5373 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5374 | | _tug_changed_cb |
| 5375 | | self.sim_handler.update_tuggables(all_changeds) |
| 5376 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5377 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5378 | | update_tuggables |
| 5379 | | force.update_targets(tuggables.sim_indices, |
| 5380 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5381 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5382 | | update_targets |
| 5383 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5384 | | indices, params) |
| 5385 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5386 | | range |
| 5387 | | |
| 5388 | | Error processing trigger "changes": |
| 5389 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5390 | | range |
| 5391 | | |
| 5392 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5393 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5394 | | update_targets |
| 5395 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5396 | | indices, params) |
| 5397 | | |
| 5398 | | See log for complete Python traceback. |
| 5399 | | |
| 5400 | | Traceback (most recent call last): |
| 5401 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5402 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5403 | | return self._func(self._name, data) |
| 5404 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5405 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5406 | | _tug_changed_cb |
| 5407 | | self.sim_handler.update_tuggables(all_changeds) |
| 5408 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5409 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5410 | | update_tuggables |
| 5411 | | force.update_targets(tuggables.sim_indices, |
| 5412 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5413 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5414 | | update_targets |
| 5415 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5416 | | indices, params) |
| 5417 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5418 | | range |
| 5419 | | |
| 5420 | | Error processing trigger "changes": |
| 5421 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5422 | | range |
| 5423 | | |
| 5424 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5425 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5426 | | update_targets |
| 5427 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5428 | | indices, params) |
| 5429 | | |
| 5430 | | See log for complete Python traceback. |
| 5431 | | |
| 5432 | | Traceback (most recent call last): |
| 5433 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5434 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5435 | | return self._func(self._name, data) |
| 5436 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5437 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5438 | | _tug_changed_cb |
| 5439 | | self.sim_handler.update_tuggables(all_changeds) |
| 5440 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5441 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5442 | | update_tuggables |
| 5443 | | force.update_targets(tuggables.sim_indices, |
| 5444 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5445 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5446 | | update_targets |
| 5447 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5448 | | indices, params) |
| 5449 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5450 | | range |
| 5451 | | |
| 5452 | | Error processing trigger "changes": |
| 5453 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5454 | | range |
| 5455 | | |
| 5456 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5457 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5458 | | update_targets |
| 5459 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5460 | | indices, params) |
| 5461 | | |
| 5462 | | See log for complete Python traceback. |
| 5463 | | |
| 5464 | | Traceback (most recent call last): |
| 5465 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5466 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5467 | | return self._func(self._name, data) |
| 5468 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5469 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5470 | | _tug_changed_cb |
| 5471 | | self.sim_handler.update_tuggables(all_changeds) |
| 5472 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5473 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5474 | | update_tuggables |
| 5475 | | force.update_targets(tuggables.sim_indices, |
| 5476 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5477 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5478 | | update_targets |
| 5479 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5480 | | indices, params) |
| 5481 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5482 | | range |
| 5483 | | |
| 5484 | | Error processing trigger "changes": |
| 5485 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5486 | | range |
| 5487 | | |
| 5488 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5489 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5490 | | update_targets |
| 5491 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5492 | | indices, params) |
| 5493 | | |
| 5494 | | See log for complete Python traceback. |
| 5495 | | |
| 5496 | | Traceback (most recent call last): |
| 5497 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5498 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5499 | | return self._func(self._name, data) |
| 5500 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5501 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5502 | | _tug_changed_cb |
| 5503 | | self.sim_handler.update_tuggables(all_changeds) |
| 5504 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5505 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5506 | | update_tuggables |
| 5507 | | force.update_targets(tuggables.sim_indices, |
| 5508 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5509 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5510 | | update_targets |
| 5511 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5512 | | indices, params) |
| 5513 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5514 | | range |
| 5515 | | |
| 5516 | | Error processing trigger "changes": |
| 5517 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5518 | | range |
| 5519 | | |
| 5520 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5521 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5522 | | update_targets |
| 5523 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5524 | | indices, params) |
| 5525 | | |
| 5526 | | See log for complete Python traceback. |
| 5527 | | |
| 5528 | | Traceback (most recent call last): |
| 5529 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5530 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5531 | | return self._func(self._name, data) |
| 5532 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5533 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5534 | | _tug_changed_cb |
| 5535 | | self.sim_handler.update_tuggables(all_changeds) |
| 5536 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5537 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5538 | | update_tuggables |
| 5539 | | force.update_targets(tuggables.sim_indices, |
| 5540 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5541 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5542 | | update_targets |
| 5543 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5544 | | indices, params) |
| 5545 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5546 | | range |
| 5547 | | |
| 5548 | | Error processing trigger "changes": |
| 5549 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5550 | | range |
| 5551 | | |
| 5552 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5553 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5554 | | update_targets |
| 5555 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5556 | | indices, params) |
| 5557 | | |
| 5558 | | See log for complete Python traceback. |
| 5559 | | |
| 5560 | | Traceback (most recent call last): |
| 5561 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5562 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5563 | | return self._func(self._name, data) |
| 5564 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5565 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5566 | | _tug_changed_cb |
| 5567 | | self.sim_handler.update_tuggables(all_changeds) |
| 5568 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5569 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5570 | | update_tuggables |
| 5571 | | force.update_targets(tuggables.sim_indices, |
| 5572 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5573 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5574 | | update_targets |
| 5575 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5576 | | indices, params) |
| 5577 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5578 | | range |
| 5579 | | |
| 5580 | | Error processing trigger "changes": |
| 5581 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5582 | | range |
| 5583 | | |
| 5584 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5585 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5586 | | update_targets |
| 5587 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5588 | | indices, params) |
| 5589 | | |
| 5590 | | See log for complete Python traceback. |
| 5591 | | |
| 5592 | | Traceback (most recent call last): |
| 5593 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5594 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5595 | | return self._func(self._name, data) |
| 5596 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5597 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5598 | | _tug_changed_cb |
| 5599 | | self.sim_handler.update_tuggables(all_changeds) |
| 5600 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5601 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5602 | | update_tuggables |
| 5603 | | force.update_targets(tuggables.sim_indices, |
| 5604 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5605 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5606 | | update_targets |
| 5607 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5608 | | indices, params) |
| 5609 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5610 | | range |
| 5611 | | |
| 5612 | | Error processing trigger "changes": |
| 5613 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5614 | | range |
| 5615 | | |
| 5616 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5617 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5618 | | update_targets |
| 5619 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5620 | | indices, params) |
| 5621 | | |
| 5622 | | See log for complete Python traceback. |
| 5623 | | |
| 5624 | | Traceback (most recent call last): |
| 5625 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5626 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5627 | | return self._func(self._name, data) |
| 5628 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5629 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5630 | | _tug_changed_cb |
| 5631 | | self.sim_handler.update_tuggables(all_changeds) |
| 5632 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5633 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5634 | | update_tuggables |
| 5635 | | force.update_targets(tuggables.sim_indices, |
| 5636 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5637 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5638 | | update_targets |
| 5639 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5640 | | indices, params) |
| 5641 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5642 | | range |
| 5643 | | |
| 5644 | | Error processing trigger "changes": |
| 5645 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5646 | | range |
| 5647 | | |
| 5648 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5649 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5650 | | update_targets |
| 5651 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5652 | | indices, params) |
| 5653 | | |
| 5654 | | See log for complete Python traceback. |
| 5655 | | |
| 5656 | | Traceback (most recent call last): |
| 5657 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5658 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5659 | | return self._func(self._name, data) |
| 5660 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5661 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5662 | | _tug_changed_cb |
| 5663 | | self.sim_handler.update_tuggables(all_changeds) |
| 5664 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5665 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5666 | | update_tuggables |
| 5667 | | force.update_targets(tuggables.sim_indices, |
| 5668 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5669 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5670 | | update_targets |
| 5671 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5672 | | indices, params) |
| 5673 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5674 | | range |
| 5675 | | |
| 5676 | | Error processing trigger "changes": |
| 5677 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5678 | | range |
| 5679 | | |
| 5680 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5681 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5682 | | update_targets |
| 5683 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5684 | | indices, params) |
| 5685 | | |
| 5686 | | See log for complete Python traceback. |
| 5687 | | |
| 5688 | | Traceback (most recent call last): |
| 5689 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5690 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5691 | | return self._func(self._name, data) |
| 5692 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5693 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5694 | | _tug_changed_cb |
| 5695 | | self.sim_handler.update_tuggables(all_changeds) |
| 5696 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5697 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5698 | | update_tuggables |
| 5699 | | force.update_targets(tuggables.sim_indices, |
| 5700 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5701 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5702 | | update_targets |
| 5703 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5704 | | indices, params) |
| 5705 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5706 | | range |
| 5707 | | |
| 5708 | | Error processing trigger "changes": |
| 5709 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5710 | | range |
| 5711 | | |
| 5712 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5713 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5714 | | update_targets |
| 5715 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5716 | | indices, params) |
| 5717 | | |
| 5718 | | See log for complete Python traceback. |
| 5719 | | |
| 5720 | | Traceback (most recent call last): |
| 5721 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5722 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5723 | | return self._func(self._name, data) |
| 5724 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5725 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5726 | | _tug_changed_cb |
| 5727 | | self.sim_handler.update_tuggables(all_changeds) |
| 5728 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5729 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5730 | | update_tuggables |
| 5731 | | force.update_targets(tuggables.sim_indices, |
| 5732 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5733 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5734 | | update_targets |
| 5735 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5736 | | indices, params) |
| 5737 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5738 | | range |
| 5739 | | |
| 5740 | | Error processing trigger "changes": |
| 5741 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5742 | | range |
| 5743 | | |
| 5744 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5745 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5746 | | update_targets |
| 5747 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5748 | | indices, params) |
| 5749 | | |
| 5750 | | See log for complete Python traceback. |
| 5751 | | |
| 5752 | | Traceback (most recent call last): |
| 5753 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5754 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5755 | | return self._func(self._name, data) |
| 5756 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5757 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5758 | | _tug_changed_cb |
| 5759 | | self.sim_handler.update_tuggables(all_changeds) |
| 5760 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5761 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5762 | | update_tuggables |
| 5763 | | force.update_targets(tuggables.sim_indices, |
| 5764 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5765 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5766 | | update_targets |
| 5767 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5768 | | indices, params) |
| 5769 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5770 | | range |
| 5771 | | |
| 5772 | | Error processing trigger "changes": |
| 5773 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5774 | | range |
| 5775 | | |
| 5776 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5777 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5778 | | update_targets |
| 5779 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5780 | | indices, params) |
| 5781 | | |
| 5782 | | See log for complete Python traceback. |
| 5783 | | |
| 5784 | | Traceback (most recent call last): |
| 5785 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5786 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5787 | | return self._func(self._name, data) |
| 5788 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5789 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5790 | | _tug_changed_cb |
| 5791 | | self.sim_handler.update_tuggables(all_changeds) |
| 5792 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5793 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5794 | | update_tuggables |
| 5795 | | force.update_targets(tuggables.sim_indices, |
| 5796 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5797 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5798 | | update_targets |
| 5799 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5800 | | indices, params) |
| 5801 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5802 | | range |
| 5803 | | |
| 5804 | | Error processing trigger "changes": |
| 5805 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5806 | | range |
| 5807 | | |
| 5808 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5809 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5810 | | update_targets |
| 5811 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5812 | | indices, params) |
| 5813 | | |
| 5814 | | See log for complete Python traceback. |
| 5815 | | |
| 5816 | | Traceback (most recent call last): |
| 5817 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5818 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5819 | | return self._func(self._name, data) |
| 5820 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5821 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5822 | | _tug_changed_cb |
| 5823 | | self.sim_handler.update_tuggables(all_changeds) |
| 5824 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5825 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5826 | | update_tuggables |
| 5827 | | force.update_targets(tuggables.sim_indices, |
| 5828 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5829 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5830 | | update_targets |
| 5831 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5832 | | indices, params) |
| 5833 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5834 | | range |
| 5835 | | |
| 5836 | | Error processing trigger "changes": |
| 5837 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5838 | | range |
| 5839 | | |
| 5840 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5841 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5842 | | update_targets |
| 5843 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5844 | | indices, params) |
| 5845 | | |
| 5846 | | See log for complete Python traceback. |
| 5847 | | |
| 5848 | | Traceback (most recent call last): |
| 5849 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5850 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5851 | | return self._func(self._name, data) |
| 5852 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5853 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5854 | | _tug_changed_cb |
| 5855 | | self.sim_handler.update_tuggables(all_changeds) |
| 5856 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5857 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5858 | | update_tuggables |
| 5859 | | force.update_targets(tuggables.sim_indices, |
| 5860 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5861 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5862 | | update_targets |
| 5863 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5864 | | indices, params) |
| 5865 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5866 | | range |
| 5867 | | |
| 5868 | | Error processing trigger "changes": |
| 5869 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5870 | | range |
| 5871 | | |
| 5872 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5873 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5874 | | update_targets |
| 5875 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5876 | | indices, params) |
| 5877 | | |
| 5878 | | See log for complete Python traceback. |
| 5879 | | |
| 5880 | | Traceback (most recent call last): |
| 5881 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5882 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5883 | | return self._func(self._name, data) |
| 5884 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5885 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5886 | | _tug_changed_cb |
| 5887 | | self.sim_handler.update_tuggables(all_changeds) |
| 5888 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5889 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5890 | | update_tuggables |
| 5891 | | force.update_targets(tuggables.sim_indices, |
| 5892 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5893 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5894 | | update_targets |
| 5895 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5896 | | indices, params) |
| 5897 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5898 | | range |
| 5899 | | |
| 5900 | | Error processing trigger "changes": |
| 5901 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5902 | | range |
| 5903 | | |
| 5904 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5905 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5906 | | update_targets |
| 5907 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5908 | | indices, params) |
| 5909 | | |
| 5910 | | See log for complete Python traceback. |
| 5911 | | |
| 5912 | | Traceback (most recent call last): |
| 5913 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5914 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5915 | | return self._func(self._name, data) |
| 5916 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5917 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5918 | | _tug_changed_cb |
| 5919 | | self.sim_handler.update_tuggables(all_changeds) |
| 5920 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5921 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5922 | | update_tuggables |
| 5923 | | force.update_targets(tuggables.sim_indices, |
| 5924 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5925 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5926 | | update_targets |
| 5927 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5928 | | indices, params) |
| 5929 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5930 | | range |
| 5931 | | |
| 5932 | | Error processing trigger "changes": |
| 5933 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5934 | | range |
| 5935 | | |
| 5936 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5937 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5938 | | update_targets |
| 5939 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5940 | | indices, params) |
| 5941 | | |
| 5942 | | See log for complete Python traceback. |
| 5943 | | |
| 5944 | | Traceback (most recent call last): |
| 5945 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5946 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5947 | | return self._func(self._name, data) |
| 5948 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5949 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5950 | | _tug_changed_cb |
| 5951 | | self.sim_handler.update_tuggables(all_changeds) |
| 5952 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5953 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5954 | | update_tuggables |
| 5955 | | force.update_targets(tuggables.sim_indices, |
| 5956 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5957 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5958 | | update_targets |
| 5959 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5960 | | indices, params) |
| 5961 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5962 | | range |
| 5963 | | |
| 5964 | | Error processing trigger "changes": |
| 5965 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5966 | | range |
| 5967 | | |
| 5968 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5969 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5970 | | update_targets |
| 5971 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5972 | | indices, params) |
| 5973 | | |
| 5974 | | See log for complete Python traceback. |
| 5975 | | |
| 5976 | | Traceback (most recent call last): |
| 5977 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 5978 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 5979 | | return self._func(self._name, data) |
| 5980 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5981 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 5982 | | _tug_changed_cb |
| 5983 | | self.sim_handler.update_tuggables(all_changeds) |
| 5984 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5985 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 5986 | | update_tuggables |
| 5987 | | force.update_targets(tuggables.sim_indices, |
| 5988 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 5989 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 5990 | | update_targets |
| 5991 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 5992 | | indices, params) |
| 5993 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5994 | | range |
| 5995 | | |
| 5996 | | Error processing trigger "changes": |
| 5997 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 5998 | | range |
| 5999 | | |
| 6000 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6001 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6002 | | update_targets |
| 6003 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6004 | | indices, params) |
| 6005 | | |
| 6006 | | See log for complete Python traceback. |
| 6007 | | |
| 6008 | | Traceback (most recent call last): |
| 6009 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6010 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6011 | | return self._func(self._name, data) |
| 6012 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6013 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6014 | | _tug_changed_cb |
| 6015 | | self.sim_handler.update_tuggables(all_changeds) |
| 6016 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6017 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6018 | | update_tuggables |
| 6019 | | force.update_targets(tuggables.sim_indices, |
| 6020 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6021 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6022 | | update_targets |
| 6023 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6024 | | indices, params) |
| 6025 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6026 | | range |
| 6027 | | |
| 6028 | | Error processing trigger "changes": |
| 6029 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6030 | | range |
| 6031 | | |
| 6032 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6033 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6034 | | update_targets |
| 6035 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6036 | | indices, params) |
| 6037 | | |
| 6038 | | See log for complete Python traceback. |
| 6039 | | |
| 6040 | | Traceback (most recent call last): |
| 6041 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6042 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6043 | | return self._func(self._name, data) |
| 6044 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6045 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6046 | | _tug_changed_cb |
| 6047 | | self.sim_handler.update_tuggables(all_changeds) |
| 6048 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6049 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6050 | | update_tuggables |
| 6051 | | force.update_targets(tuggables.sim_indices, |
| 6052 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6053 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6054 | | update_targets |
| 6055 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6056 | | indices, params) |
| 6057 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6058 | | range |
| 6059 | | |
| 6060 | | Error processing trigger "changes": |
| 6061 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6062 | | range |
| 6063 | | |
| 6064 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6065 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6066 | | update_targets |
| 6067 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6068 | | indices, params) |
| 6069 | | |
| 6070 | | See log for complete Python traceback. |
| 6071 | | |
| 6072 | | Traceback (most recent call last): |
| 6073 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6074 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6075 | | return self._func(self._name, data) |
| 6076 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6077 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6078 | | _tug_changed_cb |
| 6079 | | self.sim_handler.update_tuggables(all_changeds) |
| 6080 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6081 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6082 | | update_tuggables |
| 6083 | | force.update_targets(tuggables.sim_indices, |
| 6084 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6085 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6086 | | update_targets |
| 6087 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6088 | | indices, params) |
| 6089 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6090 | | range |
| 6091 | | |
| 6092 | | Error processing trigger "changes": |
| 6093 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6094 | | range |
| 6095 | | |
| 6096 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6097 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6098 | | update_targets |
| 6099 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6100 | | indices, params) |
| 6101 | | |
| 6102 | | See log for complete Python traceback. |
| 6103 | | |
| 6104 | | Traceback (most recent call last): |
| 6105 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6106 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6107 | | return self._func(self._name, data) |
| 6108 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6109 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6110 | | _tug_changed_cb |
| 6111 | | self.sim_handler.update_tuggables(all_changeds) |
| 6112 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6113 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6114 | | update_tuggables |
| 6115 | | force.update_targets(tuggables.sim_indices, |
| 6116 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6117 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6118 | | update_targets |
| 6119 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6120 | | indices, params) |
| 6121 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6122 | | range |
| 6123 | | |
| 6124 | | Error processing trigger "changes": |
| 6125 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6126 | | range |
| 6127 | | |
| 6128 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6129 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6130 | | update_targets |
| 6131 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6132 | | indices, params) |
| 6133 | | |
| 6134 | | See log for complete Python traceback. |
| 6135 | | |
| 6136 | | Traceback (most recent call last): |
| 6137 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6138 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6139 | | return self._func(self._name, data) |
| 6140 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6141 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6142 | | _tug_changed_cb |
| 6143 | | self.sim_handler.update_tuggables(all_changeds) |
| 6144 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6145 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6146 | | update_tuggables |
| 6147 | | force.update_targets(tuggables.sim_indices, |
| 6148 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6149 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6150 | | update_targets |
| 6151 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6152 | | indices, params) |
| 6153 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6154 | | range |
| 6155 | | |
| 6156 | | Error processing trigger "changes": |
| 6157 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6158 | | range |
| 6159 | | |
| 6160 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6161 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6162 | | update_targets |
| 6163 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6164 | | indices, params) |
| 6165 | | |
| 6166 | | See log for complete Python traceback. |
| 6167 | | |
| 6168 | | Traceback (most recent call last): |
| 6169 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6170 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6171 | | return self._func(self._name, data) |
| 6172 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6173 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6174 | | _tug_changed_cb |
| 6175 | | self.sim_handler.update_tuggables(all_changeds) |
| 6176 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6177 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6178 | | update_tuggables |
| 6179 | | force.update_targets(tuggables.sim_indices, |
| 6180 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6181 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6182 | | update_targets |
| 6183 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6184 | | indices, params) |
| 6185 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6186 | | range |
| 6187 | | |
| 6188 | | Error processing trigger "changes": |
| 6189 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6190 | | range |
| 6191 | | |
| 6192 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6193 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6194 | | update_targets |
| 6195 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6196 | | indices, params) |
| 6197 | | |
| 6198 | | See log for complete Python traceback. |
| 6199 | | |
| 6200 | | Traceback (most recent call last): |
| 6201 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6202 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6203 | | return self._func(self._name, data) |
| 6204 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6205 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6206 | | _tug_changed_cb |
| 6207 | | self.sim_handler.update_tuggables(all_changeds) |
| 6208 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6209 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6210 | | update_tuggables |
| 6211 | | force.update_targets(tuggables.sim_indices, |
| 6212 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6213 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6214 | | update_targets |
| 6215 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6216 | | indices, params) |
| 6217 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6218 | | range |
| 6219 | | |
| 6220 | | Error processing trigger "changes": |
| 6221 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6222 | | range |
| 6223 | | |
| 6224 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6225 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6226 | | update_targets |
| 6227 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6228 | | indices, params) |
| 6229 | | |
| 6230 | | See log for complete Python traceback. |
| 6231 | | |
| 6232 | | Traceback (most recent call last): |
| 6233 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6234 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6235 | | return self._func(self._name, data) |
| 6236 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6237 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6238 | | _tug_changed_cb |
| 6239 | | self.sim_handler.update_tuggables(all_changeds) |
| 6240 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6241 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6242 | | update_tuggables |
| 6243 | | force.update_targets(tuggables.sim_indices, |
| 6244 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6245 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6246 | | update_targets |
| 6247 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6248 | | indices, params) |
| 6249 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6250 | | range |
| 6251 | | |
| 6252 | | Error processing trigger "changes": |
| 6253 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6254 | | range |
| 6255 | | |
| 6256 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6257 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6258 | | update_targets |
| 6259 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6260 | | indices, params) |
| 6261 | | |
| 6262 | | See log for complete Python traceback. |
| 6263 | | |
| 6264 | | Traceback (most recent call last): |
| 6265 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6266 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6267 | | return self._func(self._name, data) |
| 6268 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6269 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6270 | | _tug_changed_cb |
| 6271 | | self.sim_handler.update_tuggables(all_changeds) |
| 6272 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6273 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6274 | | update_tuggables |
| 6275 | | force.update_targets(tuggables.sim_indices, |
| 6276 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6277 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6278 | | update_targets |
| 6279 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6280 | | indices, params) |
| 6281 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6282 | | range |
| 6283 | | |
| 6284 | | Error processing trigger "changes": |
| 6285 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6286 | | range |
| 6287 | | |
| 6288 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6289 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6290 | | update_targets |
| 6291 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6292 | | indices, params) |
| 6293 | | |
| 6294 | | See log for complete Python traceback. |
| 6295 | | |
| 6296 | | Traceback (most recent call last): |
| 6297 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6298 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6299 | | return self._func(self._name, data) |
| 6300 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6301 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6302 | | _tug_changed_cb |
| 6303 | | self.sim_handler.update_tuggables(all_changeds) |
| 6304 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6305 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6306 | | update_tuggables |
| 6307 | | force.update_targets(tuggables.sim_indices, |
| 6308 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6309 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6310 | | update_targets |
| 6311 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6312 | | indices, params) |
| 6313 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6314 | | range |
| 6315 | | |
| 6316 | | Error processing trigger "changes": |
| 6317 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6318 | | range |
| 6319 | | |
| 6320 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6321 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6322 | | update_targets |
| 6323 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6324 | | indices, params) |
| 6325 | | |
| 6326 | | See log for complete Python traceback. |
| 6327 | | |
| 6328 | | Traceback (most recent call last): |
| 6329 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6330 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6331 | | return self._func(self._name, data) |
| 6332 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6333 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6334 | | _tug_changed_cb |
| 6335 | | self.sim_handler.update_tuggables(all_changeds) |
| 6336 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6337 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6338 | | update_tuggables |
| 6339 | | force.update_targets(tuggables.sim_indices, |
| 6340 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6341 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6342 | | update_targets |
| 6343 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6344 | | indices, params) |
| 6345 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6346 | | range |
| 6347 | | |
| 6348 | | Error processing trigger "changes": |
| 6349 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6350 | | range |
| 6351 | | |
| 6352 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6353 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6354 | | update_targets |
| 6355 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6356 | | indices, params) |
| 6357 | | |
| 6358 | | See log for complete Python traceback. |
| 6359 | | |
| 6360 | | Traceback (most recent call last): |
| 6361 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6362 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6363 | | return self._func(self._name, data) |
| 6364 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6365 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6366 | | _tug_changed_cb |
| 6367 | | self.sim_handler.update_tuggables(all_changeds) |
| 6368 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6369 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6370 | | update_tuggables |
| 6371 | | force.update_targets(tuggables.sim_indices, |
| 6372 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6373 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6374 | | update_targets |
| 6375 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6376 | | indices, params) |
| 6377 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6378 | | range |
| 6379 | | |
| 6380 | | Error processing trigger "changes": |
| 6381 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6382 | | range |
| 6383 | | |
| 6384 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6385 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6386 | | update_targets |
| 6387 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6388 | | indices, params) |
| 6389 | | |
| 6390 | | See log for complete Python traceback. |
| 6391 | | |
| 6392 | | Traceback (most recent call last): |
| 6393 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6394 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6395 | | return self._func(self._name, data) |
| 6396 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6397 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6398 | | _tug_changed_cb |
| 6399 | | self.sim_handler.update_tuggables(all_changeds) |
| 6400 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6401 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6402 | | update_tuggables |
| 6403 | | force.update_targets(tuggables.sim_indices, |
| 6404 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6405 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6406 | | update_targets |
| 6407 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6408 | | indices, params) |
| 6409 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6410 | | range |
| 6411 | | |
| 6412 | | Error processing trigger "changes": |
| 6413 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6414 | | range |
| 6415 | | |
| 6416 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6417 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6418 | | update_targets |
| 6419 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6420 | | indices, params) |
| 6421 | | |
| 6422 | | See log for complete Python traceback. |
| 6423 | | |
| 6424 | | Traceback (most recent call last): |
| 6425 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6426 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6427 | | return self._func(self._name, data) |
| 6428 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6429 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6430 | | _tug_changed_cb |
| 6431 | | self.sim_handler.update_tuggables(all_changeds) |
| 6432 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6433 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6434 | | update_tuggables |
| 6435 | | force.update_targets(tuggables.sim_indices, |
| 6436 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6437 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6438 | | update_targets |
| 6439 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6440 | | indices, params) |
| 6441 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6442 | | range |
| 6443 | | |
| 6444 | | Error processing trigger "changes": |
| 6445 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6446 | | range |
| 6447 | | |
| 6448 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6449 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6450 | | update_targets |
| 6451 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6452 | | indices, params) |
| 6453 | | |
| 6454 | | See log for complete Python traceback. |
| 6455 | | |
| 6456 | | Traceback (most recent call last): |
| 6457 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6458 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6459 | | return self._func(self._name, data) |
| 6460 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6461 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6462 | | _tug_changed_cb |
| 6463 | | self.sim_handler.update_tuggables(all_changeds) |
| 6464 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6465 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6466 | | update_tuggables |
| 6467 | | force.update_targets(tuggables.sim_indices, |
| 6468 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6469 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6470 | | update_targets |
| 6471 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6472 | | indices, params) |
| 6473 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6474 | | range |
| 6475 | | |
| 6476 | | Error processing trigger "changes": |
| 6477 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6478 | | range |
| 6479 | | |
| 6480 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6481 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6482 | | update_targets |
| 6483 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6484 | | indices, params) |
| 6485 | | |
| 6486 | | See log for complete Python traceback. |
| 6487 | | |
| 6488 | | Traceback (most recent call last): |
| 6489 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6490 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6491 | | return self._func(self._name, data) |
| 6492 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6493 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6494 | | _tug_changed_cb |
| 6495 | | self.sim_handler.update_tuggables(all_changeds) |
| 6496 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6497 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6498 | | update_tuggables |
| 6499 | | force.update_targets(tuggables.sim_indices, |
| 6500 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6501 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6502 | | update_targets |
| 6503 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6504 | | indices, params) |
| 6505 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6506 | | range |
| 6507 | | |
| 6508 | | Error processing trigger "changes": |
| 6509 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6510 | | range |
| 6511 | | |
| 6512 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6513 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6514 | | update_targets |
| 6515 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6516 | | indices, params) |
| 6517 | | |
| 6518 | | See log for complete Python traceback. |
| 6519 | | |
| 6520 | | Traceback (most recent call last): |
| 6521 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6522 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6523 | | return self._func(self._name, data) |
| 6524 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6525 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6526 | | _tug_changed_cb |
| 6527 | | self.sim_handler.update_tuggables(all_changeds) |
| 6528 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6529 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6530 | | update_tuggables |
| 6531 | | force.update_targets(tuggables.sim_indices, |
| 6532 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6533 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6534 | | update_targets |
| 6535 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6536 | | indices, params) |
| 6537 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6538 | | range |
| 6539 | | |
| 6540 | | Error processing trigger "changes": |
| 6541 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6542 | | range |
| 6543 | | |
| 6544 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6545 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6546 | | update_targets |
| 6547 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6548 | | indices, params) |
| 6549 | | |
| 6550 | | See log for complete Python traceback. |
| 6551 | | |
| 6552 | | Traceback (most recent call last): |
| 6553 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6554 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6555 | | return self._func(self._name, data) |
| 6556 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6557 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6558 | | _tug_changed_cb |
| 6559 | | self.sim_handler.update_tuggables(all_changeds) |
| 6560 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6561 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6562 | | update_tuggables |
| 6563 | | force.update_targets(tuggables.sim_indices, |
| 6564 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6565 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6566 | | update_targets |
| 6567 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6568 | | indices, params) |
| 6569 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6570 | | range |
| 6571 | | |
| 6572 | | Error processing trigger "changes": |
| 6573 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6574 | | range |
| 6575 | | |
| 6576 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6577 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6578 | | update_targets |
| 6579 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6580 | | indices, params) |
| 6581 | | |
| 6582 | | See log for complete Python traceback. |
| 6583 | | |
| 6584 | | Traceback (most recent call last): |
| 6585 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6586 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6587 | | return self._func(self._name, data) |
| 6588 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6589 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6590 | | _tug_changed_cb |
| 6591 | | self.sim_handler.update_tuggables(all_changeds) |
| 6592 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6593 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6594 | | update_tuggables |
| 6595 | | force.update_targets(tuggables.sim_indices, |
| 6596 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6597 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6598 | | update_targets |
| 6599 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6600 | | indices, params) |
| 6601 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6602 | | range |
| 6603 | | |
| 6604 | | Error processing trigger "changes": |
| 6605 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6606 | | range |
| 6607 | | |
| 6608 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6609 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6610 | | update_targets |
| 6611 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6612 | | indices, params) |
| 6613 | | |
| 6614 | | See log for complete Python traceback. |
| 6615 | | |
| 6616 | | Traceback (most recent call last): |
| 6617 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6618 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6619 | | return self._func(self._name, data) |
| 6620 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6621 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6622 | | _tug_changed_cb |
| 6623 | | self.sim_handler.update_tuggables(all_changeds) |
| 6624 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6625 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6626 | | update_tuggables |
| 6627 | | force.update_targets(tuggables.sim_indices, |
| 6628 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6629 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6630 | | update_targets |
| 6631 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6632 | | indices, params) |
| 6633 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6634 | | range |
| 6635 | | |
| 6636 | | Error processing trigger "changes": |
| 6637 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6638 | | range |
| 6639 | | |
| 6640 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6641 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6642 | | update_targets |
| 6643 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6644 | | indices, params) |
| 6645 | | |
| 6646 | | See log for complete Python traceback. |
| 6647 | | |
| 6648 | | Traceback (most recent call last): |
| 6649 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6650 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6651 | | return self._func(self._name, data) |
| 6652 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6653 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6654 | | _tug_changed_cb |
| 6655 | | self.sim_handler.update_tuggables(all_changeds) |
| 6656 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6657 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6658 | | update_tuggables |
| 6659 | | force.update_targets(tuggables.sim_indices, |
| 6660 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6661 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6662 | | update_targets |
| 6663 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6664 | | indices, params) |
| 6665 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6666 | | range |
| 6667 | | |
| 6668 | | Error processing trigger "changes": |
| 6669 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6670 | | range |
| 6671 | | |
| 6672 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6673 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6674 | | update_targets |
| 6675 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6676 | | indices, params) |
| 6677 | | |
| 6678 | | See log for complete Python traceback. |
| 6679 | | |
| 6680 | | Traceback (most recent call last): |
| 6681 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6682 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6683 | | return self._func(self._name, data) |
| 6684 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6685 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6686 | | _tug_changed_cb |
| 6687 | | self.sim_handler.update_tuggables(all_changeds) |
| 6688 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6689 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6690 | | update_tuggables |
| 6691 | | force.update_targets(tuggables.sim_indices, |
| 6692 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6693 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6694 | | update_targets |
| 6695 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6696 | | indices, params) |
| 6697 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6698 | | range |
| 6699 | | |
| 6700 | | Error processing trigger "changes": |
| 6701 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6702 | | range |
| 6703 | | |
| 6704 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6705 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6706 | | update_targets |
| 6707 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6708 | | indices, params) |
| 6709 | | |
| 6710 | | See log for complete Python traceback. |
| 6711 | | |
| 6712 | | Traceback (most recent call last): |
| 6713 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6714 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6715 | | return self._func(self._name, data) |
| 6716 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6717 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6718 | | _tug_changed_cb |
| 6719 | | self.sim_handler.update_tuggables(all_changeds) |
| 6720 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6721 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6722 | | update_tuggables |
| 6723 | | force.update_targets(tuggables.sim_indices, |
| 6724 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6725 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6726 | | update_targets |
| 6727 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6728 | | indices, params) |
| 6729 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6730 | | range |
| 6731 | | |
| 6732 | | Error processing trigger "changes": |
| 6733 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6734 | | range |
| 6735 | | |
| 6736 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6737 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6738 | | update_targets |
| 6739 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6740 | | indices, params) |
| 6741 | | |
| 6742 | | See log for complete Python traceback. |
| 6743 | | |
| 6744 | | Traceback (most recent call last): |
| 6745 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6746 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6747 | | return self._func(self._name, data) |
| 6748 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6749 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6750 | | _tug_changed_cb |
| 6751 | | self.sim_handler.update_tuggables(all_changeds) |
| 6752 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6753 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6754 | | update_tuggables |
| 6755 | | force.update_targets(tuggables.sim_indices, |
| 6756 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6757 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6758 | | update_targets |
| 6759 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6760 | | indices, params) |
| 6761 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6762 | | range |
| 6763 | | |
| 6764 | | Error processing trigger "changes": |
| 6765 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6766 | | range |
| 6767 | | |
| 6768 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6769 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6770 | | update_targets |
| 6771 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6772 | | indices, params) |
| 6773 | | |
| 6774 | | See log for complete Python traceback. |
| 6775 | | |
| 6776 | | Traceback (most recent call last): |
| 6777 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6778 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6779 | | return self._func(self._name, data) |
| 6780 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6781 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6782 | | _tug_changed_cb |
| 6783 | | self.sim_handler.update_tuggables(all_changeds) |
| 6784 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6785 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6786 | | update_tuggables |
| 6787 | | force.update_targets(tuggables.sim_indices, |
| 6788 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6789 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6790 | | update_targets |
| 6791 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6792 | | indices, params) |
| 6793 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6794 | | range |
| 6795 | | |
| 6796 | | Error processing trigger "changes": |
| 6797 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6798 | | range |
| 6799 | | |
| 6800 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6801 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6802 | | update_targets |
| 6803 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6804 | | indices, params) |
| 6805 | | |
| 6806 | | See log for complete Python traceback. |
| 6807 | | |
| 6808 | | Traceback (most recent call last): |
| 6809 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6810 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6811 | | return self._func(self._name, data) |
| 6812 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6813 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6814 | | _tug_changed_cb |
| 6815 | | self.sim_handler.update_tuggables(all_changeds) |
| 6816 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6817 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6818 | | update_tuggables |
| 6819 | | force.update_targets(tuggables.sim_indices, |
| 6820 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6821 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6822 | | update_targets |
| 6823 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6824 | | indices, params) |
| 6825 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6826 | | range |
| 6827 | | |
| 6828 | | Error processing trigger "changes": |
| 6829 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6830 | | range |
| 6831 | | |
| 6832 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6833 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6834 | | update_targets |
| 6835 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6836 | | indices, params) |
| 6837 | | |
| 6838 | | See log for complete Python traceback. |
| 6839 | | |
| 6840 | | Traceback (most recent call last): |
| 6841 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6842 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6843 | | return self._func(self._name, data) |
| 6844 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6845 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6846 | | _tug_changed_cb |
| 6847 | | self.sim_handler.update_tuggables(all_changeds) |
| 6848 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6849 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6850 | | update_tuggables |
| 6851 | | force.update_targets(tuggables.sim_indices, |
| 6852 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6853 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6854 | | update_targets |
| 6855 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6856 | | indices, params) |
| 6857 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6858 | | range |
| 6859 | | |
| 6860 | | Error processing trigger "changes": |
| 6861 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6862 | | range |
| 6863 | | |
| 6864 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6865 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6866 | | update_targets |
| 6867 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6868 | | indices, params) |
| 6869 | | |
| 6870 | | See log for complete Python traceback. |
| 6871 | | |
| 6872 | | Traceback (most recent call last): |
| 6873 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6874 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6875 | | return self._func(self._name, data) |
| 6876 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6877 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6878 | | _tug_changed_cb |
| 6879 | | self.sim_handler.update_tuggables(all_changeds) |
| 6880 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6881 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6882 | | update_tuggables |
| 6883 | | force.update_targets(tuggables.sim_indices, |
| 6884 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6885 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6886 | | update_targets |
| 6887 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6888 | | indices, params) |
| 6889 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6890 | | range |
| 6891 | | |
| 6892 | | Error processing trigger "changes": |
| 6893 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6894 | | range |
| 6895 | | |
| 6896 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6897 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6898 | | update_targets |
| 6899 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6900 | | indices, params) |
| 6901 | | |
| 6902 | | See log for complete Python traceback. |
| 6903 | | |
| 6904 | | Traceback (most recent call last): |
| 6905 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6906 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6907 | | return self._func(self._name, data) |
| 6908 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6909 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6910 | | _tug_changed_cb |
| 6911 | | self.sim_handler.update_tuggables(all_changeds) |
| 6912 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6913 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6914 | | update_tuggables |
| 6915 | | force.update_targets(tuggables.sim_indices, |
| 6916 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6917 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6918 | | update_targets |
| 6919 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6920 | | indices, params) |
| 6921 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6922 | | range |
| 6923 | | |
| 6924 | | Error processing trigger "changes": |
| 6925 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6926 | | range |
| 6927 | | |
| 6928 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6929 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6930 | | update_targets |
| 6931 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6932 | | indices, params) |
| 6933 | | |
| 6934 | | See log for complete Python traceback. |
| 6935 | | |
| 6936 | | Traceback (most recent call last): |
| 6937 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6938 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6939 | | return self._func(self._name, data) |
| 6940 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6941 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6942 | | _tug_changed_cb |
| 6943 | | self.sim_handler.update_tuggables(all_changeds) |
| 6944 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6945 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6946 | | update_tuggables |
| 6947 | | force.update_targets(tuggables.sim_indices, |
| 6948 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6949 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6950 | | update_targets |
| 6951 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6952 | | indices, params) |
| 6953 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6954 | | range |
| 6955 | | |
| 6956 | | Error processing trigger "changes": |
| 6957 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6958 | | range |
| 6959 | | |
| 6960 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6961 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6962 | | update_targets |
| 6963 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6964 | | indices, params) |
| 6965 | | |
| 6966 | | See log for complete Python traceback. |
| 6967 | | |
| 6968 | | Traceback (most recent call last): |
| 6969 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 6970 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 6971 | | return self._func(self._name, data) |
| 6972 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6973 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 6974 | | _tug_changed_cb |
| 6975 | | self.sim_handler.update_tuggables(all_changeds) |
| 6976 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6977 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 6978 | | update_tuggables |
| 6979 | | force.update_targets(tuggables.sim_indices, |
| 6980 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6981 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6982 | | update_targets |
| 6983 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6984 | | indices, params) |
| 6985 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6986 | | range |
| 6987 | | |
| 6988 | | Error processing trigger "changes": |
| 6989 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 6990 | | range |
| 6991 | | |
| 6992 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 6993 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 6994 | | update_targets |
| 6995 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 6996 | | indices, params) |
| 6997 | | |
| 6998 | | See log for complete Python traceback. |
| 6999 | | |
| 7000 | | Traceback (most recent call last): |
| 7001 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7002 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7003 | | return self._func(self._name, data) |
| 7004 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7005 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7006 | | _tug_changed_cb |
| 7007 | | self.sim_handler.update_tuggables(all_changeds) |
| 7008 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7009 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7010 | | update_tuggables |
| 7011 | | force.update_targets(tuggables.sim_indices, |
| 7012 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7013 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7014 | | update_targets |
| 7015 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7016 | | indices, params) |
| 7017 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7018 | | range |
| 7019 | | |
| 7020 | | Error processing trigger "changes": |
| 7021 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7022 | | range |
| 7023 | | |
| 7024 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7025 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7026 | | update_targets |
| 7027 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7028 | | indices, params) |
| 7029 | | |
| 7030 | | See log for complete Python traceback. |
| 7031 | | |
| 7032 | | Traceback (most recent call last): |
| 7033 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7034 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7035 | | return self._func(self._name, data) |
| 7036 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7037 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7038 | | _tug_changed_cb |
| 7039 | | self.sim_handler.update_tuggables(all_changeds) |
| 7040 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7041 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7042 | | update_tuggables |
| 7043 | | force.update_targets(tuggables.sim_indices, |
| 7044 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7045 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7046 | | update_targets |
| 7047 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7048 | | indices, params) |
| 7049 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7050 | | range |
| 7051 | | |
| 7052 | | Error processing trigger "changes": |
| 7053 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7054 | | range |
| 7055 | | |
| 7056 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7057 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7058 | | update_targets |
| 7059 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7060 | | indices, params) |
| 7061 | | |
| 7062 | | See log for complete Python traceback. |
| 7063 | | |
| 7064 | | Traceback (most recent call last): |
| 7065 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7066 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7067 | | return self._func(self._name, data) |
| 7068 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7069 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7070 | | _tug_changed_cb |
| 7071 | | self.sim_handler.update_tuggables(all_changeds) |
| 7072 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7073 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7074 | | update_tuggables |
| 7075 | | force.update_targets(tuggables.sim_indices, |
| 7076 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7077 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7078 | | update_targets |
| 7079 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7080 | | indices, params) |
| 7081 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7082 | | range |
| 7083 | | |
| 7084 | | Error processing trigger "changes": |
| 7085 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7086 | | range |
| 7087 | | |
| 7088 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7089 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7090 | | update_targets |
| 7091 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7092 | | indices, params) |
| 7093 | | |
| 7094 | | See log for complete Python traceback. |
| 7095 | | |
| 7096 | | Traceback (most recent call last): |
| 7097 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7098 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7099 | | return self._func(self._name, data) |
| 7100 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7101 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7102 | | _tug_changed_cb |
| 7103 | | self.sim_handler.update_tuggables(all_changeds) |
| 7104 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7105 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7106 | | update_tuggables |
| 7107 | | force.update_targets(tuggables.sim_indices, |
| 7108 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7109 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7110 | | update_targets |
| 7111 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7112 | | indices, params) |
| 7113 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7114 | | range |
| 7115 | | |
| 7116 | | Error processing trigger "changes": |
| 7117 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7118 | | range |
| 7119 | | |
| 7120 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7121 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7122 | | update_targets |
| 7123 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7124 | | indices, params) |
| 7125 | | |
| 7126 | | See log for complete Python traceback. |
| 7127 | | |
| 7128 | | Traceback (most recent call last): |
| 7129 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7130 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7131 | | return self._func(self._name, data) |
| 7132 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7133 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7134 | | _tug_changed_cb |
| 7135 | | self.sim_handler.update_tuggables(all_changeds) |
| 7136 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7137 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7138 | | update_tuggables |
| 7139 | | force.update_targets(tuggables.sim_indices, |
| 7140 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7141 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7142 | | update_targets |
| 7143 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7144 | | indices, params) |
| 7145 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7146 | | range |
| 7147 | | |
| 7148 | | Error processing trigger "changes": |
| 7149 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7150 | | range |
| 7151 | | |
| 7152 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7153 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7154 | | update_targets |
| 7155 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7156 | | indices, params) |
| 7157 | | |
| 7158 | | See log for complete Python traceback. |
| 7159 | | |
| 7160 | | Traceback (most recent call last): |
| 7161 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7162 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7163 | | return self._func(self._name, data) |
| 7164 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7165 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7166 | | _tug_changed_cb |
| 7167 | | self.sim_handler.update_tuggables(all_changeds) |
| 7168 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7169 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7170 | | update_tuggables |
| 7171 | | force.update_targets(tuggables.sim_indices, |
| 7172 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7173 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7174 | | update_targets |
| 7175 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7176 | | indices, params) |
| 7177 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7178 | | range |
| 7179 | | |
| 7180 | | Error processing trigger "changes": |
| 7181 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7182 | | range |
| 7183 | | |
| 7184 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7185 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7186 | | update_targets |
| 7187 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7188 | | indices, params) |
| 7189 | | |
| 7190 | | See log for complete Python traceback. |
| 7191 | | |
| 7192 | | Traceback (most recent call last): |
| 7193 | | File "/usr/local/chimerax-1.6.1/lib/python3.9/site- |
| 7194 | | packages/chimerax/core/triggerset.py", line 138, in invoke |
| 7195 | | return self._func(self._name, data) |
| 7196 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7197 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 978, in |
| 7198 | | _tug_changed_cb |
| 7199 | | self.sim_handler.update_tuggables(all_changeds) |
| 7200 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7201 | | packages/chimerax/isolde/openmm/openmm_interface.py", line 2301, in |
| 7202 | | update_tuggables |
| 7203 | | force.update_targets(tuggables.sim_indices, |
| 7204 | | File "/usr/users/lukas/.local/share/ChimeraX/1.6/site- |
| 7205 | | packages/chimerax/isolde/openmm/custom_forces.py", line 1156, in |
| 7206 | | update_targets |
| 7207 | | _openmm_force_ext.customexternalforce_update_particle_parameters(int(self.this), |
| 7208 | | indices, params) |
| 7209 | | RuntimeError: Assertion failure at CustomExternalForce.cpp:104. Index out of |
| 7210 | | range |
| 7211 | | |
| | 3084 | |
| | 3085 | [*many* of these deleted to fit within ticket limits] |
| | 3086 | |