Changes between Initial Version and Version 3 of Ticket #1119


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Timestamp:
May 15, 2018, 2:05:17 PM (7 years ago)
Author:
Greg Couch
Comment:

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  • Ticket #1119

    • Property Component Core → Input/Output
    • Property Owner changed from Eric Pettersen to Greg Couch
    • Property Summary Erroneous bonding at RNA chain break in 5an9 → Misleading pseudobond at RNA chain break in mmCIF 5an9

  • Ticket #1119 – Description

    initial v3  
    1 If I open 5an9, residues N2700 and N2925 (the 3' and 5' sides of a chain break) are messed up. The pseudobond across the break goes from the O4 atom of N2700 to O3' of N2925, and O3' of N2925 is not bonded to N2926. I can force correct bonding by hacking a TER into the PDB between them.
     1Opening 5an9, residues N2700 and N2925 (the 3' and 5' sides of a chain break) are messed up. The pseudobond across the break goes from the O3' atom of N2700 to O3' of N2925.