Changes between Initial Version and Version 1 of Ticket #10377


Ignore:
Timestamp:
Dec 20, 2023, 11:54:07 AM (22 months ago)
Author:
Eric Pettersen
Comment:

Legend:

Unmodified
Added
Removed
Modified

  • Ticket #10377

    • Property Cc Elaine Meng added
    • Property Component Unassigned → Depiction
    • Property Owner set to Tom Goddard
    • Property Platform → all
    • Property Project → ChimeraX
    • Property Status new → assigned
    • Property Summary ChimeraX bug report submission → Color command syntax

  • Ticket #10377 – Description

    initial v1  
    37933793 
    37943794 
    3795 Duplicate atom serial number found: 4775 
    3796 Duplicate atom serial number found: 4776 
    3797 Duplicate atom serial number found: 4777 
    3798 Duplicate atom serial number found: 4778 
    3799 Duplicate atom serial number found: 4779 
    3800 451 messages similar to the above omitted 
    3801 Ignored bad PDB record found on line 107239 
    3802  
    3803  
    3804 Duplicate atom serial number found: 5231 
    3805 Duplicate atom serial number found: 5232 
    3806 Duplicate atom serial number found: 5233 
    3807 Duplicate atom serial number found: 5234 
    3808 Duplicate atom serial number found: 5235 
    3809 384 messages similar to the above omitted 
    3810 Ignored bad PDB record found on line 107630 
    3811  
    3812  
    3813 Duplicate atom serial number found: 5620 
    3814 Duplicate atom serial number found: 5621 
    3815 Duplicate atom serial number found: 5622 
    3816 Duplicate atom serial number found: 5623 
    3817 Duplicate atom serial number found: 5624 
    3818 364 messages similar to the above omitted 
    3819 Ignored bad PDB record found on line 108001 
    3820  
    3821  
    3822 Duplicate atom serial number found: 1 
    3823 Duplicate atom serial number found: 2 
    3824 Duplicate atom serial number found: 3 
    3825 Duplicate atom serial number found: 4 
    3826 Duplicate atom serial number found: 5 
    3827 229 messages similar to the above omitted 
    3828 Ignored bad PDB record found on line 108237 
    3829  
    3830  
    3831 Duplicate atom serial number found: 235 
    3832 Duplicate atom serial number found: 236 
    3833 Duplicate atom serial number found: 237 
    3834 Duplicate atom serial number found: 238 
    3835 Duplicate atom serial number found: 239 
    3836 2492 messages similar to the above omitted 
    3837 Ignored bad PDB record found on line 110736 
    3838  
    3839  
    3840 Duplicate atom serial number found: 2732 
    3841 Duplicate atom serial number found: 2733 
    3842 Duplicate atom serial number found: 2734 
    3843 Duplicate atom serial number found: 2735 
    3844 Duplicate atom serial number found: 2736 
    3845 2038 messages similar to the above omitted 
    3846 Ignored bad PDB record found on line 112781 
    3847  
    3848  
    3849 Duplicate atom serial number found: 4775 
    3850 Duplicate atom serial number found: 4776 
    3851 Duplicate atom serial number found: 4777 
    3852 Duplicate atom serial number found: 4778 
    3853 Duplicate atom serial number found: 4779 
    3854 451 messages similar to the above omitted 
    3855 Ignored bad PDB record found on line 113239 
    3856  
    3857  
    3858 Duplicate atom serial number found: 5231 
    3859 Duplicate atom serial number found: 5232 
    3860 Duplicate atom serial number found: 5233 
    3861 Duplicate atom serial number found: 5234 
    3862 Duplicate atom serial number found: 5235 
    3863 384 messages similar to the above omitted 
    3864 Ignored bad PDB record found on line 113630 
    3865  
    3866  
    3867 Duplicate atom serial number found: 5620 
    3868 Duplicate atom serial number found: 5621 
    3869 Duplicate atom serial number found: 5622 
    3870 Duplicate atom serial number found: 5623 
    3871 Duplicate atom serial number found: 5624 
    3872 364 messages similar to the above omitted 
    3873 Ignored bad PDB record found on line 114001 
    3874  
    3875  
    3876 Duplicate atom serial number found: 1 
    3877 Duplicate atom serial number found: 2 
    3878 Duplicate atom serial number found: 3 
    3879 Duplicate atom serial number found: 4 
    3880 Duplicate atom serial number found: 5 
    3881 229 messages similar to the above omitted 
    3882 Ignored bad PDB record found on line 114237 
    3883  
    3884  
    3885 Duplicate atom serial number found: 235 
    3886 Duplicate atom serial number found: 236 
    3887 Duplicate atom serial number found: 237 
    3888 Duplicate atom serial number found: 238 
    3889 Duplicate atom serial number found: 239 
    3890 2492 messages similar to the above omitted 
    3891 Ignored bad PDB record found on line 116736 
    3892  
    3893  
    3894 Duplicate atom serial number found: 2732 
    3895 Duplicate atom serial number found: 2733 
    3896 Duplicate atom serial number found: 2734 
    3897 Duplicate atom serial number found: 2735 
    3898 Duplicate atom serial number found: 2736 
    3899 2038 messages similar to the above omitted 
    3900 Ignored bad PDB record found on line 118781 
    3901  
    3902  
    3903 Duplicate atom serial number found: 4775 
    3904 Duplicate atom serial number found: 4776 
    3905 Duplicate atom serial number found: 4777 
    3906 Duplicate atom serial number found: 4778 
    3907 Duplicate atom serial number found: 4779 
    3908 451 messages similar to the above omitted 
    3909 Ignored bad PDB record found on line 119239 
    3910  
    3911  
    3912 Duplicate atom serial number found: 5231 
    3913 Duplicate atom serial number found: 5232 
    3914 Duplicate atom serial number found: 5233 
    3915 Duplicate atom serial number found: 5234 
    3916 Duplicate atom serial number found: 5235 
    3917 384 messages similar to the above omitted 
    3918 Ignored bad PDB record found on line 119630 
    3919  
    3920  
    3921 Duplicate atom serial number found: 5620 
    3922 Duplicate atom serial number found: 5621 
    3923 Duplicate atom serial number found: 5622 
    3924 Duplicate atom serial number found: 5623 
    3925 Duplicate atom serial number found: 5624 
    3926 364 messages similar to the above omitted 
    3927 Ignored bad PDB record found on line 120001 
    3928  
    3929  
    3930 Duplicate atom serial number found: 1 
    3931 Duplicate atom serial number found: 2 
    3932 Duplicate atom serial number found: 3 
    3933 Duplicate atom serial number found: 4 
    3934 Duplicate atom serial number found: 5 
    3935 229 messages similar to the above omitted 
    3936 Ignored bad PDB record found on line 120237 
    3937  
    3938  
    3939 Duplicate atom serial number found: 235 
    3940 Duplicate atom serial number found: 236 
    3941 Duplicate atom serial number found: 237 
    3942 Duplicate atom serial number found: 238 
    3943 Duplicate atom serial number found: 239 
    3944 2492 messages similar to the above omitted 
    3945 Ignored bad PDB record found on line 122736 
    3946  
    3947  
    3948 Duplicate atom serial number found: 2732 
    3949 Duplicate atom serial number found: 2733 
    3950 Duplicate atom serial number found: 2734 
    3951 Duplicate atom serial number found: 2735 
    3952 Duplicate atom serial number found: 2736 
    3953 2038 messages similar to the above omitted 
    3954 Ignored bad PDB record found on line 124781 
    3955  
    3956  
    3957 Duplicate atom serial number found: 4775 
    3958 Duplicate atom serial number found: 4776 
    3959 Duplicate atom serial number found: 4777 
    3960 Duplicate atom serial number found: 4778 
    3961 Duplicate atom serial number found: 4779 
    3962 451 messages similar to the above omitted 
    3963 Ignored bad PDB record found on line 125239 
    3964  
    3965  
    3966 Duplicate atom serial number found: 5231 
    3967 Duplicate atom serial number found: 5232 
    3968 Duplicate atom serial number found: 5233 
    3969 Duplicate atom serial number found: 5234 
    3970 Duplicate atom serial number found: 5235 
    3971 384 messages similar to the above omitted 
    3972 Ignored bad PDB record found on line 125630 
    3973  
    3974  
    3975 Duplicate atom serial number found: 5620 
    3976 Duplicate atom serial number found: 5621 
    3977 Duplicate atom serial number found: 5622 
    3978 Duplicate atom serial number found: 5623 
    3979 Duplicate atom serial number found: 5624 
    3980 364 messages similar to the above omitted 
    3981 Ignored bad PDB record found on line 126001 
    3982  
    3983  
    3984 Duplicate atom serial number found: 1 
    3985 Duplicate atom serial number found: 2 
    3986 Duplicate atom serial number found: 3 
    3987 Duplicate atom serial number found: 4 
    3988 Duplicate atom serial number found: 5 
    3989 229 messages similar to the above omitted 
    3990 Ignored bad PDB record found on line 126237 
    3991  
    3992  
    3993 Duplicate atom serial number found: 235 
    3994 Duplicate atom serial number found: 236 
    3995 Duplicate atom serial number found: 237 
    3996 Duplicate atom serial number found: 238 
    3997 Duplicate atom serial number found: 239 
    3998 2492 messages similar to the above omitted 
    3999 Ignored bad PDB record found on line 128736 
    4000  
    4001  
    4002 Duplicate atom serial number found: 2732 
    4003 Duplicate atom serial number found: 2733 
    4004 Duplicate atom serial number found: 2734 
    4005 Duplicate atom serial number found: 2735 
    4006 Duplicate atom serial number found: 2736 
    4007 2038 messages similar to the above omitted 
    4008 Ignored bad PDB record found on line 130781 
    4009  
    4010  
    4011 Duplicate atom serial number found: 4775 
    4012 Duplicate atom serial number found: 4776 
    4013 Duplicate atom serial number found: 4777 
    4014 Duplicate atom serial number found: 4778 
    4015 Duplicate atom serial number found: 4779 
    4016 451 messages similar to the above omitted 
    4017 Ignored bad PDB record found on line 131239 
    4018  
    4019  
    4020 Duplicate atom serial number found: 5231 
    4021 Duplicate atom serial number found: 5232 
    4022 Duplicate atom serial number found: 5233 
    4023 Duplicate atom serial number found: 5234 
    4024 Duplicate atom serial number found: 5235 
    4025 384 messages similar to the above omitted 
    4026 Ignored bad PDB record found on line 131630 
    4027  
    4028  
    4029 Duplicate atom serial number found: 5620 
    4030 Duplicate atom serial number found: 5621 
    4031 Duplicate atom serial number found: 5622 
    4032 Duplicate atom serial number found: 5623 
    4033 Duplicate atom serial number found: 5624 
    4034 364 messages similar to the above omitted 
    4035 Ignored bad PDB record found on line 132001 
    4036  
    4037  
    4038 Duplicate atom serial number found: 1 
    4039 Duplicate atom serial number found: 2 
    4040 Duplicate atom serial number found: 3 
    4041 Duplicate atom serial number found: 4 
    4042 Duplicate atom serial number found: 5 
    4043 229 messages similar to the above omitted 
    4044 Ignored bad PDB record found on line 132237 
    4045  
    4046  
    4047 Duplicate atom serial number found: 235 
    4048 Duplicate atom serial number found: 236 
    4049 Duplicate atom serial number found: 237 
    4050 Duplicate atom serial number found: 238 
    4051 Duplicate atom serial number found: 239 
    4052 2492 messages similar to the above omitted 
    4053 Ignored bad PDB record found on line 134736 
    4054  
    4055  
    4056 Duplicate atom serial number found: 2732 
    4057 Duplicate atom serial number found: 2733 
    4058 Duplicate atom serial number found: 2734 
    4059 Duplicate atom serial number found: 2735 
    4060 Duplicate atom serial number found: 2736 
    4061 2038 messages similar to the above omitted 
    4062 Ignored bad PDB record found on line 136781 
    4063  
    4064  
    4065 Duplicate atom serial number found: 4775 
    4066 Duplicate atom serial number found: 4776 
    4067 Duplicate atom serial number found: 4777 
    4068 Duplicate atom serial number found: 4778 
    4069 Duplicate atom serial number found: 4779 
    4070 451 messages similar to the above omitted 
    4071 Ignored bad PDB record found on line 137239 
    4072  
    4073  
    4074 Duplicate atom serial number found: 5231 
    4075 Duplicate atom serial number found: 5232 
    4076 Duplicate atom serial number found: 5233 
    4077 Duplicate atom serial number found: 5234 
    4078 Duplicate atom serial number found: 5235 
    4079 384 messages similar to the above omitted 
    4080 Ignored bad PDB record found on line 137630 
    4081  
    4082  
    4083 Duplicate atom serial number found: 5620 
    4084 Duplicate atom serial number found: 5621 
    4085 Duplicate atom serial number found: 5622 
    4086 Duplicate atom serial number found: 5623 
    4087 Duplicate atom serial number found: 5624 
    4088 364 messages similar to the above omitted 
    4089 Ignored bad PDB record found on line 138001 
    4090  
    4091  
    4092 Duplicate atom serial number found: 1 
    4093 Duplicate atom serial number found: 2 
    4094 Duplicate atom serial number found: 3 
    4095 Duplicate atom serial number found: 4 
    4096 Duplicate atom serial number found: 5 
    4097 229 messages similar to the above omitted 
    4098 Ignored bad PDB record found on line 138237 
    4099  
    4100  
    4101 Duplicate atom serial number found: 235 
    4102 Duplicate atom serial number found: 236 
    4103 Duplicate atom serial number found: 237 
    4104 Duplicate atom serial number found: 238 
    4105 Duplicate atom serial number found: 239 
    4106 2492 messages similar to the above omitted 
    4107 Ignored bad PDB record found on line 140736 
    4108  
    4109  
    4110 Duplicate atom serial number found: 2732 
    4111 Duplicate atom serial number found: 2733 
    4112 Duplicate atom serial number found: 2734 
    4113 Duplicate atom serial number found: 2735 
    4114 Duplicate atom serial number found: 2736 
    4115 2038 messages similar to the above omitted 
    4116 Ignored bad PDB record found on line 142781 
    4117  
    4118  
    4119 Duplicate atom serial number found: 4775 
    4120 Duplicate atom serial number found: 4776 
    4121 Duplicate atom serial number found: 4777 
    4122 Duplicate atom serial number found: 4778 
    4123 Duplicate atom serial number found: 4779 
    4124 451 messages similar to the above omitted 
    4125 Ignored bad PDB record found on line 143239 
    4126  
    4127  
    4128 Duplicate atom serial number found: 5231 
    4129 Duplicate atom serial number found: 5232 
    4130 Duplicate atom serial number found: 5233 
    4131 Duplicate atom serial number found: 5234 
    4132 Duplicate atom serial number found: 5235 
    4133 384 messages similar to the above omitted 
    4134 Ignored bad PDB record found on line 143630 
    4135  
    4136  
    4137 Duplicate atom serial number found: 5620 
    4138 Duplicate atom serial number found: 5621 
    4139 Duplicate atom serial number found: 5622 
    4140 Duplicate atom serial number found: 5623 
    4141 Duplicate atom serial number found: 5624 
    4142 364 messages similar to the above omitted 
    4143 Ignored bad PDB record found on line 144001 
    4144  
    4145  
    4146 Duplicate atom serial number found: 1 
    4147 Duplicate atom serial number found: 2 
    4148 Duplicate atom serial number found: 3 
    4149 Duplicate atom serial number found: 4 
    4150 Duplicate atom serial number found: 5 
    4151 229 messages similar to the above omitted 
    4152 Ignored bad PDB record found on line 144237 
    4153  
    4154  
    4155 Duplicate atom serial number found: 235 
    4156 Duplicate atom serial number found: 236 
    4157 Duplicate atom serial number found: 237 
    4158 Duplicate atom serial number found: 238 
    4159 Duplicate atom serial number found: 239 
    4160 2492 messages similar to the above omitted 
    4161 Ignored bad PDB record found on line 146736 
    4162  
    4163  
    4164 Duplicate atom serial number found: 2732 
    4165 Duplicate atom serial number found: 2733 
    4166 Duplicate atom serial number found: 2734 
    4167 Duplicate atom serial number found: 2735 
    4168 Duplicate atom serial number found: 2736 
    4169 2038 messages similar to the above omitted 
    4170 Ignored bad PDB record found on line 148781 
    4171  
    4172  
    4173 Duplicate atom serial number found: 4775 
    4174 Duplicate atom serial number found: 4776 
    4175 Duplicate atom serial number found: 4777 
    4176 Duplicate atom serial number found: 4778 
    4177 Duplicate atom serial number found: 4779 
    4178 451 messages similar to the above omitted 
    4179 Ignored bad PDB record found on line 149239 
    4180  
    4181  
    4182 Duplicate atom serial number found: 5231 
    4183 Duplicate atom serial number found: 5232 
    4184 Duplicate atom serial number found: 5233 
    4185 Duplicate atom serial number found: 5234 
    4186 Duplicate atom serial number found: 5235 
    4187 384 messages similar to the above omitted 
    4188 Ignored bad PDB record found on line 149630 
    4189  
    4190  
    4191 Duplicate atom serial number found: 5620 
    4192 Duplicate atom serial number found: 5621 
    4193 Duplicate atom serial number found: 5622 
    4194 Duplicate atom serial number found: 5623 
    4195 Duplicate atom serial number found: 5624 
    4196 364 messages similar to the above omitted 
    4197 Ignored bad PDB record found on line 150001 
    4198  
    4199  
    4200 Duplicate atom serial number found: 1 
    4201 Duplicate atom serial number found: 2 
    4202 Duplicate atom serial number found: 3 
    4203 Duplicate atom serial number found: 4 
    4204 Duplicate atom serial number found: 5 
    4205 229 messages similar to the above omitted 
    4206 Ignored bad PDB record found on line 150237 
    4207  
    4208  
    4209 Duplicate atom serial number found: 235 
    4210 Duplicate atom serial number found: 236 
    4211 Duplicate atom serial number found: 237 
    4212 Duplicate atom serial number found: 238 
    4213 Duplicate atom serial number found: 239 
    4214 2492 messages similar to the above omitted 
    4215 Ignored bad PDB record found on line 152736 
    4216  
    4217  
    4218 Duplicate atom serial number found: 2732 
    4219 Duplicate atom serial number found: 2733 
    4220 Duplicate atom serial number found: 2734 
    4221 Duplicate atom serial number found: 2735 
    4222 Duplicate atom serial number found: 2736 
    4223 2038 messages similar to the above omitted 
    4224 Ignored bad PDB record found on line 154781 
    4225  
    4226  
    4227 Duplicate atom serial number found: 4775 
    4228 Duplicate atom serial number found: 4776 
    4229 Duplicate atom serial number found: 4777 
    4230 Duplicate atom serial number found: 4778 
    4231 Duplicate atom serial number found: 4779 
    4232 451 messages similar to the above omitted 
    4233 Ignored bad PDB record found on line 155239 
    4234  
    4235  
    4236 Duplicate atom serial number found: 5231 
    4237 Duplicate atom serial number found: 5232 
    4238 Duplicate atom serial number found: 5233 
    4239 Duplicate atom serial number found: 5234 
    4240 Duplicate atom serial number found: 5235 
    4241 384 messages similar to the above omitted 
    4242 Ignored bad PDB record found on line 155630 
    4243  
    4244  
    4245 Duplicate atom serial number found: 5620 
    4246 Duplicate atom serial number found: 5621 
    4247 Duplicate atom serial number found: 5622 
    4248 Duplicate atom serial number found: 5623 
    4249 Duplicate atom serial number found: 5624 
    4250 364 messages similar to the above omitted 
    4251 Ignored bad PDB record found on line 156001 
    4252  
    4253  
    4254 Duplicate atom serial number found: 1 
    4255 Duplicate atom serial number found: 2 
    4256 Duplicate atom serial number found: 3 
    4257 Duplicate atom serial number found: 4 
    4258 Duplicate atom serial number found: 5 
    4259 229 messages similar to the above omitted 
    4260 Ignored bad PDB record found on line 156237 
    4261  
    4262  
    4263 Duplicate atom serial number found: 235 
    4264 Duplicate atom serial number found: 236 
    4265 Duplicate atom serial number found: 237 
    4266 Duplicate atom serial number found: 238 
    4267 Duplicate atom serial number found: 239 
    4268 2492 messages similar to the above omitted 
    4269 Ignored bad PDB record found on line 158736 
    4270  
    4271  
    4272 Duplicate atom serial number found: 2732 
    4273 Duplicate atom serial number found: 2733 
    4274 Duplicate atom serial number found: 2734 
    4275 Duplicate atom serial number found: 2735 
    4276 Duplicate atom serial number found: 2736 
    4277 2038 messages similar to the above omitted 
    4278 Ignored bad PDB record found on line 160781 
    4279  
    4280  
    4281 Duplicate atom serial number found: 4775 
    4282 Duplicate atom serial number found: 4776 
    4283 Duplicate atom serial number found: 4777 
    4284 Duplicate atom serial number found: 4778 
    4285 Duplicate atom serial number found: 4779 
    4286 451 messages similar to the above omitted 
    4287 Ignored bad PDB record found on line 161239 
    4288  
    4289  
    4290 Duplicate atom serial number found: 5231 
    4291 Duplicate atom serial number found: 5232 
    4292 Duplicate atom serial number found: 5233 
    4293 Duplicate atom serial number found: 5234 
    4294 Duplicate atom serial number found: 5235 
    4295 384 messages similar to the above omitted 
    4296 Ignored bad PDB record found on line 161630 
    4297  
    4298  
    4299 Duplicate atom serial number found: 5620 
    4300 Duplicate atom serial number found: 5621 
    4301 Duplicate atom serial number found: 5622 
    4302 Duplicate atom serial number found: 5623 
    4303 Duplicate atom serial number found: 5624 
    4304 364 messages similar to the above omitted 
    4305 Ignored bad PDB record found on line 162001 
    4306  
    4307  
    4308 Duplicate atom serial number found: 1 
    4309 Duplicate atom serial number found: 2 
    4310 Duplicate atom serial number found: 3 
    4311 Duplicate atom serial number found: 4 
    4312 Duplicate atom serial number found: 5 
    4313 229 messages similar to the above omitted 
    4314 Ignored bad PDB record found on line 162237 
    4315  
    4316  
    4317 Duplicate atom serial number found: 235 
    4318 Duplicate atom serial number found: 236 
    4319 Duplicate atom serial number found: 237 
    4320 Duplicate atom serial number found: 238 
    4321 Duplicate atom serial number found: 239 
    4322 2492 messages similar to the above omitted 
    4323 Ignored bad PDB record found on line 164736 
    4324  
    4325  
    4326 Duplicate atom serial number found: 2732 
    4327 Duplicate atom serial number found: 2733 
    4328 Duplicate atom serial number found: 2734 
    4329 Duplicate atom serial number found: 2735 
    4330 Duplicate atom serial number found: 2736 
    4331 2038 messages similar to the above omitted 
    4332 Ignored bad PDB record found on line 166781 
    4333  
    4334  
    4335 Duplicate atom serial number found: 4775 
    4336 Duplicate atom serial number found: 4776 
    4337 Duplicate atom serial number found: 4777 
    4338 Duplicate atom serial number found: 4778 
    4339 Duplicate atom serial number found: 4779 
    4340 451 messages similar to the above omitted 
    4341 Ignored bad PDB record found on line 167239 
    4342  
    4343  
    4344 Duplicate atom serial number found: 5231 
    4345 Duplicate atom serial number found: 5232 
    4346 Duplicate atom serial number found: 5233 
    4347 Duplicate atom serial number found: 5234 
    4348 Duplicate atom serial number found: 5235 
    4349 384 messages similar to the above omitted 
    4350 Ignored bad PDB record found on line 167630 
    4351  
    4352  
    4353 Duplicate atom serial number found: 5620 
    4354 Duplicate atom serial number found: 5621 
    4355 Duplicate atom serial number found: 5622 
    4356 Duplicate atom serial number found: 5623 
    4357 Duplicate atom serial number found: 5624 
    4358 364 messages similar to the above omitted 
    4359 Ignored bad PDB record found on line 168001 
    4360  
    4361  
    4362 Duplicate atom serial number found: 1 
    4363 Duplicate atom serial number found: 2 
    4364 Duplicate atom serial number found: 3 
    4365 Duplicate atom serial number found: 4 
    4366 Duplicate atom serial number found: 5 
    4367 229 messages similar to the above omitted 
    4368 Ignored bad PDB record found on line 168237 
    4369  
    4370  
    4371 Duplicate atom serial number found: 235 
    4372 Duplicate atom serial number found: 236 
    4373 Duplicate atom serial number found: 237 
    4374 Duplicate atom serial number found: 238 
    4375 Duplicate atom serial number found: 239 
    4376 2492 messages similar to the above omitted 
    4377 Ignored bad PDB record found on line 170736 
    4378  
    4379  
    4380 Duplicate atom serial number found: 2732 
    4381 Duplicate atom serial number found: 2733 
    4382 Duplicate atom serial number found: 2734 
    4383 Duplicate atom serial number found: 2735 
    4384 Duplicate atom serial number found: 2736 
    4385 2038 messages similar to the above omitted 
    4386 Ignored bad PDB record found on line 172781 
    4387  
    4388  
    4389 Duplicate atom serial number found: 4775 
    4390 Duplicate atom serial number found: 4776 
    4391 Duplicate atom serial number found: 4777 
    4392 Duplicate atom serial number found: 4778 
    4393 Duplicate atom serial number found: 4779 
    4394 451 messages similar to the above omitted 
    4395 Ignored bad PDB record found on line 173239 
    4396  
    4397  
    4398 Duplicate atom serial number found: 5231 
    4399 Duplicate atom serial number found: 5232 
    4400 Duplicate atom serial number found: 5233 
    4401 Duplicate atom serial number found: 5234 
    4402 Duplicate atom serial number found: 5235 
    4403 384 messages similar to the above omitted 
    4404 Ignored bad PDB record found on line 173630 
    4405  
    4406  
    4407 Duplicate atom serial number found: 5620 
    4408 Duplicate atom serial number found: 5621 
    4409 Duplicate atom serial number found: 5622 
    4410 Duplicate atom serial number found: 5623 
    4411 Duplicate atom serial number found: 5624 
    4412 364 messages similar to the above omitted 
    4413 Ignored bad PDB record found on line 174001 
    4414  
    4415  
    4416 Duplicate atom serial number found: 1 
    4417 Duplicate atom serial number found: 2 
    4418 Duplicate atom serial number found: 3 
    4419 Duplicate atom serial number found: 4 
    4420 Duplicate atom serial number found: 5 
    4421 229 messages similar to the above omitted 
    4422 Ignored bad PDB record found on line 174237 
    4423  
    4424  
    4425 Duplicate atom serial number found: 235 
    4426 Duplicate atom serial number found: 236 
    4427 Duplicate atom serial number found: 237 
    4428 Duplicate atom serial number found: 238 
    4429 Duplicate atom serial number found: 239 
    4430 2492 messages similar to the above omitted 
    4431 Ignored bad PDB record found on line 176736 
    4432  
    4433  
    4434 Duplicate atom serial number found: 2732 
    4435 Duplicate atom serial number found: 2733 
    4436 Duplicate atom serial number found: 2734 
    4437 Duplicate atom serial number found: 2735 
    4438 Duplicate atom serial number found: 2736 
    4439 2038 messages similar to the above omitted 
    4440 Ignored bad PDB record found on line 178781 
    4441  
    4442  
    4443 Duplicate atom serial number found: 4775 
    4444 Duplicate atom serial number found: 4776 
    4445 Duplicate atom serial number found: 4777 
    4446 Duplicate atom serial number found: 4778 
    4447 Duplicate atom serial number found: 4779 
    4448 451 messages similar to the above omitted 
    4449 Ignored bad PDB record found on line 179239 
    4450  
    4451  
    4452 Duplicate atom serial number found: 5231 
    4453 Duplicate atom serial number found: 5232 
    4454 Duplicate atom serial number found: 5233 
    4455 Duplicate atom serial number found: 5234 
    4456 Duplicate atom serial number found: 5235 
    4457 384 messages similar to the above omitted 
    4458 Ignored bad PDB record found on line 179630 
    4459  
    4460  
    4461 Duplicate atom serial number found: 5620 
    4462 Duplicate atom serial number found: 5621 
    4463 Duplicate atom serial number found: 5622 
    4464 Duplicate atom serial number found: 5623 
    4465 Duplicate atom serial number found: 5624 
    4466 364 messages similar to the above omitted 
    4467 Ignored bad PDB record found on line 180001 
    4468  
    4469  
    4470 Duplicate atom serial number found: 1 
    4471 Duplicate atom serial number found: 2 
    4472 Duplicate atom serial number found: 3 
    4473 Duplicate atom serial number found: 4 
    4474 Duplicate atom serial number found: 5 
    4475 229 messages similar to the above omitted 
    4476 Ignored bad PDB record found on line 180237 
    4477  
    4478  
    4479 Duplicate atom serial number found: 235 
    4480 Duplicate atom serial number found: 236 
    4481 Duplicate atom serial number found: 237 
    4482 Duplicate atom serial number found: 238 
    4483 Duplicate atom serial number found: 239 
    4484 2492 messages similar to the above omitted 
    4485 Ignored bad PDB record found on line 182736 
    4486  
    4487  
    4488 Duplicate atom serial number found: 2732 
    4489 Duplicate atom serial number found: 2733 
    4490 Duplicate atom serial number found: 2734 
    4491 Duplicate atom serial number found: 2735 
    4492 Duplicate atom serial number found: 2736 
    4493 2038 messages similar to the above omitted 
    4494 Ignored bad PDB record found on line 184781 
    4495  
    4496  
    4497 Duplicate atom serial number found: 4775 
    4498 Duplicate atom serial number found: 4776 
    4499 Duplicate atom serial number found: 4777 
    4500 Duplicate atom serial number found: 4778 
    4501 Duplicate atom serial number found: 4779 
    4502 451 messages similar to the above omitted 
    4503 Ignored bad PDB record found on line 185239 
    4504  
    4505  
    4506 Duplicate atom serial number found: 5231 
    4507 Duplicate atom serial number found: 5232 
    4508 Duplicate atom serial number found: 5233 
    4509 Duplicate atom serial number found: 5234 
    4510 Duplicate atom serial number found: 5235 
    4511 384 messages similar to the above omitted 
    4512 Ignored bad PDB record found on line 185630 
    4513  
    4514  
    4515 Duplicate atom serial number found: 5620 
    4516 Duplicate atom serial number found: 5621 
    4517 Duplicate atom serial number found: 5622 
    4518 Duplicate atom serial number found: 5623 
    4519 Duplicate atom serial number found: 5624 
    4520 364 messages similar to the above omitted 
    4521 Ignored bad PDB record found on line 186001 
    4522  
    4523  
    4524 Duplicate atom serial number found: 1 
    4525 Duplicate atom serial number found: 2 
    4526 Duplicate atom serial number found: 3 
    4527 Duplicate atom serial number found: 4 
    4528 Duplicate atom serial number found: 5 
    4529 229 messages similar to the above omitted 
    4530 Ignored bad PDB record found on line 186237 
    4531  
    4532  
    4533 Duplicate atom serial number found: 235 
    4534 Duplicate atom serial number found: 236 
    4535 Duplicate atom serial number found: 237 
    4536 Duplicate atom serial number found: 238 
    4537 Duplicate atom serial number found: 239 
    4538 2492 messages similar to the above omitted 
    4539 Ignored bad PDB record found on line 188736 
    4540  
    4541  
    4542 Duplicate atom serial number found: 2732 
    4543 Duplicate atom serial number found: 2733 
    4544 Duplicate atom serial number found: 2734 
    4545 Duplicate atom serial number found: 2735 
    4546 Duplicate atom serial number found: 2736 
    4547 2038 messages similar to the above omitted 
    4548 Ignored bad PDB record found on line 190781 
    4549  
    4550  
    4551 Duplicate atom serial number found: 4775 
    4552 Duplicate atom serial number found: 4776 
    4553 Duplicate atom serial number found: 4777 
    4554 Duplicate atom serial number found: 4778 
    4555 Duplicate atom serial number found: 4779 
    4556 451 messages similar to the above omitted 
    4557 Ignored bad PDB record found on line 191239 
    4558  
    4559  
    4560 Duplicate atom serial number found: 5231 
    4561 Duplicate atom serial number found: 5232 
    4562 Duplicate atom serial number found: 5233 
    4563 Duplicate atom serial number found: 5234 
    4564 Duplicate atom serial number found: 5235 
    4565 384 messages similar to the above omitted 
    4566 Ignored bad PDB record found on line 191630 
    4567  
    4568  
    4569 Duplicate atom serial number found: 5620 
    4570 Duplicate atom serial number found: 5621 
    4571 Duplicate atom serial number found: 5622 
    4572 Duplicate atom serial number found: 5623 
    4573 Duplicate atom serial number found: 5624 
    4574 364 messages similar to the above omitted 
    4575 Ignored bad PDB record found on line 192001 
    4576  
    4577  
    4578 Duplicate atom serial number found: 1 
    4579 Duplicate atom serial number found: 2 
    4580 Duplicate atom serial number found: 3 
    4581 Duplicate atom serial number found: 4 
    4582 Duplicate atom serial number found: 5 
    4583 229 messages similar to the above omitted 
    4584 Ignored bad PDB record found on line 192237 
    4585  
    4586  
    4587 Duplicate atom serial number found: 235 
    4588 Duplicate atom serial number found: 236 
    4589 Duplicate atom serial number found: 237 
    4590 Duplicate atom serial number found: 238 
    4591 Duplicate atom serial number found: 239 
    4592 2492 messages similar to the above omitted 
    4593 Ignored bad PDB record found on line 194736 
    4594  
    4595  
    4596 Duplicate atom serial number found: 2732 
    4597 Duplicate atom serial number found: 2733 
    4598 Duplicate atom serial number found: 2734 
    4599 Duplicate atom serial number found: 2735 
    4600 Duplicate atom serial number found: 2736 
    4601 2038 messages similar to the above omitted 
    4602 Ignored bad PDB record found on line 196781 
    4603  
    4604  
    4605 Duplicate atom serial number found: 4775 
    4606 Duplicate atom serial number found: 4776 
    4607 Duplicate atom serial number found: 4777 
    4608 Duplicate atom serial number found: 4778 
    4609 Duplicate atom serial number found: 4779 
    4610 451 messages similar to the above omitted 
    4611 Ignored bad PDB record found on line 197239 
    4612  
    4613  
    4614 Duplicate atom serial number found: 5231 
    4615 Duplicate atom serial number found: 5232 
    4616 Duplicate atom serial number found: 5233 
    4617 Duplicate atom serial number found: 5234 
    4618 Duplicate atom serial number found: 5235 
    4619 384 messages similar to the above omitted 
    4620 Ignored bad PDB record found on line 197630 
    4621  
    4622  
    4623 Duplicate atom serial number found: 5620 
    4624 Duplicate atom serial number found: 5621 
    4625 Duplicate atom serial number found: 5622 
    4626 Duplicate atom serial number found: 5623 
    4627 Duplicate atom serial number found: 5624 
    4628 364 messages similar to the above omitted 
    4629 Ignored bad PDB record found on line 198001 
    4630  
    4631  
    4632 Duplicate atom serial number found: 1 
    4633 Duplicate atom serial number found: 2 
    4634 Duplicate atom serial number found: 3 
    4635 Duplicate atom serial number found: 4 
    4636 Duplicate atom serial number found: 5 
    4637 229 messages similar to the above omitted 
    4638 Ignored bad PDB record found on line 198237 
    4639  
    4640  
    4641 Duplicate atom serial number found: 235 
    4642 Duplicate atom serial number found: 236 
    4643 Duplicate atom serial number found: 237 
    4644 Duplicate atom serial number found: 238 
    4645 Duplicate atom serial number found: 239 
    4646 2492 messages similar to the above omitted 
    4647 Ignored bad PDB record found on line 200736 
    4648  
    4649  
    4650 Duplicate atom serial number found: 2732 
    4651 Duplicate atom serial number found: 2733 
    4652 Duplicate atom serial number found: 2734 
    4653 Duplicate atom serial number found: 2735 
    4654 Duplicate atom serial number found: 2736 
    4655 2038 messages similar to the above omitted 
    4656 Ignored bad PDB record found on line 202781 
    4657  
    4658  
    4659 Duplicate atom serial number found: 4775 
    4660 Duplicate atom serial number found: 4776 
    4661 Duplicate atom serial number found: 4777 
    4662 Duplicate atom serial number found: 4778 
    4663 Duplicate atom serial number found: 4779 
    4664 451 messages similar to the above omitted 
    4665 Ignored bad PDB record found on line 203239 
    4666  
    4667  
    4668 Duplicate atom serial number found: 5231 
    4669 Duplicate atom serial number found: 5232 
    4670 Duplicate atom serial number found: 5233 
    4671 Duplicate atom serial number found: 5234 
    4672 Duplicate atom serial number found: 5235 
    4673 384 messages similar to the above omitted 
    4674 Ignored bad PDB record found on line 203630 
    4675  
    4676  
    4677 Duplicate atom serial number found: 5620 
    4678 Duplicate atom serial number found: 5621 
    4679 Duplicate atom serial number found: 5622 
    4680 Duplicate atom serial number found: 5623 
    4681 Duplicate atom serial number found: 5624 
    4682 364 messages similar to the above omitted 
    4683 Ignored bad PDB record found on line 204001 
    4684  
    4685  
    4686 Ignored bad PDB record found on line 204002 
    4687  
    4688 Chain information for NoDensity_PAA_apply_ncs_20.pdb #1 
    4689 --- 
    4690 Chain | Description 
    4691 A BC BF DB DE F FA FD FG HC HF I JB JE LA LD LG NC NF PB PE RA RD RG S TC TF
    4692 VB VE XA XD Z ZC ZF | No description available 
    4693 AA AD AG B CC CF EB EE G GA GD GG IC IF J KB KE MA MD MG OC OF QB QE SA SD SG
    4694 T UC UF WB WE YA YD | No description available 
    4695 AB AE CA CD CG D EC EF GB GE IA ID IG KC KF L MB ME N OA OD OG QC QF SB SE UA
    4696 UD UG W WC WF YB YE | No description available 
    4697 AC AF CB CE EA ED EG GC GF H IB IE KA KD KG MC MF OB OE Q QA QD QG R SC SF UB
    4698 UE WA WD WG Y YC YF | No description available 
    4699 BA BD BG C DC DF FB FE HA HD HG JC JF K LB LE M NA ND NG PC PF RB RE TA TD TG
    4700 V VC VF XB XE ZA ZD | No description available 
    4701 BB BE DA DD DG E FC FF HB HE JA JD JG LC LF NB NE O P PA PD PG RC RF TB TE VA
    4702 VD VG X XC XF ZB ZE | No description available 
    4703  
    4704 
    4705 > select
    4706 > /A,BC,BF,DB,DE,F-FA,FD,FG,HC,HF,I,JB,JE,LA,LD,LG,NC,NF,PB,PE,RA,RD,RG-S,TC,TF,VB,VE,XA,XD,Z,ZC,ZF
    4707 
    4708 7956 atoms, 7922 bonds, 1598 residues, 1 model selected 
    4709 
    4710 > color sel #0f98f7ff
    4711 
    4712 > select
    4713 > /AA,AD,AG-B,CC,CF,EB,EE,G-GA,GD,GG,IC,IF,J,KB,KE,MA,MD,MG,OC,OF,QB,QE,SA,SD,SG-T,UC,UF,WB,WE,YA,YD
    4714 
    4715 84898 atoms, 85510 bonds, 10846 residues, 1 model selected 
    4716 
    4717 > color sel #ed271dff
    4718 
    4719 > select
    4720 > /BA,BD,BG-C,DC,DF,FB,FE,HA,HD,HG,JC,JF,K,LB,LE,M,NA,ND,NG,PC,PF,RB,RE,TA,TD,TG,V,VC,VF,XB,XE,ZA,ZD
    4721 
    4722 69462 atoms, 70754 bonds, 9758 residues, 1 model selected 
    4723 
    4724 > color sel #ffb60aff
    4725 
    4726 > select
    4727 > /AB,AE,CA,CD,CG-D,EC,EF,GB,GE,IA,ID,IG,KC,KF,L,MB,ME,N,OA,OD,OG,QC,QF,SB,SE,UA,UD,UG,W,WC,WF,YB,YE
    4728 
    4729 15504 atoms, 15470 bonds, 3162 residues, 1 model selected 
    4730 
    4731 > color sel #8c15b7ff
    4732 
    4733 > select
    4734 > /AC,AF,CB,CE,EA,ED,EG,GC,GF,H,IB,IE,KA,KD,KG,MC,MF,OB,OE,Q-QA,QD,QG-R,SC,SF,UB,UE,WA,WD,WG,Y,YC,YF
    4735 
    4736 12546 atoms, 12512 bonds, 2550 residues, 1 model selected 
    4737 
    4738 > color sel #b581c5ff
    4739 
    4740 > select
    4741 > /BB,BE,DA,DD,DG-E,FC,FF,HB,HE,JA,JD,JG,LC,LF,NB,NE,O,P-PA,PD,PG,RC,RF,TB,TE,VA,VD,VG,X,XC,XF,ZB,ZE
    4742 
    4743 13226 atoms, 13192 bonds, 2686 residues, 1 model selected 
    4744 
    4745 > color sel #dc4166ff
    4746 
    4747 > select add #1
    4748 
    4749 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    4750 
    4751 > select subtract #1
    4752 
    4753 Nothing selected 
    4754 
    4755 > show atoms
    4756 
    4757 > hide atoms
    4758 
    4759 > show cartoons
    4760 
    4761 > cartoon style width 3.5 thickness 2.8
    4762 
    4763 > lighting soft
    4764 
    4765 > select /f/g/m/n/p/q
    4766 
    4767 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    4768 
    4769 > turn y 5
    4770 
    4771 > turn y -5
    4772 
    4773 [Repeated 8 time(s)]
    4774 
    4775 > select ~sel & ##selected
    4776 
    4777 197604 atoms, 199320 bonds, 29700 residues, 1 model selected 
    4778 
    4779 > color sel dark gray
    4780 
    4781 > select add #1
    4782 
    4783 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    4784 
    4785 > select subtract #1
    4786 
    4787 Nothing selected 
    4788 
    4789 > turn x
    4790 
    4791 > select /f/g/m/n/p/q
    4792 
    4793 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    4794 
    4795 > select ~sel & ##selected
    4796 
    4797 197604 atoms, 199320 bonds, 29700 residues, 1 model selected 
    4798 
    4799 > transparency sel 90 target c
    4800 
    4801 > transparency sel 100 target c
    4802 
    4803 > select add #1
    4804 
    4805 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    4806 
    4807 > select subtract #1
    4808 
    4809 Nothing selected 
    4810 
    4811 > select /f/g/m/n/p/q
    4812 
    4813 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    4814 
    4815 > select ~sel & ##selected
    4816 
    4817 197604 atoms, 199320 bonds, 29700 residues, 1 model selected 
    4818 
    4819 > delete sel
    4820 
    4821 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    4822 > ring]/EMDB and PDB Upload/C-ring/34-mer C-ring/C34_C-ring_RSR158.pdb"
    4823 
    4824 Chain information for C34_C-ring_RSR158.pdb #2 
    4825 --- 
    4826 Chain | Description 
    4827 A BC BF DB DE F FA FD FG HC HF I JB JE LA LD LG NC NF PB PE RA RD RG S TC TF
    4828 VB VE XA XD Z ZC ZF | No description available 
    4829 AA AD AG B CC CF EB EE G GA GD GG IC IF J KB KE MA MD MG OC OF QB QE SA SD SG
    4830 T UC UF WB WE YA YD | No description available 
    4831 AB AE CA CD CG D EC EF GB GE IA ID IG KC KF L MB ME N OA OD OG QC QF SB SE UA
    4832 UD UG W WC WF YB YE | No description available 
    4833 AC AF CB CE EA ED EG GC GF H IB IE KA KD KG MC MF OB OE Q QA QD QG R SC SF UB
    4834 UE WA WD WG Y YC YF | No description available 
    4835 BA BD BG C DC DF FB FE HA HD HG JC JF K LB LE M NA ND NG PC PF RB RE TA TD TG
    4836 V VC VF XB XE ZA ZD | No description available 
    4837 BB BE DA DD DG E FC FF HB HE JA JD JG LC LF NB NE O P PA PD PG RC RF TB TE VA
    4838 VD VG X XC XF ZB ZE | No description available 
    4839  
    4840 
    4841 > select /f/g/m/n/p/q
    4842 
    4843 12018 atoms, 12123 bonds, 1810 residues, 2 models selected 
    4844 
    4845 > select subtract #1
    4846 
    4847 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    4848 
    4849 > select ~sel & ##selected
    4850 
    4851 198990 atoms, 200739 bonds, 30030 residues, 1 model selected 
    4852 
    4853 > delete sel
    4854 
    4855 > ui tool show Matchmaker
    4856 
    4857 > select add #2
    4858 
    4859 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    4860 
    4861 > select subtract #2
    4862 
    4863 Nothing selected 
    4864 
    4865 > matchmaker #2/N#2/P#2/Q to #1/N#1/P#1/Q pairing ss
    4866 
    4867 Parameters 
    4868 --- 
    4869 Chain pairing | ss 
    4870 Alignment algorithm | Needleman-Wunsch 
    4871 Similarity matrix | BLOSUM-62 
    4872 SS fraction | 0.3 
    4873 Gap open (HH/SS/other) | 18/18/6 
    4874 Gap extend | 1 
    4875 SS matrix |  |  | H | S | O 
    4876 ---|---|---|--- 
    4877 H | 6 | -9 | -6 
    4878 S |  | 6 | -6 
    4879 O |  |  | 4 
    4880 Iteration cutoff | 2 
    4881  
    4882 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain N (#1) with C34_C-
    4883 ring_RSR158.pdb, chain N (#2), sequence alignment score = 464 
    4884 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain P (#1) with C34_C-
    4885 ring_RSR158.pdb, chain P (#2), sequence alignment score = 380.9 
    4886 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain Q (#1) with C34_C-
    4887 ring_RSR158.pdb, chain Q (#2), sequence alignment score = 368.6 
    4888 RMSD between 247 pruned atom pairs is 0.168 angstroms; (across all 247 pairs:
    4889 0.168) 
    4890  
    4891 
    4892 > hide atoms
    4893 
    4894 > show cartoons
    4895 
    4896 > cartoon style width 3.5 thickness 2.8
    4897 
    4898 > select #2/f
    4899 
    4900 234 atoms, 233 bonds, 47 residues, 1 model selected 
    4901 
    4902 > ui tool show "Color Actions"
    4903 
    4904 > color sel #0f98f7ff
    4905 
    4906 > select #2/g
    4907 
    4908 2496 atoms, 2516 bonds, 320 residues, 1 model selected 
    4909 
    4910 > color sel #ed271dff
    4911 
    4912 > select #2/m
    4913 
    4914 2086 atoms, 2123 bonds, 296 residues, 1 model selected 
    4915 
    4916 > color sel #ffb60aff
    4917 
    4918 > select #2/n
    4919 
    4920 456 atoms, 455 bonds, 93 residues, 1 model selected 
    4921 
    4922 > color sel #8c15b7ff
    4923 
    4924 > select #2/p
    4925 
    4926 389 atoms, 388 bonds, 79 residues, 1 model selected 
    4927 
    4928 > color sel #b581c5ff
    4929 
    4930 > select #2/q
    4931 
    4932 369 atoms, 368 bonds, 75 residues, 1 model selected 
    4933 
    4934 > color sel #dc4166ff
    4935 
    4936 > select add #2
    4937 
    4938 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    4939 
    4940 > select subtract #2
    4941 
    4942 Nothing selected 
    4943 
    4944 > hide #2 models
    4945 
    4946 > show #2 models
    4947 
    4948 > transparency #2 90 target c
    4949 
    4950 > matchmaker #2 to #1
    4951 
    4952 Parameters 
    4953 --- 
    4954 Chain pairing | bb 
    4955 Alignment algorithm | Needleman-Wunsch 
    4956 Similarity matrix | BLOSUM-62 
    4957 SS fraction | 0.3 
    4958 Gap open (HH/SS/other) | 18/18/6 
    4959 Gap extend | 1 
    4960 SS matrix |  |  | H | S | O 
    4961 ---|---|---|--- 
    4962 H | 6 | -9 | -6 
    4963 S |  | 6 | -6 
    4964 O |  |  | 4 
    4965 Iteration cutoff | 2 
    4966  
    4967 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain G (#1) with C34_C-
    4968 ring_RSR158.pdb, chain G (#2), sequence alignment score = 1490.5 
    4969 RMSD between 21 pruned atom pairs is 0.864 angstroms; (across all 317 pairs:
    4970 27.470) 
    4971  
    4972 
    4973 > matchmaker #2/N#2/P#2/Q to #1/N#1/P#1/Q pairing ss
    4974 
    4975 Parameters 
    4976 --- 
    4977 Chain pairing | ss 
    4978 Alignment algorithm | Needleman-Wunsch 
    4979 Similarity matrix | BLOSUM-62 
    4980 SS fraction | 0.3 
    4981 Gap open (HH/SS/other) | 18/18/6 
    4982 Gap extend | 1 
    4983 SS matrix |  |  | H | S | O 
    4984 ---|---|---|--- 
    4985 H | 6 | -9 | -6 
    4986 S |  | 6 | -6 
    4987 O |  |  | 4 
    4988 Iteration cutoff | 2 
    4989  
    4990 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain N (#1) with C34_C-
    4991 ring_RSR158.pdb, chain N (#2), sequence alignment score = 464 
    4992 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain P (#1) with C34_C-
    4993 ring_RSR158.pdb, chain P (#2), sequence alignment score = 380.9 
    4994 Matchmaker NoDensity_PAA_apply_ncs_20.pdb, chain Q (#1) with C34_C-
    4995 ring_RSR158.pdb, chain Q (#2), sequence alignment score = 368.6 
    4996 RMSD between 247 pruned atom pairs is 0.168 angstroms; (across all 247 pairs:
    4997 0.168) 
    4998  
    4999 
    5000 > transparency #2 70 target c
    5001 
    5002 > transparency #2 90 target c
    5003 
    5004 > lighting soft
    5005 
    5006 > lighting simple
    5007 
    5008 > lighting full
    5009 
    5010 > lighting simple
    5011 
    5012 > lighting soft
    5013 
    5014 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    5015 > ring]/Figures/RAW Figures/Folds/CW_Compare_side.png" width 1477 height 1370
    5016 > supersample 3 transparentBackground true
    5017 
    5018 > turn x 90
    5019 
    5020 [Repeated 3 time(s)]
    5021 
    5022 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    5023 > ring]/Figures/RAW Figures/Folds/CW_Compare_side.png" width 1477 height 1370
    5024 > supersample 3
    5025 
    5026 > turn x 90
    5027 
    5028 > view
    5029 
    5030 > view orient
    5031 
    5032 > select add #1
    5033 
    5034 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5035 
    5036 > select subtract #1
    5037 
    5038 Nothing selected 
    5039 
    5040 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    5041 > ring]/Figures/RAW Figures/Folds/CW_Compare_top.png" width 1477 height 1370
    5042 > supersample 3
    5043 
    5044 > select :280-293
    5045 
    5046 364 atoms, 360 bonds, 56 residues, 2 models selected 
    5047 
    5048 > rainbow sel
    5049 
    5050 > select up
    5051 
    5052 444 atoms, 441 bonds, 70 residues, 2 models selected 
    5053 
    5054 > select up
    5055 
    5056 7824 atoms, 7925 bonds, 1056 residues, 2 models selected 
    5057 
    5058 > select up
    5059 
    5060 7859 atoms, 7960 bonds, 1061 residues, 2 models selected 
    5061 
    5062 > select down
    5063 
    5064 7824 atoms, 7925 bonds, 1056 residues, 2 models selected 
    5065 
    5066 > select down
    5067 
    5068 444 atoms, 441 bonds, 70 residues, 2 models selected 
    5069 
    5070 > select down
    5071 
    5072 364 atoms, 360 bonds, 56 residues, 2 models selected 
    5073 
    5074 > transparency sel 0 target c
    5075 
    5076 > select add #2
    5077 
    5078 6212 atoms, 6263 bonds, 938 residues, 2 models selected 
    5079 
    5080 > select subtract #2
    5081 
    5082 182 atoms, 180 bonds, 28 residues, 1 model selected 
    5083 
    5084 > select add #1
    5085 
    5086 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5087 
    5088 > select subtract #1
    5089 
    5090 Nothing selected 
    5091 
    5092 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    5093 > ring]/Figures/RAW Figures/Folds/CW_Compare_top.png" width 1477 height 1370
    5094 > supersample 3
    5095 
    5096 > select :3-17
    5097 
    5098 204 atoms, 202 bonds, 28 residues, 2 models selected 
    5099 
    5100 > rainbow sel
    5101 
    5102 > select up
    5103 
    5104 212 atoms, 210 bonds, 30 residues, 2 models selected 
    5105 
    5106 > select down
    5107 
    5108 204 atoms, 202 bonds, 28 residues, 2 models selected 
    5109 
    5110 > transparency sel 0 target c
    5111 
    5112 > select add #1
    5113 
    5114 6082 atoms, 6133 bonds, 913 residues, 2 models selected 
    5115 
    5116 > select add #2
    5117 
    5118 12018 atoms, 12123 bonds, 1810 residues, 2 models selected 
    5119 
    5120 > select subtract #2
    5121 
    5122 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5123 
    5124 > select subtract #1
    5125 
    5126 Nothing selected 
    5127 
    5128 > view
    5129 
    5130 > view orient
    5131 
    5132 > hide #2 models
    5133 
    5134 > cartoon style width 2.8 thickness 1.2
    5135 
    5136 > ui mousemode right select
    5137 
    5138 > select add #1/G:168
    5139 
    5140 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5141 
    5142 > select add #1/G:172
    5143 
    5144 17 atoms, 15 bonds, 2 residues, 1 model selected 
    5145 
    5146 > hide #!1 models
    5147 
    5148 > show #2 models
    5149 
    5150 > select add #1
    5151 
    5152 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5153 
    5154 > select subtract #1
    5155 
    5156 Nothing selected 
    5157 
    5158 > transparency 0 target c
    5159 
    5160 > select add #2/G:168
    5161 
    5162 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5163 
    5164 > select add #2/G:169
    5165 
    5166 16 atoms, 15 bonds, 2 residues, 1 model selected 
    5167 
    5168 > select add #2/G:170
    5169 
    5170 21 atoms, 19 bonds, 3 residues, 1 model selected 
    5171 
    5172 > select add #2/G:171
    5173 
    5174 26 atoms, 23 bonds, 4 residues, 1 model selected 
    5175 
    5176 > select subtract #2/G:168
    5177 
    5178 17 atoms, 15 bonds, 3 residues, 1 model selected 
    5179 
    5180 > hide #2 models
    5181 
    5182 > show #!1 models
    5183 
    5184 > select #1/G:172
    5185 
    5186 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5187 
    5188 > select add #1/G:168
    5189 
    5190 17 atoms, 15 bonds, 2 residues, 1 model selected 
    5191 
    5192 > show #2 models
    5193 
    5194 > hide #!1 models
    5195 
    5196 > show #!1 models
    5197 
    5198 > hide #2 models
    5199 
    5200 > ui mousemode right select
    5201 
    5202 > select add #1/G:102
    5203 
    5204 25 atoms, 22 bonds, 3 residues, 1 model selected 
    5205 
    5206 > select add #1/G:103
    5207 
    5208 32 atoms, 28 bonds, 4 residues, 1 model selected 
    5209 
    5210 > select add #1/G:105
    5211 
    5212 38 atoms, 33 bonds, 5 residues, 1 model selected 
    5213 
    5214 > select add #1/G:106
    5215 
    5216 42 atoms, 36 bonds, 6 residues, 1 model selected 
    5217 
    5218 > select add #1/G:108
    5219 
    5220 51 atoms, 44 bonds, 7 residues, 1 model selected 
    5221 
    5222 > select add #1/G:107
    5223 
    5224 59 atoms, 51 bonds, 8 residues, 1 model selected 
    5225 
    5226 > select add #1/G:109
    5227 
    5228 66 atoms, 57 bonds, 9 residues, 1 model selected 
    5229 
    5230 > select add #1/G:110
    5231 
    5232 74 atoms, 64 bonds, 10 residues, 1 model selected 
    5233 
    5234 > select add #1/G:111
    5235 
    5236 82 atoms, 71 bonds, 11 residues, 1 model selected 
    5237 
    5238 > select add #1/G:112
    5239 
    5240 93 atoms, 82 bonds, 12 residues, 1 model selected 
    5241 
    5242 > select add #1/G:113
    5243 
    5244 101 atoms, 89 bonds, 13 residues, 1 model selected 
    5245 
    5246 > select add #1/G:114
    5247 
    5248 110 atoms, 97 bonds, 14 residues, 1 model selected 
    5249 
    5250 > select add #1/G:104
    5251 
    5252 117 atoms, 103 bonds, 15 residues, 1 model selected 
    5253 
    5254 > show sel atoms
    5255 
    5256 > style sel stick
    5257 
    5258 Changed 117 atom styles 
    5259 
    5260 > color sel byelement
    5261 
    5262 > select #1/G:174
    5263 
    5264 9 atoms, 8 bonds, 1 residue, 1 model selected 
    5265 
    5266 > select add #1/G:175
    5267 
    5268 17 atoms, 15 bonds, 2 residues, 1 model selected 
    5269 
    5270 > select add #1/G:177
    5271 
    5272 26 atoms, 23 bonds, 3 residues, 1 model selected 
    5273 
    5274 > select add #1/G:178
    5275 
    5276 33 atoms, 29 bonds, 4 residues, 1 model selected 
    5277 
    5278 > select add #1/G:179
    5279 
    5280 41 atoms, 36 bonds, 5 residues, 1 model selected 
    5281 
    5282 > select add #1/G:180
    5283 
    5284 49 atoms, 43 bonds, 6 residues, 1 model selected 
    5285 
    5286 > select add #1/G:181
    5287 
    5288 53 atoms, 46 bonds, 7 residues, 1 model selected 
    5289 
    5290 > select add #1/G:182
    5291 
    5292 61 atoms, 53 bonds, 8 residues, 1 model selected 
    5293 
    5294 > select add #1/G:183
    5295 
    5296 69 atoms, 60 bonds, 9 residues, 1 model selected 
    5297 
    5298 > select add #1/G:184
    5299 
    5300 77 atoms, 67 bonds, 10 residues, 1 model selected 
    5301 
    5302 > select add #1/G:185
    5303 
    5304 81 atoms, 70 bonds, 11 residues, 1 model selected 
    5305 
    5306 > select add #1/G:187
    5307 
    5308 89 atoms, 77 bonds, 12 residues, 1 model selected 
    5309 
    5310 > select add #1/G:186
    5311 
    5312 98 atoms, 85 bonds, 13 residues, 1 model selected 
    5313 
    5314 > select add #1/G:188
    5315 
    5316 103 atoms, 89 bonds, 14 residues, 1 model selected 
    5317 
    5318 > show sel atoms
    5319 
    5320 > style sel stick
    5321 
    5322 Changed 103 atom styles 
    5323 
    5324 > color sel byelement
    5325 
    5326 > select add #1
    5327 
    5328 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5329 
    5330 > select subtract #1
    5331 
    5332 Nothing selected 
    5333 
    5334 > hide #!1 models
    5335 
    5336 > show #2 models
    5337 
    5338 > show #!1 models
    5339 
    5340 > hide #2 models
    5341 
    5342 > hide #!1 models
    5343 
    5344 > show #2 models
    5345 
    5346 > hide #2 models
    5347 
    5348 > show #!1 models
    5349 
    5350 > select #1/G:102
    5351 
    5352 8 atoms, 7 bonds, 1 residue, 1 model selected 
    5353 
    5354 > select add #1/G:121
    5355 
    5356 16 atoms, 14 bonds, 2 residues, 1 model selected 
    5357 
    5358 > ui mousemode right "tape measure"
    5359 
    5360 > marker segment #3 position 601.1,354.9,497.8 toPosition 600,351,491.7 color
    5361 > yellow radius 0.1 label 7.348 labelHeight 0.7348 labelColor yellow
    5362 
    5363 > marker segment #3 position 598,355.4,500.4 toPosition 598.6,348.1,496 color
    5364 > yellow radius 0.1 label 8.592 labelHeight 0.8592 labelColor yellow
    5365 
    5366 > marker delete #3
    5367 
    5368 > marker segment #3 position 601.1,354.9,497.8 toPosition 600,351,491.7 color
    5369 > yellow radius 0.1 label 7.348 labelHeight 0.7348 labelColor yellow
    5370 
    5371 > marker segment #3 position 598.4,351.3,502.1 toPosition 596.6,347.8,494.6
    5372 > color yellow radius 0.1 label 8.481 labelHeight 0.8481 labelColor yellow
    5373 
    5374 > marker segment #3 position 588,340.7,500.4 toPosition 595.7,337.6,504.3
    5375 > color yellow radius 0.1 label 9.2 labelHeight 0.92 labelColor yellow
    5376 
    5377 > marker segment #3 position 594.6,343.2,496.2 toPosition 598,338.5,498.6
    5378 > color yellow radius 0.1 label 6.255 labelHeight 0.6255 labelColor yellow
    5379 
    5380 > marker segment #3 position 599.2,345.1,505.3 toPosition 594.6,343.2,496.2
    5381 > color yellow radius 0.1 label 10.33 labelHeight 1.033 labelColor yellow
    5382 
    5383 > marker delete #3
    5384 
    5385 > marker segment #3 position 598.4,351.3,502.1 toPosition 596.6,347.8,494.6
    5386 > color yellow radius 0.1 label 8.481 labelHeight 0.8481 labelColor yellow
    5387 
    5388 > marker delete #3
    5389 
    5390 > marker segment #3 position 597,348.2,505.8 toPosition 597.2,343.2,499.8
    5391 > color yellow radius 0.1 label 7.829 labelHeight 0.7829 labelColor yellow
    5392 
    5393 > marker segment #3 position 598.5,355.1,501.8 toPosition 596.6,347.8,494.6
    5394 > color yellow radius 0.1 label 10.43 labelHeight 1.043 labelColor yellow
    5395 
    5396 > marker segment #3 position 601.1,354.9,497.8 toPosition 600,351,491.7 color
    5397 > yellow radius 0.1 label 7.348 labelHeight 0.7348 labelColor yellow
    5398 
    5399 > marker segment #3 position 591,343.1,500.6 toPosition 595.7,337.6,504.3
    5400 > color yellow radius 0.1 label 8.094 labelHeight 0.8094 labelColor yellow
    5401 
    5402 > marker segment #3 position 594.6,343.2,496.2 toPosition 598,338.5,498.6
    5403 > color yellow radius 0.1 label 6.255 labelHeight 0.6255 labelColor yellow
    5404 
    5405 > marker segment #3 position 596.3,342.4,507.3 toPosition 591,343.1,500.6
    5406 > color yellow radius 0.1 label 8.57 labelHeight 0.857 labelColor yellow
    5407 
    5408 > hide #!1 models
    5409 
    5410 > hide #!3 models
    5411 
    5412 > show #2 models
    5413 
    5414 > marker delete #3
    5415 
    5416 > show #!1 models
    5417 
    5418 > select add #1
    5419 
    5420 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    5421 
    5422 > select subtract #1
    5423 
    5424 Nothing selected 
    5425 
    5426 > hide #2 models
    5427 
    5428 > show #2 models
    5429 
    5430 > hide #!1 models
    5431 
    5432 > show #!1 models
    5433 
    5434 > hide #!1 models
    5435 
    5436 > show #!1 models
    5437 
    5438 > hide #!1 models
    5439 
    5440 > show #!1 models
    5441 
    5442 > hide #!1 models
    5443 
    5444 > show #!1 models
    5445 
    5446 > hide #2 models
    5447 
    5448 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    5449 > ring]/Mutations, Maps and Models/CW_C-
    5450 > ring_Phenix/ApplyNCS_15/Density_PAA_apply_ncs_15.pdb"
    5451 
    5452 Summary of feedback from opening /Users/prash_mbp/Dropbox (VU Basic
    5453 Sciences)/[FiguresOnly__C-ring]/Mutations, Maps and Models/CW_C-
    5454 ring_Phenix/ApplyNCS_15/Density_PAA_apply_ncs_15.pdb 
    5455 --- 
    5456 warnings | Ignored bad PDB record found on line 237 
    5457  
    5458  
    5459 Ignored bad PDB record found on line 2736 
    5460  
    5461  
    5462 Ignored bad PDB record found on line 4781 
    5463  
    5464  
    5465 Ignored bad PDB record found on line 5239 
    5466  
    5467  
    5468 Ignored bad PDB record found on line 5630 
    5469  
    5470  
    5471 1 messages similar to the above omitted 
    5472 Duplicate atom serial number found: 1 
    5473 Duplicate atom serial number found: 2 
    5474 Duplicate atom serial number found: 3 
    5475 Duplicate atom serial number found: 4 
    5476 Duplicate atom serial number found: 5 
    5477 229 messages similar to the above omitted 
    5478 Ignored bad PDB record found on line 6237 
    5479  
    5480  
    5481 Duplicate atom serial number found: 235 
    5482 Duplicate atom serial number found: 236 
    5483 Duplicate atom serial number found: 237 
    5484 Duplicate atom serial number found: 238 
    5485 Duplicate atom serial number found: 239 
    5486 2492 messages similar to the above omitted 
    5487 Ignored bad PDB record found on line 8736 
    5488  
    5489  
    5490 Duplicate atom serial number found: 2732 
    5491 Duplicate atom serial number found: 2733 
    5492 Duplicate atom serial number found: 2734 
    5493 Duplicate atom serial number found: 2735 
    5494 Duplicate atom serial number found: 2736 
    5495 2038 messages similar to the above omitted 
    5496 Ignored bad PDB record found on line 10781 
    5497  
    5498  
    5499 Duplicate atom serial number found: 4775 
    5500 Duplicate atom serial number found: 4776 
    5501 Duplicate atom serial number found: 4777 
    5502 Duplicate atom serial number found: 4778 
    5503 Duplicate atom serial number found: 4779 
    5504 451 messages similar to the above omitted 
    5505 Ignored bad PDB record found on line 11239 
    5506  
    5507  
    5508 Duplicate atom serial number found: 5231 
    5509 Duplicate atom serial number found: 5232 
    5510 Duplicate atom serial number found: 5233 
    5511 Duplicate atom serial number found: 5234 
    5512 Duplicate atom serial number found: 5235 
    5513 384 messages similar to the above omitted 
    5514 Ignored bad PDB record found on line 11630 
    5515  
    5516  
    5517 Duplicate atom serial number found: 5620 
    5518 Duplicate atom serial number found: 5621 
    5519 Duplicate atom serial number found: 5622 
    5520 Duplicate atom serial number found: 5623 
    5521 Duplicate atom serial number found: 5624 
    5522 364 messages similar to the above omitted 
    5523 Ignored bad PDB record found on line 12001 
    5524  
    5525  
    5526 Duplicate atom serial number found: 1 
    5527 Duplicate atom serial number found: 2 
    5528 Duplicate atom serial number found: 3 
    5529 Duplicate atom serial number found: 4 
    5530 Duplicate atom serial number found: 5 
    5531 229 messages similar to the above omitted 
    5532 Ignored bad PDB record found on line 12237 
    5533  
    5534  
    5535 Duplicate atom serial number found: 235 
    5536 Duplicate atom serial number found: 236 
    5537 Duplicate atom serial number found: 237 
    5538 Duplicate atom serial number found: 238 
    5539 Duplicate atom serial number found: 239 
    5540 2492 messages similar to the above omitted 
    5541 Ignored bad PDB record found on line 14736 
    5542  
    5543  
    5544 Duplicate atom serial number found: 2732 
    5545 Duplicate atom serial number found: 2733 
    5546 Duplicate atom serial number found: 2734 
    5547 Duplicate atom serial number found: 2735 
    5548 Duplicate atom serial number found: 2736 
    5549 2038 messages similar to the above omitted 
    5550 Ignored bad PDB record found on line 16781 
    5551  
    5552  
    5553 Duplicate atom serial number found: 4775 
    5554 Duplicate atom serial number found: 4776 
    5555 Duplicate atom serial number found: 4777 
    5556 Duplicate atom serial number found: 4778 
    5557 Duplicate atom serial number found: 4779 
    5558 451 messages similar to the above omitted 
    5559 Ignored bad PDB record found on line 17239 
    5560  
    5561  
    5562 Duplicate atom serial number found: 5231 
    5563 Duplicate atom serial number found: 5232 
    5564 Duplicate atom serial number found: 5233 
    5565 Duplicate atom serial number found: 5234 
    5566 Duplicate atom serial number found: 5235 
    5567 384 messages similar to the above omitted 
    5568 Ignored bad PDB record found on line 17630 
    5569  
    5570  
    5571 Duplicate atom serial number found: 5620 
    5572 Duplicate atom serial number found: 5621 
    5573 Duplicate atom serial number found: 5622 
    5574 Duplicate atom serial number found: 5623 
    5575 Duplicate atom serial number found: 5624 
    5576 364 messages similar to the above omitted 
    5577 Ignored bad PDB record found on line 18001 
    5578  
    5579  
    5580 Duplicate atom serial number found: 1 
    5581 Duplicate atom serial number found: 2 
    5582 Duplicate atom serial number found: 3 
    5583 Duplicate atom serial number found: 4 
    5584 Duplicate atom serial number found: 5 
    5585 229 messages similar to the above omitted 
    5586 Ignored bad PDB record found on line 18237 
    5587  
    5588  
    5589 Duplicate atom serial number found: 235 
    5590 Duplicate atom serial number found: 236 
    5591 Duplicate atom serial number found: 237 
    5592 Duplicate atom serial number found: 238 
    5593 Duplicate atom serial number found: 239 
    5594 2492 messages similar to the above omitted 
    5595 Ignored bad PDB record found on line 20736 
    5596  
    5597  
    5598 Duplicate atom serial number found: 2732 
    5599 Duplicate atom serial number found: 2733 
    5600 Duplicate atom serial number found: 2734 
    5601 Duplicate atom serial number found: 2735 
    5602 Duplicate atom serial number found: 2736 
    5603 2038 messages similar to the above omitted 
    5604 Ignored bad PDB record found on line 22781 
    5605  
    5606  
    5607 Duplicate atom serial number found: 4775 
    5608 Duplicate atom serial number found: 4776 
    5609 Duplicate atom serial number found: 4777 
    5610 Duplicate atom serial number found: 4778 
    5611 Duplicate atom serial number found: 4779 
    5612 451 messages similar to the above omitted 
    5613 Ignored bad PDB record found on line 23239 
    5614  
    5615  
    5616 Duplicate atom serial number found: 5231 
    5617 Duplicate atom serial number found: 5232 
    5618 Duplicate atom serial number found: 5233 
    5619 Duplicate atom serial number found: 5234 
    5620 Duplicate atom serial number found: 5235 
    5621 384 messages similar to the above omitted 
    5622 Ignored bad PDB record found on line 23630 
    5623  
    5624  
    5625 Duplicate atom serial number found: 5620 
    5626 Duplicate atom serial number found: 5621 
    5627 Duplicate atom serial number found: 5622 
    5628 Duplicate atom serial number found: 5623 
    5629 Duplicate atom serial number found: 5624 
    5630 364 messages similar to the above omitted 
    5631 Ignored bad PDB record found on line 24001 
    5632  
    5633  
    5634 Duplicate atom serial number found: 1 
    5635 Duplicate atom serial number found: 2 
    5636 Duplicate atom serial number found: 3 
    5637 Duplicate atom serial number found: 4 
    5638 Duplicate atom serial number found: 5 
    5639 229 messages similar to the above omitted 
    5640 Ignored bad PDB record found on line 24237 
    5641  
    5642  
    5643 Duplicate atom serial number found: 235 
    5644 Duplicate atom serial number found: 236 
    5645 Duplicate atom serial number found: 237 
    5646 Duplicate atom serial number found: 238 
    5647 Duplicate atom serial number found: 239 
    5648 2492 messages similar to the above omitted 
    5649 Ignored bad PDB record found on line 26736 
    5650  
    5651  
    5652 Duplicate atom serial number found: 2732 
    5653 Duplicate atom serial number found: 2733 
    5654 Duplicate atom serial number found: 2734 
    5655 Duplicate atom serial number found: 2735 
    5656 Duplicate atom serial number found: 2736 
    5657 2038 messages similar to the above omitted 
    5658 Ignored bad PDB record found on line 28781 
    5659  
    5660  
    5661 Duplicate atom serial number found: 4775 
    5662 Duplicate atom serial number found: 4776 
    5663 Duplicate atom serial number found: 4777 
    5664 Duplicate atom serial number found: 4778 
    5665 Duplicate atom serial number found: 4779 
    5666 451 messages similar to the above omitted 
    5667 Ignored bad PDB record found on line 29239 
    5668  
    5669  
    5670 Duplicate atom serial number found: 5231 
    5671 Duplicate atom serial number found: 5232 
    5672 Duplicate atom serial number found: 5233 
    5673 Duplicate atom serial number found: 5234 
    5674 Duplicate atom serial number found: 5235 
    5675 384 messages similar to the above omitted 
    5676 Ignored bad PDB record found on line 29630 
    5677  
    5678  
    5679 Duplicate atom serial number found: 5620 
    5680 Duplicate atom serial number found: 5621 
    5681 Duplicate atom serial number found: 5622 
    5682 Duplicate atom serial number found: 5623 
    5683 Duplicate atom serial number found: 5624 
    5684 364 messages similar to the above omitted 
    5685 Ignored bad PDB record found on line 30001 
    5686  
    5687  
    5688 Duplicate atom serial number found: 1 
    5689 Duplicate atom serial number found: 2 
    5690 Duplicate atom serial number found: 3 
    5691 Duplicate atom serial number found: 4 
    5692 Duplicate atom serial number found: 5 
    5693 229 messages similar to the above omitted 
    5694 Ignored bad PDB record found on line 30237 
    5695  
    5696  
    5697 Duplicate atom serial number found: 235 
    5698 Duplicate atom serial number found: 236 
    5699 Duplicate atom serial number found: 237 
    5700 Duplicate atom serial number found: 238 
    5701 Duplicate atom serial number found: 239 
    5702 2492 messages similar to the above omitted 
    5703 Ignored bad PDB record found on line 32736 
    5704  
    5705  
    5706 Duplicate atom serial number found: 2732 
    5707 Duplicate atom serial number found: 2733 
    5708 Duplicate atom serial number found: 2734 
    5709 Duplicate atom serial number found: 2735 
    5710 Duplicate atom serial number found: 2736 
    5711 2038 messages similar to the above omitted 
    5712 Ignored bad PDB record found on line 34781 
    5713  
    5714  
    5715 Duplicate atom serial number found: 4775 
    5716 Duplicate atom serial number found: 4776 
    5717 Duplicate atom serial number found: 4777 
    5718 Duplicate atom serial number found: 4778 
    5719 Duplicate atom serial number found: 4779 
    5720 451 messages similar to the above omitted 
    5721 Ignored bad PDB record found on line 35239 
    5722  
    5723  
    5724 Duplicate atom serial number found: 5231 
    5725 Duplicate atom serial number found: 5232 
    5726 Duplicate atom serial number found: 5233 
    5727 Duplicate atom serial number found: 5234 
    5728 Duplicate atom serial number found: 5235 
    5729 384 messages similar to the above omitted 
    5730 Ignored bad PDB record found on line 35630 
    5731  
    5732  
    5733 Duplicate atom serial number found: 5620 
    5734 Duplicate atom serial number found: 5621 
    5735 Duplicate atom serial number found: 5622 
    5736 Duplicate atom serial number found: 5623 
    5737 Duplicate atom serial number found: 5624 
    5738 364 messages similar to the above omitted 
    5739 Ignored bad PDB record found on line 36001 
    5740  
    5741  
    5742 Duplicate atom serial number found: 1 
    5743 Duplicate atom serial number found: 2 
    5744 Duplicate atom serial number found: 3 
    5745 Duplicate atom serial number found: 4 
    5746 Duplicate atom serial number found: 5 
    5747 229 messages similar to the above omitted 
    5748 Ignored bad PDB record found on line 36237 
    5749  
    5750  
    5751 Duplicate atom serial number found: 235 
    5752 Duplicate atom serial number found: 236 
    5753 Duplicate atom serial number found: 237 
    5754 Duplicate atom serial number found: 238 
    5755 Duplicate atom serial number found: 239 
    5756 2492 messages similar to the above omitted 
    5757 Ignored bad PDB record found on line 38736 
    5758  
    5759  
    5760 Duplicate atom serial number found: 2732 
    5761 Duplicate atom serial number found: 2733 
    5762 Duplicate atom serial number found: 2734 
    5763 Duplicate atom serial number found: 2735 
    5764 Duplicate atom serial number found: 2736 
    5765 2038 messages similar to the above omitted 
    5766 Ignored bad PDB record found on line 40781 
    5767  
    5768  
    5769 Duplicate atom serial number found: 4775 
    5770 Duplicate atom serial number found: 4776 
    5771 Duplicate atom serial number found: 4777 
    5772 Duplicate atom serial number found: 4778 
    5773 Duplicate atom serial number found: 4779 
    5774 451 messages similar to the above omitted 
    5775 Ignored bad PDB record found on line 41239 
    5776  
    5777  
    5778 Duplicate atom serial number found: 5231 
    5779 Duplicate atom serial number found: 5232 
    5780 Duplicate atom serial number found: 5233 
    5781 Duplicate atom serial number found: 5234 
    5782 Duplicate atom serial number found: 5235 
    5783 384 messages similar to the above omitted 
    5784 Ignored bad PDB record found on line 41630 
    5785  
    5786  
    5787 Duplicate atom serial number found: 5620 
    5788 Duplicate atom serial number found: 5621 
    5789 Duplicate atom serial number found: 5622 
    5790 Duplicate atom serial number found: 5623 
    5791 Duplicate atom serial number found: 5624 
    5792 364 messages similar to the above omitted 
    5793 Ignored bad PDB record found on line 42001 
    5794  
    5795  
    5796 Duplicate atom serial number found: 1 
    5797 Duplicate atom serial number found: 2 
    5798 Duplicate atom serial number found: 3 
    5799 Duplicate atom serial number found: 4 
    5800 Duplicate atom serial number found: 5 
    5801 229 messages similar to the above omitted 
    5802 Ignored bad PDB record found on line 42237 
    5803  
    5804  
    5805 Duplicate atom serial number found: 235 
    5806 Duplicate atom serial number found: 236 
    5807 Duplicate atom serial number found: 237 
    5808 Duplicate atom serial number found: 238 
    5809 Duplicate atom serial number found: 239 
    5810 2492 messages similar to the above omitted 
    5811 Ignored bad PDB record found on line 44736 
    5812  
    5813  
    5814 Duplicate atom serial number found: 2732 
    5815 Duplicate atom serial number found: 2733 
    5816 Duplicate atom serial number found: 2734 
    5817 Duplicate atom serial number found: 2735 
    5818 Duplicate atom serial number found: 2736 
    5819 2038 messages similar to the above omitted 
    5820 Ignored bad PDB record found on line 46781 
    5821  
    5822  
    5823 Duplicate atom serial number found: 4775 
    5824 Duplicate atom serial number found: 4776 
    5825 Duplicate atom serial number found: 4777 
    5826 Duplicate atom serial number found: 4778 
    5827 Duplicate atom serial number found: 4779 
    5828 451 messages similar to the above omitted 
    5829 Ignored bad PDB record found on line 47239 
    5830  
    5831  
    5832 Duplicate atom serial number found: 5231 
    5833 Duplicate atom serial number found: 5232 
    5834 Duplicate atom serial number found: 5233 
    5835 Duplicate atom serial number found: 5234 
    5836 Duplicate atom serial number found: 5235 
    5837 384 messages similar to the above omitted 
    5838 Ignored bad PDB record found on line 47630 
    5839  
    5840  
    5841 Duplicate atom serial number found: 5620 
    5842 Duplicate atom serial number found: 5621 
    5843 Duplicate atom serial number found: 5622 
    5844 Duplicate atom serial number found: 5623 
    5845 Duplicate atom serial number found: 5624 
    5846 364 messages similar to the above omitted 
    5847 Ignored bad PDB record found on line 48001 
    5848  
    5849  
    5850 Duplicate atom serial number found: 1 
    5851 Duplicate atom serial number found: 2 
    5852 Duplicate atom serial number found: 3 
    5853 Duplicate atom serial number found: 4 
    5854 Duplicate atom serial number found: 5 
    5855 229 messages similar to the above omitted 
    5856 Ignored bad PDB record found on line 48237 
    5857  
    5858  
    5859 Duplicate atom serial number found: 235 
    5860 Duplicate atom serial number found: 236 
    5861 Duplicate atom serial number found: 237 
    5862 Duplicate atom serial number found: 238 
    5863 Duplicate atom serial number found: 239 
    5864 2492 messages similar to the above omitted 
    5865 Ignored bad PDB record found on line 50736 
    5866  
    5867  
    5868 Duplicate atom serial number found: 2732 
    5869 Duplicate atom serial number found: 2733 
    5870 Duplicate atom serial number found: 2734 
    5871 Duplicate atom serial number found: 2735 
    5872 Duplicate atom serial number found: 2736 
    5873 2038 messages similar to the above omitted 
    5874 Ignored bad PDB record found on line 52781 
    5875  
    5876  
    5877 Duplicate atom serial number found: 4775 
    5878 Duplicate atom serial number found: 4776 
    5879 Duplicate atom serial number found: 4777 
    5880 Duplicate atom serial number found: 4778 
    5881 Duplicate atom serial number found: 4779 
    5882 451 messages similar to the above omitted 
    5883 Ignored bad PDB record found on line 53239 
    5884  
    5885  
    5886 Duplicate atom serial number found: 5231 
    5887 Duplicate atom serial number found: 5232 
    5888 Duplicate atom serial number found: 5233 
    5889 Duplicate atom serial number found: 5234 
    5890 Duplicate atom serial number found: 5235 
    5891 384 messages similar to the above omitted 
    5892 Ignored bad PDB record found on line 53630 
    5893  
    5894  
    5895 Duplicate atom serial number found: 5620 
    5896 Duplicate atom serial number found: 5621 
    5897 Duplicate atom serial number found: 5622 
    5898 Duplicate atom serial number found: 5623 
    5899 Duplicate atom serial number found: 5624 
    5900 364 messages similar to the above omitted 
    5901 Ignored bad PDB record found on line 54001 
    5902  
    5903  
    5904 Duplicate atom serial number found: 1 
    5905 Duplicate atom serial number found: 2 
    5906 Duplicate atom serial number found: 3 
    5907 Duplicate atom serial number found: 4 
    5908 Duplicate atom serial number found: 5 
    5909 229 messages similar to the above omitted 
    5910 Ignored bad PDB record found on line 54237 
    5911  
    5912  
    5913 Duplicate atom serial number found: 235 
    5914 Duplicate atom serial number found: 236 
    5915 Duplicate atom serial number found: 237 
    5916 Duplicate atom serial number found: 238 
    5917 Duplicate atom serial number found: 239 
    5918 2492 messages similar to the above omitted 
    5919 Ignored bad PDB record found on line 56736 
    5920  
    5921  
    5922 Duplicate atom serial number found: 2732 
    5923 Duplicate atom serial number found: 2733 
    5924 Duplicate atom serial number found: 2734 
    5925 Duplicate atom serial number found: 2735 
    5926 Duplicate atom serial number found: 2736 
    5927 2038 messages similar to the above omitted 
    5928 Ignored bad PDB record found on line 58781 
    5929  
    5930  
    5931 Duplicate atom serial number found: 4775 
    5932 Duplicate atom serial number found: 4776 
    5933 Duplicate atom serial number found: 4777 
    5934 Duplicate atom serial number found: 4778 
    5935 Duplicate atom serial number found: 4779 
    5936 451 messages similar to the above omitted 
    5937 Ignored bad PDB record found on line 59239 
    5938  
    5939  
    5940 Duplicate atom serial number found: 5231 
    5941 Duplicate atom serial number found: 5232 
    5942 Duplicate atom serial number found: 5233 
    5943 Duplicate atom serial number found: 5234 
    5944 Duplicate atom serial number found: 5235 
    5945 384 messages similar to the above omitted 
    5946 Ignored bad PDB record found on line 59630 
    5947  
    5948  
    5949 Duplicate atom serial number found: 5620 
    5950 Duplicate atom serial number found: 5621 
    5951 Duplicate atom serial number found: 5622 
    5952 Duplicate atom serial number found: 5623 
    5953 Duplicate atom serial number found: 5624 
    5954 364 messages similar to the above omitted 
    5955 Ignored bad PDB record found on line 60001 
    5956  
    5957  
    5958 Duplicate atom serial number found: 1 
    5959 Duplicate atom serial number found: 2 
    5960 Duplicate atom serial number found: 3 
    5961 Duplicate atom serial number found: 4 
    5962 Duplicate atom serial number found: 5 
    5963 229 messages similar to the above omitted 
    5964 Ignored bad PDB record found on line 60237 
    5965  
    5966  
    5967 Duplicate atom serial number found: 235 
    5968 Duplicate atom serial number found: 236 
    5969 Duplicate atom serial number found: 237 
    5970 Duplicate atom serial number found: 238 
    5971 Duplicate atom serial number found: 239 
    5972 2492 messages similar to the above omitted 
    5973 Ignored bad PDB record found on line 62736 
    5974  
    5975  
    5976 Duplicate atom serial number found: 2732 
    5977 Duplicate atom serial number found: 2733 
    5978 Duplicate atom serial number found: 2734 
    5979 Duplicate atom serial number found: 2735 
    5980 Duplicate atom serial number found: 2736 
    5981 2038 messages similar to the above omitted 
    5982 Ignored bad PDB record found on line 64781 
    5983  
    5984  
    5985 Duplicate atom serial number found: 4775 
    5986 Duplicate atom serial number found: 4776 
    5987 Duplicate atom serial number found: 4777 
    5988 Duplicate atom serial number found: 4778 
    5989 Duplicate atom serial number found: 4779 
    5990 451 messages similar to the above omitted 
    5991 Ignored bad PDB record found on line 65239 
    5992  
    5993  
    5994 Duplicate atom serial number found: 5231 
    5995 Duplicate atom serial number found: 5232 
    5996 Duplicate atom serial number found: 5233 
    5997 Duplicate atom serial number found: 5234 
    5998 Duplicate atom serial number found: 5235 
    5999 384 messages similar to the above omitted 
    6000 Ignored bad PDB record found on line 65630 
    6001  
    6002  
    6003 Duplicate atom serial number found: 5620 
    6004 Duplicate atom serial number found: 5621 
    6005 Duplicate atom serial number found: 5622 
    6006 Duplicate atom serial number found: 5623 
    6007 Duplicate atom serial number found: 5624 
    6008 364 messages similar to the above omitted 
    6009 Ignored bad PDB record found on line 66001 
    6010  
    6011  
    6012 Duplicate atom serial number found: 1 
    6013 Duplicate atom serial number found: 2 
    6014 Duplicate atom serial number found: 3 
    6015 Duplicate atom serial number found: 4 
    6016 Duplicate atom serial number found: 5 
    6017 229 messages similar to the above omitted 
    6018 Ignored bad PDB record found on line 66237 
    6019  
    6020  
    6021 Duplicate atom serial number found: 235 
    6022 Duplicate atom serial number found: 236 
    6023 Duplicate atom serial number found: 237 
    6024 Duplicate atom serial number found: 238 
    6025 Duplicate atom serial number found: 239 
    6026 2492 messages similar to the above omitted 
    6027 Ignored bad PDB record found on line 68736 
    6028  
    6029  
    6030 Duplicate atom serial number found: 2732 
    6031 Duplicate atom serial number found: 2733 
    6032 Duplicate atom serial number found: 2734 
    6033 Duplicate atom serial number found: 2735 
    6034 Duplicate atom serial number found: 2736 
    6035 2038 messages similar to the above omitted 
    6036 Ignored bad PDB record found on line 70781 
    6037  
    6038  
    6039 Duplicate atom serial number found: 4775 
    6040 Duplicate atom serial number found: 4776 
    6041 Duplicate atom serial number found: 4777 
    6042 Duplicate atom serial number found: 4778 
    6043 Duplicate atom serial number found: 4779 
    6044 451 messages similar to the above omitted 
    6045 Ignored bad PDB record found on line 71239 
    6046  
    6047  
    6048 Duplicate atom serial number found: 5231 
    6049 Duplicate atom serial number found: 5232 
    6050 Duplicate atom serial number found: 5233 
    6051 Duplicate atom serial number found: 5234 
    6052 Duplicate atom serial number found: 5235 
    6053 384 messages similar to the above omitted 
    6054 Ignored bad PDB record found on line 71630 
    6055  
    6056  
    6057 Duplicate atom serial number found: 5620 
    6058 Duplicate atom serial number found: 5621 
    6059 Duplicate atom serial number found: 5622 
    6060 Duplicate atom serial number found: 5623 
    6061 Duplicate atom serial number found: 5624 
    6062 364 messages similar to the above omitted 
    6063 Ignored bad PDB record found on line 72001 
    6064  
    6065  
    6066 Duplicate atom serial number found: 1 
    6067 Duplicate atom serial number found: 2 
    6068 Duplicate atom serial number found: 3 
    6069 Duplicate atom serial number found: 4 
    6070 Duplicate atom serial number found: 5 
    6071 229 messages similar to the above omitted 
    6072 Ignored bad PDB record found on line 72237 
    6073  
    6074  
    6075 Duplicate atom serial number found: 235 
    6076 Duplicate atom serial number found: 236 
    6077 Duplicate atom serial number found: 237 
    6078 Duplicate atom serial number found: 238 
    6079 Duplicate atom serial number found: 239 
    6080 2492 messages similar to the above omitted 
    6081 Ignored bad PDB record found on line 74736 
    6082  
    6083  
    6084 Duplicate atom serial number found: 2732 
    6085 Duplicate atom serial number found: 2733 
    6086 Duplicate atom serial number found: 2734 
    6087 Duplicate atom serial number found: 2735 
    6088 Duplicate atom serial number found: 2736 
    6089 2038 messages similar to the above omitted 
    6090 Ignored bad PDB record found on line 76781 
    6091  
    6092  
    6093 Duplicate atom serial number found: 4775 
    6094 Duplicate atom serial number found: 4776 
    6095 Duplicate atom serial number found: 4777 
    6096 Duplicate atom serial number found: 4778 
    6097 Duplicate atom serial number found: 4779 
    6098 451 messages similar to the above omitted 
    6099 Ignored bad PDB record found on line 77239 
    6100  
    6101  
    6102 Duplicate atom serial number found: 5231 
    6103 Duplicate atom serial number found: 5232 
    6104 Duplicate atom serial number found: 5233 
    6105 Duplicate atom serial number found: 5234 
    6106 Duplicate atom serial number found: 5235 
    6107 384 messages similar to the above omitted 
    6108 Ignored bad PDB record found on line 77630 
    6109  
    6110  
    6111 Duplicate atom serial number found: 5620 
    6112 Duplicate atom serial number found: 5621 
    6113 Duplicate atom serial number found: 5622 
    6114 Duplicate atom serial number found: 5623 
    6115 Duplicate atom serial number found: 5624 
    6116 364 messages similar to the above omitted 
    6117 Ignored bad PDB record found on line 78001 
    6118  
    6119  
    6120 Duplicate atom serial number found: 1 
    6121 Duplicate atom serial number found: 2 
    6122 Duplicate atom serial number found: 3 
    6123 Duplicate atom serial number found: 4 
    6124 Duplicate atom serial number found: 5 
    6125 229 messages similar to the above omitted 
    6126 Ignored bad PDB record found on line 78237 
    6127  
    6128  
    6129 Duplicate atom serial number found: 235 
    6130 Duplicate atom serial number found: 236 
    6131 Duplicate atom serial number found: 237 
    6132 Duplicate atom serial number found: 238 
    6133 Duplicate atom serial number found: 239 
    6134 2492 messages similar to the above omitted 
    6135 Ignored bad PDB record found on line 80736 
    6136  
    6137  
    6138 Duplicate atom serial number found: 2732 
    6139 Duplicate atom serial number found: 2733 
    6140 Duplicate atom serial number found: 2734 
    6141 Duplicate atom serial number found: 2735 
    6142 Duplicate atom serial number found: 2736 
    6143 2038 messages similar to the above omitted 
    6144 Ignored bad PDB record found on line 82781 
    6145  
    6146  
    6147 Duplicate atom serial number found: 4775 
    6148 Duplicate atom serial number found: 4776 
    6149 Duplicate atom serial number found: 4777 
    6150 Duplicate atom serial number found: 4778 
    6151 Duplicate atom serial number found: 4779 
    6152 451 messages similar to the above omitted 
    6153 Ignored bad PDB record found on line 83239 
    6154  
    6155  
    6156 Duplicate atom serial number found: 5231 
    6157 Duplicate atom serial number found: 5232 
    6158 Duplicate atom serial number found: 5233 
    6159 Duplicate atom serial number found: 5234 
    6160 Duplicate atom serial number found: 5235 
    6161 384 messages similar to the above omitted 
    6162 Ignored bad PDB record found on line 83630 
    6163  
    6164  
    6165 Duplicate atom serial number found: 5620 
    6166 Duplicate atom serial number found: 5621 
    6167 Duplicate atom serial number found: 5622 
    6168 Duplicate atom serial number found: 5623 
    6169 Duplicate atom serial number found: 5624 
    6170 364 messages similar to the above omitted 
    6171 Ignored bad PDB record found on line 84001 
    6172  
    6173  
    6174 Duplicate atom serial number found: 1 
    6175 Duplicate atom serial number found: 2 
    6176 Duplicate atom serial number found: 3 
    6177 Duplicate atom serial number found: 4 
    6178 Duplicate atom serial number found: 5 
    6179 229 messages similar to the above omitted 
    6180 Ignored bad PDB record found on line 84237 
    6181  
    6182  
    6183 Duplicate atom serial number found: 235 
    6184 Duplicate atom serial number found: 236 
    6185 Duplicate atom serial number found: 237 
    6186 Duplicate atom serial number found: 238 
    6187 Duplicate atom serial number found: 239 
    6188 2492 messages similar to the above omitted 
    6189 Ignored bad PDB record found on line 86736 
    6190  
    6191  
    6192 Duplicate atom serial number found: 2732 
    6193 Duplicate atom serial number found: 2733 
    6194 Duplicate atom serial number found: 2734 
    6195 Duplicate atom serial number found: 2735 
    6196 Duplicate atom serial number found: 2736 
    6197 2038 messages similar to the above omitted 
    6198 Ignored bad PDB record found on line 88781 
    6199  
    6200  
    6201 Duplicate atom serial number found: 4775 
    6202 Duplicate atom serial number found: 4776 
    6203 Duplicate atom serial number found: 4777 
    6204 Duplicate atom serial number found: 4778 
    6205 Duplicate atom serial number found: 4779 
    6206 451 messages similar to the above omitted 
    6207 Ignored bad PDB record found on line 89239 
    6208  
    6209  
    6210 Duplicate atom serial number found: 5231 
    6211 Duplicate atom serial number found: 5232 
    6212 Duplicate atom serial number found: 5233 
    6213 Duplicate atom serial number found: 5234 
    6214 Duplicate atom serial number found: 5235 
    6215 384 messages similar to the above omitted 
    6216 Ignored bad PDB record found on line 89630 
    6217  
    6218  
    6219 Duplicate atom serial number found: 5620 
    6220 Duplicate atom serial number found: 5621 
    6221 Duplicate atom serial number found: 5622 
    6222 Duplicate atom serial number found: 5623 
    6223 Duplicate atom serial number found: 5624 
    6224 364 messages similar to the above omitted 
    6225 Ignored bad PDB record found on line 90001 
    6226  
    6227  
    6228 Duplicate atom serial number found: 1 
    6229 Duplicate atom serial number found: 2 
    6230 Duplicate atom serial number found: 3 
    6231 Duplicate atom serial number found: 4 
    6232 Duplicate atom serial number found: 5 
    6233 229 messages similar to the above omitted 
    6234 Ignored bad PDB record found on line 90237 
    6235  
    6236  
    6237 Duplicate atom serial number found: 235 
    6238 Duplicate atom serial number found: 236 
    6239 Duplicate atom serial number found: 237 
    6240 Duplicate atom serial number found: 238 
    6241 Duplicate atom serial number found: 239 
    6242 2492 messages similar to the above omitted 
    6243 Ignored bad PDB record found on line 92736 
    6244  
    6245  
    6246 Duplicate atom serial number found: 2732 
    6247 Duplicate atom serial number found: 2733 
    6248 Duplicate atom serial number found: 2734 
    6249 Duplicate atom serial number found: 2735 
    6250 Duplicate atom serial number found: 2736 
    6251 2038 messages similar to the above omitted 
    6252 Ignored bad PDB record found on line 94781 
    6253  
    6254  
    6255 Duplicate atom serial number found: 4775 
    6256 Duplicate atom serial number found: 4776 
    6257 Duplicate atom serial number found: 4777 
    6258 Duplicate atom serial number found: 4778 
    6259 Duplicate atom serial number found: 4779 
    6260 451 messages similar to the above omitted 
    6261 Ignored bad PDB record found on line 95239 
    6262  
    6263  
    6264 Duplicate atom serial number found: 5231 
    6265 Duplicate atom serial number found: 5232 
    6266 Duplicate atom serial number found: 5233 
    6267 Duplicate atom serial number found: 5234 
    6268 Duplicate atom serial number found: 5235 
    6269 384 messages similar to the above omitted 
    6270 Ignored bad PDB record found on line 95630 
    6271  
    6272  
    6273 Duplicate atom serial number found: 5620 
    6274 Duplicate atom serial number found: 5621 
    6275 Duplicate atom serial number found: 5622 
    6276 Duplicate atom serial number found: 5623 
    6277 Duplicate atom serial number found: 5624 
    6278 364 messages similar to the above omitted 
    6279 Ignored bad PDB record found on line 96001 
    6280  
    6281  
    6282 Duplicate atom serial number found: 1 
    6283 Duplicate atom serial number found: 2 
    6284 Duplicate atom serial number found: 3 
    6285 Duplicate atom serial number found: 4 
    6286 Duplicate atom serial number found: 5 
    6287 229 messages similar to the above omitted 
    6288 Ignored bad PDB record found on line 96237 
    6289  
    6290  
    6291 Duplicate atom serial number found: 235 
    6292 Duplicate atom serial number found: 236 
    6293 Duplicate atom serial number found: 237 
    6294 Duplicate atom serial number found: 238 
    6295 Duplicate atom serial number found: 239 
    6296 2492 messages similar to the above omitted 
    6297 Ignored bad PDB record found on line 98736 
    6298  
    6299  
    6300 Duplicate atom serial number found: 2732 
    6301 Duplicate atom serial number found: 2733 
    6302 Duplicate atom serial number found: 2734 
    6303 Duplicate atom serial number found: 2735 
    6304 Duplicate atom serial number found: 2736 
    6305 2038 messages similar to the above omitted 
    6306 Ignored bad PDB record found on line 100781 
    6307  
    6308  
    6309 Duplicate atom serial number found: 4775 
    6310 Duplicate atom serial number found: 4776 
    6311 Duplicate atom serial number found: 4777 
    6312 Duplicate atom serial number found: 4778 
    6313 Duplicate atom serial number found: 4779 
    6314 451 messages similar to the above omitted 
    6315 Ignored bad PDB record found on line 101239 
    6316  
    6317  
    6318 Duplicate atom serial number found: 5231 
    6319 Duplicate atom serial number found: 5232 
    6320 Duplicate atom serial number found: 5233 
    6321 Duplicate atom serial number found: 5234 
    6322 Duplicate atom serial number found: 5235 
    6323 384 messages similar to the above omitted 
    6324 Ignored bad PDB record found on line 101630 
    6325  
    6326  
    6327 Duplicate atom serial number found: 5620 
    6328 Duplicate atom serial number found: 5621 
    6329 Duplicate atom serial number found: 5622 
    6330 Duplicate atom serial number found: 5623 
    6331 Duplicate atom serial number found: 5624 
    6332 364 messages similar to the above omitted 
    6333 Ignored bad PDB record found on line 102001 
    6334  
    6335  
    6336 Duplicate atom serial number found: 1 
    6337 Duplicate atom serial number found: 2 
    6338 Duplicate atom serial number found: 3 
    6339 Duplicate atom serial number found: 4 
    6340 Duplicate atom serial number found: 5 
    6341 229 messages similar to the above omitted 
    6342 Ignored bad PDB record found on line 102237 
    6343  
    6344  
    6345 Duplicate atom serial number found: 235 
    6346 Duplicate atom serial number found: 236 
    6347 Duplicate atom serial number found: 237 
    6348 Duplicate atom serial number found: 238 
    6349 Duplicate atom serial number found: 239 
    6350 2492 messages similar to the above omitted 
    6351 Ignored bad PDB record found on line 104736 
    6352  
    6353  
    6354 Duplicate atom serial number found: 2732 
    6355 Duplicate atom serial number found: 2733 
    6356 Duplicate atom serial number found: 2734 
    6357 Duplicate atom serial number found: 2735 
    6358 Duplicate atom serial number found: 2736 
    6359 2038 messages similar to the above omitted 
    6360 Ignored bad PDB record found on line 106781 
    6361  
    6362  
    6363 Duplicate atom serial number found: 4775 
    6364 Duplicate atom serial number found: 4776 
    6365 Duplicate atom serial number found: 4777 
    6366 Duplicate atom serial number found: 4778 
    6367 Duplicate atom serial number found: 4779 
    6368 451 messages similar to the above omitted 
    6369 Ignored bad PDB record found on line 107239 
    6370  
    6371  
    6372 Duplicate atom serial number found: 5231 
    6373 Duplicate atom serial number found: 5232 
    6374 Duplicate atom serial number found: 5233 
    6375 Duplicate atom serial number found: 5234 
    6376 Duplicate atom serial number found: 5235 
    6377 384 messages similar to the above omitted 
    6378 Ignored bad PDB record found on line 107630 
    6379  
    6380  
    6381 Duplicate atom serial number found: 5620 
    6382 Duplicate atom serial number found: 5621 
    6383 Duplicate atom serial number found: 5622 
    6384 Duplicate atom serial number found: 5623 
    6385 Duplicate atom serial number found: 5624 
    6386 364 messages similar to the above omitted 
    6387 Ignored bad PDB record found on line 108001 
    6388  
    6389  
    6390 Duplicate atom serial number found: 1 
    6391 Duplicate atom serial number found: 2 
    6392 Duplicate atom serial number found: 3 
    6393 Duplicate atom serial number found: 4 
    6394 Duplicate atom serial number found: 5 
    6395 229 messages similar to the above omitted 
    6396 Ignored bad PDB record found on line 108237 
    6397  
    6398  
    6399 Duplicate atom serial number found: 235 
    6400 Duplicate atom serial number found: 236 
    6401 Duplicate atom serial number found: 237 
    6402 Duplicate atom serial number found: 238 
    6403 Duplicate atom serial number found: 239 
    6404 2492 messages similar to the above omitted 
    6405 Ignored bad PDB record found on line 110736 
    6406  
    6407  
    6408 Duplicate atom serial number found: 2732 
    6409 Duplicate atom serial number found: 2733 
    6410 Duplicate atom serial number found: 2734 
    6411 Duplicate atom serial number found: 2735 
    6412 Duplicate atom serial number found: 2736 
    6413 2038 messages similar to the above omitted 
    6414 Ignored bad PDB record found on line 112781 
    6415  
    6416  
    6417 Duplicate atom serial number found: 4775 
    6418 Duplicate atom serial number found: 4776 
    6419 Duplicate atom serial number found: 4777 
    6420 Duplicate atom serial number found: 4778 
    6421 Duplicate atom serial number found: 4779 
    6422 451 messages similar to the above omitted 
    6423 Ignored bad PDB record found on line 113239 
    6424  
    6425  
    6426 Duplicate atom serial number found: 5231 
    6427 Duplicate atom serial number found: 5232 
    6428 Duplicate atom serial number found: 5233 
    6429 Duplicate atom serial number found: 5234 
    6430 Duplicate atom serial number found: 5235 
    6431 384 messages similar to the above omitted 
    6432 Ignored bad PDB record found on line 113630 
    6433  
    6434  
    6435 Duplicate atom serial number found: 5620 
    6436 Duplicate atom serial number found: 5621 
    6437 Duplicate atom serial number found: 5622 
    6438 Duplicate atom serial number found: 5623 
    6439 Duplicate atom serial number found: 5624 
    6440 364 messages similar to the above omitted 
    6441 Ignored bad PDB record found on line 114001 
    6442  
    6443  
    6444 Duplicate atom serial number found: 1 
    6445 Duplicate atom serial number found: 2 
    6446 Duplicate atom serial number found: 3 
    6447 Duplicate atom serial number found: 4 
    6448 Duplicate atom serial number found: 5 
    6449 229 messages similar to the above omitted 
    6450 Ignored bad PDB record found on line 114237 
    6451  
    6452  
    6453 Duplicate atom serial number found: 235 
    6454 Duplicate atom serial number found: 236 
    6455 Duplicate atom serial number found: 237 
    6456 Duplicate atom serial number found: 238 
    6457 Duplicate atom serial number found: 239 
    6458 2492 messages similar to the above omitted 
    6459 Ignored bad PDB record found on line 116736 
    6460  
    6461  
    6462 Duplicate atom serial number found: 2732 
    6463 Duplicate atom serial number found: 2733 
    6464 Duplicate atom serial number found: 2734 
    6465 Duplicate atom serial number found: 2735 
    6466 Duplicate atom serial number found: 2736 
    6467 2038 messages similar to the above omitted 
    6468 Ignored bad PDB record found on line 118781 
    6469  
    6470  
    6471 Duplicate atom serial number found: 4775 
    6472 Duplicate atom serial number found: 4776 
    6473 Duplicate atom serial number found: 4777 
    6474 Duplicate atom serial number found: 4778 
    6475 Duplicate atom serial number found: 4779 
    6476 451 messages similar to the above omitted 
    6477 Ignored bad PDB record found on line 119239 
    6478  
    6479  
    6480 Duplicate atom serial number found: 5231 
    6481 Duplicate atom serial number found: 5232 
    6482 Duplicate atom serial number found: 5233 
    6483 Duplicate atom serial number found: 5234 
    6484 Duplicate atom serial number found: 5235 
    6485 384 messages similar to the above omitted 
    6486 Ignored bad PDB record found on line 119630 
    6487  
    6488  
    6489 Duplicate atom serial number found: 5620 
    6490 Duplicate atom serial number found: 5621 
    6491 Duplicate atom serial number found: 5622 
    6492 Duplicate atom serial number found: 5623 
    6493 Duplicate atom serial number found: 5624 
    6494 364 messages similar to the above omitted 
    6495 Ignored bad PDB record found on line 120001 
    6496  
    6497  
    6498 Duplicate atom serial number found: 1 
    6499 Duplicate atom serial number found: 2 
    6500 Duplicate atom serial number found: 3 
    6501 Duplicate atom serial number found: 4 
    6502 Duplicate atom serial number found: 5 
    6503 229 messages similar to the above omitted 
    6504 Ignored bad PDB record found on line 120237 
    6505  
    6506  
    6507 Duplicate atom serial number found: 235 
    6508 Duplicate atom serial number found: 236 
    6509 Duplicate atom serial number found: 237 
    6510 Duplicate atom serial number found: 238 
    6511 Duplicate atom serial number found: 239 
    6512 2492 messages similar to the above omitted 
    6513 Ignored bad PDB record found on line 122736 
    6514  
    6515  
    6516 Duplicate atom serial number found: 2732 
    6517 Duplicate atom serial number found: 2733 
    6518 Duplicate atom serial number found: 2734 
    6519 Duplicate atom serial number found: 2735 
    6520 Duplicate atom serial number found: 2736 
    6521 2038 messages similar to the above omitted 
    6522 Ignored bad PDB record found on line 124781 
    6523  
    6524  
    6525 Duplicate atom serial number found: 4775 
    6526 Duplicate atom serial number found: 4776 
    6527 Duplicate atom serial number found: 4777 
    6528 Duplicate atom serial number found: 4778 
    6529 Duplicate atom serial number found: 4779 
    6530 451 messages similar to the above omitted 
    6531 Ignored bad PDB record found on line 125239 
    6532  
    6533  
    6534 Duplicate atom serial number found: 5231 
    6535 Duplicate atom serial number found: 5232 
    6536 Duplicate atom serial number found: 5233 
    6537 Duplicate atom serial number found: 5234 
    6538 Duplicate atom serial number found: 5235 
    6539 384 messages similar to the above omitted 
    6540 Ignored bad PDB record found on line 125630 
    6541  
    6542  
    6543 Duplicate atom serial number found: 5620 
    6544 Duplicate atom serial number found: 5621 
    6545 Duplicate atom serial number found: 5622 
    6546 Duplicate atom serial number found: 5623 
    6547 Duplicate atom serial number found: 5624 
    6548 364 messages similar to the above omitted 
    6549 Ignored bad PDB record found on line 126001 
    6550  
    6551  
    6552 Duplicate atom serial number found: 1 
    6553 Duplicate atom serial number found: 2 
    6554 Duplicate atom serial number found: 3 
    6555 Duplicate atom serial number found: 4 
    6556 Duplicate atom serial number found: 5 
    6557 229 messages similar to the above omitted 
    6558 Ignored bad PDB record found on line 126237 
    6559  
    6560  
    6561 Duplicate atom serial number found: 235 
    6562 Duplicate atom serial number found: 236 
    6563 Duplicate atom serial number found: 237 
    6564 Duplicate atom serial number found: 238 
    6565 Duplicate atom serial number found: 239 
    6566 2492 messages similar to the above omitted 
    6567 Ignored bad PDB record found on line 128736 
    6568  
    6569  
    6570 Duplicate atom serial number found: 2732 
    6571 Duplicate atom serial number found: 2733 
    6572 Duplicate atom serial number found: 2734 
    6573 Duplicate atom serial number found: 2735 
    6574 Duplicate atom serial number found: 2736 
    6575 2038 messages similar to the above omitted 
    6576 Ignored bad PDB record found on line 130781 
    6577  
    6578  
    6579 Duplicate atom serial number found: 4775 
    6580 Duplicate atom serial number found: 4776 
    6581 Duplicate atom serial number found: 4777 
    6582 Duplicate atom serial number found: 4778 
    6583 Duplicate atom serial number found: 4779 
    6584 451 messages similar to the above omitted 
    6585 Ignored bad PDB record found on line 131239 
    6586  
    6587  
    6588 Duplicate atom serial number found: 5231 
    6589 Duplicate atom serial number found: 5232 
    6590 Duplicate atom serial number found: 5233 
    6591 Duplicate atom serial number found: 5234 
    6592 Duplicate atom serial number found: 5235 
    6593 384 messages similar to the above omitted 
    6594 Ignored bad PDB record found on line 131630 
    6595  
    6596  
    6597 Duplicate atom serial number found: 5620 
    6598 Duplicate atom serial number found: 5621 
    6599 Duplicate atom serial number found: 5622 
    6600 Duplicate atom serial number found: 5623 
    6601 Duplicate atom serial number found: 5624 
    6602 364 messages similar to the above omitted 
    6603 Ignored bad PDB record found on line 132001 
    6604  
    6605  
    6606 Duplicate atom serial number found: 1 
    6607 Duplicate atom serial number found: 2 
    6608 Duplicate atom serial number found: 3 
    6609 Duplicate atom serial number found: 4 
    6610 Duplicate atom serial number found: 5 
    6611 229 messages similar to the above omitted 
    6612 Ignored bad PDB record found on line 132237 
    6613  
    6614  
    6615 Duplicate atom serial number found: 235 
    6616 Duplicate atom serial number found: 236 
    6617 Duplicate atom serial number found: 237 
    6618 Duplicate atom serial number found: 238 
    6619 Duplicate atom serial number found: 239 
    6620 2492 messages similar to the above omitted 
    6621 Ignored bad PDB record found on line 134736 
    6622  
    6623  
    6624 Duplicate atom serial number found: 2732 
    6625 Duplicate atom serial number found: 2733 
    6626 Duplicate atom serial number found: 2734 
    6627 Duplicate atom serial number found: 2735 
    6628 Duplicate atom serial number found: 2736 
    6629 2038 messages similar to the above omitted 
    6630 Ignored bad PDB record found on line 136781 
    6631  
    6632  
    6633 Duplicate atom serial number found: 4775 
    6634 Duplicate atom serial number found: 4776 
    6635 Duplicate atom serial number found: 4777 
    6636 Duplicate atom serial number found: 4778 
    6637 Duplicate atom serial number found: 4779 
    6638 451 messages similar to the above omitted 
    6639 Ignored bad PDB record found on line 137239 
    6640  
    6641  
    6642 Duplicate atom serial number found: 5231 
    6643 Duplicate atom serial number found: 5232 
    6644 Duplicate atom serial number found: 5233 
    6645 Duplicate atom serial number found: 5234 
    6646 Duplicate atom serial number found: 5235 
    6647 384 messages similar to the above omitted 
    6648 Ignored bad PDB record found on line 137630 
    6649  
    6650  
    6651 Duplicate atom serial number found: 5620 
    6652 Duplicate atom serial number found: 5621 
    6653 Duplicate atom serial number found: 5622 
    6654 Duplicate atom serial number found: 5623 
    6655 Duplicate atom serial number found: 5624 
    6656 364 messages similar to the above omitted 
    6657 Ignored bad PDB record found on line 138001 
    6658  
    6659  
    6660 Duplicate atom serial number found: 1 
    6661 Duplicate atom serial number found: 2 
    6662 Duplicate atom serial number found: 3 
    6663 Duplicate atom serial number found: 4 
    6664 Duplicate atom serial number found: 5 
    6665 229 messages similar to the above omitted 
    6666 Ignored bad PDB record found on line 138237 
    6667  
    6668  
    6669 Duplicate atom serial number found: 235 
    6670 Duplicate atom serial number found: 236 
    6671 Duplicate atom serial number found: 237 
    6672 Duplicate atom serial number found: 238 
    6673 Duplicate atom serial number found: 239 
    6674 2492 messages similar to the above omitted 
    6675 Ignored bad PDB record found on line 140736 
    6676  
    6677  
    6678 Duplicate atom serial number found: 2732 
    6679 Duplicate atom serial number found: 2733 
    6680 Duplicate atom serial number found: 2734 
    6681 Duplicate atom serial number found: 2735 
    6682 Duplicate atom serial number found: 2736 
    6683 2038 messages similar to the above omitted 
    6684 Ignored bad PDB record found on line 142781 
    6685  
    6686  
    6687 Duplicate atom serial number found: 4775 
    6688 Duplicate atom serial number found: 4776 
    6689 Duplicate atom serial number found: 4777 
    6690 Duplicate atom serial number found: 4778 
    6691 Duplicate atom serial number found: 4779 
    6692 451 messages similar to the above omitted 
    6693 Ignored bad PDB record found on line 143239 
    6694  
    6695  
    6696 Duplicate atom serial number found: 5231 
    6697 Duplicate atom serial number found: 5232 
    6698 Duplicate atom serial number found: 5233 
    6699 Duplicate atom serial number found: 5234 
    6700 Duplicate atom serial number found: 5235 
    6701 384 messages similar to the above omitted 
    6702 Ignored bad PDB record found on line 143630 
    6703  
    6704  
    6705 Duplicate atom serial number found: 5620 
    6706 Duplicate atom serial number found: 5621 
    6707 Duplicate atom serial number found: 5622 
    6708 Duplicate atom serial number found: 5623 
    6709 Duplicate atom serial number found: 5624 
    6710 364 messages similar to the above omitted 
    6711 Ignored bad PDB record found on line 144001 
    6712  
    6713  
    6714 Duplicate atom serial number found: 1 
    6715 Duplicate atom serial number found: 2 
    6716 Duplicate atom serial number found: 3 
    6717 Duplicate atom serial number found: 4 
    6718 Duplicate atom serial number found: 5 
    6719 229 messages similar to the above omitted 
    6720 Ignored bad PDB record found on line 144237 
    6721  
    6722  
    6723 Duplicate atom serial number found: 235 
    6724 Duplicate atom serial number found: 236 
    6725 Duplicate atom serial number found: 237 
    6726 Duplicate atom serial number found: 238 
    6727 Duplicate atom serial number found: 239 
    6728 2492 messages similar to the above omitted 
    6729 Ignored bad PDB record found on line 146736 
    6730  
    6731  
    6732 Duplicate atom serial number found: 2732 
    6733 Duplicate atom serial number found: 2733 
    6734 Duplicate atom serial number found: 2734 
    6735 Duplicate atom serial number found: 2735 
    6736 Duplicate atom serial number found: 2736 
    6737 2038 messages similar to the above omitted 
    6738 Ignored bad PDB record found on line 148781 
    6739  
    6740  
    6741 Duplicate atom serial number found: 4775 
    6742 Duplicate atom serial number found: 4776 
    6743 Duplicate atom serial number found: 4777 
    6744 Duplicate atom serial number found: 4778 
    6745 Duplicate atom serial number found: 4779 
    6746 451 messages similar to the above omitted 
    6747 Ignored bad PDB record found on line 149239 
    6748  
    6749  
    6750 Duplicate atom serial number found: 5231 
    6751 Duplicate atom serial number found: 5232 
    6752 Duplicate atom serial number found: 5233 
    6753 Duplicate atom serial number found: 5234 
    6754 Duplicate atom serial number found: 5235 
    6755 384 messages similar to the above omitted 
    6756 Ignored bad PDB record found on line 149630 
    6757  
    6758  
    6759 Duplicate atom serial number found: 5620 
    6760 Duplicate atom serial number found: 5621 
    6761 Duplicate atom serial number found: 5622 
    6762 Duplicate atom serial number found: 5623 
    6763 Duplicate atom serial number found: 5624 
    6764 364 messages similar to the above omitted 
    6765 Ignored bad PDB record found on line 150001 
    6766  
    6767  
    6768 Duplicate atom serial number found: 1 
    6769 Duplicate atom serial number found: 2 
    6770 Duplicate atom serial number found: 3 
    6771 Duplicate atom serial number found: 4 
    6772 Duplicate atom serial number found: 5 
    6773 229 messages similar to the above omitted 
    6774 Ignored bad PDB record found on line 150237 
    6775  
    6776  
    6777 Duplicate atom serial number found: 235 
    6778 Duplicate atom serial number found: 236 
    6779 Duplicate atom serial number found: 237 
    6780 Duplicate atom serial number found: 238 
    6781 Duplicate atom serial number found: 239 
    6782 2492 messages similar to the above omitted 
    6783 Ignored bad PDB record found on line 152736 
    6784  
    6785  
    6786 Duplicate atom serial number found: 2732 
    6787 Duplicate atom serial number found: 2733 
    6788 Duplicate atom serial number found: 2734 
    6789 Duplicate atom serial number found: 2735 
    6790 Duplicate atom serial number found: 2736 
    6791 2038 messages similar to the above omitted 
    6792 Ignored bad PDB record found on line 154781 
    6793  
    6794  
    6795 Duplicate atom serial number found: 4775 
    6796 Duplicate atom serial number found: 4776 
    6797 Duplicate atom serial number found: 4777 
    6798 Duplicate atom serial number found: 4778 
    6799 Duplicate atom serial number found: 4779 
    6800 451 messages similar to the above omitted 
    6801 Ignored bad PDB record found on line 155239 
    6802  
    6803  
    6804 Duplicate atom serial number found: 5231 
    6805 Duplicate atom serial number found: 5232 
    6806 Duplicate atom serial number found: 5233 
    6807 Duplicate atom serial number found: 5234 
    6808 Duplicate atom serial number found: 5235 
    6809 384 messages similar to the above omitted 
    6810 Ignored bad PDB record found on line 155630 
    6811  
    6812  
    6813 Duplicate atom serial number found: 5620 
    6814 Duplicate atom serial number found: 5621 
    6815 Duplicate atom serial number found: 5622 
    6816 Duplicate atom serial number found: 5623 
    6817 Duplicate atom serial number found: 5624 
    6818 364 messages similar to the above omitted 
    6819 Ignored bad PDB record found on line 156001 
    6820  
    6821  
    6822 Duplicate atom serial number found: 1 
    6823 Duplicate atom serial number found: 2 
    6824 Duplicate atom serial number found: 3 
    6825 Duplicate atom serial number found: 4 
    6826 Duplicate atom serial number found: 5 
    6827 229 messages similar to the above omitted 
    6828 Ignored bad PDB record found on line 156237 
    6829  
    6830  
    6831 Duplicate atom serial number found: 235 
    6832 Duplicate atom serial number found: 236 
    6833 Duplicate atom serial number found: 237 
    6834 Duplicate atom serial number found: 238 
    6835 Duplicate atom serial number found: 239 
    6836 2492 messages similar to the above omitted 
    6837 Ignored bad PDB record found on line 158736 
    6838  
    6839  
    6840 Duplicate atom serial number found: 2732 
    6841 Duplicate atom serial number found: 2733 
    6842 Duplicate atom serial number found: 2734 
    6843 Duplicate atom serial number found: 2735 
    6844 Duplicate atom serial number found: 2736 
    6845 2038 messages similar to the above omitted 
    6846 Ignored bad PDB record found on line 160781 
    6847  
    6848  
    6849 Duplicate atom serial number found: 4775 
    6850 Duplicate atom serial number found: 4776 
    6851 Duplicate atom serial number found: 4777 
    6852 Duplicate atom serial number found: 4778 
    6853 Duplicate atom serial number found: 4779 
    6854 451 messages similar to the above omitted 
    6855 Ignored bad PDB record found on line 161239 
    6856  
    6857  
    6858 Duplicate atom serial number found: 5231 
    6859 Duplicate atom serial number found: 5232 
    6860 Duplicate atom serial number found: 5233 
    6861 Duplicate atom serial number found: 5234 
    6862 Duplicate atom serial number found: 5235 
    6863 384 messages similar to the above omitted 
    6864 Ignored bad PDB record found on line 161630 
    6865  
    6866  
    6867 Duplicate atom serial number found: 5620 
    6868 Duplicate atom serial number found: 5621 
    6869 Duplicate atom serial number found: 5622 
    6870 Duplicate atom serial number found: 5623 
    6871 Duplicate atom serial number found: 5624 
    6872 364 messages similar to the above omitted 
    6873 Ignored bad PDB record found on line 162001 
    6874  
    6875  
    6876 Duplicate atom serial number found: 1 
    6877 Duplicate atom serial number found: 2 
    6878 Duplicate atom serial number found: 3 
    6879 Duplicate atom serial number found: 4 
    6880 Duplicate atom serial number found: 5 
    6881 229 messages similar to the above omitted 
    6882 Ignored bad PDB record found on line 162237 
    6883  
    6884  
    6885 Duplicate atom serial number found: 235 
    6886 Duplicate atom serial number found: 236 
    6887 Duplicate atom serial number found: 237 
    6888 Duplicate atom serial number found: 238 
    6889 Duplicate atom serial number found: 239 
    6890 2492 messages similar to the above omitted 
    6891 Ignored bad PDB record found on line 164736 
    6892  
    6893  
    6894 Duplicate atom serial number found: 2732 
    6895 Duplicate atom serial number found: 2733 
    6896 Duplicate atom serial number found: 2734 
    6897 Duplicate atom serial number found: 2735 
    6898 Duplicate atom serial number found: 2736 
    6899 2038 messages similar to the above omitted 
    6900 Ignored bad PDB record found on line 166781 
    6901  
    6902  
    6903 Duplicate atom serial number found: 4775 
    6904 Duplicate atom serial number found: 4776 
    6905 Duplicate atom serial number found: 4777 
    6906 Duplicate atom serial number found: 4778 
    6907 Duplicate atom serial number found: 4779 
    6908 451 messages similar to the above omitted 
    6909 Ignored bad PDB record found on line 167239 
    6910  
    6911  
    6912 Duplicate atom serial number found: 5231 
    6913 Duplicate atom serial number found: 5232 
    6914 Duplicate atom serial number found: 5233 
    6915 Duplicate atom serial number found: 5234 
    6916 Duplicate atom serial number found: 5235 
    6917 384 messages similar to the above omitted 
    6918 Ignored bad PDB record found on line 167630 
    6919  
    6920  
    6921 Duplicate atom serial number found: 5620 
    6922 Duplicate atom serial number found: 5621 
    6923 Duplicate atom serial number found: 5622 
    6924 Duplicate atom serial number found: 5623 
    6925 Duplicate atom serial number found: 5624 
    6926 364 messages similar to the above omitted 
    6927 Ignored bad PDB record found on line 168001 
    6928  
    6929  
    6930 Duplicate atom serial number found: 1 
    6931 Duplicate atom serial number found: 2 
    6932 Duplicate atom serial number found: 3 
    6933 Duplicate atom serial number found: 4 
    6934 Duplicate atom serial number found: 5 
    6935 229 messages similar to the above omitted 
    6936 Ignored bad PDB record found on line 168237 
    6937  
    6938  
    6939 Duplicate atom serial number found: 235 
    6940 Duplicate atom serial number found: 236 
    6941 Duplicate atom serial number found: 237 
    6942 Duplicate atom serial number found: 238 
    6943 Duplicate atom serial number found: 239 
    6944 2492 messages similar to the above omitted 
    6945 Ignored bad PDB record found on line 170736 
    6946  
    6947  
    6948 Duplicate atom serial number found: 2732 
    6949 Duplicate atom serial number found: 2733 
    6950 Duplicate atom serial number found: 2734 
    6951 Duplicate atom serial number found: 2735 
    6952 Duplicate atom serial number found: 2736 
    6953 2038 messages similar to the above omitted 
    6954 Ignored bad PDB record found on line 172781 
    6955  
    6956  
    6957 Duplicate atom serial number found: 4775 
    6958 Duplicate atom serial number found: 4776 
    6959 Duplicate atom serial number found: 4777 
    6960 Duplicate atom serial number found: 4778 
    6961 Duplicate atom serial number found: 4779 
    6962 451 messages similar to the above omitted 
    6963 Ignored bad PDB record found on line 173239 
    6964  
    6965  
    6966 Duplicate atom serial number found: 5231 
    6967 Duplicate atom serial number found: 5232 
    6968 Duplicate atom serial number found: 5233 
    6969 Duplicate atom serial number found: 5234 
    6970 Duplicate atom serial number found: 5235 
    6971 384 messages similar to the above omitted 
    6972 Ignored bad PDB record found on line 173630 
    6973  
    6974  
    6975 Duplicate atom serial number found: 5620 
    6976 Duplicate atom serial number found: 5621 
    6977 Duplicate atom serial number found: 5622 
    6978 Duplicate atom serial number found: 5623 
    6979 Duplicate atom serial number found: 5624 
    6980 364 messages similar to the above omitted 
    6981 Ignored bad PDB record found on line 174001 
    6982  
    6983  
    6984 Duplicate atom serial number found: 1 
    6985 Duplicate atom serial number found: 2 
    6986 Duplicate atom serial number found: 3 
    6987 Duplicate atom serial number found: 4 
    6988 Duplicate atom serial number found: 5 
    6989 229 messages similar to the above omitted 
    6990 Ignored bad PDB record found on line 174237 
    6991  
    6992  
    6993 Duplicate atom serial number found: 235 
    6994 Duplicate atom serial number found: 236 
    6995 Duplicate atom serial number found: 237 
    6996 Duplicate atom serial number found: 238 
    6997 Duplicate atom serial number found: 239 
    6998 2492 messages similar to the above omitted 
    6999 Ignored bad PDB record found on line 176736 
    7000  
    7001  
    7002 Duplicate atom serial number found: 2732 
    7003 Duplicate atom serial number found: 2733 
    7004 Duplicate atom serial number found: 2734 
    7005 Duplicate atom serial number found: 2735 
    7006 Duplicate atom serial number found: 2736 
    7007 2038 messages similar to the above omitted 
    7008 Ignored bad PDB record found on line 178781 
    7009  
    7010  
    7011 Duplicate atom serial number found: 4775 
    7012 Duplicate atom serial number found: 4776 
    7013 Duplicate atom serial number found: 4777 
    7014 Duplicate atom serial number found: 4778 
    7015 Duplicate atom serial number found: 4779 
    7016 451 messages similar to the above omitted 
    7017 Ignored bad PDB record found on line 179239 
    7018  
    7019  
    7020 Duplicate atom serial number found: 5231 
    7021 Duplicate atom serial number found: 5232 
    7022 Duplicate atom serial number found: 5233 
    7023 Duplicate atom serial number found: 5234 
    7024 Duplicate atom serial number found: 5235 
    7025 384 messages similar to the above omitted 
    7026 Ignored bad PDB record found on line 179630 
    7027  
    7028  
    7029 Duplicate atom serial number found: 5620 
    7030 Duplicate atom serial number found: 5621 
    7031 Duplicate atom serial number found: 5622 
    7032 Duplicate atom serial number found: 5623 
    7033 Duplicate atom serial number found: 5624 
    7034 364 messages similar to the above omitted 
    7035 Ignored bad PDB record found on line 180001 
    7036  
    7037  
    7038 Duplicate atom serial number found: 1 
    7039 Duplicate atom serial number found: 2 
    7040 Duplicate atom serial number found: 3 
    7041 Duplicate atom serial number found: 4 
    7042 Duplicate atom serial number found: 5 
    7043 229 messages similar to the above omitted 
    7044 Ignored bad PDB record found on line 180237 
    7045  
    7046  
    7047 Duplicate atom serial number found: 235 
    7048 Duplicate atom serial number found: 236 
    7049 Duplicate atom serial number found: 237 
    7050 Duplicate atom serial number found: 238 
    7051 Duplicate atom serial number found: 239 
    7052 2492 messages similar to the above omitted 
    7053 Ignored bad PDB record found on line 182736 
    7054  
    7055  
    7056 Duplicate atom serial number found: 2732 
    7057 Duplicate atom serial number found: 2733 
    7058 Duplicate atom serial number found: 2734 
    7059 Duplicate atom serial number found: 2735 
    7060 Duplicate atom serial number found: 2736 
    7061 2038 messages similar to the above omitted 
    7062 Ignored bad PDB record found on line 184781 
    7063  
    7064  
    7065 Duplicate atom serial number found: 4775 
    7066 Duplicate atom serial number found: 4776 
    7067 Duplicate atom serial number found: 4777 
    7068 Duplicate atom serial number found: 4778 
    7069 Duplicate atom serial number found: 4779 
    7070 451 messages similar to the above omitted 
    7071 Ignored bad PDB record found on line 185239 
    7072  
    7073  
    7074 Duplicate atom serial number found: 5231 
    7075 Duplicate atom serial number found: 5232 
    7076 Duplicate atom serial number found: 5233 
    7077 Duplicate atom serial number found: 5234 
    7078 Duplicate atom serial number found: 5235 
    7079 384 messages similar to the above omitted 
    7080 Ignored bad PDB record found on line 185630 
    7081  
    7082  
    7083 Duplicate atom serial number found: 5620 
    7084 Duplicate atom serial number found: 5621 
    7085 Duplicate atom serial number found: 5622 
    7086 Duplicate atom serial number found: 5623 
    7087 Duplicate atom serial number found: 5624 
    7088 364 messages similar to the above omitted 
    7089 Ignored bad PDB record found on line 186001 
    7090  
    7091  
    7092 Duplicate atom serial number found: 1 
    7093 Duplicate atom serial number found: 2 
    7094 Duplicate atom serial number found: 3 
    7095 Duplicate atom serial number found: 4 
    7096 Duplicate atom serial number found: 5 
    7097 229 messages similar to the above omitted 
    7098 Ignored bad PDB record found on line 186237 
    7099  
    7100  
    7101 Duplicate atom serial number found: 235 
    7102 Duplicate atom serial number found: 236 
    7103 Duplicate atom serial number found: 237 
    7104 Duplicate atom serial number found: 238 
    7105 Duplicate atom serial number found: 239 
    7106 2492 messages similar to the above omitted 
    7107 Ignored bad PDB record found on line 188736 
    7108  
    7109  
    7110 Duplicate atom serial number found: 2732 
    7111 Duplicate atom serial number found: 2733 
    7112 Duplicate atom serial number found: 2734 
    7113 Duplicate atom serial number found: 2735 
    7114 Duplicate atom serial number found: 2736 
    7115 2038 messages similar to the above omitted 
    7116 Ignored bad PDB record found on line 190781 
    7117  
    7118  
    7119 Duplicate atom serial number found: 4775 
    7120 Duplicate atom serial number found: 4776 
    7121 Duplicate atom serial number found: 4777 
    7122 Duplicate atom serial number found: 4778 
    7123 Duplicate atom serial number found: 4779 
    7124 451 messages similar to the above omitted 
    7125 Ignored bad PDB record found on line 191239 
    7126  
    7127  
    7128 Duplicate atom serial number found: 5231 
    7129 Duplicate atom serial number found: 5232 
    7130 Duplicate atom serial number found: 5233 
    7131 Duplicate atom serial number found: 5234 
    7132 Duplicate atom serial number found: 5235 
    7133 384 messages similar to the above omitted 
    7134 Ignored bad PDB record found on line 191630 
    7135  
    7136  
    7137 Duplicate atom serial number found: 5620 
    7138 Duplicate atom serial number found: 5621 
    7139 Duplicate atom serial number found: 5622 
    7140 Duplicate atom serial number found: 5623 
    7141 Duplicate atom serial number found: 5624 
    7142 364 messages similar to the above omitted 
    7143 Ignored bad PDB record found on line 192001 
    7144  
    7145  
    7146 Duplicate atom serial number found: 1 
    7147 Duplicate atom serial number found: 2 
    7148 Duplicate atom serial number found: 3 
    7149 Duplicate atom serial number found: 4 
    7150 Duplicate atom serial number found: 5 
    7151 229 messages similar to the above omitted 
    7152 Ignored bad PDB record found on line 192237 
    7153  
    7154  
    7155 Duplicate atom serial number found: 235 
    7156 Duplicate atom serial number found: 236 
    7157 Duplicate atom serial number found: 237 
    7158 Duplicate atom serial number found: 238 
    7159 Duplicate atom serial number found: 239 
    7160 2492 messages similar to the above omitted 
    7161 Ignored bad PDB record found on line 194736 
    7162  
    7163  
    7164 Duplicate atom serial number found: 2732 
    7165 Duplicate atom serial number found: 2733 
    7166 Duplicate atom serial number found: 2734 
    7167 Duplicate atom serial number found: 2735 
    7168 Duplicate atom serial number found: 2736 
    7169 2038 messages similar to the above omitted 
    7170 Ignored bad PDB record found on line 196781 
    7171  
    7172  
    7173 Duplicate atom serial number found: 4775 
    7174 Duplicate atom serial number found: 4776 
    7175 Duplicate atom serial number found: 4777 
    7176 Duplicate atom serial number found: 4778 
    7177 Duplicate atom serial number found: 4779 
    7178 451 messages similar to the above omitted 
    7179 Ignored bad PDB record found on line 197239 
    7180  
    7181  
    7182 Duplicate atom serial number found: 5231 
    7183 Duplicate atom serial number found: 5232 
    7184 Duplicate atom serial number found: 5233 
    7185 Duplicate atom serial number found: 5234 
    7186 Duplicate atom serial number found: 5235 
    7187 384 messages similar to the above omitted 
    7188 Ignored bad PDB record found on line 197630 
    7189  
    7190  
    7191 Duplicate atom serial number found: 5620 
    7192 Duplicate atom serial number found: 5621 
    7193 Duplicate atom serial number found: 5622 
    7194 Duplicate atom serial number found: 5623 
    7195 Duplicate atom serial number found: 5624 
    7196 364 messages similar to the above omitted 
    7197 Ignored bad PDB record found on line 198001 
    7198  
    7199  
    7200 Duplicate atom serial number found: 1 
    7201 Duplicate atom serial number found: 2 
    7202 Duplicate atom serial number found: 3 
    7203 Duplicate atom serial number found: 4 
    7204 Duplicate atom serial number found: 5 
    7205 229 messages similar to the above omitted 
    7206 Ignored bad PDB record found on line 198237 
    7207  
    7208  
    7209 Duplicate atom serial number found: 235 
    7210 Duplicate atom serial number found: 236 
    7211 Duplicate atom serial number found: 237 
    7212 Duplicate atom serial number found: 238 
    7213 Duplicate atom serial number found: 239 
    7214 2492 messages similar to the above omitted 
    7215 Ignored bad PDB record found on line 200736 
    7216  
    7217  
    7218 Duplicate atom serial number found: 2732 
    7219 Duplicate atom serial number found: 2733 
    7220 Duplicate atom serial number found: 2734 
    7221 Duplicate atom serial number found: 2735 
    7222 Duplicate atom serial number found: 2736 
    7223 2038 messages similar to the above omitted 
    7224 Ignored bad PDB record found on line 202781 
    7225  
    7226  
    7227 Duplicate atom serial number found: 4775 
    7228 Duplicate atom serial number found: 4776 
    7229 Duplicate atom serial number found: 4777 
    7230 Duplicate atom serial number found: 4778 
    7231 Duplicate atom serial number found: 4779 
    7232 451 messages similar to the above omitted 
    7233 Ignored bad PDB record found on line 203239 
    7234  
    7235  
    7236 Duplicate atom serial number found: 5231 
    7237 Duplicate atom serial number found: 5232 
    7238 Duplicate atom serial number found: 5233 
    7239 Duplicate atom serial number found: 5234 
    7240 Duplicate atom serial number found: 5235 
    7241 384 messages similar to the above omitted 
    7242 Ignored bad PDB record found on line 203630 
    7243  
    7244  
    7245 Duplicate atom serial number found: 5620 
    7246 Duplicate atom serial number found: 5621 
    7247 Duplicate atom serial number found: 5622 
    7248 Duplicate atom serial number found: 5623 
    7249 Duplicate atom serial number found: 5624 
    7250 364 messages similar to the above omitted 
    7251 Ignored bad PDB record found on line 204001 
    7252  
    7253  
    7254 Ignored bad PDB record found on line 204002 
    7255  
    7256 Chain information for Density_PAA_apply_ncs_15.pdb #3 
    7257 --- 
    7258 Chain | Description 
    7259 A BC BF DB DE F FA FD FG HC HF I JB JE LA LD LG NC NF PB PE RA RD RG S TC TF
    7260 VB VE XA XD Z ZC ZF | No description available 
    7261 AA AD AG B CC CF EB EE G GA GD GG IC IF J KB KE MA MD MG OC OF QB QE SA SD SG
    7262 T UC UF WB WE YA YD | No description available 
    7263 AB AE CA CD CG D EC EF GB GE IA ID IG KC KF L MB ME N OA OD OG QC QF SB SE UA
    7264 UD UG W WC WF YB YE | No description available 
    7265 AC AF CB CE EA ED EG GC GF H IB IE KA KD KG MC MF OB OE Q QA QD QG R SC SF UB
    7266 UE WA WD WG Y YC YF | No description available 
    7267 BA BD BG C DC DF FB FE HA HD HG JC JF K LB LE M NA ND NG PC PF RB RE TA TD TG
    7268 V VC VF XB XE ZA ZD | No description available 
    7269 BB BE DA DD DG E FC FF HB HE JA JD JG LC LF NB NE O P PA PD PG RC RF TB TE VA
    7270 VD VG X XC XF ZB ZE | No description available 
    7271  
    7272 
    7273 > hide #!1 models
    7274 
    7275 > select add #3
    7276 
    7277 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    7278 
    7279 > show sel cartoons
    7280 
    7281 > hide sel atoms
    7282 
    7283 > cartoon style width 2.8 thickness 1.2
    7284 
    7285 > select subtract #3
    7286 
    7287 Nothing selected 
    7288 
    7289 > show #!1 models
    7290 
    7291 > hide #!1 models
    7292 
    7293 > show #!1 models
    7294 
    7295 > hide #!1 models
    7296 
    7297 > show #2 models
    7298 
    7299 > hide #2 models
    7300 
    7301 > select
    7302 > /A,BC,BF,DB,DE,F-FA,FD,FG,HC,HF,I,JB,JE,LA,LD,LG,NC,NF,PB,PE,RA,RD,RG-S,TC,TF,VB,VE,XA,XD,Z,ZC,ZF
    7303 
    7304 8424 atoms, 8388 bonds, 1692 residues, 3 models selected 
    7305 
    7306 > color sel #0f98f7ff
    7307 
    7308 > select
    7309 > /AA,AD,AG-B,CC,CF,EB,EE,G-GA,GD,GG,IC,IF,J,KB,KE,MA,MD,MG,OC,OF,QB,QE,SA,SD,SG-T,UC,UF,WB,WE,YA,YD
    7310 
    7311 89891 atoms, 90541 bonds, 11485 residues, 3 models selected 
    7312 
    7313 > color sel #ed271dff
    7314 
    7315 > select
    7316 > /BA,BD,BG-C,DC,DF,FB,FE,HA,HD,HG,JC,JF,K,LB,LE,M,NA,ND,NG,PC,PF,RB,RE,TA,TD,TG,V,VC,VF,XB,XE,ZA,ZD
    7317 
    7318 73591 atoms, 74958 bonds, 10341 residues, 3 models selected 
    7319 
    7320 > color sel #ffb60aff
    7321 
    7322 > select
    7323 > /AB,AE,CA,CD,CG-D,EC,EF,GB,GE,IA,ID,IG,KC,KF,L,MB,ME,N,OA,OD,OG,QC,QF,SB,SE,UA,UD,UG,W,WC,WF,YB,YE
    7324 
    7325 16416 atoms, 16380 bonds, 3348 residues, 3 models selected 
    7326 
    7327 > color sel #8c15b7ff
    7328 
    7329 > select
    7330 > /AC,AF,CB,CE,EA,ED,EG,GC,GF,H,IB,IE,KA,KD,KG,MC,MF,OB,OE,Q-QA,QD,QG-R,SC,SF,UB,UE,WA,WD,WG,Y,YC,YF
    7331 
    7332 13284 atoms, 13248 bonds, 2700 residues, 3 models selected 
    7333 
    7334 > color sel #b581c5ff
    7335 
    7336 > select
    7337 > /BB,BE,DA,DD,DG-E,FC,FF,HB,HE,JA,JD,JG,LC,LF,NB,NE,O,P-PA,PD,PG,RC,RF,TB,TE,VA,VD,VG,X,XC,XF,ZB,ZE
    7338 
    7339 14004 atoms, 13968 bonds, 2844 residues, 3 models selected 
    7340 
    7341 > color sel #dc4166ff
    7342 
    7343 > select add #3
    7344 
    7345 204370 atoms, 206136 bonds, 30758 residues, 3 models selected 
    7346 
    7347 > select subtract #3
    7348 
    7349 778 atoms, 776 bonds, 158 residues, 2 models selected 
    7350 
    7351 > select add #2
    7352 
    7353 6419 atoms, 6471 bonds, 989 residues, 2 models selected 
    7354 
    7355 > select add #1
    7356 
    7357 12018 atoms, 12123 bonds, 1810 residues, 2 models selected 
    7358 
    7359 > select subtract #1
    7360 
    7361 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    7362 
    7363 > select subtract #2
    7364 
    7365 Nothing selected 
    7366 
    7367 > view orient
    7368 
    7369 > select add #3
    7370 
    7371 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    7372 
    7373 > show sel surfaces
    7374 
    7375 > hide sel cartoons
    7376 
    7377 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7378 > ring]/Mutations, Maps and Models/PAA/MSC_PAA_C34_LocalRef_Aligned.mrc"
    7379 
    7380 Opened MSC_PAA_C34_LocalRef_Aligned.mrc as #4, grid size 512,512,512, pixel
    7381 2.05, shown at level 0.0679, step 2, values float32 
    7382 
    7383 > volume #4 step 1
    7384 
    7385 > volume #4 level 0.158
    7386 
    7387 > show sel cartoons
    7388 
    7389 > hide sel surfaces
    7390 
    7391 > color #4 #b2b2b283 models
    7392 
    7393 > color #4 #b2b2b25a models
    7394 
    7395 > select subtract #3
    7396 
    7397 204 models selected 
    7398 
    7399 > select add #3
    7400 
    7401 203592 atoms, 205360 bonds, 30600 residues, 1 model selected 
    7402 
    7403 > volume #4 level 0.1914
    7404 
    7405 > color #4 #b2b2b2e7 models
    7406 
    7407 > select /f/g/m/n/p/q
    7408 
    7409 18006 atoms, 18163 bonds, 2710 residues, 3 models selected 
    7410 
    7411 > select subtract #1
    7412 
    7413 12018 atoms, 12123 bonds, 1810 residues, 8 models selected 
    7414 
    7415 > select subtract #2
    7416 
    7417 5988 atoms, 6040 bonds, 900 residues, 7 models selected 
    7418 
    7419 > select ~sel & ##selected
    7420 
    7421 197604 atoms, 199320 bonds, 29700 residues, 1 model selected 
    7422 
    7423 > delete sel
    7424 
    7425 > ui tool show "Map Filter"
    7426 
    7427 > volume gaussian #4 sDev 10
    7428 
    7429 Opened MSC_PAA_C34_LocalRef_Aligned.mrc gaussian as #5, grid size 512,512,512,
    7430 pixel 2.05, shown at step 1, values float32 
    7431 
    7432 > color #5 #929292ff models
    7433 
    7434 > color #5 darkgrey models
    7435 
    7436 > color #5 silver models
    7437 
    7438 > color #5 #c0c0c05a models
    7439 
    7440 > color #5 #c0c0c080 models
    7441 
    7442 > color #5 darkgrey models
    7443 
    7444 > color #5 #929292ff models
    7445 
    7446 > volume #5 level 0.1708
    7447 
    7448 > volume gaussian #4 sDev 5 modelId #5
    7449 
    7450 Opened MSC_PAA_C34_LocalRef_Aligned.mrc gaussian as #5, grid size 512,512,512,
    7451 pixel 2.05, shown at step 1, values float32 
    7452 
    7453 > volume #5 level 0.175
    7454 
    7455 > color #5 #92929287 models
    7456 
    7457 > volume #5 level 0.1687
    7458 
    7459 > show #!4 models
    7460 
    7461 > hide #!5 models
    7462 
    7463 > color zone #4 near #3 distance 12.3
    7464 
    7465 > color zone #4 near #3 distance 6
    7466 
    7467 > color #4 #b2b2b2d4 models
    7468 
    7469 > color #4 #b2b2b2d9 models
    7470 
    7471 > color zone #4 near #3 distance 6
    7472 
    7473 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7474 > ring]/EMDB and PDB Upload/C-ring/34-mer C-ring/C34-J412_Z-flip.mrc"
    7475 
    7476 Opened C34-J412_Z-flip.mrc as #6, grid size 768,768,768, pixel 1.36, shown at
    7477 step 1, values float32 
    7478 
    7479 > volume #6 region 0,0,0,767,767,767 step 4
    7480 
    7481 [Repeated 1 time(s)]
    7482 
    7483 > volume #6 step 1
    7484 
    7485 > show #2 models
    7486 
    7487 > volume #6 change image level -0.01815,0 level 0.2025,0.8 level 0.2592,1
    7488 
    7489 > volume #6 level 0.1798
    7490 
    7491 > select add #2
    7492 
    7493 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    7494 
    7495 > select subtract #2
    7496 
    7497 Nothing selected 
    7498 
    7499 > select add #6
    7500 
    7501 3 models selected 
    7502 
    7503 > marker segment #7 position 410.3,327,615.9 toPosition 415.1,334.4,608.8
    7504 > color yellow radius 0.3408 label 11.29 labelHeight 1.129 labelColor yellow
    7505 
    7506 > ui mousemode right "translate selected models"
    7507 
    7508 > view matrix models
    7509 > #6,0.9918,0.12692,0.015128,-70.914,0.12648,-0.99159,0.027518,960.48,0.018493,-0.025379,-0.99951,1161.7
    7510 
    7511 > view matrix models
    7512 > #6,0.9918,0.12692,0.015128,-66.195,0.12648,-0.99159,0.027518,968.82,0.018493,-0.025379,-0.99951,1065.8
    7513 
    7514 > view matrix models
    7515 > #6,0.9918,0.12692,0.015128,-69.136,0.12648,-0.99159,0.027518,962.93,0.018493,-0.025379,-0.99951,1065.8
    7516 
    7517 > hide #!3 models
    7518 
    7519 > hide #!4 models
    7520 
    7521 > color #6 darkgrey models
    7522 
    7523 > color #6 silver models
    7524 
    7525 > color #6 #d6d6d6ff models
    7526 
    7527 > color #6 silver models
    7528 
    7529 > select add #6
    7530 
    7531 3 models selected 
    7532 
    7533 > select add #6
    7534 
    7535 3 models selected 
    7536 
    7537 > select #2
    7538 
    7539 6030 atoms, 6083 bonds, 910 residues, 1 model selected 
    7540 
    7541 > view matrix models
    7542 > #2,0.49084,0.8559,0.16285,-354.78,0.86001,-0.44604,-0.24787,459.4,-0.13952,0.26171,-0.95501,901.43
    7543 
    7544 > view matrix models
    7545 > #2,0.49084,0.8559,0.16285,-351.77,0.86001,-0.44604,-0.24787,448.38,-0.13952,0.26171,-0.95501,900.76
    7546 
    7547 > view matrix models
    7548 > #2,0.49084,0.8559,0.16285,-349.29,0.86001,-0.44604,-0.24787,447.79,-0.13952,0.26171,-0.95501,900.08
    7549 
    7550 > ui tool show "Fit in Map"
    7551 
    7552 > fitmap #2 inMap #6
    7553 
    7554 Fit molecule C34_C-ring_RSR158.pdb (#2) to map C34-J412_Z-flip.mrc (#6) using
    7555 6030 atoms 
    7556 average map value = 0.219, steps = 220 
    7557 shifted from previous position = 17.3 
    7558 rotated from previous position = 29.5 degrees 
    7559 atoms outside contour = 1805, contour level = 0.17975 
    7560  
    7561 Position of C34_C-ring_RSR158.pdb (#2) relative to C34-J412_Z-flip.mrc (#6)
    7562 coordinates: 
    7563 Matrix rotation and translation 
    7564 0.85696066 0.51538035 0.00122505 -192.98091340 
    7565 -0.51537982 0.85696154 -0.00074261 345.49483695 
    7566 -0.00143255 0.00000502 0.99999897 0.58780516 
    7567 Axis 0.00072532 0.00257828 -0.99999641 
    7568 Axis point 525.93340949 520.41214092 0.00000000 
    7569 Rotation angle (degrees) 31.02298771 
    7570 Shift along axis 0.16300864 
    7571  
    7572 
    7573 > close #7
    7574 
    7575 > volume gaussian #6 sDev 5
    7576 
    7577 Opened C34-J412_Z-flip.mrc gaussian as #7, grid size 768,768,768, pixel 1.36,
    7578 shown at step 1, values float32 
    7579 
    7580 > volume #7 level 0.1316
    7581 
    7582 > color #7 silver models
    7583 
    7584 > color zone #7 near #2 distance 6
    7585 
    7586 > show #!4 models
    7587 
    7588 > hide #!7 models
    7589 
    7590 > show #!7 models
    7591 
    7592 > hide #2 models
    7593 
    7594 > select subtract #2
    7595 
    7596 Nothing selected 
    7597 
    7598 > hide #!4 models
    7599 
    7600 > show #!4 models
    7601 
    7602 > hide #!7 models
    7603 
    7604 > show #!7 models
    7605 
    7606 > show #!5 models
    7607 
    7608 > hide #!4 models
    7609 
    7610 > hide #!7 models
    7611 
    7612 > color zone #5 near #3 distance 6
    7613 
    7614 > show #!7 models
    7615 
    7616 > hide #!5 models
    7617 
    7618 > show #!5 models
    7619 
    7620 > hide #!7 models
    7621 
    7622 > show #!7 models
    7623 
    7624 > hide #!5 models
    7625 
    7626 > show #!5 models
    7627 
    7628 > hide #!7 models
    7629 
    7630 > show #!7 models
    7631 
    7632 > hide #!5 models
    7633 
    7634 > show #!5 models
    7635 
    7636 > color #7 #c0c0c086 models
    7637 
    7638 > hide #!5 models
    7639 
    7640 > show #!5 models
    7641 
    7642 > hide #!5 models
    7643 
    7644 > color zone #7 near #2 distance 6
    7645 
    7646 > show #!5 models
    7647 
    7648 > hide #!7 models
    7649 
    7650 > show #!7 models
    7651 
    7652 > hide #!5 models
    7653 
    7654 > show #!5 models
    7655 
    7656 > hide #!5 models
    7657 
    7658 > show #!5 models
    7659 
    7660 > hide #!5 models
    7661 
    7662 > show #!5 models
    7663 
    7664 > hide #!5 models
    7665 
    7666 > show #!5 models
    7667 
    7668 > hide #!7 models
    7669 
    7670 > show #2 models
    7671 
    7672 > hide #2 models
    7673 
    7674 > show #!3 models
    7675 
    7676 > show #!7 models
    7677 
    7678 > hide #!5 models
    7679 
    7680 > hide #!3 models
    7681 
    7682 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7683 > ring]/Figures/RAW Figures/Folds/CCW_intercalation.png" width 1275 height
    7684 > 1370 supersample 3
    7685 
    7686 > show #!5 models
    7687 
    7688 > hide #!7 models
    7689 
    7690 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7691 > ring]/Figures/RAW Figures/Folds/CW_Intercalation.png" width 1275 height 1370
    7692 > supersample 3
    7693 
    7694 > show #!3 models
    7695 
    7696 > color #5 #92929230 models
    7697 
    7698 > color zone #5 near #3 distance 6
    7699 
    7700 > save "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7701 > ring]/Figures/RAW Figures/Folds/intercalation.cxs"
    7702 
    7703 > hide #!5 models
    7704 
    7705 > ui mousemode right "tape measure"
    7706 
    7707 > marker segment #8 position 431.2,305.8,548.5 toPosition 467.4,324.1,397.7
    7708 > color yellow radius 0.3408 label 156.1 labelHeight 15.61 labelColor yellow
    7709 
    7710 > show #!1 models
    7711 
    7712 > hide #!1 models
    7713 
    7714 > show #2 models
    7715 
    7716 > marker segment #8 position 469.8,314.5,557.5 toPosition 508.6,304,404.1
    7717 > color yellow radius 0.3408 label 158.6 labelHeight 15.86 labelColor yellow
    7718 
    7719 > marker segment #8 position 437.4,305.2,549.7 toPosition 480.3,298.7,400
    7720 > color yellow radius 0.3408 label 155.9 labelHeight 15.59 labelColor yellow
    7721 
    7722 > marker delete #8
    7723 
    7724 > hide #2 models
    7725 
    7726 > show #!1 models
    7727 
    7728 > close #2#3-7
    7729 
    7730 > select add #1
    7731 
    7732 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    7733 
    7734 > hide sel atoms
    7735 
    7736 > select subtract #1
    7737 
    7738 Nothing selected 
    7739 
    7740 > cartoon style width 2.8 thickness 1.2
    7741 
    7742 > transparency #1 50 target c
    7743 
    7744 > transparency #1 100 target c
    7745 
    7746 > select /M:35-74
    7747 
    7748 242 atoms, 244 bonds, 31 residues, 1 model selected 
    7749 
    7750 > color sequential polymers target c palette blue:red:gold
    7751 
    7752 > transparency #1/M:35-74 0 target c
    7753 
    7754 > color sequential polymers target c palette blue:red:gold
    7755 
    7756 > color sequential #1/G:107-168 target c palette yellow:cyan
    7757 
    7758 > select /M:35-74
    7759 
    7760 242 atoms, 244 bonds, 31 residues, 1 model selected 
    7761 
    7762 > color sequential polymers target c palette blue:red:gold
    7763 
    7764 > transparency #1/M:35-74 0 target c
    7765 
    7766 > transparency #1/M:35-74 50 target c
    7767 
    7768 > transparency #1 50 target c
    7769 
    7770 > transparency #1 100 target c
    7771 
    7772 > select add #1
    7773 
    7774 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    7775 
    7776 > select subtract #1
    7777 
    7778 Nothing selected 
    7779 
    7780 > select /M:35-74
    7781 
    7782 242 atoms, 244 bonds, 31 residues, 1 model selected 
    7783 
    7784 > color sequential polymers target c palette blue:red:gold
    7785 
    7786 > transparency #1/M:35-74 0 target c
    7787 
    7788 > select /M:44-74
    7789 
    7790 242 atoms, 244 bonds, 31 residues, 1 model selected 
    7791 
    7792 > color sequential polymers target c palette blue:red:gold
    7793 
    7794 > color sequential polymers target c palette blue:red
    7795 
    7796 > color sequential polymers target c palette
    7797 
    7798 Missing "palette" keyword's argument 
    7799 
    7800 > color sequential polymers target c palette
    7801 
    7802 Missing "palette" keyword's argument 
    7803 
    7804 > color sequential polymers target c palette red:white
    7805 
    7806 > color sequential polymers target c palette red:yellow
    7807 
    7808 > pallette
    7809 
    7810 Unknown command: pallette 
    7811 
    7812 >
    7813 
    7814 Incomplete command: palette 
    7815 
    7816 > color sequential polymers target c palette "blue:red:gold"
    7817 
    7818 > color sequential polymers target c palette "blue:red:"
    7819 
    7820 Invalid "palette" argument: Missing color name or specifier 
    7821 
    7822 > color sequential polymers target c palette "blue:red"
    7823 
    7824 > color sequential polymers target c palette red-white-blue
    7825 
    7826 [Repeated 1 time(s)]
    7827 
    7828 > color sequential polymers target c palette blue-white-red
    7829 
    7830 > close session
    7831 
    7832 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    7833 > ring]/Mutations, Maps and Models/CW_C-
    7834 > ring_Phenix/ApplyNCS_20/NoDensity_PAA_apply_ncs_20.pdb"
    7835 
    7836 Summary of feedback from opening /Users/prash_mbp/Dropbox (VU Basic
    7837 Sciences)/[FiguresOnly__C-ring]/Mutations, Maps and Models/CW_C-
    7838 ring_Phenix/ApplyNCS_20/NoDensity_PAA_apply_ncs_20.pdb 
    7839 --- 
    7840 warnings | Ignored bad PDB record found on line 237 
    7841  
    7842  
    7843 Ignored bad PDB record found on line 2736 
    7844  
    7845  
    7846 Ignored bad PDB record found on line 4781 
    7847  
    7848  
    7849 Ignored bad PDB record found on line 5239 
    7850  
    7851  
    7852 Ignored bad PDB record found on line 5630 
    7853  
    7854  
    7855 1 messages similar to the above omitted 
    7856 Duplicate atom serial number found: 1 
    7857 Duplicate atom serial number found: 2 
    7858 Duplicate atom serial number found: 3 
    7859 Duplicate atom serial number found: 4 
    7860 Duplicate atom serial number found: 5 
    7861 229 messages similar to the above omitted 
    7862 Ignored bad PDB record found on line 6237 
    7863  
    7864  
    7865 Duplicate atom serial number found: 235 
    7866 Duplicate atom serial number found: 236 
    7867 Duplicate atom serial number found: 237 
    7868 Duplicate atom serial number found: 238 
    7869 Duplicate atom serial number found: 239 
    7870 2492 messages similar to the above omitted 
    7871 Ignored bad PDB record found on line 8736 
    7872  
    7873  
    7874 Duplicate atom serial number found: 2732 
    7875 Duplicate atom serial number found: 2733 
    7876 Duplicate atom serial number found: 2734 
    7877 Duplicate atom serial number found: 2735 
    7878 Duplicate atom serial number found: 2736 
    7879 2038 messages similar to the above omitted 
    7880 Ignored bad PDB record found on line 10781 
    7881  
    7882  
    7883 Duplicate atom serial number found: 4775 
    7884 Duplicate atom serial number found: 4776 
    7885 Duplicate atom serial number found: 4777 
    7886 Duplicate atom serial number found: 4778 
    7887 Duplicate atom serial number found: 4779 
    7888 451 messages similar to the above omitted 
    7889 Ignored bad PDB record found on line 11239 
    7890  
    7891  
    7892 Duplicate atom serial number found: 5231 
    7893 Duplicate atom serial number found: 5232 
    7894 Duplicate atom serial number found: 5233 
    7895 Duplicate atom serial number found: 5234 
    7896 Duplicate atom serial number found: 5235 
    7897 384 messages similar to the above omitted 
    7898 Ignored bad PDB record found on line 11630 
    7899  
    7900  
    7901 Duplicate atom serial number found: 5620 
    7902 Duplicate atom serial number found: 5621 
    7903 Duplicate atom serial number found: 5622 
    7904 Duplicate atom serial number found: 5623 
    7905 Duplicate atom serial number found: 5624 
    7906 364 messages similar to the above omitted 
    7907 Ignored bad PDB record found on line 12001 
    7908  
    7909  
    7910 Duplicate atom serial number found: 1 
    7911 Duplicate atom serial number found: 2 
    7912 Duplicate atom serial number found: 3 
    7913 Duplicate atom serial number found: 4 
    7914 Duplicate atom serial number found: 5 
    7915 229 messages similar to the above omitted 
    7916 Ignored bad PDB record found on line 12237 
    7917  
    7918  
    7919 Duplicate atom serial number found: 235 
    7920 Duplicate atom serial number found: 236 
    7921 Duplicate atom serial number found: 237 
    7922 Duplicate atom serial number found: 238 
    7923 Duplicate atom serial number found: 239 
    7924 2492 messages similar to the above omitted 
    7925 Ignored bad PDB record found on line 14736 
    7926  
    7927  
    7928 Duplicate atom serial number found: 2732 
    7929 Duplicate atom serial number found: 2733 
    7930 Duplicate atom serial number found: 2734 
    7931 Duplicate atom serial number found: 2735 
    7932 Duplicate atom serial number found: 2736 
    7933 2038 messages similar to the above omitted 
    7934 Ignored bad PDB record found on line 16781 
    7935  
    7936  
    7937 Duplicate atom serial number found: 4775 
    7938 Duplicate atom serial number found: 4776 
    7939 Duplicate atom serial number found: 4777 
    7940 Duplicate atom serial number found: 4778 
    7941 Duplicate atom serial number found: 4779 
    7942 451 messages similar to the above omitted 
    7943 Ignored bad PDB record found on line 17239 
    7944  
    7945  
    7946 Duplicate atom serial number found: 5231 
    7947 Duplicate atom serial number found: 5232 
    7948 Duplicate atom serial number found: 5233 
    7949 Duplicate atom serial number found: 5234 
    7950 Duplicate atom serial number found: 5235 
    7951 384 messages similar to the above omitted 
    7952 Ignored bad PDB record found on line 17630 
    7953  
    7954  
    7955 Duplicate atom serial number found: 5620 
    7956 Duplicate atom serial number found: 5621 
    7957 Duplicate atom serial number found: 5622 
    7958 Duplicate atom serial number found: 5623 
    7959 Duplicate atom serial number found: 5624 
    7960 364 messages similar to the above omitted 
    7961 Ignored bad PDB record found on line 18001 
    7962  
    7963  
    7964 Duplicate atom serial number found: 1 
    7965 Duplicate atom serial number found: 2 
    7966 Duplicate atom serial number found: 3 
    7967 Duplicate atom serial number found: 4 
    7968 Duplicate atom serial number found: 5 
    7969 229 messages similar to the above omitted 
    7970 Ignored bad PDB record found on line 18237 
    7971  
    7972  
    7973 Duplicate atom serial number found: 235 
    7974 Duplicate atom serial number found: 236 
    7975 Duplicate atom serial number found: 237 
    7976 Duplicate atom serial number found: 238 
    7977 Duplicate atom serial number found: 239 
    7978 2492 messages similar to the above omitted 
    7979 Ignored bad PDB record found on line 20736 
    7980  
    7981  
    7982 Duplicate atom serial number found: 2732 
    7983 Duplicate atom serial number found: 2733 
    7984 Duplicate atom serial number found: 2734 
    7985 Duplicate atom serial number found: 2735 
    7986 Duplicate atom serial number found: 2736 
    7987 2038 messages similar to the above omitted 
    7988 Ignored bad PDB record found on line 22781 
    7989  
    7990  
    7991 Duplicate atom serial number found: 4775 
    7992 Duplicate atom serial number found: 4776 
    7993 Duplicate atom serial number found: 4777 
    7994 Duplicate atom serial number found: 4778 
    7995 Duplicate atom serial number found: 4779 
    7996 451 messages similar to the above omitted 
    7997 Ignored bad PDB record found on line 23239 
    7998  
    7999  
    8000 Duplicate atom serial number found: 5231 
    8001 Duplicate atom serial number found: 5232 
    8002 Duplicate atom serial number found: 5233 
    8003 Duplicate atom serial number found: 5234 
    8004 Duplicate atom serial number found: 5235 
    8005 384 messages similar to the above omitted 
    8006 Ignored bad PDB record found on line 23630 
    8007  
    8008  
    8009 Duplicate atom serial number found: 5620 
    8010 Duplicate atom serial number found: 5621 
    8011 Duplicate atom serial number found: 5622 
    8012 Duplicate atom serial number found: 5623 
    8013 Duplicate atom serial number found: 5624 
    8014 364 messages similar to the above omitted 
    8015 Ignored bad PDB record found on line 24001 
    8016  
    8017  
    8018 Duplicate atom serial number found: 1 
    8019 Duplicate atom serial number found: 2 
    8020 Duplicate atom serial number found: 3 
    8021 Duplicate atom serial number found: 4 
    8022 Duplicate atom serial number found: 5 
    8023 229 messages similar to the above omitted 
    8024 Ignored bad PDB record found on line 24237 
    8025  
    8026  
    8027 Duplicate atom serial number found: 235 
    8028 Duplicate atom serial number found: 236 
    8029 Duplicate atom serial number found: 237 
    8030 Duplicate atom serial number found: 238 
    8031 Duplicate atom serial number found: 239 
    8032 2492 messages similar to the above omitted 
    8033 Ignored bad PDB record found on line 26736 
    8034  
    8035  
    8036 Duplicate atom serial number found: 2732 
    8037 Duplicate atom serial number found: 2733 
    8038 Duplicate atom serial number found: 2734 
    8039 Duplicate atom serial number found: 2735 
    8040 Duplicate atom serial number found: 2736 
    8041 2038 messages similar to the above omitted 
    8042 Ignored bad PDB record found on line 28781 
    8043  
    8044  
    8045 Duplicate atom serial number found: 4775 
    8046 Duplicate atom serial number found: 4776 
    8047 Duplicate atom serial number found: 4777 
    8048 Duplicate atom serial number found: 4778 
    8049 Duplicate atom serial number found: 4779 
    8050 451 messages similar to the above omitted 
    8051 Ignored bad PDB record found on line 29239 
    8052  
    8053  
    8054 Duplicate atom serial number found: 5231 
    8055 Duplicate atom serial number found: 5232 
    8056 Duplicate atom serial number found: 5233 
    8057 Duplicate atom serial number found: 5234 
    8058 Duplicate atom serial number found: 5235 
    8059 384 messages similar to the above omitted 
    8060 Ignored bad PDB record found on line 29630 
    8061  
    8062  
    8063 Duplicate atom serial number found: 5620 
    8064 Duplicate atom serial number found: 5621 
    8065 Duplicate atom serial number found: 5622 
    8066 Duplicate atom serial number found: 5623 
    8067 Duplicate atom serial number found: 5624 
    8068 364 messages similar to the above omitted 
    8069 Ignored bad PDB record found on line 30001 
    8070  
    8071  
    8072 Duplicate atom serial number found: 1 
    8073 Duplicate atom serial number found: 2 
    8074 Duplicate atom serial number found: 3 
    8075 Duplicate atom serial number found: 4 
    8076 Duplicate atom serial number found: 5 
    8077 229 messages similar to the above omitted 
    8078 Ignored bad PDB record found on line 30237 
    8079  
    8080  
    8081 Duplicate atom serial number found: 235 
    8082 Duplicate atom serial number found: 236 
    8083 Duplicate atom serial number found: 237 
    8084 Duplicate atom serial number found: 238 
    8085 Duplicate atom serial number found: 239 
    8086 2492 messages similar to the above omitted 
    8087 Ignored bad PDB record found on line 32736 
    8088  
    8089  
    8090 Duplicate atom serial number found: 2732 
    8091 Duplicate atom serial number found: 2733 
    8092 Duplicate atom serial number found: 2734 
    8093 Duplicate atom serial number found: 2735 
    8094 Duplicate atom serial number found: 2736 
    8095 2038 messages similar to the above omitted 
    8096 Ignored bad PDB record found on line 34781 
    8097  
    8098  
    8099 Duplicate atom serial number found: 4775 
    8100 Duplicate atom serial number found: 4776 
    8101 Duplicate atom serial number found: 4777 
    8102 Duplicate atom serial number found: 4778 
    8103 Duplicate atom serial number found: 4779 
    8104 451 messages similar to the above omitted 
    8105 Ignored bad PDB record found on line 35239 
    8106  
    8107  
    8108 Duplicate atom serial number found: 5231 
    8109 Duplicate atom serial number found: 5232 
    8110 Duplicate atom serial number found: 5233 
    8111 Duplicate atom serial number found: 5234 
    8112 Duplicate atom serial number found: 5235 
    8113 384 messages similar to the above omitted 
    8114 Ignored bad PDB record found on line 35630 
    8115  
    8116  
    8117 Duplicate atom serial number found: 5620 
    8118 Duplicate atom serial number found: 5621 
    8119 Duplicate atom serial number found: 5622 
    8120 Duplicate atom serial number found: 5623 
    8121 Duplicate atom serial number found: 5624 
    8122 364 messages similar to the above omitted 
    8123 Ignored bad PDB record found on line 36001 
    8124  
    8125  
    8126 Duplicate atom serial number found: 1 
    8127 Duplicate atom serial number found: 2 
    8128 Duplicate atom serial number found: 3 
    8129 Duplicate atom serial number found: 4 
    8130 Duplicate atom serial number found: 5 
    8131 229 messages similar to the above omitted 
    8132 Ignored bad PDB record found on line 36237 
    8133  
    8134  
    8135 Duplicate atom serial number found: 235 
    8136 Duplicate atom serial number found: 236 
    8137 Duplicate atom serial number found: 237 
    8138 Duplicate atom serial number found: 238 
    8139 Duplicate atom serial number found: 239 
    8140 2492 messages similar to the above omitted 
    8141 Ignored bad PDB record found on line 38736 
    8142  
    8143  
    8144 Duplicate atom serial number found: 2732 
    8145 Duplicate atom serial number found: 2733 
    8146 Duplicate atom serial number found: 2734 
    8147 Duplicate atom serial number found: 2735 
    8148 Duplicate atom serial number found: 2736 
    8149 2038 messages similar to the above omitted 
    8150 Ignored bad PDB record found on line 40781 
    8151  
    8152  
    8153 Duplicate atom serial number found: 4775 
    8154 Duplicate atom serial number found: 4776 
    8155 Duplicate atom serial number found: 4777 
    8156 Duplicate atom serial number found: 4778 
    8157 Duplicate atom serial number found: 4779 
    8158 451 messages similar to the above omitted 
    8159 Ignored bad PDB record found on line 41239 
    8160  
    8161  
    8162 Duplicate atom serial number found: 5231 
    8163 Duplicate atom serial number found: 5232 
    8164 Duplicate atom serial number found: 5233 
    8165 Duplicate atom serial number found: 5234 
    8166 Duplicate atom serial number found: 5235 
    8167 384 messages similar to the above omitted 
    8168 Ignored bad PDB record found on line 41630 
    8169  
    8170  
    8171 Duplicate atom serial number found: 5620 
    8172 Duplicate atom serial number found: 5621 
    8173 Duplicate atom serial number found: 5622 
    8174 Duplicate atom serial number found: 5623 
    8175 Duplicate atom serial number found: 5624 
    8176 364 messages similar to the above omitted 
    8177 Ignored bad PDB record found on line 42001 
    8178  
    8179  
    8180 Duplicate atom serial number found: 1 
    8181 Duplicate atom serial number found: 2 
    8182 Duplicate atom serial number found: 3 
    8183 Duplicate atom serial number found: 4 
    8184 Duplicate atom serial number found: 5 
    8185 229 messages similar to the above omitted 
    8186 Ignored bad PDB record found on line 42237 
    8187  
    8188  
    8189 Duplicate atom serial number found: 235 
    8190 Duplicate atom serial number found: 236 
    8191 Duplicate atom serial number found: 237 
    8192 Duplicate atom serial number found: 238 
    8193 Duplicate atom serial number found: 239 
    8194 2492 messages similar to the above omitted 
    8195 Ignored bad PDB record found on line 44736 
    8196  
    8197  
    8198 Duplicate atom serial number found: 2732 
    8199 Duplicate atom serial number found: 2733 
    8200 Duplicate atom serial number found: 2734 
    8201 Duplicate atom serial number found: 2735 
    8202 Duplicate atom serial number found: 2736 
    8203 2038 messages similar to the above omitted 
    8204 Ignored bad PDB record found on line 46781 
    8205  
    8206  
    8207 Duplicate atom serial number found: 4775 
    8208 Duplicate atom serial number found: 4776 
    8209 Duplicate atom serial number found: 4777 
    8210 Duplicate atom serial number found: 4778 
    8211 Duplicate atom serial number found: 4779 
    8212 451 messages similar to the above omitted 
    8213 Ignored bad PDB record found on line 47239 
    8214  
    8215  
    8216 Duplicate atom serial number found: 5231 
    8217 Duplicate atom serial number found: 5232 
    8218 Duplicate atom serial number found: 5233 
    8219 Duplicate atom serial number found: 5234 
    8220 Duplicate atom serial number found: 5235 
    8221 384 messages similar to the above omitted 
    8222 Ignored bad PDB record found on line 47630 
    8223  
    8224  
    8225 Duplicate atom serial number found: 5620 
    8226 Duplicate atom serial number found: 5621 
    8227 Duplicate atom serial number found: 5622 
    8228 Duplicate atom serial number found: 5623 
    8229 Duplicate atom serial number found: 5624 
    8230 364 messages similar to the above omitted 
    8231 Ignored bad PDB record found on line 48001 
    8232  
    8233  
    8234 Duplicate atom serial number found: 1 
    8235 Duplicate atom serial number found: 2 
    8236 Duplicate atom serial number found: 3 
    8237 Duplicate atom serial number found: 4 
    8238 Duplicate atom serial number found: 5 
    8239 229 messages similar to the above omitted 
    8240 Ignored bad PDB record found on line 48237 
    8241  
    8242  
    8243 Duplicate atom serial number found: 235 
    8244 Duplicate atom serial number found: 236 
    8245 Duplicate atom serial number found: 237 
    8246 Duplicate atom serial number found: 238 
    8247 Duplicate atom serial number found: 239 
    8248 2492 messages similar to the above omitted 
    8249 Ignored bad PDB record found on line 50736 
    8250  
    8251  
    8252 Duplicate atom serial number found: 2732 
    8253 Duplicate atom serial number found: 2733 
    8254 Duplicate atom serial number found: 2734 
    8255 Duplicate atom serial number found: 2735 
    8256 Duplicate atom serial number found: 2736 
    8257 2038 messages similar to the above omitted 
    8258 Ignored bad PDB record found on line 52781 
    8259  
    8260  
    8261 Duplicate atom serial number found: 4775 
    8262 Duplicate atom serial number found: 4776 
    8263 Duplicate atom serial number found: 4777 
    8264 Duplicate atom serial number found: 4778 
    8265 Duplicate atom serial number found: 4779 
    8266 451 messages similar to the above omitted 
    8267 Ignored bad PDB record found on line 53239 
    8268  
    8269  
    8270 Duplicate atom serial number found: 5231 
    8271 Duplicate atom serial number found: 5232 
    8272 Duplicate atom serial number found: 5233 
    8273 Duplicate atom serial number found: 5234 
    8274 Duplicate atom serial number found: 5235 
    8275 384 messages similar to the above omitted 
    8276 Ignored bad PDB record found on line 53630 
    8277  
    8278  
    8279 Duplicate atom serial number found: 5620 
    8280 Duplicate atom serial number found: 5621 
    8281 Duplicate atom serial number found: 5622 
    8282 Duplicate atom serial number found: 5623 
    8283 Duplicate atom serial number found: 5624 
    8284 364 messages similar to the above omitted 
    8285 Ignored bad PDB record found on line 54001 
    8286  
    8287  
    8288 Duplicate atom serial number found: 1 
    8289 Duplicate atom serial number found: 2 
    8290 Duplicate atom serial number found: 3 
    8291 Duplicate atom serial number found: 4 
    8292 Duplicate atom serial number found: 5 
    8293 229 messages similar to the above omitted 
    8294 Ignored bad PDB record found on line 54237 
    8295  
    8296  
    8297 Duplicate atom serial number found: 235 
    8298 Duplicate atom serial number found: 236 
    8299 Duplicate atom serial number found: 237 
    8300 Duplicate atom serial number found: 238 
    8301 Duplicate atom serial number found: 239 
    8302 2492 messages similar to the above omitted 
    8303 Ignored bad PDB record found on line 56736 
    8304  
    8305  
    8306 Duplicate atom serial number found: 2732 
    8307 Duplicate atom serial number found: 2733 
    8308 Duplicate atom serial number found: 2734 
    8309 Duplicate atom serial number found: 2735 
    8310 Duplicate atom serial number found: 2736 
    8311 2038 messages similar to the above omitted 
    8312 Ignored bad PDB record found on line 58781 
    8313  
    8314  
    8315 Duplicate atom serial number found: 4775 
    8316 Duplicate atom serial number found: 4776 
    8317 Duplicate atom serial number found: 4777 
    8318 Duplicate atom serial number found: 4778 
    8319 Duplicate atom serial number found: 4779 
    8320 451 messages similar to the above omitted 
    8321 Ignored bad PDB record found on line 59239 
    8322  
    8323  
    8324 Duplicate atom serial number found: 5231 
    8325 Duplicate atom serial number found: 5232 
    8326 Duplicate atom serial number found: 5233 
    8327 Duplicate atom serial number found: 5234 
    8328 Duplicate atom serial number found: 5235 
    8329 384 messages similar to the above omitted 
    8330 Ignored bad PDB record found on line 59630 
    8331  
    8332  
    8333 Duplicate atom serial number found: 5620 
    8334 Duplicate atom serial number found: 5621 
    8335 Duplicate atom serial number found: 5622 
    8336 Duplicate atom serial number found: 5623 
    8337 Duplicate atom serial number found: 5624 
    8338 364 messages similar to the above omitted 
    8339 Ignored bad PDB record found on line 60001 
    8340  
    8341  
    8342 Duplicate atom serial number found: 1 
    8343 Duplicate atom serial number found: 2 
    8344 Duplicate atom serial number found: 3 
    8345 Duplicate atom serial number found: 4 
    8346 Duplicate atom serial number found: 5 
    8347 229 messages similar to the above omitted 
    8348 Ignored bad PDB record found on line 60237 
    8349  
    8350  
    8351 Duplicate atom serial number found: 235 
    8352 Duplicate atom serial number found: 236 
    8353 Duplicate atom serial number found: 237 
    8354 Duplicate atom serial number found: 238 
    8355 Duplicate atom serial number found: 239 
    8356 2492 messages similar to the above omitted 
    8357 Ignored bad PDB record found on line 62736 
    8358  
    8359  
    8360 Duplicate atom serial number found: 2732 
    8361 Duplicate atom serial number found: 2733 
    8362 Duplicate atom serial number found: 2734 
    8363 Duplicate atom serial number found: 2735 
    8364 Duplicate atom serial number found: 2736 
    8365 2038 messages similar to the above omitted 
    8366 Ignored bad PDB record found on line 64781 
    8367  
    8368  
    8369 Duplicate atom serial number found: 4775 
    8370 Duplicate atom serial number found: 4776 
    8371 Duplicate atom serial number found: 4777 
    8372 Duplicate atom serial number found: 4778 
    8373 Duplicate atom serial number found: 4779 
    8374 451 messages similar to the above omitted 
    8375 Ignored bad PDB record found on line 65239 
    8376  
    8377  
    8378 Duplicate atom serial number found: 5231 
    8379 Duplicate atom serial number found: 5232 
    8380 Duplicate atom serial number found: 5233 
    8381 Duplicate atom serial number found: 5234 
    8382 Duplicate atom serial number found: 5235 
    8383 384 messages similar to the above omitted 
    8384 Ignored bad PDB record found on line 65630 
    8385  
    8386  
    8387 Duplicate atom serial number found: 5620 
    8388 Duplicate atom serial number found: 5621 
    8389 Duplicate atom serial number found: 5622 
    8390 Duplicate atom serial number found: 5623 
    8391 Duplicate atom serial number found: 5624 
    8392 364 messages similar to the above omitted 
    8393 Ignored bad PDB record found on line 66001 
    8394  
    8395  
    8396 Duplicate atom serial number found: 1 
    8397 Duplicate atom serial number found: 2 
    8398 Duplicate atom serial number found: 3 
    8399 Duplicate atom serial number found: 4 
    8400 Duplicate atom serial number found: 5 
    8401 229 messages similar to the above omitted 
    8402 Ignored bad PDB record found on line 66237 
    8403  
    8404  
    8405 Duplicate atom serial number found: 235 
    8406 Duplicate atom serial number found: 236 
    8407 Duplicate atom serial number found: 237 
    8408 Duplicate atom serial number found: 238 
    8409 Duplicate atom serial number found: 239 
    8410 2492 messages similar to the above omitted 
    8411 Ignored bad PDB record found on line 68736 
    8412  
    8413  
    8414 Duplicate atom serial number found: 2732 
    8415 Duplicate atom serial number found: 2733 
    8416 Duplicate atom serial number found: 2734 
    8417 Duplicate atom serial number found: 2735 
    8418 Duplicate atom serial number found: 2736 
    8419 2038 messages similar to the above omitted 
    8420 Ignored bad PDB record found on line 70781 
    8421  
    8422  
    8423 Duplicate atom serial number found: 4775 
    8424 Duplicate atom serial number found: 4776 
    8425 Duplicate atom serial number found: 4777 
    8426 Duplicate atom serial number found: 4778 
    8427 Duplicate atom serial number found: 4779 
    8428 451 messages similar to the above omitted 
    8429 Ignored bad PDB record found on line 71239 
    8430  
    8431  
    8432 Duplicate atom serial number found: 5231 
    8433 Duplicate atom serial number found: 5232 
    8434 Duplicate atom serial number found: 5233 
    8435 Duplicate atom serial number found: 5234 
    8436 Duplicate atom serial number found: 5235 
    8437 384 messages similar to the above omitted 
    8438 Ignored bad PDB record found on line 71630 
    8439  
    8440  
    8441 Duplicate atom serial number found: 5620 
    8442 Duplicate atom serial number found: 5621 
    8443 Duplicate atom serial number found: 5622 
    8444 Duplicate atom serial number found: 5623 
    8445 Duplicate atom serial number found: 5624 
    8446 364 messages similar to the above omitted 
    8447 Ignored bad PDB record found on line 72001 
    8448  
    8449  
    8450 Duplicate atom serial number found: 1 
    8451 Duplicate atom serial number found: 2 
    8452 Duplicate atom serial number found: 3 
    8453 Duplicate atom serial number found: 4 
    8454 Duplicate atom serial number found: 5 
    8455 229 messages similar to the above omitted 
    8456 Ignored bad PDB record found on line 72237 
    8457  
    8458  
    8459 Duplicate atom serial number found: 235 
    8460 Duplicate atom serial number found: 236 
    8461 Duplicate atom serial number found: 237 
    8462 Duplicate atom serial number found: 238 
    8463 Duplicate atom serial number found: 239 
    8464 2492 messages similar to the above omitted 
    8465 Ignored bad PDB record found on line 74736 
    8466  
    8467  
    8468 Duplicate atom serial number found: 2732 
    8469 Duplicate atom serial number found: 2733 
    8470 Duplicate atom serial number found: 2734 
    8471 Duplicate atom serial number found: 2735 
    8472 Duplicate atom serial number found: 2736 
    8473 2038 messages similar to the above omitted 
    8474 Ignored bad PDB record found on line 76781 
    8475  
    8476  
    8477 Duplicate atom serial number found: 4775 
    8478 Duplicate atom serial number found: 4776 
    8479 Duplicate atom serial number found: 4777 
    8480 Duplicate atom serial number found: 4778 
    8481 Duplicate atom serial number found: 4779 
    8482 451 messages similar to the above omitted 
    8483 Ignored bad PDB record found on line 77239 
    8484  
    8485  
    8486 Duplicate atom serial number found: 5231 
    8487 Duplicate atom serial number found: 5232 
    8488 Duplicate atom serial number found: 5233 
    8489 Duplicate atom serial number found: 5234 
    8490 Duplicate atom serial number found: 5235 
    8491 384 messages similar to the above omitted 
    8492 Ignored bad PDB record found on line 77630 
    8493  
    8494  
    8495 Duplicate atom serial number found: 5620 
    8496 Duplicate atom serial number found: 5621 
    8497 Duplicate atom serial number found: 5622 
    8498 Duplicate atom serial number found: 5623 
    8499 Duplicate atom serial number found: 5624 
    8500 364 messages similar to the above omitted 
    8501 Ignored bad PDB record found on line 78001 
    8502  
    8503  
    8504 Duplicate atom serial number found: 1 
    8505 Duplicate atom serial number found: 2 
    8506 Duplicate atom serial number found: 3 
    8507 Duplicate atom serial number found: 4 
    8508 Duplicate atom serial number found: 5 
    8509 229 messages similar to the above omitted 
    8510 Ignored bad PDB record found on line 78237 
    8511  
    8512  
    8513 Duplicate atom serial number found: 235 
    8514 Duplicate atom serial number found: 236 
    8515 Duplicate atom serial number found: 237 
    8516 Duplicate atom serial number found: 238 
    8517 Duplicate atom serial number found: 239 
    8518 2492 messages similar to the above omitted 
    8519 Ignored bad PDB record found on line 80736 
    8520  
    8521  
    8522 Duplicate atom serial number found: 2732 
    8523 Duplicate atom serial number found: 2733 
    8524 Duplicate atom serial number found: 2734 
    8525 Duplicate atom serial number found: 2735 
    8526 Duplicate atom serial number found: 2736 
    8527 2038 messages similar to the above omitted 
    8528 Ignored bad PDB record found on line 82781 
    8529  
    8530  
    8531 Duplicate atom serial number found: 4775 
    8532 Duplicate atom serial number found: 4776 
    8533 Duplicate atom serial number found: 4777 
    8534 Duplicate atom serial number found: 4778 
    8535 Duplicate atom serial number found: 4779 
    8536 451 messages similar to the above omitted 
    8537 Ignored bad PDB record found on line 83239 
    8538  
    8539  
    8540 Duplicate atom serial number found: 5231 
    8541 Duplicate atom serial number found: 5232 
    8542 Duplicate atom serial number found: 5233 
    8543 Duplicate atom serial number found: 5234 
    8544 Duplicate atom serial number found: 5235 
    8545 384 messages similar to the above omitted 
    8546 Ignored bad PDB record found on line 83630 
    8547  
    8548  
    8549 Duplicate atom serial number found: 5620 
    8550 Duplicate atom serial number found: 5621 
    8551 Duplicate atom serial number found: 5622 
    8552 Duplicate atom serial number found: 5623 
    8553 Duplicate atom serial number found: 5624 
    8554 364 messages similar to the above omitted 
    8555 Ignored bad PDB record found on line 84001 
    8556  
    8557  
    8558 Duplicate atom serial number found: 1 
    8559 Duplicate atom serial number found: 2 
    8560 Duplicate atom serial number found: 3 
    8561 Duplicate atom serial number found: 4 
    8562 Duplicate atom serial number found: 5 
    8563 229 messages similar to the above omitted 
    8564 Ignored bad PDB record found on line 84237 
    8565  
    8566  
    8567 Duplicate atom serial number found: 235 
    8568 Duplicate atom serial number found: 236 
    8569 Duplicate atom serial number found: 237 
    8570 Duplicate atom serial number found: 238 
    8571 Duplicate atom serial number found: 239 
    8572 2492 messages similar to the above omitted 
    8573 Ignored bad PDB record found on line 86736 
    8574  
    8575  
    8576 Duplicate atom serial number found: 2732 
    8577 Duplicate atom serial number found: 2733 
    8578 Duplicate atom serial number found: 2734 
    8579 Duplicate atom serial number found: 2735 
    8580 Duplicate atom serial number found: 2736 
    8581 2038 messages similar to the above omitted 
    8582 Ignored bad PDB record found on line 88781 
    8583  
    8584  
    8585 Duplicate atom serial number found: 4775 
    8586 Duplicate atom serial number found: 4776 
    8587 Duplicate atom serial number found: 4777 
    8588 Duplicate atom serial number found: 4778 
    8589 Duplicate atom serial number found: 4779 
    8590 451 messages similar to the above omitted 
    8591 Ignored bad PDB record found on line 89239 
    8592  
    8593  
    8594 Duplicate atom serial number found: 5231 
    8595 Duplicate atom serial number found: 5232 
    8596 Duplicate atom serial number found: 5233 
    8597 Duplicate atom serial number found: 5234 
    8598 Duplicate atom serial number found: 5235 
    8599 384 messages similar to the above omitted 
    8600 Ignored bad PDB record found on line 89630 
    8601  
    8602  
    8603 Duplicate atom serial number found: 5620 
    8604 Duplicate atom serial number found: 5621 
    8605 Duplicate atom serial number found: 5622 
    8606 Duplicate atom serial number found: 5623 
    8607 Duplicate atom serial number found: 5624 
    8608 364 messages similar to the above omitted 
    8609 Ignored bad PDB record found on line 90001 
    8610  
    8611  
    8612 Duplicate atom serial number found: 1 
    8613 Duplicate atom serial number found: 2 
    8614 Duplicate atom serial number found: 3 
    8615 Duplicate atom serial number found: 4 
    8616 Duplicate atom serial number found: 5 
    8617 229 messages similar to the above omitted 
    8618 Ignored bad PDB record found on line 90237 
    8619  
    8620  
    8621 Duplicate atom serial number found: 235 
    8622 Duplicate atom serial number found: 236 
    8623 Duplicate atom serial number found: 237 
    8624 Duplicate atom serial number found: 238 
    8625 Duplicate atom serial number found: 239 
    8626 2492 messages similar to the above omitted 
    8627 Ignored bad PDB record found on line 92736 
    8628  
    8629  
    8630 Duplicate atom serial number found: 2732 
    8631 Duplicate atom serial number found: 2733 
    8632 Duplicate atom serial number found: 2734 
    8633 Duplicate atom serial number found: 2735 
    8634 Duplicate atom serial number found: 2736 
    8635 2038 messages similar to the above omitted 
    8636 Ignored bad PDB record found on line 94781 
    8637  
    8638  
    8639 Duplicate atom serial number found: 4775 
    8640 Duplicate atom serial number found: 4776 
    8641 Duplicate atom serial number found: 4777 
    8642 Duplicate atom serial number found: 4778 
    8643 Duplicate atom serial number found: 4779 
    8644 451 messages similar to the above omitted 
    8645 Ignored bad PDB record found on line 95239 
    8646  
    8647  
    8648 Duplicate atom serial number found: 5231 
    8649 Duplicate atom serial number found: 5232 
    8650 Duplicate atom serial number found: 5233 
    8651 Duplicate atom serial number found: 5234 
    8652 Duplicate atom serial number found: 5235 
    8653 384 messages similar to the above omitted 
    8654 Ignored bad PDB record found on line 95630 
    8655  
    8656  
    8657 Duplicate atom serial number found: 5620 
    8658 Duplicate atom serial number found: 5621 
    8659 Duplicate atom serial number found: 5622 
    8660 Duplicate atom serial number found: 5623 
    8661 Duplicate atom serial number found: 5624 
    8662 364 messages similar to the above omitted 
    8663 Ignored bad PDB record found on line 96001 
    8664  
    8665  
    8666 Duplicate atom serial number found: 1 
    8667 Duplicate atom serial number found: 2 
    8668 Duplicate atom serial number found: 3 
    8669 Duplicate atom serial number found: 4 
    8670 Duplicate atom serial number found: 5 
    8671 229 messages similar to the above omitted 
    8672 Ignored bad PDB record found on line 96237 
    8673  
    8674  
    8675 Duplicate atom serial number found: 235 
    8676 Duplicate atom serial number found: 236 
    8677 Duplicate atom serial number found: 237 
    8678 Duplicate atom serial number found: 238 
    8679 Duplicate atom serial number found: 239 
    8680 2492 messages similar to the above omitted 
    8681 Ignored bad PDB record found on line 98736 
    8682  
    8683  
    8684 Duplicate atom serial number found: 2732 
    8685 Duplicate atom serial number found: 2733 
    8686 Duplicate atom serial number found: 2734 
    8687 Duplicate atom serial number found: 2735 
    8688 Duplicate atom serial number found: 2736 
    8689 2038 messages similar to the above omitted 
    8690 Ignored bad PDB record found on line 100781 
    8691  
    8692  
    8693 Duplicate atom serial number found: 4775 
    8694 Duplicate atom serial number found: 4776 
    8695 Duplicate atom serial number found: 4777 
    8696 Duplicate atom serial number found: 4778 
    8697 Duplicate atom serial number found: 4779 
    8698 451 messages similar to the above omitted 
    8699 Ignored bad PDB record found on line 101239 
    8700  
    8701  
    8702 Duplicate atom serial number found: 5231 
    8703 Duplicate atom serial number found: 5232 
    8704 Duplicate atom serial number found: 5233 
    8705 Duplicate atom serial number found: 5234 
    8706 Duplicate atom serial number found: 5235 
    8707 384 messages similar to the above omitted 
    8708 Ignored bad PDB record found on line 101630 
    8709  
    8710  
    8711 Duplicate atom serial number found: 5620 
    8712 Duplicate atom serial number found: 5621 
    8713 Duplicate atom serial number found: 5622 
    8714 Duplicate atom serial number found: 5623 
    8715 Duplicate atom serial number found: 5624 
    8716 364 messages similar to the above omitted 
    8717 Ignored bad PDB record found on line 102001 
    8718  
    8719  
    8720 Duplicate atom serial number found: 1 
    8721 Duplicate atom serial number found: 2 
    8722 Duplicate atom serial number found: 3 
    8723 Duplicate atom serial number found: 4 
    8724 Duplicate atom serial number found: 5 
    8725 229 messages similar to the above omitted 
    8726 Ignored bad PDB record found on line 102237 
    8727  
    8728  
    8729 Duplicate atom serial number found: 235 
    8730 Duplicate atom serial number found: 236 
    8731 Duplicate atom serial number found: 237 
    8732 Duplicate atom serial number found: 238 
    8733 Duplicate atom serial number found: 239 
    8734 2492 messages similar to the above omitted 
    8735 Ignored bad PDB record found on line 104736 
    8736  
    8737  
    8738 Duplicate atom serial number found: 2732 
    8739 Duplicate atom serial number found: 2733 
    8740 Duplicate atom serial number found: 2734 
    8741 Duplicate atom serial number found: 2735 
    8742 Duplicate atom serial number found: 2736 
    8743 2038 messages similar to the above omitted 
    8744 Ignored bad PDB record found on line 106781 
    8745  
    8746  
    8747 Duplicate atom serial number found: 4775 
    8748 Duplicate atom serial number found: 4776 
    8749 Duplicate atom serial number found: 4777 
    8750 Duplicate atom serial number found: 4778 
    8751 Duplicate atom serial number found: 4779 
    8752 451 messages similar to the above omitted 
    8753 Ignored bad PDB record found on line 107239 
    8754  
    8755  
    8756 Duplicate atom serial number found: 5231 
    8757 Duplicate atom serial number found: 5232 
    8758 Duplicate atom serial number found: 5233 
    8759 Duplicate atom serial number found: 5234 
    8760 Duplicate atom serial number found: 5235 
    8761 384 messages similar to the above omitted 
    8762 Ignored bad PDB record found on line 107630 
    8763  
    8764  
    8765 Duplicate atom serial number found: 5620 
    8766 Duplicate atom serial number found: 5621 
    8767 Duplicate atom serial number found: 5622 
    8768 Duplicate atom serial number found: 5623 
    8769 Duplicate atom serial number found: 5624 
    8770 364 messages similar to the above omitted 
    8771 Ignored bad PDB record found on line 108001 
    8772  
    8773  
    8774 Duplicate atom serial number found: 1 
    8775 Duplicate atom serial number found: 2 
    8776 Duplicate atom serial number found: 3 
    8777 Duplicate atom serial number found: 4 
    8778 Duplicate atom serial number found: 5 
    8779 229 messages similar to the above omitted 
    8780 Ignored bad PDB record found on line 108237 
    8781  
    8782  
    8783 Duplicate atom serial number found: 235 
    8784 Duplicate atom serial number found: 236 
    8785 Duplicate atom serial number found: 237 
    8786 Duplicate atom serial number found: 238 
    8787 Duplicate atom serial number found: 239 
    8788 2492 messages similar to the above omitted 
    8789 Ignored bad PDB record found on line 110736 
    8790  
    8791  
    8792 Duplicate atom serial number found: 2732 
    8793 Duplicate atom serial number found: 2733 
    8794 Duplicate atom serial number found: 2734 
    8795 Duplicate atom serial number found: 2735 
    8796 Duplicate atom serial number found: 2736 
    8797 2038 messages similar to the above omitted 
    8798 Ignored bad PDB record found on line 112781 
    8799  
    8800  
    8801 Duplicate atom serial number found: 4775 
    8802 Duplicate atom serial number found: 4776 
    8803 Duplicate atom serial number found: 4777 
    8804 Duplicate atom serial number found: 4778 
    8805 Duplicate atom serial number found: 4779 
    8806 451 messages similar to the above omitted 
    8807 Ignored bad PDB record found on line 113239 
    8808  
    8809  
    8810 Duplicate atom serial number found: 5231 
    8811 Duplicate atom serial number found: 5232 
    8812 Duplicate atom serial number found: 5233 
    8813 Duplicate atom serial number found: 5234 
    8814 Duplicate atom serial number found: 5235 
    8815 384 messages similar to the above omitted 
    8816 Ignored bad PDB record found on line 113630 
    8817  
    8818  
    8819 Duplicate atom serial number found: 5620 
    8820 Duplicate atom serial number found: 5621 
    8821 Duplicate atom serial number found: 5622 
    8822 Duplicate atom serial number found: 5623 
    8823 Duplicate atom serial number found: 5624 
    8824 364 messages similar to the above omitted 
    8825 Ignored bad PDB record found on line 114001 
    8826  
    8827  
    8828 Duplicate atom serial number found: 1 
    8829 Duplicate atom serial number found: 2 
    8830 Duplicate atom serial number found: 3 
    8831 Duplicate atom serial number found: 4 
    8832 Duplicate atom serial number found: 5 
    8833 229 messages similar to the above omitted 
    8834 Ignored bad PDB record found on line 114237 
    8835  
    8836  
    8837 Duplicate atom serial number found: 235 
    8838 Duplicate atom serial number found: 236 
    8839 Duplicate atom serial number found: 237 
    8840 Duplicate atom serial number found: 238 
    8841 Duplicate atom serial number found: 239 
    8842 2492 messages similar to the above omitted 
    8843 Ignored bad PDB record found on line 116736 
    8844  
    8845  
    8846 Duplicate atom serial number found: 2732 
    8847 Duplicate atom serial number found: 2733 
    8848 Duplicate atom serial number found: 2734 
    8849 Duplicate atom serial number found: 2735 
    8850 Duplicate atom serial number found: 2736 
    8851 2038 messages similar to the above omitted 
    8852 Ignored bad PDB record found on line 118781 
    8853  
    8854  
    8855 Duplicate atom serial number found: 4775 
    8856 Duplicate atom serial number found: 4776 
    8857 Duplicate atom serial number found: 4777 
    8858 Duplicate atom serial number found: 4778 
    8859 Duplicate atom serial number found: 4779 
    8860 451 messages similar to the above omitted 
    8861 Ignored bad PDB record found on line 119239 
    8862  
    8863  
    8864 Duplicate atom serial number found: 5231 
    8865 Duplicate atom serial number found: 5232 
    8866 Duplicate atom serial number found: 5233 
    8867 Duplicate atom serial number found: 5234 
    8868 Duplicate atom serial number found: 5235 
    8869 384 messages similar to the above omitted 
    8870 Ignored bad PDB record found on line 119630 
    8871  
    8872  
    8873 Duplicate atom serial number found: 5620 
    8874 Duplicate atom serial number found: 5621 
    8875 Duplicate atom serial number found: 5622 
    8876 Duplicate atom serial number found: 5623 
    8877 Duplicate atom serial number found: 5624 
    8878 364 messages similar to the above omitted 
    8879 Ignored bad PDB record found on line 120001 
    8880  
    8881  
    8882 Duplicate atom serial number found: 1 
    8883 Duplicate atom serial number found: 2 
    8884 Duplicate atom serial number found: 3 
    8885 Duplicate atom serial number found: 4 
    8886 Duplicate atom serial number found: 5 
    8887 229 messages similar to the above omitted 
    8888 Ignored bad PDB record found on line 120237 
    8889  
    8890  
    8891 Duplicate atom serial number found: 235 
    8892 Duplicate atom serial number found: 236 
    8893 Duplicate atom serial number found: 237 
    8894 Duplicate atom serial number found: 238 
    8895 Duplicate atom serial number found: 239 
    8896 2492 messages similar to the above omitted 
    8897 Ignored bad PDB record found on line 122736 
    8898  
    8899  
    8900 Duplicate atom serial number found: 2732 
    8901 Duplicate atom serial number found: 2733 
    8902 Duplicate atom serial number found: 2734 
    8903 Duplicate atom serial number found: 2735 
    8904 Duplicate atom serial number found: 2736 
    8905 2038 messages similar to the above omitted 
    8906 Ignored bad PDB record found on line 124781 
    8907  
    8908  
    8909 Duplicate atom serial number found: 4775 
    8910 Duplicate atom serial number found: 4776 
    8911 Duplicate atom serial number found: 4777 
    8912 Duplicate atom serial number found: 4778 
    8913 Duplicate atom serial number found: 4779 
    8914 451 messages similar to the above omitted 
    8915 Ignored bad PDB record found on line 125239 
    8916  
    8917  
    8918 Duplicate atom serial number found: 5231 
    8919 Duplicate atom serial number found: 5232 
    8920 Duplicate atom serial number found: 5233 
    8921 Duplicate atom serial number found: 5234 
    8922 Duplicate atom serial number found: 5235 
    8923 384 messages similar to the above omitted 
    8924 Ignored bad PDB record found on line 125630 
    8925  
    8926  
    8927 Duplicate atom serial number found: 5620 
    8928 Duplicate atom serial number found: 5621 
    8929 Duplicate atom serial number found: 5622 
    8930 Duplicate atom serial number found: 5623 
    8931 Duplicate atom serial number found: 5624 
    8932 364 messages similar to the above omitted 
    8933 Ignored bad PDB record found on line 126001 
    8934  
    8935  
    8936 Duplicate atom serial number found: 1 
    8937 Duplicate atom serial number found: 2 
    8938 Duplicate atom serial number found: 3 
    8939 Duplicate atom serial number found: 4 
    8940 Duplicate atom serial number found: 5 
    8941 229 messages similar to the above omitted 
    8942 Ignored bad PDB record found on line 126237 
    8943  
    8944  
    8945 Duplicate atom serial number found: 235 
    8946 Duplicate atom serial number found: 236 
    8947 Duplicate atom serial number found: 237 
    8948 Duplicate atom serial number found: 238 
    8949 Duplicate atom serial number found: 239 
    8950 2492 messages similar to the above omitted 
    8951 Ignored bad PDB record found on line 128736 
    8952  
    8953  
    8954 Duplicate atom serial number found: 2732 
    8955 Duplicate atom serial number found: 2733 
    8956 Duplicate atom serial number found: 2734 
    8957 Duplicate atom serial number found: 2735 
    8958 Duplicate atom serial number found: 2736 
    8959 2038 messages similar to the above omitted 
    8960 Ignored bad PDB record found on line 130781 
    8961  
    8962  
    8963 Duplicate atom serial number found: 4775 
    8964 Duplicate atom serial number found: 4776 
    8965 Duplicate atom serial number found: 4777 
    8966 Duplicate atom serial number found: 4778 
    8967 Duplicate atom serial number found: 4779 
    8968 451 messages similar to the above omitted 
    8969 Ignored bad PDB record found on line 131239 
    8970  
    8971  
    8972 Duplicate atom serial number found: 5231 
    8973 Duplicate atom serial number found: 5232 
    8974 Duplicate atom serial number found: 5233 
    8975 Duplicate atom serial number found: 5234 
    8976 Duplicate atom serial number found: 5235 
    8977 384 messages similar to the above omitted 
    8978 Ignored bad PDB record found on line 131630 
    8979  
    8980  
    8981 Duplicate atom serial number found: 5620 
    8982 Duplicate atom serial number found: 5621 
    8983 Duplicate atom serial number found: 5622 
    8984 Duplicate atom serial number found: 5623 
    8985 Duplicate atom serial number found: 5624 
    8986 364 messages similar to the above omitted 
    8987 Ignored bad PDB record found on line 132001 
    8988  
    8989  
    8990 Duplicate atom serial number found: 1 
    8991 Duplicate atom serial number found: 2 
    8992 Duplicate atom serial number found: 3 
    8993 Duplicate atom serial number found: 4 
    8994 Duplicate atom serial number found: 5 
    8995 229 messages similar to the above omitted 
    8996 Ignored bad PDB record found on line 132237 
    8997  
    8998  
    8999 Duplicate atom serial number found: 235 
    9000 Duplicate atom serial number found: 236 
    9001 Duplicate atom serial number found: 237 
    9002 Duplicate atom serial number found: 238 
    9003 Duplicate atom serial number found: 239 
    9004 2492 messages similar to the above omitted 
    9005 Ignored bad PDB record found on line 134736 
    9006  
    9007  
    9008 Duplicate atom serial number found: 2732 
    9009 Duplicate atom serial number found: 2733 
    9010 Duplicate atom serial number found: 2734 
    9011 Duplicate atom serial number found: 2735 
    9012 Duplicate atom serial number found: 2736 
    9013 2038 messages similar to the above omitted 
    9014 Ignored bad PDB record found on line 136781 
    9015  
    9016  
    9017 Duplicate atom serial number found: 4775 
    9018 Duplicate atom serial number found: 4776 
    9019 Duplicate atom serial number found: 4777 
    9020 Duplicate atom serial number found: 4778 
    9021 Duplicate atom serial number found: 4779 
    9022 451 messages similar to the above omitted 
    9023 Ignored bad PDB record found on line 137239 
    9024  
    9025  
    9026 Duplicate atom serial number found: 5231 
    9027 Duplicate atom serial number found: 5232 
    9028 Duplicate atom serial number found: 5233 
    9029 Duplicate atom serial number found: 5234 
    9030 Duplicate atom serial number found: 5235 
    9031 384 messages similar to the above omitted 
    9032 Ignored bad PDB record found on line 137630 
    9033  
    9034  
    9035 Duplicate atom serial number found: 5620 
    9036 Duplicate atom serial number found: 5621 
    9037 Duplicate atom serial number found: 5622 
    9038 Duplicate atom serial number found: 5623 
    9039 Duplicate atom serial number found: 5624 
    9040 364 messages similar to the above omitted 
    9041 Ignored bad PDB record found on line 138001 
    9042  
    9043  
    9044 Duplicate atom serial number found: 1 
    9045 Duplicate atom serial number found: 2 
    9046 Duplicate atom serial number found: 3 
    9047 Duplicate atom serial number found: 4 
    9048 Duplicate atom serial number found: 5 
    9049 229 messages similar to the above omitted 
    9050 Ignored bad PDB record found on line 138237 
    9051  
    9052  
    9053 Duplicate atom serial number found: 235 
    9054 Duplicate atom serial number found: 236 
    9055 Duplicate atom serial number found: 237 
    9056 Duplicate atom serial number found: 238 
    9057 Duplicate atom serial number found: 239 
    9058 2492 messages similar to the above omitted 
    9059 Ignored bad PDB record found on line 140736 
    9060  
    9061  
    9062 Duplicate atom serial number found: 2732 
    9063 Duplicate atom serial number found: 2733 
    9064 Duplicate atom serial number found: 2734 
    9065 Duplicate atom serial number found: 2735 
    9066 Duplicate atom serial number found: 2736 
    9067 2038 messages similar to the above omitted 
    9068 Ignored bad PDB record found on line 142781 
    9069  
    9070  
    9071 Duplicate atom serial number found: 4775 
    9072 Duplicate atom serial number found: 4776 
    9073 Duplicate atom serial number found: 4777 
    9074 Duplicate atom serial number found: 4778 
    9075 Duplicate atom serial number found: 4779 
    9076 451 messages similar to the above omitted 
    9077 Ignored bad PDB record found on line 143239 
    9078  
    9079  
    9080 Duplicate atom serial number found: 5231 
    9081 Duplicate atom serial number found: 5232 
    9082 Duplicate atom serial number found: 5233 
    9083 Duplicate atom serial number found: 5234 
    9084 Duplicate atom serial number found: 5235 
    9085 384 messages similar to the above omitted 
    9086 Ignored bad PDB record found on line 143630 
    9087  
    9088  
    9089 Duplicate atom serial number found: 5620 
    9090 Duplicate atom serial number found: 5621 
    9091 Duplicate atom serial number found: 5622 
    9092 Duplicate atom serial number found: 5623 
    9093 Duplicate atom serial number found: 5624 
    9094 364 messages similar to the above omitted 
    9095 Ignored bad PDB record found on line 144001 
    9096  
    9097  
    9098 Duplicate atom serial number found: 1 
    9099 Duplicate atom serial number found: 2 
    9100 Duplicate atom serial number found: 3 
    9101 Duplicate atom serial number found: 4 
    9102 Duplicate atom serial number found: 5 
    9103 229 messages similar to the above omitted 
    9104 Ignored bad PDB record found on line 144237 
    9105  
    9106  
    9107 Duplicate atom serial number found: 235 
    9108 Duplicate atom serial number found: 236 
    9109 Duplicate atom serial number found: 237 
    9110 Duplicate atom serial number found: 238 
    9111 Duplicate atom serial number found: 239 
    9112 2492 messages similar to the above omitted 
    9113 Ignored bad PDB record found on line 146736 
    9114  
    9115  
    9116 Duplicate atom serial number found: 2732 
    9117 Duplicate atom serial number found: 2733 
    9118 Duplicate atom serial number found: 2734 
    9119 Duplicate atom serial number found: 2735 
    9120 Duplicate atom serial number found: 2736 
    9121 2038 messages similar to the above omitted 
    9122 Ignored bad PDB record found on line 148781 
    9123  
    9124  
    9125 Duplicate atom serial number found: 4775 
    9126 Duplicate atom serial number found: 4776 
    9127 Duplicate atom serial number found: 4777 
    9128 Duplicate atom serial number found: 4778 
    9129 Duplicate atom serial number found: 4779 
    9130 451 messages similar to the above omitted 
    9131 Ignored bad PDB record found on line 149239 
    9132  
    9133  
    9134 Duplicate atom serial number found: 5231 
    9135 Duplicate atom serial number found: 5232 
    9136 Duplicate atom serial number found: 5233 
    9137 Duplicate atom serial number found: 5234 
    9138 Duplicate atom serial number found: 5235 
    9139 384 messages similar to the above omitted 
    9140 Ignored bad PDB record found on line 149630 
    9141  
    9142  
    9143 Duplicate atom serial number found: 5620 
    9144 Duplicate atom serial number found: 5621 
    9145 Duplicate atom serial number found: 5622 
    9146 Duplicate atom serial number found: 5623 
    9147 Duplicate atom serial number found: 5624 
    9148 364 messages similar to the above omitted 
    9149 Ignored bad PDB record found on line 150001 
    9150  
    9151  
    9152 Duplicate atom serial number found: 1 
    9153 Duplicate atom serial number found: 2 
    9154 Duplicate atom serial number found: 3 
    9155 Duplicate atom serial number found: 4 
    9156 Duplicate atom serial number found: 5 
    9157 229 messages similar to the above omitted 
    9158 Ignored bad PDB record found on line 150237 
    9159  
    9160  
    9161 Duplicate atom serial number found: 235 
    9162 Duplicate atom serial number found: 236 
    9163 Duplicate atom serial number found: 237 
    9164 Duplicate atom serial number found: 238 
    9165 Duplicate atom serial number found: 239 
    9166 2492 messages similar to the above omitted 
    9167 Ignored bad PDB record found on line 152736 
    9168  
    9169  
    9170 Duplicate atom serial number found: 2732 
    9171 Duplicate atom serial number found: 2733 
    9172 Duplicate atom serial number found: 2734 
    9173 Duplicate atom serial number found: 2735 
    9174 Duplicate atom serial number found: 2736 
    9175 2038 messages similar to the above omitted 
    9176 Ignored bad PDB record found on line 154781 
    9177  
    9178  
    9179 Duplicate atom serial number found: 4775 
    9180 Duplicate atom serial number found: 4776 
    9181 Duplicate atom serial number found: 4777 
    9182 Duplicate atom serial number found: 4778 
    9183 Duplicate atom serial number found: 4779 
    9184 451 messages similar to the above omitted 
    9185 Ignored bad PDB record found on line 155239 
    9186  
    9187  
    9188 Duplicate atom serial number found: 5231 
    9189 Duplicate atom serial number found: 5232 
    9190 Duplicate atom serial number found: 5233 
    9191 Duplicate atom serial number found: 5234 
    9192 Duplicate atom serial number found: 5235 
    9193 384 messages similar to the above omitted 
    9194 Ignored bad PDB record found on line 155630 
    9195  
    9196  
    9197 Duplicate atom serial number found: 5620 
    9198 Duplicate atom serial number found: 5621 
    9199 Duplicate atom serial number found: 5622 
    9200 Duplicate atom serial number found: 5623 
    9201 Duplicate atom serial number found: 5624 
    9202 364 messages similar to the above omitted 
    9203 Ignored bad PDB record found on line 156001 
    9204  
    9205  
    9206 Duplicate atom serial number found: 1 
    9207 Duplicate atom serial number found: 2 
    9208 Duplicate atom serial number found: 3 
    9209 Duplicate atom serial number found: 4 
    9210 Duplicate atom serial number found: 5 
    9211 229 messages similar to the above omitted 
    9212 Ignored bad PDB record found on line 156237 
    9213  
    9214  
    9215 Duplicate atom serial number found: 235 
    9216 Duplicate atom serial number found: 236 
    9217 Duplicate atom serial number found: 237 
    9218 Duplicate atom serial number found: 238 
    9219 Duplicate atom serial number found: 239 
    9220 2492 messages similar to the above omitted 
    9221 Ignored bad PDB record found on line 158736 
    9222  
    9223  
    9224 Duplicate atom serial number found: 2732 
    9225 Duplicate atom serial number found: 2733 
    9226 Duplicate atom serial number found: 2734 
    9227 Duplicate atom serial number found: 2735 
    9228 Duplicate atom serial number found: 2736 
    9229 2038 messages similar to the above omitted 
    9230 Ignored bad PDB record found on line 160781 
    9231  
    9232  
    9233 Duplicate atom serial number found: 4775 
    9234 Duplicate atom serial number found: 4776 
    9235 Duplicate atom serial number found: 4777 
    9236 Duplicate atom serial number found: 4778 
    9237 Duplicate atom serial number found: 4779 
    9238 451 messages similar to the above omitted 
    9239 Ignored bad PDB record found on line 161239 
    9240  
    9241  
    9242 Duplicate atom serial number found: 5231 
    9243 Duplicate atom serial number found: 5232 
    9244 Duplicate atom serial number found: 5233 
    9245 Duplicate atom serial number found: 5234 
    9246 Duplicate atom serial number found: 5235 
    9247 384 messages similar to the above omitted 
    9248 Ignored bad PDB record found on line 161630 
    9249  
    9250  
    9251 Duplicate atom serial number found: 5620 
    9252 Duplicate atom serial number found: 5621 
    9253 Duplicate atom serial number found: 5622 
    9254 Duplicate atom serial number found: 5623 
    9255 Duplicate atom serial number found: 5624 
    9256 364 messages similar to the above omitted 
    9257 Ignored bad PDB record found on line 162001 
    9258  
    9259  
    9260 Duplicate atom serial number found: 1 
    9261 Duplicate atom serial number found: 2 
    9262 Duplicate atom serial number found: 3 
    9263 Duplicate atom serial number found: 4 
    9264 Duplicate atom serial number found: 5 
    9265 229 messages similar to the above omitted 
    9266 Ignored bad PDB record found on line 162237 
    9267  
    9268  
    9269 Duplicate atom serial number found: 235 
    9270 Duplicate atom serial number found: 236 
    9271 Duplicate atom serial number found: 237 
    9272 Duplicate atom serial number found: 238 
    9273 Duplicate atom serial number found: 239 
    9274 2492 messages similar to the above omitted 
    9275 Ignored bad PDB record found on line 164736 
    9276  
    9277  
    9278 Duplicate atom serial number found: 2732 
    9279 Duplicate atom serial number found: 2733 
    9280 Duplicate atom serial number found: 2734 
    9281 Duplicate atom serial number found: 2735 
    9282 Duplicate atom serial number found: 2736 
    9283 2038 messages similar to the above omitted 
    9284 Ignored bad PDB record found on line 166781 
    9285  
    9286  
    9287 Duplicate atom serial number found: 4775 
    9288 Duplicate atom serial number found: 4776 
    9289 Duplicate atom serial number found: 4777 
    9290 Duplicate atom serial number found: 4778 
    9291 Duplicate atom serial number found: 4779 
    9292 451 messages similar to the above omitted 
    9293 Ignored bad PDB record found on line 167239 
    9294  
    9295  
    9296 Duplicate atom serial number found: 5231 
    9297 Duplicate atom serial number found: 5232 
    9298 Duplicate atom serial number found: 5233 
    9299 Duplicate atom serial number found: 5234 
    9300 Duplicate atom serial number found: 5235 
    9301 384 messages similar to the above omitted 
    9302 Ignored bad PDB record found on line 167630 
    9303  
    9304  
    9305 Duplicate atom serial number found: 5620 
    9306 Duplicate atom serial number found: 5621 
    9307 Duplicate atom serial number found: 5622 
    9308 Duplicate atom serial number found: 5623 
    9309 Duplicate atom serial number found: 5624 
    9310 364 messages similar to the above omitted 
    9311 Ignored bad PDB record found on line 168001 
    9312  
    9313  
    9314 Duplicate atom serial number found: 1 
    9315 Duplicate atom serial number found: 2 
    9316 Duplicate atom serial number found: 3 
    9317 Duplicate atom serial number found: 4 
    9318 Duplicate atom serial number found: 5 
    9319 229 messages similar to the above omitted 
    9320 Ignored bad PDB record found on line 168237 
    9321  
    9322  
    9323 Duplicate atom serial number found: 235 
    9324 Duplicate atom serial number found: 236 
    9325 Duplicate atom serial number found: 237 
    9326 Duplicate atom serial number found: 238 
    9327 Duplicate atom serial number found: 239 
    9328 2492 messages similar to the above omitted 
    9329 Ignored bad PDB record found on line 170736 
    9330  
    9331  
    9332 Duplicate atom serial number found: 2732 
    9333 Duplicate atom serial number found: 2733 
    9334 Duplicate atom serial number found: 2734 
    9335 Duplicate atom serial number found: 2735 
    9336 Duplicate atom serial number found: 2736 
    9337 2038 messages similar to the above omitted 
    9338 Ignored bad PDB record found on line 172781 
    9339  
    9340  
    9341 Duplicate atom serial number found: 4775 
    9342 Duplicate atom serial number found: 4776 
    9343 Duplicate atom serial number found: 4777 
    9344 Duplicate atom serial number found: 4778 
    9345 Duplicate atom serial number found: 4779 
    9346 451 messages similar to the above omitted 
    9347 Ignored bad PDB record found on line 173239 
    9348  
    9349  
    9350 Duplicate atom serial number found: 5231 
    9351 Duplicate atom serial number found: 5232 
    9352 Duplicate atom serial number found: 5233 
    9353 Duplicate atom serial number found: 5234 
    9354 Duplicate atom serial number found: 5235 
    9355 384 messages similar to the above omitted 
    9356 Ignored bad PDB record found on line 173630 
    9357  
    9358  
    9359 Duplicate atom serial number found: 5620 
    9360 Duplicate atom serial number found: 5621 
    9361 Duplicate atom serial number found: 5622 
    9362 Duplicate atom serial number found: 5623 
    9363 Duplicate atom serial number found: 5624 
    9364 364 messages similar to the above omitted 
    9365 Ignored bad PDB record found on line 174001 
    9366  
    9367  
    9368 Duplicate atom serial number found: 1 
    9369 Duplicate atom serial number found: 2 
    9370 Duplicate atom serial number found: 3 
    9371 Duplicate atom serial number found: 4 
    9372 Duplicate atom serial number found: 5 
    9373 229 messages similar to the above omitted 
    9374 Ignored bad PDB record found on line 174237 
    9375  
    9376  
    9377 Duplicate atom serial number found: 235 
    9378 Duplicate atom serial number found: 236 
    9379 Duplicate atom serial number found: 237 
    9380 Duplicate atom serial number found: 238 
    9381 Duplicate atom serial number found: 239 
    9382 2492 messages similar to the above omitted 
    9383 Ignored bad PDB record found on line 176736 
    9384  
    9385  
    9386 Duplicate atom serial number found: 2732 
    9387 Duplicate atom serial number found: 2733 
    9388 Duplicate atom serial number found: 2734 
    9389 Duplicate atom serial number found: 2735 
    9390 Duplicate atom serial number found: 2736 
    9391 2038 messages similar to the above omitted 
    9392 Ignored bad PDB record found on line 178781 
    9393  
    9394  
    9395 Duplicate atom serial number found: 4775 
    9396 Duplicate atom serial number found: 4776 
    9397 Duplicate atom serial number found: 4777 
    9398 Duplicate atom serial number found: 4778 
    9399 Duplicate atom serial number found: 4779 
    9400 451 messages similar to the above omitted 
    9401 Ignored bad PDB record found on line 179239 
    9402  
    9403  
    9404 Duplicate atom serial number found: 5231 
    9405 Duplicate atom serial number found: 5232 
    9406 Duplicate atom serial number found: 5233 
    9407 Duplicate atom serial number found: 5234 
    9408 Duplicate atom serial number found: 5235 
    9409 384 messages similar to the above omitted 
    9410 Ignored bad PDB record found on line 179630 
    9411  
    9412  
    9413 Duplicate atom serial number found: 5620 
    9414 Duplicate atom serial number found: 5621 
    9415 Duplicate atom serial number found: 5622 
    9416 Duplicate atom serial number found: 5623 
    9417 Duplicate atom serial number found: 5624 
    9418 364 messages similar to the above omitted 
    9419 Ignored bad PDB record found on line 180001 
    9420  
    9421  
    9422 Duplicate atom serial number found: 1 
    9423 Duplicate atom serial number found: 2 
    9424 Duplicate atom serial number found: 3 
    9425 Duplicate atom serial number found: 4 
    9426 Duplicate atom serial number found: 5 
    9427 229 messages similar to the above omitted 
    9428 Ignored bad PDB record found on line 180237 
    9429  
    9430  
    9431 Duplicate atom serial number found: 235 
    9432 Duplicate atom serial number found: 236 
    9433 Duplicate atom serial number found: 237 
    9434 Duplicate atom serial number found: 238 
    9435 Duplicate atom serial number found: 239 
    9436 2492 messages similar to the above omitted 
    9437 Ignored bad PDB record found on line 182736 
    9438  
    9439  
    9440 Duplicate atom serial number found: 2732 
    9441 Duplicate atom serial number found: 2733 
    9442 Duplicate atom serial number found: 2734 
    9443 Duplicate atom serial number found: 2735 
    9444 Duplicate atom serial number found: 2736 
    9445 2038 messages similar to the above omitted 
    9446 Ignored bad PDB record found on line 184781 
    9447  
    9448  
    9449 Duplicate atom serial number found: 4775 
    9450 Duplicate atom serial number found: 4776 
    9451 Duplicate atom serial number found: 4777 
    9452 Duplicate atom serial number found: 4778 
    9453 Duplicate atom serial number found: 4779 
    9454 451 messages similar to the above omitted 
    9455 Ignored bad PDB record found on line 185239 
    9456  
    9457  
    9458 Duplicate atom serial number found: 5231 
    9459 Duplicate atom serial number found: 5232 
    9460 Duplicate atom serial number found: 5233 
    9461 Duplicate atom serial number found: 5234 
    9462 Duplicate atom serial number found: 5235 
    9463 384 messages similar to the above omitted 
    9464 Ignored bad PDB record found on line 185630 
    9465  
    9466  
    9467 Duplicate atom serial number found: 5620 
    9468 Duplicate atom serial number found: 5621 
    9469 Duplicate atom serial number found: 5622 
    9470 Duplicate atom serial number found: 5623 
    9471 Duplicate atom serial number found: 5624 
    9472 364 messages similar to the above omitted 
    9473 Ignored bad PDB record found on line 186001 
    9474  
    9475  
    9476 Duplicate atom serial number found: 1 
    9477 Duplicate atom serial number found: 2 
    9478 Duplicate atom serial number found: 3 
    9479 Duplicate atom serial number found: 4 
    9480 Duplicate atom serial number found: 5 
    9481 229 messages similar to the above omitted 
    9482 Ignored bad PDB record found on line 186237 
    9483  
    9484  
    9485 Duplicate atom serial number found: 235 
    9486 Duplicate atom serial number found: 236 
    9487 Duplicate atom serial number found: 237 
    9488 Duplicate atom serial number found: 238 
    9489 Duplicate atom serial number found: 239 
    9490 2492 messages similar to the above omitted 
    9491 Ignored bad PDB record found on line 188736 
    9492  
    9493  
    9494 Duplicate atom serial number found: 2732 
    9495 Duplicate atom serial number found: 2733 
    9496 Duplicate atom serial number found: 2734 
    9497 Duplicate atom serial number found: 2735 
    9498 Duplicate atom serial number found: 2736 
    9499 2038 messages similar to the above omitted 
    9500 Ignored bad PDB record found on line 190781 
    9501  
    9502  
    9503 Duplicate atom serial number found: 4775 
    9504 Duplicate atom serial number found: 4776 
    9505 Duplicate atom serial number found: 4777 
    9506 Duplicate atom serial number found: 4778 
    9507 Duplicate atom serial number found: 4779 
    9508 451 messages similar to the above omitted 
    9509 Ignored bad PDB record found on line 191239 
    9510  
    9511  
    9512 Duplicate atom serial number found: 5231 
    9513 Duplicate atom serial number found: 5232 
    9514 Duplicate atom serial number found: 5233 
    9515 Duplicate atom serial number found: 5234 
    9516 Duplicate atom serial number found: 5235 
    9517 384 messages similar to the above omitted 
    9518 Ignored bad PDB record found on line 191630 
    9519  
    9520  
    9521 Duplicate atom serial number found: 5620 
    9522 Duplicate atom serial number found: 5621 
    9523 Duplicate atom serial number found: 5622 
    9524 Duplicate atom serial number found: 5623 
    9525 Duplicate atom serial number found: 5624 
    9526 364 messages similar to the above omitted 
    9527 Ignored bad PDB record found on line 192001 
    9528  
    9529  
    9530 Duplicate atom serial number found: 1 
    9531 Duplicate atom serial number found: 2 
    9532 Duplicate atom serial number found: 3 
    9533 Duplicate atom serial number found: 4 
    9534 Duplicate atom serial number found: 5 
    9535 229 messages similar to the above omitted 
    9536 Ignored bad PDB record found on line 192237 
    9537  
    9538  
    9539 Duplicate atom serial number found: 235 
    9540 Duplicate atom serial number found: 236 
    9541 Duplicate atom serial number found: 237 
    9542 Duplicate atom serial number found: 238 
    9543 Duplicate atom serial number found: 239 
    9544 2492 messages similar to the above omitted 
    9545 Ignored bad PDB record found on line 194736 
    9546  
    9547  
    9548 Duplicate atom serial number found: 2732 
    9549 Duplicate atom serial number found: 2733 
    9550 Duplicate atom serial number found: 2734 
    9551 Duplicate atom serial number found: 2735 
    9552 Duplicate atom serial number found: 2736 
    9553 2038 messages similar to the above omitted 
    9554 Ignored bad PDB record found on line 196781 
    9555  
    9556  
    9557 Duplicate atom serial number found: 4775 
    9558 Duplicate atom serial number found: 4776 
    9559 Duplicate atom serial number found: 4777 
    9560 Duplicate atom serial number found: 4778 
    9561 Duplicate atom serial number found: 4779 
    9562 451 messages similar to the above omitted 
    9563 Ignored bad PDB record found on line 197239 
    9564  
    9565  
    9566 Duplicate atom serial number found: 5231 
    9567 Duplicate atom serial number found: 5232 
    9568 Duplicate atom serial number found: 5233 
    9569 Duplicate atom serial number found: 5234 
    9570 Duplicate atom serial number found: 5235 
    9571 384 messages similar to the above omitted 
    9572 Ignored bad PDB record found on line 197630 
    9573  
    9574  
    9575 Duplicate atom serial number found: 5620 
    9576 Duplicate atom serial number found: 5621 
    9577 Duplicate atom serial number found: 5622 
    9578 Duplicate atom serial number found: 5623 
    9579 Duplicate atom serial number found: 5624 
    9580 364 messages similar to the above omitted 
    9581 Ignored bad PDB record found on line 198001 
    9582  
    9583  
    9584 Duplicate atom serial number found: 1 
    9585 Duplicate atom serial number found: 2 
    9586 Duplicate atom serial number found: 3 
    9587 Duplicate atom serial number found: 4 
    9588 Duplicate atom serial number found: 5 
    9589 229 messages similar to the above omitted 
    9590 Ignored bad PDB record found on line 198237 
    9591  
    9592  
    9593 Duplicate atom serial number found: 235 
    9594 Duplicate atom serial number found: 236 
    9595 Duplicate atom serial number found: 237 
    9596 Duplicate atom serial number found: 238 
    9597 Duplicate atom serial number found: 239 
    9598 2492 messages similar to the above omitted 
    9599 Ignored bad PDB record found on line 200736 
    9600  
    9601  
    9602 Duplicate atom serial number found: 2732 
    9603 Duplicate atom serial number found: 2733 
    9604 Duplicate atom serial number found: 2734 
    9605 Duplicate atom serial number found: 2735 
    9606 Duplicate atom serial number found: 2736 
    9607 2038 messages similar to the above omitted 
    9608 Ignored bad PDB record found on line 202781 
    9609  
    9610  
    9611 Duplicate atom serial number found: 4775 
    9612 Duplicate atom serial number found: 4776 
    9613 Duplicate atom serial number found: 4777 
    9614 Duplicate atom serial number found: 4778 
    9615 Duplicate atom serial number found: 4779 
    9616 451 messages similar to the above omitted 
    9617 Ignored bad PDB record found on line 203239 
    9618  
    9619  
    9620 Duplicate atom serial number found: 5231 
    9621 Duplicate atom serial number found: 5232 
    9622 Duplicate atom serial number found: 5233 
    9623 Duplicate atom serial number found: 5234 
    9624 Duplicate atom serial number found: 5235 
    9625 384 messages similar to the above omitted 
    9626 Ignored bad PDB record found on line 203630 
    9627  
    9628  
    9629 Duplicate atom serial number found: 5620 
    9630 Duplicate atom serial number found: 5621 
    9631 Duplicate atom serial number found: 5622 
    9632 Duplicate atom serial number found: 5623 
    9633 Duplicate atom serial number found: 5624 
    9634 364 messages similar to the above omitted 
    9635 Ignored bad PDB record found on line 204001 
    9636  
    9637  
    9638 Ignored bad PDB record found on line 204002 
    9639  
    9640 Chain information for NoDensity_PAA_apply_ncs_20.pdb #1 
    9641 --- 
    9642 Chain | Description 
    9643 A BC BF DB DE F FA FD FG HC HF I JB JE LA LD LG NC NF PB PE RA RD RG S TC TF
    9644 VB VE XA XD Z ZC ZF | No description available 
    9645 AA AD AG B CC CF EB EE G GA GD GG IC IF J KB KE MA MD MG OC OF QB QE SA SD SG
    9646 T UC UF WB WE YA YD | No description available 
    9647 AB AE CA CD CG D EC EF GB GE IA ID IG KC KF L MB ME N OA OD OG QC QF SB SE UA
    9648 UD UG W WC WF YB YE | No description available 
    9649 AC AF CB CE EA ED EG GC GF H IB IE KA KD KG MC MF OB OE Q QA QD QG R SC SF UB
    9650 UE WA WD WG Y YC YF | No description available 
    9651 BA BD BG C DC DF FB FE HA HD HG JC JF K LB LE M NA ND NG PC PF RB RE TA TD TG
    9652 V VC VF XB XE ZA ZD | No description available 
    9653 BB BE DA DD DG E FC FF HB HE JA JD JG LC LF NB NE O P PA PD PG RC RF TB TE VA
    9654 VD VG X XC XF ZB ZE | No description available 
    9655  
    9656 
    9657 > select /f/g/m/n/p/q
    9658 
    9659 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    9660 
    9661 > select ~sel & ##selected
    9662 
    9663 197604 atoms, 199320 bonds, 29700 residues, 1 model selected 
    9664 
    9665 > delete sel
    9666 
    9667 > select /f
    9668 
    9669 234 atoms, 233 bonds, 47 residues, 1 model selected 
    9670 
    9671 > color #1 #0f98f7ff
    9672 
    9673 > show sel cartoons
    9674 
    9675 > select add #1
    9676 
    9677 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    9678 
    9679 > show sel cartoons
    9680 
    9681 > hide sel atoms
    9682 
    9683 > color #1 darkgrey
    9684 
    9685 > color #1 silver
    9686 
    9687 > color #1 darkgrey
    9688 
    9689 > cartoon style width 2.8 thickness 1.2
    9690 
    9691 > select subtract #1
    9692 
    9693 Nothing selected 
    9694 
    9695 > select add #1
    9696 
    9697 5988 atoms, 6040 bonds, 900 residues, 1 model selected 
    9698 
    9699 > transparency #1 100 target c.
    9700 
    9701 Invalid "target" argument: Character '.' is not an allowed target, must be one
    9702 of acrsbmpfl 
    9703 
    9704 > transparency #1 100 target c
    9705 
    9706 > select /m:44-74
    9707 
    9708 242 atoms, 244 bonds, 31 residues, 1 model selected 
    9709 
    9710 > color sequential polymers target c palette blue:cyan
    9711 
    9712 > transparency /m:44-74 0 target c
    9713 
    9714 > lighting soft
    9715 
    9716 Fetching compressed palette blue-cyan from
    9717 https://www.colourlovers.com/api/palettes?keywords=blue-
    9718 cyan&format=json&numResults=100 
    9719 Could not find palette blue-cyan at COLOURlovers.com using keyword search 
    9720 
    9721 > color sequential polymers target c palette alphafold
    9722 
    9723 > color sequential polymers target c palette alphafold 100
    9724 
    9725 Expected a keyword 
    9726 Fetching compressed palette pastel204 from
    9727 https://www.colourlovers.com/api/palettes?keywords=pastel204&format=json&numResults=100 
    9728 Could not find palette pastel204 at COLOURlovers.com using keyword search 
    9729 
    9730 > color sequential polymers target c palette pastel2-4
    9731 
    9732 > color sequential polymers target c palette redblue
    9733 
    9734 > open "/Users/prash_mbp/Dropbox (VU Basic Sciences)/[FiguresOnly__C-
    9735 > ring]/Mutations, Maps and Models/CW_C-
    9736 > ring_Phenix/ApplyNCS_20/NoDensity_PAA_apply_ncs_20.pdb"
    9737 
    9738 Summary of feedback from opening /Users/prash_mbp/Dropbox (VU Basic
    9739 Sciences)/[FiguresOnly__C-ring]/Mutations, Maps and Models/CW_C-
    9740 ring_Phenix/ApplyNCS_20/NoDensity_PAA_apply_ncs_20.pdb 
    9741 --- 
    9742 warnings | Ignored bad PDB record found on line 237 
    9743  
    9744  
    9745 Ignored bad PDB record found on line 2736 
    9746  
    9747  
    9748 Ignored bad PDB record found on line 4781 
    9749  
    9750  
    9751 Ignored bad PDB record found on line 5239 
    9752  
    9753  
    9754 Ignored bad PDB record found on line 5630 
    9755  
    9756  
    9757 1 messages similar to the above omitted 
    9758 Duplicate atom serial number found: 1 
    9759 Duplicate atom serial number found: 2 
    9760 Duplicate atom serial number found: 3 
    9761 Duplicate atom serial number found: 4 
    9762 Duplicate atom serial number found: 5 
    9763 229 messages similar to the above omitted 
    9764 Ignored bad PDB record found on line 6237 
    9765  
    9766  
    9767 Duplicate atom serial number found: 235 
    9768 Duplicate atom serial number found: 236 
    9769 Duplicate atom serial number found: 237 
    9770 Duplicate atom serial number found: 238 
    9771 Duplicate atom serial number found: 239 
    9772 2492 messages similar to the above omitted 
    9773 Ignored bad PDB record found on line 8736 
    9774  
    9775  
    9776 Duplicate atom serial number found: 2732 
    9777 Duplicate atom serial number found: 2733 
    9778 Duplicate atom serial number found: 2734 
    9779 Duplicate atom serial number found: 2735 
    9780 Duplicate atom serial number found: 2736 
    9781 2038 messages similar to the above omitted 
    9782 Ignored bad PDB record found on line 10781 
    9783  
    9784  
    9785 Duplicate atom serial number found: 4775 
    9786 Duplicate atom serial number found: 4776 
    9787 Duplicate atom serial number found: 4777 
    9788 Duplicate atom serial number found: 4778 
    9789 Duplicate atom serial number found: 4779 
    9790 451 messages similar to the above omitted 
    9791 Ignored bad PDB record found on line 11239 
    9792  
    9793  
    9794 Duplicate atom serial number found: 5231 
    9795 Duplicate atom serial number found: 5232 
    9796 Duplicate atom serial number found: 5233 
    9797 Duplicate atom serial number found: 5234 
    9798 Duplicate atom serial number found: 5235 
    9799 384 messages similar to the above omitted 
    9800 Ignored bad PDB record found on line 11630 
    9801  
    9802  
    9803 Duplicate atom serial number found: 5620 
    9804 Duplicate atom serial number found: 5621 
    9805 Duplicate atom serial number found: 5622 
    9806 Duplicate atom serial number found: 5623 
    9807 Duplicate atom serial number found: 5624 
    9808 364 messages similar to the above omitted 
    9809 Ignored bad PDB record found on line 12001 
    9810  
    9811  
    9812 Duplicate atom serial number found: 1 
    9813 Duplicate atom serial number found: 2 
    9814 Duplicate atom serial number found: 3 
    9815 Duplicate atom serial number found: 4 
    9816 Duplicate atom serial number found: 5 
    9817 229 messages similar to the above omitted 
    9818 Ignored bad PDB record found on line 12237 
    9819  
    9820  
    9821 Duplicate atom serial number found: 235 
    9822 Duplicate atom serial number found: 236 
    9823 Duplicate atom serial number found: 237 
    9824 Duplicate atom serial number found: 238 
    9825 Duplicate atom serial number found: 239 
    9826 2492 messages similar to the above omitted 
    9827 Ignored bad PDB record found on line 14736 
    9828  
    9829  
    9830 Duplicate atom serial number found: 2732 
    9831 Duplicate atom serial number found: 2733 
    9832 Duplicate atom serial number found: 2734 
    9833 Duplicate atom serial number found: 2735 
    9834 Duplicate atom serial number found: 2736 
    9835 2038 messages similar to the above omitted 
    9836 Ignored bad PDB record found on line 16781 
    9837  
    9838  
    9839 Duplicate atom serial number found: 4775 
    9840 Duplicate atom serial number found: 4776 
    9841 Duplicate atom serial number found: 4777 
    9842 Duplicate atom serial number found: 4778 
    9843 Duplicate atom serial number found: 4779 
    9844 451 messages similar to the above omitted 
    9845 Ignored bad PDB record found on line 17239 
    9846  
    9847  
    9848 Duplicate atom serial number found: 5231 
    9849 Duplicate atom serial number found: 5232 
    9850 Duplicate atom serial number found: 5233 
    9851 Duplicate atom serial number found: 5234 
    9852 Duplicate atom serial number found: 5235 
    9853 384 messages similar to the above omitted 
    9854 Ignored bad PDB record found on line 17630 
    9855  
    9856  
    9857 Duplicate atom serial number found: 5620 
    9858 Duplicate atom serial number found: 5621 
    9859 Duplicate atom serial number found: 5622 
    9860 Duplicate atom serial number found: 5623 
    9861 Duplicate atom serial number found: 5624 
    9862 364 messages similar to the above omitted 
    9863 Ignored bad PDB record found on line 18001 
    9864  
    9865  
    9866 Duplicate atom serial number found: 1 
    9867 Duplicate atom serial number found: 2 
    9868 Duplicate atom serial number found: 3 
    9869 Duplicate atom serial number found: 4 
    9870 Duplicate atom serial number found: 5 
    9871 229 messages similar to the above omitted 
    9872 Ignored bad PDB record found on line 18237 
    9873  
    9874  
    9875 Duplicate atom serial number found: 235 
    9876 Duplicate atom serial number found: 236 
    9877 Duplicate atom serial number found: 237 
    9878 Duplicate atom serial number found: 238 
    9879 Duplicate atom serial number found: 239 
    9880 2492 messages similar to the above omitted 
    9881 Ignored bad PDB record found on line 20736 
    9882  
    9883  
    9884 Duplicate atom serial number found: 2732 
    9885 Duplicate atom serial number found: 2733 
    9886 Duplicate atom serial number found: 2734 
    9887 Duplicate atom serial number found: 2735 
    9888 Duplicate atom serial number found: 2736 
    9889 2038 messages similar to the above omitted 
    9890 Ignored bad PDB record found on line 22781 
    9891  
    9892  
    9893 Duplicate atom serial number found: 4775 
    9894 Duplicate atom serial number found: 4776 
    9895 Duplicate atom serial number found: 4777 
    9896 Duplicate atom serial number found: 4778 
    9897 Duplicate atom serial number found: 4779 
    9898 451 messages similar to the above omitted 
    9899 Ignored bad PDB record found on line 23239 
    9900  
    9901  
    9902 Duplicate atom serial number found: 5231 
    9903 Duplicate atom serial number found: 5232 
    9904 Duplicate atom serial number found: 5233 
    9905 Duplicate atom serial number found: 5234 
    9906 Duplicate atom serial number found: 5235 
    9907 384 messages similar to the above omitted 
    9908 Ignored bad PDB record found on line 23630 
    9909  
    9910  
    9911 Duplicate atom serial number found: 5620 
    9912 Duplicate atom serial number found: 5621 
    9913 Duplicate atom serial number found: 5622 
    9914 Duplicate atom serial number found: 5623 
    9915 Duplicate atom serial number found: 5624 
    9916 364 messages similar to the above omitted 
    9917 Ignored bad PDB record found on line 24001 
    9918  
    9919  
    9920 Duplicate atom serial number found: 1 
    9921 Duplicate atom serial number found: 2 
    9922 Duplicate atom serial number found: 3 
    9923 Duplicate atom serial number found: 4 
    9924 Duplicate atom serial number found: 5 
    9925 229 messages similar to the above omitted 
    9926 Ignored bad PDB record found on line 24237 
    9927  
    9928  
    9929 Duplicate atom serial number found: 235 
    9930 Duplicate atom serial number found: 236 
    9931 Duplicate atom serial number found: 237 
    9932 Duplicate atom serial number found: 238 
    9933 Duplicate atom serial number found: 239 
    9934 2492 messages similar to the above omitted 
    9935 Ignored bad PDB record found on line 26736 
    9936  
    9937  
    9938 Duplicate atom serial number found: 2732 
    9939 Duplicate atom serial number found: 2733 
    9940 Duplicate atom serial number found: 2734 
    9941 Duplicate atom serial number found: 2735 
    9942 Duplicate atom serial number found: 2736 
    9943 2038 messages similar to the above omitted 
    9944 Ignored bad PDB record found on line 28781 
    9945  
    9946  
    9947 Duplicate atom serial number found: 4775 
    9948 Duplicate atom serial number found: 4776 
    9949 Duplicate atom serial number found: 4777 
    9950 Duplicate atom serial number found: 4778 
    9951 Duplicate atom serial number found: 4779 
    9952 451 messages similar to the above omitted 
    9953 Ignored bad PDB record found on line 29239 
    9954  
    9955  
    9956 Duplicate atom serial number found: 5231 
    9957 Duplicate atom serial number found: 5232 
    9958 Duplicate atom serial number found: 5233 
    9959 Duplicate atom serial number found: 5234 
    9960 Duplicate atom serial number found: 5235 
    9961 384 messages similar to the above omitted 
    9962 Ignored bad PDB record found on line 29630 
    9963  
    9964  
    9965 Duplicate atom serial number found: 5620 
    9966 Duplicate atom serial number found: 5621 
    9967 Duplicate atom serial number found: 5622 
    9968 Duplicate atom serial number found: 5623 
    9969 Duplicate atom serial number found: 5624 
    9970 364 messages similar to the above omitted 
    9971 Ignored bad PDB record found on line 30001 
    9972  
    9973  
    9974 Duplicate atom serial number found: 1 
    9975 Duplicate atom serial number found: 2 
    9976 Duplicate atom serial number found: 3 
    9977 Duplicate atom serial number found: 4 
    9978 Duplicate atom serial number found: 5 
    9979 229 messages similar to the above omitted 
    9980 Ignored bad PDB record found on line 30237 
    9981  
    9982  
    9983 Duplicate atom serial number found: 235 
    9984 Duplicate atom serial number found: 236 
    9985 Duplicate atom serial number found: 237 
    9986 Duplicate atom serial number found: 238 
    9987 Duplicate atom serial number found: 239 
    9988 2492 messages similar to the above omitted 
    9989 Ignored bad PDB record found on line 32736 
    9990  
    9991  
    9992 Duplicate atom serial number found: 2732 
    9993 Duplicate atom serial number found: 2733 
    9994 Duplicate atom serial number found: 2734 
    9995 Duplicate atom serial number found: 2735 
    9996 Duplicate atom serial number found: 2736 
    9997 2038 messages similar to the above omitted 
    9998 Ignored bad PDB record found on line 34781 
    9999  
    10000  
    10001 Duplicate atom serial number found: 4775 
    10002 Duplicate atom serial number found: 4776 
    10003 Duplicate atom serial number found: 4777 
    10004 Duplicate atom serial number found: 4778 
    10005 Duplicate atom serial number found: 4779 
    10006 451 messages similar to the above omitted 
    10007 Ignored bad PDB record found on line 35239 
    10008  
    10009  
    10010 Duplicate atom serial number found: 5231 
    10011 Duplicate atom serial number found: 5232 
    10012 Duplicate atom serial number found: 5233 
    10013 Duplicate atom serial number found: 5234 
    10014 Duplicate atom serial number found: 5235 
    10015 384 messages similar to the above omitted 
    10016 Ignored bad PDB record found on line 35630 
    10017  
    10018  
    10019 Duplicate atom serial number found: 5620 
    10020 Duplicate atom serial number found: 5621 
    10021 Duplicate atom serial number found: 5622 
    10022 Duplicate atom serial number found: 5623 
    10023 Duplicate atom serial number found: 5624 
    10024 364 messages similar to the above omitted 
    10025 Ignored bad PDB record found on line 36001 
    10026  
    10027  
    10028 Duplicate atom serial number found: 1 
    10029 Duplicate atom serial number found: 2 
    10030 Duplicate atom serial number found: 3 
    10031 Duplicate atom serial number found: 4 
    10032 Duplicate atom serial number found: 5 
    10033 229 messages similar to the above omitted 
    10034 Ignored bad PDB record found on line 36237 
    10035  
    10036  
    10037 Duplicate atom serial number found: 235 
    10038 Duplicate atom serial number found: 236 
    10039 Duplicate atom serial number found: 237 
    10040 Duplicate atom serial number found: 238 
    10041 Duplicate atom serial number found: 239 
    10042 2492 messages similar to the above omitted 
    10043 Ignored bad PDB record found on line 38736 
    10044  
    10045  
    10046 Duplicate atom serial number found: 2732 
    10047 Duplicate atom serial number found: 2733 
    10048 Duplicate atom serial number found: 2734 
    10049 Duplicate atom serial number found: 2735 
    10050 Duplicate atom serial number found: 2736 
    10051 2038 messages similar to the above omitted 
    10052 Ignored bad PDB record found on line 40781 
    10053  
    10054  
    10055 Duplicate atom serial number found: 4775 
    10056 Duplicate atom serial number found: 4776 
    10057 Duplicate atom serial number found: 4777 
    10058 Duplicate atom serial number found: 4778 
    10059 Duplicate atom serial number found: 4779 
    10060 451 messages similar to the above omitted 
    10061 Ignored bad PDB record found on line 41239 
    10062  
    10063  
    10064 Duplicate atom serial number found: 5231 
    10065 Duplicate atom serial number found: 5232 
    10066 Duplicate atom serial number found: 5233 
    10067 Duplicate atom serial number found: 5234 
    10068 Duplicate atom serial number found: 5235 
    10069 384 messages similar to the above omitted 
    10070 Ignored bad PDB record found on line 41630 
    10071  
    10072  
    10073 Duplicate atom serial number found: 5620 
    10074 Duplicate atom serial number found: 5621 
    10075 Duplicate atom serial number found: 5622 
    10076 Duplicate atom serial number found: 5623 
    10077 Duplicate atom serial number found: 5624 
    10078 364 messages similar to the above omitted 
    10079 Ignored bad PDB record found on line 42001 
    10080  
    10081  
    10082 Duplicate atom serial number found: 1 
    10083 Duplicate atom serial number found: 2 
    10084 Duplicate atom serial number found: 3 
    10085 Duplicate atom serial number found: 4 
    10086 Duplicate atom serial number found: 5 
    10087 229 messages similar to the above omitted 
    10088 Ignored bad PDB record found on line 42237 
    10089  
    10090  
    10091 Duplicate atom serial number found: 235 
    10092 Duplicate atom serial number found: 236 
    10093 Duplicate atom serial number found: 237 
    10094 Duplicate atom serial number found: 238 
    10095 Duplicate atom serial number found: 239 
    10096 2492 messages similar to the above omitted 
    10097 Ignored bad PDB record found on line 44736 
    10098  
    10099  
    10100 Duplicate atom serial number found: 2732 
    10101 Duplicate atom serial number found: 2733 
    10102 Duplicate atom serial number found: 2734 
    10103 Duplicate atom serial number found: 2735 
    10104 Duplicate atom serial number found: 2736 
    10105 2038 messages similar to the above omitted 
    10106 Ignored bad PDB record found on line 46781 
    10107  
    10108  
    10109 Duplicate atom serial number found: 4775 
    10110 Duplicate atom serial number found: 4776 
    10111 Duplicate atom serial number found: 4777 
    10112 Duplicate atom serial number found: 4778 
    10113 Duplicate atom serial number found: 4779 
    10114 451 messages similar to the above omitted 
    10115 Ignored bad PDB record found on line 47239 
    10116  
    10117  
    10118 Duplicate atom serial number found: 5231 
    10119 Duplicate atom serial number found: 5232 
    10120 Duplicate atom serial number found: 5233 
    10121 Duplicate atom serial number found: 5234 
    10122 Duplicate atom serial number found: 5235 
    10123 384 messages similar to the above omitted 
    10124 Ignored bad PDB record found on line 47630 
    10125  
    10126  
    10127 Duplicate atom serial number found: 5620 
    10128 Duplicate atom serial number found: 5621 
    10129 Duplicate atom serial number found: 5622 
    10130 Duplicate atom serial number found: 5623 
    10131 Duplicate atom serial number found: 5624 
    10132 364 messages similar to the above omitted 
    10133 Ignored bad PDB record found on line 48001 
    10134  
    10135  
    10136 Duplicate atom serial number found: 1 
    10137 Duplicate atom serial number found: 2 
    10138 Duplicate atom serial number found: 3 
    10139 Duplicate atom serial number found: 4 
    10140 Duplicate atom serial number found: 5 
    10141 229 messages similar to the above omitted 
    10142 Ignored bad PDB record found on line 48237 
    10143  
    10144  
    10145 Duplicate atom serial number found: 235 
    10146 Duplicate atom serial number found: 236 
    10147 Duplicate atom serial number found: 237 
    10148 Duplicate atom serial number found: 238 
    10149 Duplicate atom serial number found: 239 
    10150 2492 messages similar to the above omitted 
    10151 Ignored bad PDB record found on line 50736 
    10152  
    10153  
    10154 Duplicate atom serial number found: 2732 
    10155 Duplicate atom serial number found: 2733 
    10156 Duplicate atom serial number found: 2734 
    10157 Duplicate atom serial number found: 2735 
    10158 Duplicate atom serial number found: 2736 
    10159 2038 messages similar to the above omitted 
    10160 Ignored bad PDB record found on line 52781 
    10161  
    10162  
    10163 Duplicate atom serial number found: 4775 
    10164 Duplicate atom serial number found: 4776 
    10165 Duplicate atom serial number found: 4777 
    10166 Duplicate atom serial number found: 4778 
    10167 Duplicate atom serial number found: 4779 
    10168 451 messages similar to the above omitted 
    10169 Ignored bad PDB record found on line 53239 
    10170  
    10171  
    10172 Duplicate atom serial number found: 5231 
    10173 Duplicate atom serial number found: 5232 
    10174 Duplicate atom serial number found: 5233 
    10175 Duplicate atom serial number found: 5234 
    10176 Duplicate atom serial number found: 5235 
    10177 384 messages similar to the above omitted 
    10178 Ignored bad PDB record found on line 53630 
    10179  
    10180  
    10181 Duplicate atom serial number found: 5620 
    10182 Duplicate atom serial number found: 5621 
    10183 Duplicate atom serial number found: 5622 
    10184 Duplicate atom serial number found: 5623 
    10185 Duplicate atom serial number found: 5624 
    10186 364 messages similar to the above omitted 
    10187 Ignored bad PDB record found on line 54001 
    10188  
    10189  
    10190 Duplicate atom serial number found: 1 
    10191 Duplicate atom serial number found: 2 
    10192 Duplicate atom serial number found: 3 
    10193 Duplicate atom serial number found: 4 
    10194 Duplicate atom serial number found: 5 
    10195 229 messages similar to the above omitted 
    10196 Ignored bad PDB record found on line 54237 
    10197  
    10198  
    10199 Duplicate atom serial number found: 235 
    10200 Duplicate atom serial number found: 236 
    10201 Duplicate atom serial number found: 237 
    10202 Duplicate atom serial number found: 238 
    10203 Duplicate atom serial number found: 239 
    10204 2492 messages similar to the above omitted 
    10205 Ignored bad PDB record found on line 56736 
    10206  
    10207  
    10208 Duplicate atom serial number found: 2732 
    10209 Duplicate atom serial number found: 2733 
    10210 Duplicate atom serial number found: 2734 
    10211 Duplicate atom serial number found: 2735 
    10212 Duplicate atom serial number found: 2736 
    10213 2038 messages similar to the above omitted 
    10214 Ignored bad PDB record found on line 58781 
    10215  
    10216  
    10217 Duplicate atom serial number found: 4775 
    10218 Duplicate atom serial number found: 4776 
    10219 Duplicate atom serial number found: 4777 
    10220 Duplicate atom serial number found: 4778 
    10221 Duplicate atom serial number found: 4779 
    10222 451 messages similar to the above omitted 
    10223 Ignored bad PDB record found on line 59239 
    10224  
    10225  
    10226 Duplicate atom serial number found: 5231 
    10227 Duplicate atom serial number found: 5232 
    10228 Duplicate atom serial number found: 5233 
    10229 Duplicate atom serial number found: 5234 
    10230 Duplicate atom serial number found: 5235 
    10231 384 messages similar to the above omitted 
    10232 Ignored bad PDB record found on line 59630 
    10233  
    10234  
    10235 Duplicate atom serial number found: 5620 
    10236 Duplicate atom serial number found: 5621 
    10237 Duplicate atom serial number found: 5622 
    10238 Duplicate atom serial number found: 5623 
    10239 Duplicate atom serial number found: 5624 
    10240 364 messages similar to the above omitted 
    10241 Ignored bad PDB record found on line 60001 
    10242  
    10243  
    10244 Duplicate atom serial number found: 1 
    10245 Duplicate atom serial number found: 2 
    10246 Duplicate atom serial number found: 3 
    10247 Duplicate atom serial number found: 4 
    10248 Duplicate atom serial number found: 5 
    10249 229 messages similar to the above omitted 
    10250 Ignored bad PDB record found on line 60237 
    10251  
    10252  
    10253 Duplicate atom serial number found: 235 
    10254 Duplicate atom serial number found: 236 
    10255 Duplicate atom serial number found: 237 
    10256 Duplicate atom serial number found: 238 
    10257 Duplicate atom serial number found: 239 
    10258 2492 messages similar to the above omitted 
    10259 Ignored bad PDB record found on line 62736 
    10260  
    10261  
    10262 Duplicate atom serial number found: 2732 
    10263 Duplicate atom serial number found: 2733 
    10264 Duplicate atom serial number found: 2734 
    10265 Duplicate atom serial number found: 2735 
    10266 Duplicate atom serial number found: 2736 
    10267 2038 messages similar to the above omitted 
    10268 Ignored bad PDB record found on line 64781 
    10269  
    10270  
    10271 Duplicate atom serial number found: 4775 
    10272 Duplicate atom serial number found: 4776 
    10273 Duplicate atom serial number found: 4777 
    10274 Duplicate atom serial number found: 4778 
    10275 Duplicate atom serial number found: 4779 
    10276 451 messages similar to the above omitted 
    10277 Ignored bad PDB record found on line 65239 
    10278  
    10279  
    10280 Duplicate atom serial number found: 5231 
    10281 Duplicate atom serial number found: 5232 
    10282 Duplicate atom serial number found: 5233 
    10283 Duplicate atom serial number found: 5234 
    10284 Duplicate atom serial number found: 5235 
    10285 384 messages similar to the above omitted 
    10286 Ignored bad PDB record found on line 65630 
    10287  
    10288  
    10289 Duplicate atom serial number found: 5620 
    10290 Duplicate atom serial number found: 5621 
    10291 Duplicate atom serial number found: 5622 
    10292 Duplicate atom serial number found: 5623 
    10293 Duplicate atom serial number found: 5624 
    10294 364 messages similar to the above omitted 
    10295 Ignored bad PDB record found on line 66001 
    10296  
    10297  
    10298 Duplicate atom serial number found: 1 
    10299 Duplicate atom serial number found: 2 
    10300 Duplicate atom serial number found: 3 
    10301 Duplicate atom serial number found: 4 
    10302 Duplicate atom serial number found: 5 
    10303 229 messages similar to the above omitted 
    10304 Ignored bad PDB record found on line 66237 
    10305  
    10306  
    10307 Duplicate atom serial number found: 235 
    10308 Duplicate atom serial number found: 236 
    10309 Duplicate atom serial number found: 237 
    10310 Duplicate atom serial number found: 238 
    10311 Duplicate atom serial number found: 239 
    10312 2492 messages similar to the above omitted 
    10313 Ignored bad PDB record found on line 68736 
    10314  
    10315  
    10316 Duplicate atom serial number found: 2732 
    10317 Duplicate atom serial number found: 2733 
    10318 Duplicate atom serial number found: 2734 
    10319 Duplicate atom serial number found: 2735 
    10320 Duplicate atom serial number found: 2736 
    10321 2038 messages similar to the above omitted 
    10322 Ignored bad PDB record found on line 70781 
    10323  
    10324  
    10325 Duplicate atom serial number found: 4775 
    10326 Duplicate atom serial number found: 4776 
    10327 Duplicate atom serial number found: 4777 
    10328 Duplicate atom serial number found: 4778 
    10329 Duplicate atom serial number found: 4779 
    10330 451 messages similar to the above omitted 
    10331 Ignored bad PDB record found on line 71239 
    10332  
    10333  
    10334 Duplicate atom serial number found: 5231 
    10335 Duplicate atom serial number found: 5232 
    10336 Duplicate atom serial number found: 5233 
    10337 Duplicate atom serial number found: 5234 
    10338 Duplicate atom serial number found: 5235 
    10339 384 messages similar to the above omitted 
    10340 Ignored bad PDB record found on line 71630 
    10341  
    10342  
    10343 Duplicate atom serial number found: 5620 
    10344 Duplicate atom serial number found: 5621 
    10345 Duplicate atom serial number found: 5622 
    10346 Duplicate atom serial number found: 5623 
    10347 Duplicate atom serial number found: 5624 
    10348 364 messages similar to the above omitted 
    10349 Ignored bad PDB record found on line 72001 
    10350  
    10351  
    10352 Duplicate atom serial number found: 1 
    10353 Duplicate atom serial number found: 2 
    10354 Duplicate atom serial number found: 3 
    10355 Duplicate atom serial number found: 4 
    10356 Duplicate atom serial number found: 5 
    10357 229 messages similar to the above omitted 
    10358 Ignored bad PDB record found on line 72237 
    10359  
    10360  
    10361 Duplicate atom serial number found: 235 
    10362 Duplicate atom serial number found: 236 
    10363 Duplicate atom serial number found: 237 
    10364 Duplicate atom serial number found: 238 
    10365 Duplicate atom serial number found: 239 
    10366 2492 messages similar to the above omitted 
    10367 Ignored bad PDB record found on line 74736 
    10368  
    10369  
    10370 Duplicate atom serial number found: 2732 
    10371 Duplicate atom serial number found: 2733 
    10372 Duplicate atom serial number found: 2734 
    10373 Duplicate atom serial number found: 2735 
    10374 Duplicate atom serial number found: 2736 
    10375 2038 messages similar to the above omitted 
    10376 Ignored bad PDB record found on line 76781 
    10377  
    10378  
    10379 Duplicate atom serial number found: 4775 
    10380 Duplicate atom serial number found: 4776 
    10381 Duplicate atom serial number found: 4777 
    10382 Duplicate atom serial number found: 4778 
    10383 Duplicate atom serial number found: 4779 
    10384 451 messages similar to the above omitted 
    10385 Ignored bad PDB record found on line 77239 
    10386  
    10387  
    10388 Duplicate atom serial number found: 5231 
    10389 Duplicate atom serial number found: 5232 
    10390 Duplicate atom serial number found: 5233 
    10391 Duplicate atom serial number found: 5234 
    10392 Duplicate atom serial number found: 5235 
    10393 384 messages similar to the above omitted 
    10394 Ignored bad PDB record found on line 77630 
    10395  
    10396  
    10397 Duplicate atom serial number found: 5620 
    10398 Duplicate atom serial number found: 5621 
    10399 Duplicate atom serial number found: 5622 
    10400 Duplicate atom serial number found: 5623 
    10401 Duplicate atom serial number found: 5624 
    10402 364 messages similar to the above omitted 
    10403 Ignored bad PDB record found on line 78001 
    10404  
    10405  
    10406 Duplicate atom serial number found: 1 
    10407 Duplicate atom serial number found: 2 
    10408 Duplicate atom serial number found: 3 
    10409 Duplicate atom serial number found: 4 
    10410 Duplicate atom serial number found: 5 
    10411 229 messages similar to the above omitted 
    10412 Ignored bad PDB record found on line 78237 
    10413  
    10414  
    10415 Duplicate atom serial number found: 235 
    10416 Duplicate atom serial number found: 236 
    10417 Duplicate atom serial number found: 237 
    10418 Duplicate atom serial number found: 238 
    10419 Duplicate atom serial number found: 239 
    10420 2492 messages similar to the above omitted 
    10421 Ignored bad PDB record found on line 80736 
    10422  
     3795[deleted to fit within ticket limits] 
    104233796 
    104243797Duplicate atom serial number found: 2732