2531 | | Traceback (most recent call last): |
2532 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2533 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2534 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2536 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2537 | | mouse_pause_tracking |
2538 | | self._mouse_pause() |
2539 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2540 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2541 | | m.pause(self._mouse_pause_position) |
2542 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2543 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2544 | | p = self.view.picked_object(x, y) |
2545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2546 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2547 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2548 | | beyond, |
2549 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2550 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2551 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2552 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2553 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2554 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2556 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2557 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2558 | | exclude=exclude) |
2559 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2560 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2561 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2562 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2563 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2564 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2566 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2567 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2568 | | exclude=exclude) |
2569 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2570 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2571 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2572 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2573 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2574 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2575 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2576 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2577 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2579 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2580 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2582 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2583 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2584 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2585 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2586 | | cget(self._c_pointers, n, pointer(values)) |
2587 | | OSError: exception: access violation reading 0x0000000000041468 |
2588 | | |
2589 | | OSError: exception: access violation reading 0x0000000000041468 |
2590 | | |
2591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2592 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2593 | | cget(self._c_pointers, n, pointer(values)) |
2594 | | |
2595 | | See log for complete Python traceback. |
2596 | | |
2597 | | Traceback (most recent call last): |
2598 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2599 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2600 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2602 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2603 | | mouse_pause_tracking |
2604 | | self._mouse_pause() |
2605 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2606 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2607 | | m.pause(self._mouse_pause_position) |
2608 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2609 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2610 | | p = self.view.picked_object(x, y) |
2611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2612 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2613 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2614 | | beyond, |
2615 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2616 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2617 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2618 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2619 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2620 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2622 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2623 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2624 | | exclude=exclude) |
2625 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2626 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2627 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2628 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2629 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2630 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2632 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2633 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2634 | | exclude=exclude) |
2635 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2636 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2637 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2638 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2639 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2640 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2641 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2642 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2643 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2645 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2646 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2648 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2649 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2650 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2651 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2652 | | cget(self._c_pointers, n, pointer(values)) |
2653 | | OSError: exception: access violation reading 0x0000000000041468 |
2654 | | |
2655 | | OSError: exception: access violation reading 0x0000000000041468 |
2656 | | |
2657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2658 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2659 | | cget(self._c_pointers, n, pointer(values)) |
2660 | | |
2661 | | See log for complete Python traceback. |
2662 | | |
2663 | | Traceback (most recent call last): |
2664 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2665 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2666 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2668 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2669 | | mouse_pause_tracking |
2670 | | self._mouse_pause() |
2671 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2672 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2673 | | m.pause(self._mouse_pause_position) |
2674 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2675 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2676 | | p = self.view.picked_object(x, y) |
2677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2678 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2679 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2680 | | beyond, |
2681 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2682 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2683 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2684 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2685 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2686 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2688 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2689 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2690 | | exclude=exclude) |
2691 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2692 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2693 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2694 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2695 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2696 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2698 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2699 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2700 | | exclude=exclude) |
2701 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2702 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2703 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2704 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2705 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2706 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2707 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2708 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2709 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2711 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2712 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2714 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2715 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2716 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2717 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2718 | | cget(self._c_pointers, n, pointer(values)) |
2719 | | OSError: exception: access violation reading 0x0000000000041468 |
2720 | | |
2721 | | OSError: exception: access violation reading 0x0000000000041468 |
2722 | | |
2723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2724 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2725 | | cget(self._c_pointers, n, pointer(values)) |
2726 | | |
2727 | | See log for complete Python traceback. |
2728 | | |
2729 | | Traceback (most recent call last): |
2730 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2731 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2732 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2734 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2735 | | mouse_pause_tracking |
2736 | | self._mouse_pause() |
2737 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2738 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2739 | | m.pause(self._mouse_pause_position) |
2740 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2741 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2742 | | p = self.view.picked_object(x, y) |
2743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2744 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2745 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2746 | | beyond, |
2747 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2748 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2749 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2750 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2751 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2752 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2754 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2755 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2756 | | exclude=exclude) |
2757 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2758 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2759 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2760 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2761 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2762 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2764 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2765 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2766 | | exclude=exclude) |
2767 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2768 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2769 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2770 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2771 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2772 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2773 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2774 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2775 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2777 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2778 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2780 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2781 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2782 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2783 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2784 | | cget(self._c_pointers, n, pointer(values)) |
2785 | | OSError: exception: access violation reading 0x0000000000041468 |
2786 | | |
2787 | | OSError: exception: access violation reading 0x0000000000041468 |
2788 | | |
2789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2790 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2791 | | cget(self._c_pointers, n, pointer(values)) |
2792 | | |
2793 | | See log for complete Python traceback. |
2794 | | |
2795 | | Traceback (most recent call last): |
2796 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2797 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2798 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2800 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2801 | | mouse_pause_tracking |
2802 | | self._mouse_pause() |
2803 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2804 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2805 | | m.pause(self._mouse_pause_position) |
2806 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2807 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2808 | | p = self.view.picked_object(x, y) |
2809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2810 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2811 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2812 | | beyond, |
2813 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2814 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2815 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2816 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2817 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2818 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2820 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2821 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2822 | | exclude=exclude) |
2823 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2824 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2825 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2826 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2827 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2828 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2830 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2831 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2832 | | exclude=exclude) |
2833 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2834 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2835 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2836 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2837 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2838 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2839 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2840 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2841 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2843 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2844 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2846 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2847 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2848 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2849 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2850 | | cget(self._c_pointers, n, pointer(values)) |
2851 | | OSError: exception: access violation reading 0x0000000000041468 |
2852 | | |
2853 | | OSError: exception: access violation reading 0x0000000000041468 |
2854 | | |
2855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2856 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2857 | | cget(self._c_pointers, n, pointer(values)) |
2858 | | |
2859 | | See log for complete Python traceback. |
2860 | | |
2861 | | Traceback (most recent call last): |
2862 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2863 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2864 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2866 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2867 | | mouse_pause_tracking |
2868 | | self._mouse_pause() |
2869 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2870 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2871 | | m.pause(self._mouse_pause_position) |
2872 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2873 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2874 | | p = self.view.picked_object(x, y) |
2875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2876 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2877 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2878 | | beyond, |
2879 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2880 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2881 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2882 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2883 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2884 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2886 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2887 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2888 | | exclude=exclude) |
2889 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2890 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2891 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2892 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2893 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2894 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2896 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2897 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2898 | | exclude=exclude) |
2899 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2900 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2901 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2902 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2903 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2904 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2905 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2906 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2907 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2909 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2910 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2912 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2913 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2914 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2915 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2916 | | cget(self._c_pointers, n, pointer(values)) |
2917 | | OSError: exception: access violation reading 0x0000000000041468 |
2918 | | |
2919 | | OSError: exception: access violation reading 0x0000000000041468 |
2920 | | |
2921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2922 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2923 | | cget(self._c_pointers, n, pointer(values)) |
2924 | | |
2925 | | See log for complete Python traceback. |
2926 | | |
2927 | | Traceback (most recent call last): |
2928 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2929 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2930 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2932 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2933 | | mouse_pause_tracking |
2934 | | self._mouse_pause() |
2935 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2936 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
2937 | | m.pause(self._mouse_pause_position) |
2938 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2939 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
2940 | | p = self.view.picked_object(x, y) |
2941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2942 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
2943 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
2944 | | beyond, |
2945 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2946 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
2947 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
2948 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2949 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2950 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2952 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2953 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2954 | | exclude=exclude) |
2955 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2956 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2957 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2958 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2959 | | packages\chimerax\core\models.py", line 126, in first_intercept |
2960 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
2961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2962 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
2963 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
2964 | | exclude=exclude) |
2965 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2966 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
2967 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
2968 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2969 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
2970 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
2971 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2972 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
2973 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
2974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2975 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
2976 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
2977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2978 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
2979 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
2980 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2981 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2982 | | cget(self._c_pointers, n, pointer(values)) |
2983 | | OSError: exception: access violation reading 0x0000000000041468 |
2984 | | |
2985 | | OSError: exception: access violation reading 0x0000000000041468 |
2986 | | |
2987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2988 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
2989 | | cget(self._c_pointers, n, pointer(values)) |
2990 | | |
2991 | | See log for complete Python traceback. |
2992 | | |
2993 | | Traceback (most recent call last): |
2994 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2995 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
2996 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
2997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
2998 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
2999 | | mouse_pause_tracking |
3000 | | self._mouse_pause() |
3001 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3002 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3003 | | m.pause(self._mouse_pause_position) |
3004 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3005 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3006 | | p = self.view.picked_object(x, y) |
3007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3008 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3009 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3010 | | beyond, |
3011 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3012 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3013 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3014 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3015 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3016 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3018 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3019 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3020 | | exclude=exclude) |
3021 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3022 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3023 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3024 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3025 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3026 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3028 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3029 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3030 | | exclude=exclude) |
3031 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3032 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3033 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3034 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3035 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3036 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3037 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3038 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3039 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3041 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3042 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3044 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3045 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3046 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3047 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3048 | | cget(self._c_pointers, n, pointer(values)) |
3049 | | OSError: exception: access violation reading 0x0000000000041468 |
3050 | | |
3051 | | OSError: exception: access violation reading 0x0000000000041468 |
3052 | | |
3053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3054 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3055 | | cget(self._c_pointers, n, pointer(values)) |
3056 | | |
3057 | | See log for complete Python traceback. |
3058 | | |
3059 | | Traceback (most recent call last): |
3060 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3061 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3062 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3064 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3065 | | mouse_pause_tracking |
3066 | | self._mouse_pause() |
3067 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3068 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3069 | | m.pause(self._mouse_pause_position) |
3070 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3071 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3072 | | p = self.view.picked_object(x, y) |
3073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3074 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3075 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3076 | | beyond, |
3077 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3078 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3079 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3080 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3081 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3082 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3084 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3085 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3086 | | exclude=exclude) |
3087 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3088 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3089 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3090 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3091 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3092 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3094 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3095 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3096 | | exclude=exclude) |
3097 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3098 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3099 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3100 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3101 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3102 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3103 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3104 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3105 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3107 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3108 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3110 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3111 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3112 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3113 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3114 | | cget(self._c_pointers, n, pointer(values)) |
3115 | | OSError: exception: access violation reading 0x0000000000041468 |
3116 | | |
3117 | | OSError: exception: access violation reading 0x0000000000041468 |
3118 | | |
3119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3120 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3121 | | cget(self._c_pointers, n, pointer(values)) |
3122 | | |
3123 | | See log for complete Python traceback. |
3124 | | |
3125 | | Traceback (most recent call last): |
3126 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3127 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3128 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3130 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3131 | | mouse_pause_tracking |
3132 | | self._mouse_pause() |
3133 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3134 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3135 | | m.pause(self._mouse_pause_position) |
3136 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3137 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3138 | | p = self.view.picked_object(x, y) |
3139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3140 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3141 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3142 | | beyond, |
3143 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3144 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3145 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3146 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3147 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3148 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3150 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3151 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3152 | | exclude=exclude) |
3153 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3154 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3155 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3156 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3157 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3158 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3160 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3161 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3162 | | exclude=exclude) |
3163 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3164 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3165 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3166 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3167 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3168 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3169 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3170 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3171 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3173 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3174 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3176 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3177 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3178 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3179 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3180 | | cget(self._c_pointers, n, pointer(values)) |
3181 | | OSError: exception: access violation reading 0x0000000000041468 |
3182 | | |
3183 | | OSError: exception: access violation reading 0x0000000000041468 |
3184 | | |
3185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3186 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3187 | | cget(self._c_pointers, n, pointer(values)) |
3188 | | |
3189 | | See log for complete Python traceback. |
3190 | | |
3191 | | Traceback (most recent call last): |
3192 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3193 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3194 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3196 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3197 | | mouse_pause_tracking |
3198 | | self._mouse_pause() |
3199 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3200 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3201 | | m.pause(self._mouse_pause_position) |
3202 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3203 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3204 | | p = self.view.picked_object(x, y) |
3205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3206 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3207 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3208 | | beyond, |
3209 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3210 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3211 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3212 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3213 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3214 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3216 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3217 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3218 | | exclude=exclude) |
3219 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3220 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3221 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3222 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3223 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3224 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3226 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3227 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3228 | | exclude=exclude) |
3229 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3230 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3231 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3232 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3233 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3234 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3235 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3236 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3237 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3239 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3240 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3242 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3243 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3244 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3245 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3246 | | cget(self._c_pointers, n, pointer(values)) |
3247 | | OSError: exception: access violation reading 0x0000000000041468 |
3248 | | |
3249 | | OSError: exception: access violation reading 0x0000000000041468 |
3250 | | |
3251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3252 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3253 | | cget(self._c_pointers, n, pointer(values)) |
3254 | | |
3255 | | See log for complete Python traceback. |
3256 | | |
3257 | | Traceback (most recent call last): |
3258 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3259 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3260 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3262 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3263 | | mouse_pause_tracking |
3264 | | self._mouse_pause() |
3265 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3266 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3267 | | m.pause(self._mouse_pause_position) |
3268 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3269 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3270 | | p = self.view.picked_object(x, y) |
3271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3272 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3273 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3274 | | beyond, |
3275 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3276 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3277 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3278 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3279 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3280 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3282 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3283 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3284 | | exclude=exclude) |
3285 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3286 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3287 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3288 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3289 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3290 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3292 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3293 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3294 | | exclude=exclude) |
3295 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3296 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3297 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3298 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3299 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3300 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3301 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3302 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3303 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3305 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3306 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3308 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3309 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3310 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3311 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3312 | | cget(self._c_pointers, n, pointer(values)) |
3313 | | OSError: exception: access violation reading 0x0000000000041468 |
3314 | | |
3315 | | OSError: exception: access violation reading 0x0000000000041468 |
3316 | | |
3317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3318 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3319 | | cget(self._c_pointers, n, pointer(values)) |
3320 | | |
3321 | | See log for complete Python traceback. |
3322 | | |
3323 | | Traceback (most recent call last): |
3324 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3325 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3326 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3328 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3329 | | mouse_pause_tracking |
3330 | | self._mouse_pause() |
3331 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3332 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3333 | | m.pause(self._mouse_pause_position) |
3334 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3335 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3336 | | p = self.view.picked_object(x, y) |
3337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3338 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3339 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3340 | | beyond, |
3341 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3342 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3343 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3344 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3345 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3346 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3348 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3349 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3350 | | exclude=exclude) |
3351 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3352 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3353 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3354 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3355 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3356 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3358 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3359 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3360 | | exclude=exclude) |
3361 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3362 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3363 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3364 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3365 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3366 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3367 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3368 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3369 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3371 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3372 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3374 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3375 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3376 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3377 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3378 | | cget(self._c_pointers, n, pointer(values)) |
3379 | | OSError: exception: access violation reading 0x0000000000041468 |
3380 | | |
3381 | | OSError: exception: access violation reading 0x0000000000041468 |
3382 | | |
3383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3384 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3385 | | cget(self._c_pointers, n, pointer(values)) |
3386 | | |
3387 | | See log for complete Python traceback. |
3388 | | |
3389 | | Traceback (most recent call last): |
3390 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3391 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3392 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3394 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3395 | | mouse_pause_tracking |
3396 | | self._mouse_pause() |
3397 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3398 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3399 | | m.pause(self._mouse_pause_position) |
3400 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3401 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3402 | | p = self.view.picked_object(x, y) |
3403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3404 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3405 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3406 | | beyond, |
3407 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3408 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3409 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3410 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3411 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3412 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3414 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3415 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3416 | | exclude=exclude) |
3417 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3418 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3419 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3420 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3421 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3422 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3424 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3425 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3426 | | exclude=exclude) |
3427 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3428 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3429 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3430 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3431 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3432 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3433 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3434 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3435 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3437 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3438 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3440 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3441 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3442 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3443 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3444 | | cget(self._c_pointers, n, pointer(values)) |
3445 | | OSError: exception: access violation reading 0x0000000000041468 |
3446 | | |
3447 | | OSError: exception: access violation reading 0x0000000000041468 |
3448 | | |
3449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3450 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3451 | | cget(self._c_pointers, n, pointer(values)) |
3452 | | |
3453 | | See log for complete Python traceback. |
3454 | | |
3455 | | Traceback (most recent call last): |
3456 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3457 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3458 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3460 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3461 | | mouse_pause_tracking |
3462 | | self._mouse_pause() |
3463 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3464 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3465 | | m.pause(self._mouse_pause_position) |
3466 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3467 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3468 | | p = self.view.picked_object(x, y) |
3469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3470 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3471 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3472 | | beyond, |
3473 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3474 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3475 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3476 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3477 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3478 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3480 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3481 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3482 | | exclude=exclude) |
3483 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3484 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3485 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3486 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3487 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3488 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3490 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3491 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3492 | | exclude=exclude) |
3493 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3494 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3495 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3496 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3497 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3498 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3499 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3500 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3501 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3503 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3504 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3506 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3507 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3508 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3509 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3510 | | cget(self._c_pointers, n, pointer(values)) |
3511 | | OSError: exception: access violation reading 0x0000000000041468 |
3512 | | |
3513 | | OSError: exception: access violation reading 0x0000000000041468 |
3514 | | |
3515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3516 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3517 | | cget(self._c_pointers, n, pointer(values)) |
3518 | | |
3519 | | See log for complete Python traceback. |
3520 | | |
3521 | | Traceback (most recent call last): |
3522 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3523 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3524 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3526 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3527 | | mouse_pause_tracking |
3528 | | self._mouse_pause() |
3529 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3530 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3531 | | m.pause(self._mouse_pause_position) |
3532 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3533 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3534 | | p = self.view.picked_object(x, y) |
3535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3536 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3537 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3538 | | beyond, |
3539 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3540 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3541 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3542 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3543 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3544 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3546 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3547 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3548 | | exclude=exclude) |
3549 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3550 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3551 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3552 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3553 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3554 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3556 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3557 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3558 | | exclude=exclude) |
3559 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3560 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3561 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3562 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3563 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3564 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3566 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3567 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3569 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3570 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3572 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3573 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3574 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3575 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3576 | | cget(self._c_pointers, n, pointer(values)) |
3577 | | OSError: exception: access violation reading 0x0000000000041468 |
3578 | | |
3579 | | OSError: exception: access violation reading 0x0000000000041468 |
3580 | | |
3581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3582 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3583 | | cget(self._c_pointers, n, pointer(values)) |
3584 | | |
3585 | | See log for complete Python traceback. |
3586 | | |
3587 | | Traceback (most recent call last): |
3588 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3589 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3590 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3592 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3593 | | mouse_pause_tracking |
3594 | | self._mouse_pause() |
3595 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3596 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3597 | | m.pause(self._mouse_pause_position) |
3598 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3599 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3600 | | p = self.view.picked_object(x, y) |
3601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3602 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3603 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3604 | | beyond, |
3605 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3606 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3607 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3608 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3609 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3610 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3612 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3613 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3614 | | exclude=exclude) |
3615 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3616 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3617 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3618 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3619 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3620 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3622 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3623 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3624 | | exclude=exclude) |
3625 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3626 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3627 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3628 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3629 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3630 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3632 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3633 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3635 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3636 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3638 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3639 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3640 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3641 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3642 | | cget(self._c_pointers, n, pointer(values)) |
3643 | | OSError: exception: access violation reading 0x0000000000041468 |
3644 | | |
3645 | | OSError: exception: access violation reading 0x0000000000041468 |
3646 | | |
3647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3648 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3649 | | cget(self._c_pointers, n, pointer(values)) |
3650 | | |
3651 | | See log for complete Python traceback. |
3652 | | |
3653 | | Traceback (most recent call last): |
3654 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3655 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3656 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3658 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3659 | | mouse_pause_tracking |
3660 | | self._mouse_pause() |
3661 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3662 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3663 | | m.pause(self._mouse_pause_position) |
3664 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3665 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3666 | | p = self.view.picked_object(x, y) |
3667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3668 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3669 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3670 | | beyond, |
3671 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3672 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3673 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3674 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3675 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3676 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3678 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3679 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3680 | | exclude=exclude) |
3681 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3682 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3683 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3684 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3685 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3686 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3688 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3689 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3690 | | exclude=exclude) |
3691 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3692 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3693 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3694 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3695 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3696 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3698 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3699 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3701 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3702 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3704 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3705 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3706 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3707 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3708 | | cget(self._c_pointers, n, pointer(values)) |
3709 | | OSError: exception: access violation reading 0x0000000000041468 |
3710 | | |
3711 | | OSError: exception: access violation reading 0x0000000000041468 |
3712 | | |
3713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3714 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3715 | | cget(self._c_pointers, n, pointer(values)) |
3716 | | |
3717 | | See log for complete Python traceback. |
3718 | | |
3719 | | Traceback (most recent call last): |
3720 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3721 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3722 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3724 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3725 | | mouse_pause_tracking |
3726 | | self._mouse_pause() |
3727 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3728 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3729 | | m.pause(self._mouse_pause_position) |
3730 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3731 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3732 | | p = self.view.picked_object(x, y) |
3733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3734 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3735 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3736 | | beyond, |
3737 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3738 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3739 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3740 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3741 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3742 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3744 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3745 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3746 | | exclude=exclude) |
3747 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3748 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3749 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3750 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3751 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3752 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3754 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3755 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3756 | | exclude=exclude) |
3757 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3758 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3759 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3760 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3761 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3762 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3764 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3765 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3767 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3768 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3770 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3771 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3772 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3773 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3774 | | cget(self._c_pointers, n, pointer(values)) |
3775 | | OSError: exception: access violation reading 0x0000000000041468 |
3776 | | |
3777 | | OSError: exception: access violation reading 0x0000000000041468 |
3778 | | |
3779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3780 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3781 | | cget(self._c_pointers, n, pointer(values)) |
3782 | | |
3783 | | See log for complete Python traceback. |
3784 | | |
3785 | | Traceback (most recent call last): |
3786 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3787 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3788 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3790 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3791 | | mouse_pause_tracking |
3792 | | self._mouse_pause() |
3793 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3794 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3795 | | m.pause(self._mouse_pause_position) |
3796 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3797 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3798 | | p = self.view.picked_object(x, y) |
3799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3800 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3801 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3802 | | beyond, |
3803 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3804 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3805 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3806 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3807 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3808 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3810 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3811 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3812 | | exclude=exclude) |
3813 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3814 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3815 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3816 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3817 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3818 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3820 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3821 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3822 | | exclude=exclude) |
3823 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3824 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3825 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3826 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3827 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3828 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3830 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3831 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3833 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3834 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3836 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3837 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3838 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3839 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3840 | | cget(self._c_pointers, n, pointer(values)) |
3841 | | OSError: exception: access violation reading 0x0000000000041468 |
3842 | | |
3843 | | OSError: exception: access violation reading 0x0000000000041468 |
3844 | | |
3845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3846 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3847 | | cget(self._c_pointers, n, pointer(values)) |
3848 | | |
3849 | | See log for complete Python traceback. |
3850 | | |
3851 | | Traceback (most recent call last): |
3852 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3853 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3854 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3856 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3857 | | mouse_pause_tracking |
3858 | | self._mouse_pause() |
3859 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3860 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3861 | | m.pause(self._mouse_pause_position) |
3862 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3863 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3864 | | p = self.view.picked_object(x, y) |
3865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3866 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3867 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3868 | | beyond, |
3869 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3870 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3871 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3872 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3873 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3874 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3876 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3877 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3878 | | exclude=exclude) |
3879 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3880 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3881 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3882 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3883 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3884 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3886 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3887 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3888 | | exclude=exclude) |
3889 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3890 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3891 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3892 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3893 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3894 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3896 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3897 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3899 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3900 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3902 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3903 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3904 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3905 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3906 | | cget(self._c_pointers, n, pointer(values)) |
3907 | | OSError: exception: access violation reading 0x0000000000041468 |
3908 | | |
3909 | | OSError: exception: access violation reading 0x0000000000041468 |
3910 | | |
3911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3912 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3913 | | cget(self._c_pointers, n, pointer(values)) |
3914 | | |
3915 | | See log for complete Python traceback. |
3916 | | |
3917 | | Traceback (most recent call last): |
3918 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3919 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3920 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3922 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3923 | | mouse_pause_tracking |
3924 | | self._mouse_pause() |
3925 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3926 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3927 | | m.pause(self._mouse_pause_position) |
3928 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3929 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3930 | | p = self.view.picked_object(x, y) |
3931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3932 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3933 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
3934 | | beyond, |
3935 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3936 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
3937 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
3938 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3939 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3940 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3942 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3943 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3944 | | exclude=exclude) |
3945 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3946 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3947 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3948 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3949 | | packages\chimerax\core\models.py", line 126, in first_intercept |
3950 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
3951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3952 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
3953 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
3954 | | exclude=exclude) |
3955 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3956 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
3957 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
3958 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3959 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
3960 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
3961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3962 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
3963 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
3964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3965 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
3966 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
3967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3968 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
3969 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
3970 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3971 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3972 | | cget(self._c_pointers, n, pointer(values)) |
3973 | | OSError: exception: access violation reading 0x0000000000041468 |
3974 | | |
3975 | | OSError: exception: access violation reading 0x0000000000041468 |
3976 | | |
3977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3978 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
3979 | | cget(self._c_pointers, n, pointer(values)) |
3980 | | |
3981 | | See log for complete Python traceback. |
3982 | | |
3983 | | Traceback (most recent call last): |
3984 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3985 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
3986 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
3987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3988 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
3989 | | mouse_pause_tracking |
3990 | | self._mouse_pause() |
3991 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3992 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
3993 | | m.pause(self._mouse_pause_position) |
3994 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3995 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
3996 | | p = self.view.picked_object(x, y) |
3997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
3998 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
3999 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4000 | | beyond, |
4001 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4002 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4003 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4004 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4005 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4006 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4008 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4009 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4010 | | exclude=exclude) |
4011 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4012 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4013 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4014 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4015 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4016 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4018 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4019 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4020 | | exclude=exclude) |
4021 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4022 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4023 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4024 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4025 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4026 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4028 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4029 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4031 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4032 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4034 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4035 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4036 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4037 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4038 | | cget(self._c_pointers, n, pointer(values)) |
4039 | | OSError: exception: access violation reading 0x0000000000041468 |
4040 | | |
4041 | | OSError: exception: access violation reading 0x0000000000041468 |
4042 | | |
4043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4044 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4045 | | cget(self._c_pointers, n, pointer(values)) |
4046 | | |
4047 | | See log for complete Python traceback. |
4048 | | |
4049 | | Traceback (most recent call last): |
4050 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4051 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4052 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4054 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4055 | | mouse_pause_tracking |
4056 | | self._mouse_pause() |
4057 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4058 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4059 | | m.pause(self._mouse_pause_position) |
4060 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4061 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4062 | | p = self.view.picked_object(x, y) |
4063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4064 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4065 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4066 | | beyond, |
4067 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4068 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4069 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4070 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4071 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4072 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4074 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4075 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4076 | | exclude=exclude) |
4077 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4078 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4079 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4080 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4081 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4082 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4084 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4085 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4086 | | exclude=exclude) |
4087 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4088 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4089 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4090 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4091 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4092 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4094 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4095 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4097 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4098 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4100 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4101 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4102 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4103 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4104 | | cget(self._c_pointers, n, pointer(values)) |
4105 | | OSError: exception: access violation reading 0x0000000000041468 |
4106 | | |
4107 | | OSError: exception: access violation reading 0x0000000000041468 |
4108 | | |
4109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4110 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4111 | | cget(self._c_pointers, n, pointer(values)) |
4112 | | |
4113 | | See log for complete Python traceback. |
4114 | | |
4115 | | Traceback (most recent call last): |
4116 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4117 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4118 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4120 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4121 | | mouse_pause_tracking |
4122 | | self._mouse_pause() |
4123 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4124 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4125 | | m.pause(self._mouse_pause_position) |
4126 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4127 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4128 | | p = self.view.picked_object(x, y) |
4129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4130 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4131 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4132 | | beyond, |
4133 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4134 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4135 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4136 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4137 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4138 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4140 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4141 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4142 | | exclude=exclude) |
4143 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4144 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4145 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4146 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4147 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4148 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4150 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4151 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4152 | | exclude=exclude) |
4153 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4154 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4155 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4156 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4157 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4158 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4160 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4161 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4163 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4164 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4166 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4167 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4168 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4169 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4170 | | cget(self._c_pointers, n, pointer(values)) |
4171 | | OSError: exception: access violation reading 0x0000000000041468 |
4172 | | |
4173 | | OSError: exception: access violation reading 0x0000000000041468 |
4174 | | |
4175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4176 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4177 | | cget(self._c_pointers, n, pointer(values)) |
4178 | | |
4179 | | See log for complete Python traceback. |
4180 | | |
4181 | | Traceback (most recent call last): |
4182 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4183 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4184 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4186 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4187 | | mouse_pause_tracking |
4188 | | self._mouse_pause() |
4189 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4190 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4191 | | m.pause(self._mouse_pause_position) |
4192 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4193 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4194 | | p = self.view.picked_object(x, y) |
4195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4196 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4197 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4198 | | beyond, |
4199 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4200 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4201 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4202 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4203 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4204 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4206 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4207 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4208 | | exclude=exclude) |
4209 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4210 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4211 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4212 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4213 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4214 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4216 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4217 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4218 | | exclude=exclude) |
4219 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4220 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4221 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4222 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4223 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4224 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4226 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4227 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4229 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4230 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4232 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4233 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4234 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4235 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4236 | | cget(self._c_pointers, n, pointer(values)) |
4237 | | OSError: exception: access violation reading 0x0000000000041468 |
4238 | | |
4239 | | OSError: exception: access violation reading 0x0000000000041468 |
4240 | | |
4241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4242 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4243 | | cget(self._c_pointers, n, pointer(values)) |
4244 | | |
4245 | | See log for complete Python traceback. |
4246 | | |
4247 | | Traceback (most recent call last): |
4248 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4249 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4250 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4252 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4253 | | mouse_pause_tracking |
4254 | | self._mouse_pause() |
4255 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4256 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4257 | | m.pause(self._mouse_pause_position) |
4258 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4259 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4260 | | p = self.view.picked_object(x, y) |
4261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4262 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4263 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4264 | | beyond, |
4265 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4266 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4267 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4268 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4269 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4270 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4272 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4273 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4274 | | exclude=exclude) |
4275 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4276 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4277 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4278 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4279 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4280 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4282 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4283 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4284 | | exclude=exclude) |
4285 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4286 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4287 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4288 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4289 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4290 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4292 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4293 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4295 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4296 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4298 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4299 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4300 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4301 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4302 | | cget(self._c_pointers, n, pointer(values)) |
4303 | | OSError: exception: access violation reading 0x0000000000041468 |
4304 | | |
4305 | | OSError: exception: access violation reading 0x0000000000041468 |
4306 | | |
4307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4308 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4309 | | cget(self._c_pointers, n, pointer(values)) |
4310 | | |
4311 | | See log for complete Python traceback. |
4312 | | |
4313 | | Traceback (most recent call last): |
4314 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4315 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4316 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4318 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4319 | | mouse_pause_tracking |
4320 | | self._mouse_pause() |
4321 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4322 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4323 | | m.pause(self._mouse_pause_position) |
4324 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4325 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4326 | | p = self.view.picked_object(x, y) |
4327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4328 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4329 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4330 | | beyond, |
4331 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4332 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4333 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4334 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4335 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4336 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4338 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4339 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4340 | | exclude=exclude) |
4341 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4342 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4343 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4344 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4345 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4346 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4348 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4349 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4350 | | exclude=exclude) |
4351 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4352 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4353 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4354 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4355 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4356 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4358 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4359 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4361 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4362 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4364 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4365 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4366 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4367 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4368 | | cget(self._c_pointers, n, pointer(values)) |
4369 | | OSError: exception: access violation reading 0x0000000000041468 |
4370 | | |
4371 | | OSError: exception: access violation reading 0x0000000000041468 |
4372 | | |
4373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4374 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4375 | | cget(self._c_pointers, n, pointer(values)) |
4376 | | |
4377 | | See log for complete Python traceback. |
4378 | | |
4379 | | Traceback (most recent call last): |
4380 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4381 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4382 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4384 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4385 | | mouse_pause_tracking |
4386 | | self._mouse_pause() |
4387 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4388 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4389 | | m.pause(self._mouse_pause_position) |
4390 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4391 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4392 | | p = self.view.picked_object(x, y) |
4393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4394 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4395 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4396 | | beyond, |
4397 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4398 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4399 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4400 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4401 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4402 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4404 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4405 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4406 | | exclude=exclude) |
4407 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4408 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4409 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4410 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4411 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4412 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4414 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4415 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4416 | | exclude=exclude) |
4417 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4418 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4419 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4420 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4421 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4422 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4424 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4425 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4427 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4428 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4430 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4431 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4432 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4433 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4434 | | cget(self._c_pointers, n, pointer(values)) |
4435 | | OSError: exception: access violation reading 0x0000000000041468 |
4436 | | |
4437 | | OSError: exception: access violation reading 0x0000000000041468 |
4438 | | |
4439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4440 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4441 | | cget(self._c_pointers, n, pointer(values)) |
4442 | | |
4443 | | See log for complete Python traceback. |
4444 | | |
4445 | | Traceback (most recent call last): |
4446 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4447 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4448 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4450 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4451 | | mouse_pause_tracking |
4452 | | self._mouse_pause() |
4453 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4454 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4455 | | m.pause(self._mouse_pause_position) |
4456 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4457 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4458 | | p = self.view.picked_object(x, y) |
4459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4460 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4461 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4462 | | beyond, |
4463 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4464 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4465 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4466 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4467 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4468 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4470 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4471 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4472 | | exclude=exclude) |
4473 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4474 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4475 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4476 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4477 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4478 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4480 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4481 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4482 | | exclude=exclude) |
4483 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4484 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4485 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4486 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4487 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4488 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4490 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4491 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4493 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4494 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4496 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4497 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4498 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4499 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4500 | | cget(self._c_pointers, n, pointer(values)) |
4501 | | OSError: exception: access violation reading 0x0000000000041468 |
4502 | | |
4503 | | OSError: exception: access violation reading 0x0000000000041468 |
4504 | | |
4505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4506 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4507 | | cget(self._c_pointers, n, pointer(values)) |
4508 | | |
4509 | | See log for complete Python traceback. |
4510 | | |
4511 | | Traceback (most recent call last): |
4512 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4513 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4514 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4516 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4517 | | mouse_pause_tracking |
4518 | | self._mouse_pause() |
4519 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4520 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4521 | | m.pause(self._mouse_pause_position) |
4522 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4523 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4524 | | p = self.view.picked_object(x, y) |
4525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4526 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4527 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4528 | | beyond, |
4529 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4530 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4531 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4532 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4533 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4534 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4536 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4537 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4538 | | exclude=exclude) |
4539 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4540 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4541 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4542 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4543 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4544 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4546 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4547 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4548 | | exclude=exclude) |
4549 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4550 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4551 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4552 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4553 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4554 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4556 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4557 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4559 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4560 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4562 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4563 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4564 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4565 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4566 | | cget(self._c_pointers, n, pointer(values)) |
4567 | | OSError: exception: access violation reading 0x0000000000041468 |
4568 | | |
4569 | | OSError: exception: access violation reading 0x0000000000041468 |
4570 | | |
4571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4572 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4573 | | cget(self._c_pointers, n, pointer(values)) |
4574 | | |
4575 | | See log for complete Python traceback. |
4576 | | |
4577 | | Traceback (most recent call last): |
4578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4579 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4580 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4582 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4583 | | mouse_pause_tracking |
4584 | | self._mouse_pause() |
4585 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4586 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4587 | | m.pause(self._mouse_pause_position) |
4588 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4589 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4590 | | p = self.view.picked_object(x, y) |
4591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4592 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4593 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4594 | | beyond, |
4595 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4596 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4597 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4598 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4599 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4600 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4602 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4603 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4604 | | exclude=exclude) |
4605 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4606 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4607 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4608 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4609 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4610 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4612 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4613 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4614 | | exclude=exclude) |
4615 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4616 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4617 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4618 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4619 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4620 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4622 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4623 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4625 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4626 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4628 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4629 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4630 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4631 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4632 | | cget(self._c_pointers, n, pointer(values)) |
4633 | | OSError: exception: access violation reading 0x0000000000041468 |
4634 | | |
4635 | | OSError: exception: access violation reading 0x0000000000041468 |
4636 | | |
4637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4638 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4639 | | cget(self._c_pointers, n, pointer(values)) |
4640 | | |
4641 | | See log for complete Python traceback. |
4642 | | |
4643 | | Traceback (most recent call last): |
4644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4645 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4646 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4648 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4649 | | mouse_pause_tracking |
4650 | | self._mouse_pause() |
4651 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4652 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4653 | | m.pause(self._mouse_pause_position) |
4654 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4655 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4656 | | p = self.view.picked_object(x, y) |
4657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4658 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4659 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4660 | | beyond, |
4661 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4662 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4663 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4664 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4665 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4666 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4668 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4669 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4670 | | exclude=exclude) |
4671 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4672 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4673 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4674 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4675 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4676 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4678 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4679 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4680 | | exclude=exclude) |
4681 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4682 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4683 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4684 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4685 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4686 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4688 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4689 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4691 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4692 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4694 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4695 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4696 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4697 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4698 | | cget(self._c_pointers, n, pointer(values)) |
4699 | | OSError: exception: access violation reading 0x0000000000041468 |
4700 | | |
4701 | | OSError: exception: access violation reading 0x0000000000041468 |
4702 | | |
4703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4704 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4705 | | cget(self._c_pointers, n, pointer(values)) |
4706 | | |
4707 | | See log for complete Python traceback. |
4708 | | |
4709 | | Traceback (most recent call last): |
4710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4711 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4712 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4714 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4715 | | mouse_pause_tracking |
4716 | | self._mouse_pause() |
4717 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4718 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4719 | | m.pause(self._mouse_pause_position) |
4720 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4721 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4722 | | p = self.view.picked_object(x, y) |
4723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4724 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4725 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4726 | | beyond, |
4727 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4728 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4729 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4730 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4731 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4732 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4734 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4735 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4736 | | exclude=exclude) |
4737 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4738 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4739 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4740 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4741 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4742 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4744 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4745 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4746 | | exclude=exclude) |
4747 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4748 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4749 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4750 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4751 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4752 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4754 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4755 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4757 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4758 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4760 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4761 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4762 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4763 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4764 | | cget(self._c_pointers, n, pointer(values)) |
4765 | | OSError: exception: access violation reading 0x0000000000041468 |
4766 | | |
4767 | | OSError: exception: access violation reading 0x0000000000041468 |
4768 | | |
4769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4770 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4771 | | cget(self._c_pointers, n, pointer(values)) |
4772 | | |
4773 | | See log for complete Python traceback. |
4774 | | |
4775 | | Traceback (most recent call last): |
4776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4777 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4778 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4780 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4781 | | mouse_pause_tracking |
4782 | | self._mouse_pause() |
4783 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4784 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4785 | | m.pause(self._mouse_pause_position) |
4786 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4787 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4788 | | p = self.view.picked_object(x, y) |
4789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4790 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4791 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4792 | | beyond, |
4793 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4794 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4795 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4796 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4797 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4798 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4800 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4801 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4802 | | exclude=exclude) |
4803 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4804 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4805 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4806 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4807 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4808 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4810 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4811 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4812 | | exclude=exclude) |
4813 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4814 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4815 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4816 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4817 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4818 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4820 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4821 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4823 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4824 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4826 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4827 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4828 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4829 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4830 | | cget(self._c_pointers, n, pointer(values)) |
4831 | | OSError: exception: access violation reading 0x0000000000041468 |
4832 | | |
4833 | | OSError: exception: access violation reading 0x0000000000041468 |
4834 | | |
4835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4836 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4837 | | cget(self._c_pointers, n, pointer(values)) |
4838 | | |
4839 | | See log for complete Python traceback. |
4840 | | |
4841 | | Traceback (most recent call last): |
4842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4843 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4844 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4846 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4847 | | mouse_pause_tracking |
4848 | | self._mouse_pause() |
4849 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4850 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4851 | | m.pause(self._mouse_pause_position) |
4852 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4853 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4854 | | p = self.view.picked_object(x, y) |
4855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4856 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4857 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4858 | | beyond, |
4859 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4860 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4861 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4862 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4863 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4864 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4866 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4867 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4868 | | exclude=exclude) |
4869 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4870 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4871 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4872 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4873 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4874 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4876 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4877 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4878 | | exclude=exclude) |
4879 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4880 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4881 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4882 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4883 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4884 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4886 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4887 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4889 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4890 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4892 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4893 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4894 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4895 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4896 | | cget(self._c_pointers, n, pointer(values)) |
4897 | | OSError: exception: access violation reading 0x0000000000041468 |
4898 | | |
4899 | | OSError: exception: access violation reading 0x0000000000041468 |
4900 | | |
4901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4902 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4903 | | cget(self._c_pointers, n, pointer(values)) |
4904 | | |
4905 | | See log for complete Python traceback. |
4906 | | |
4907 | | Traceback (most recent call last): |
4908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4909 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4910 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4912 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4913 | | mouse_pause_tracking |
4914 | | self._mouse_pause() |
4915 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4916 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4917 | | m.pause(self._mouse_pause_position) |
4918 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4919 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4920 | | p = self.view.picked_object(x, y) |
4921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4922 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4923 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4924 | | beyond, |
4925 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4926 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4927 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4928 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4929 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4930 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4932 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4933 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4934 | | exclude=exclude) |
4935 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4936 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4937 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4938 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4939 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4940 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4942 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4943 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
4944 | | exclude=exclude) |
4945 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4946 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
4947 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
4948 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4949 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
4950 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
4951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4952 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
4953 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
4954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4955 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
4956 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
4957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4958 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
4959 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
4960 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4961 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4962 | | cget(self._c_pointers, n, pointer(values)) |
4963 | | OSError: exception: access violation reading 0x0000000000041468 |
4964 | | |
4965 | | OSError: exception: access violation reading 0x0000000000041468 |
4966 | | |
4967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4968 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
4969 | | cget(self._c_pointers, n, pointer(values)) |
4970 | | |
4971 | | See log for complete Python traceback. |
4972 | | |
4973 | | Traceback (most recent call last): |
4974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4975 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
4976 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
4977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4978 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
4979 | | mouse_pause_tracking |
4980 | | self._mouse_pause() |
4981 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4982 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
4983 | | m.pause(self._mouse_pause_position) |
4984 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4985 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
4986 | | p = self.view.picked_object(x, y) |
4987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4988 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
4989 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
4990 | | beyond, |
4991 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4992 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
4993 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
4994 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4995 | | packages\chimerax\core\models.py", line 126, in first_intercept |
4996 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
4997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
4998 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
4999 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5000 | | exclude=exclude) |
5001 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5002 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5003 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5004 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5005 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5006 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5008 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5009 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5010 | | exclude=exclude) |
5011 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5012 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5013 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5014 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5015 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5016 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5018 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5019 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5021 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5022 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5024 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5025 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5026 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5027 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5028 | | cget(self._c_pointers, n, pointer(values)) |
5029 | | OSError: exception: access violation reading 0x0000000000041468 |
5030 | | |
5031 | | OSError: exception: access violation reading 0x0000000000041468 |
5032 | | |
5033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5034 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5035 | | cget(self._c_pointers, n, pointer(values)) |
5036 | | |
5037 | | See log for complete Python traceback. |
5038 | | |
5039 | | Traceback (most recent call last): |
5040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5041 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5042 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5044 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5045 | | mouse_pause_tracking |
5046 | | self._mouse_pause() |
5047 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5048 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5049 | | m.pause(self._mouse_pause_position) |
5050 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5051 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5052 | | p = self.view.picked_object(x, y) |
5053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5054 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5055 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5056 | | beyond, |
5057 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5058 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5059 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5060 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5061 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5062 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5064 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5065 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5066 | | exclude=exclude) |
5067 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5068 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5069 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5070 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5071 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5072 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5074 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5075 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5076 | | exclude=exclude) |
5077 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5078 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5079 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5080 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5081 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5082 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5084 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5085 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5087 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5088 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5090 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5091 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5092 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5093 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5094 | | cget(self._c_pointers, n, pointer(values)) |
5095 | | OSError: exception: access violation reading 0x0000000000041468 |
5096 | | |
5097 | | OSError: exception: access violation reading 0x0000000000041468 |
5098 | | |
5099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5100 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5101 | | cget(self._c_pointers, n, pointer(values)) |
5102 | | |
5103 | | See log for complete Python traceback. |
5104 | | |
5105 | | Traceback (most recent call last): |
5106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5107 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5108 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5110 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5111 | | mouse_pause_tracking |
5112 | | self._mouse_pause() |
5113 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5114 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5115 | | m.pause(self._mouse_pause_position) |
5116 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5117 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5118 | | p = self.view.picked_object(x, y) |
5119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5120 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5121 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5122 | | beyond, |
5123 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5124 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5125 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5126 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5127 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5128 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5130 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5131 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5132 | | exclude=exclude) |
5133 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5134 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5135 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5136 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5137 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5138 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5140 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5141 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5142 | | exclude=exclude) |
5143 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5144 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5145 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5146 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5147 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5148 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5150 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5151 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5153 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5154 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5156 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5157 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5158 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5159 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5160 | | cget(self._c_pointers, n, pointer(values)) |
5161 | | OSError: exception: access violation reading 0x0000000000041468 |
5162 | | |
5163 | | OSError: exception: access violation reading 0x0000000000041468 |
5164 | | |
5165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5166 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5167 | | cget(self._c_pointers, n, pointer(values)) |
5168 | | |
5169 | | See log for complete Python traceback. |
5170 | | |
5171 | | Traceback (most recent call last): |
5172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5173 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5174 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5176 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5177 | | mouse_pause_tracking |
5178 | | self._mouse_pause() |
5179 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5180 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5181 | | m.pause(self._mouse_pause_position) |
5182 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5183 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5184 | | p = self.view.picked_object(x, y) |
5185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5186 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5187 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5188 | | beyond, |
5189 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5190 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5191 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5192 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5193 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5194 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5196 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5197 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5198 | | exclude=exclude) |
5199 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5200 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5201 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5202 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5203 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5204 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5206 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5207 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5208 | | exclude=exclude) |
5209 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5210 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5211 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5212 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5213 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5214 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5216 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5217 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5219 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5220 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5222 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5223 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5224 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5225 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5226 | | cget(self._c_pointers, n, pointer(values)) |
5227 | | OSError: exception: access violation reading 0x0000000000041468 |
5228 | | |
5229 | | OSError: exception: access violation reading 0x0000000000041468 |
5230 | | |
5231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5232 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5233 | | cget(self._c_pointers, n, pointer(values)) |
5234 | | |
5235 | | See log for complete Python traceback. |
5236 | | |
5237 | | Traceback (most recent call last): |
5238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5239 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5240 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5242 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5243 | | mouse_pause_tracking |
5244 | | self._mouse_pause() |
5245 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5246 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5247 | | m.pause(self._mouse_pause_position) |
5248 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5249 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5250 | | p = self.view.picked_object(x, y) |
5251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5252 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5253 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5254 | | beyond, |
5255 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5256 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5257 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5258 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5259 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5260 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5262 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5263 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5264 | | exclude=exclude) |
5265 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5266 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5267 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5268 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5269 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5270 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5272 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5273 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5274 | | exclude=exclude) |
5275 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5276 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5277 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5278 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5279 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5280 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5282 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5283 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5285 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5286 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5288 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5289 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5290 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5291 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5292 | | cget(self._c_pointers, n, pointer(values)) |
5293 | | OSError: exception: access violation reading 0x0000000000041468 |
5294 | | |
5295 | | OSError: exception: access violation reading 0x0000000000041468 |
5296 | | |
5297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5298 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5299 | | cget(self._c_pointers, n, pointer(values)) |
5300 | | |
5301 | | See log for complete Python traceback. |
5302 | | |
5303 | | Traceback (most recent call last): |
5304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5305 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5306 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5308 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5309 | | mouse_pause_tracking |
5310 | | self._mouse_pause() |
5311 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5312 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5313 | | m.pause(self._mouse_pause_position) |
5314 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5315 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5316 | | p = self.view.picked_object(x, y) |
5317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5318 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5319 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5320 | | beyond, |
5321 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5322 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5323 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5324 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5325 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5326 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5328 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5329 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5330 | | exclude=exclude) |
5331 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5332 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5333 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5334 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5335 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5336 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5338 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5339 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5340 | | exclude=exclude) |
5341 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5342 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5343 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5344 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5345 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5346 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5348 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5349 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5351 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5352 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5354 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5355 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5356 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5357 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5358 | | cget(self._c_pointers, n, pointer(values)) |
5359 | | OSError: exception: access violation reading 0x0000000000041468 |
5360 | | |
5361 | | OSError: exception: access violation reading 0x0000000000041468 |
5362 | | |
5363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5364 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5365 | | cget(self._c_pointers, n, pointer(values)) |
5366 | | |
5367 | | See log for complete Python traceback. |
5368 | | |
5369 | | Traceback (most recent call last): |
5370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5371 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5372 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5374 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5375 | | mouse_pause_tracking |
5376 | | self._mouse_pause() |
5377 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5378 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5379 | | m.pause(self._mouse_pause_position) |
5380 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5381 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5382 | | p = self.view.picked_object(x, y) |
5383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5384 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5385 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5386 | | beyond, |
5387 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5388 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5389 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5390 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5391 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5392 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5394 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5395 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5396 | | exclude=exclude) |
5397 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5398 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5399 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5400 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5401 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5402 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5404 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5405 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5406 | | exclude=exclude) |
5407 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5408 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5409 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5410 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5411 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5412 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5414 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5415 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5417 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5418 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5420 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5421 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5422 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5423 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5424 | | cget(self._c_pointers, n, pointer(values)) |
5425 | | OSError: exception: access violation reading 0x0000000000041468 |
5426 | | |
5427 | | OSError: exception: access violation reading 0x0000000000041468 |
5428 | | |
5429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5430 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5431 | | cget(self._c_pointers, n, pointer(values)) |
5432 | | |
5433 | | See log for complete Python traceback. |
5434 | | |
5435 | | Traceback (most recent call last): |
5436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5437 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5438 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5440 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5441 | | mouse_pause_tracking |
5442 | | self._mouse_pause() |
5443 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5444 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5445 | | m.pause(self._mouse_pause_position) |
5446 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5447 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5448 | | p = self.view.picked_object(x, y) |
5449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5450 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5451 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5452 | | beyond, |
5453 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5454 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5455 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5456 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5457 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5458 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5460 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5461 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5462 | | exclude=exclude) |
5463 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5464 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5465 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5466 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5467 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5468 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5470 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5471 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5472 | | exclude=exclude) |
5473 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5474 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5475 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5476 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5477 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5478 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5480 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5481 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5483 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5484 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5486 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5487 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5488 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5489 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5490 | | cget(self._c_pointers, n, pointer(values)) |
5491 | | OSError: exception: access violation reading 0x0000000000041468 |
5492 | | |
5493 | | OSError: exception: access violation reading 0x0000000000041468 |
5494 | | |
5495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5496 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5497 | | cget(self._c_pointers, n, pointer(values)) |
5498 | | |
5499 | | See log for complete Python traceback. |
5500 | | |
5501 | | Traceback (most recent call last): |
5502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5503 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5504 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5506 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5507 | | mouse_pause_tracking |
5508 | | self._mouse_pause() |
5509 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5510 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5511 | | m.pause(self._mouse_pause_position) |
5512 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5513 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5514 | | p = self.view.picked_object(x, y) |
5515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5516 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5517 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5518 | | beyond, |
5519 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5520 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5521 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5522 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5523 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5524 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5526 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5527 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5528 | | exclude=exclude) |
5529 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5530 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5531 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5532 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5533 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5534 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5536 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5537 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5538 | | exclude=exclude) |
5539 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5540 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5541 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5542 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5543 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5544 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5546 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5547 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5549 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5550 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5552 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5553 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5554 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5555 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5556 | | cget(self._c_pointers, n, pointer(values)) |
5557 | | OSError: exception: access violation reading 0x0000000000041468 |
5558 | | |
5559 | | OSError: exception: access violation reading 0x0000000000041468 |
5560 | | |
5561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5562 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5563 | | cget(self._c_pointers, n, pointer(values)) |
5564 | | |
5565 | | See log for complete Python traceback. |
5566 | | |
5567 | | Traceback (most recent call last): |
5568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5569 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5570 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5572 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5573 | | mouse_pause_tracking |
5574 | | self._mouse_pause() |
5575 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5576 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5577 | | m.pause(self._mouse_pause_position) |
5578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5579 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5580 | | p = self.view.picked_object(x, y) |
5581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5582 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5583 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5584 | | beyond, |
5585 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5586 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5587 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5588 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5589 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5590 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5592 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5593 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5594 | | exclude=exclude) |
5595 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5596 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5597 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5598 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5599 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5600 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5602 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5603 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5604 | | exclude=exclude) |
5605 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5606 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5607 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5608 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5609 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5610 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5612 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5613 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5615 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5616 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5618 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5619 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5620 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5621 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5622 | | cget(self._c_pointers, n, pointer(values)) |
5623 | | OSError: exception: access violation reading 0x0000000000041468 |
5624 | | |
5625 | | OSError: exception: access violation reading 0x0000000000041468 |
5626 | | |
5627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5628 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5629 | | cget(self._c_pointers, n, pointer(values)) |
5630 | | |
5631 | | See log for complete Python traceback. |
5632 | | |
5633 | | Traceback (most recent call last): |
5634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5635 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5636 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5638 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5639 | | mouse_pause_tracking |
5640 | | self._mouse_pause() |
5641 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5642 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5643 | | m.pause(self._mouse_pause_position) |
5644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5645 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5646 | | p = self.view.picked_object(x, y) |
5647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5648 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5649 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5650 | | beyond, |
5651 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5652 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5653 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5654 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5655 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5656 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5658 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5659 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5660 | | exclude=exclude) |
5661 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5662 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5663 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5664 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5665 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5666 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5668 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5669 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5670 | | exclude=exclude) |
5671 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5672 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5673 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5674 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5675 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5676 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5678 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5679 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5681 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5682 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5684 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5685 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5686 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5687 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5688 | | cget(self._c_pointers, n, pointer(values)) |
5689 | | OSError: exception: access violation reading 0x0000000000041468 |
5690 | | |
5691 | | OSError: exception: access violation reading 0x0000000000041468 |
5692 | | |
5693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5694 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5695 | | cget(self._c_pointers, n, pointer(values)) |
5696 | | |
5697 | | See log for complete Python traceback. |
5698 | | |
5699 | | Traceback (most recent call last): |
5700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5701 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5702 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5704 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5705 | | mouse_pause_tracking |
5706 | | self._mouse_pause() |
5707 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5708 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5709 | | m.pause(self._mouse_pause_position) |
5710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5711 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5712 | | p = self.view.picked_object(x, y) |
5713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5714 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5715 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5716 | | beyond, |
5717 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5718 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5719 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5720 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5721 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5722 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5724 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5725 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5726 | | exclude=exclude) |
5727 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5728 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5729 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5730 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5731 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5732 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5734 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5735 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5736 | | exclude=exclude) |
5737 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5738 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5739 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5740 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5741 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5742 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5744 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5745 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5747 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5748 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5750 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5751 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5752 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5753 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5754 | | cget(self._c_pointers, n, pointer(values)) |
5755 | | OSError: exception: access violation reading 0x0000000000041468 |
5756 | | |
5757 | | OSError: exception: access violation reading 0x0000000000041468 |
5758 | | |
5759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5760 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5761 | | cget(self._c_pointers, n, pointer(values)) |
5762 | | |
5763 | | See log for complete Python traceback. |
5764 | | |
5765 | | Traceback (most recent call last): |
5766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5767 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5768 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5770 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5771 | | mouse_pause_tracking |
5772 | | self._mouse_pause() |
5773 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5774 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5775 | | m.pause(self._mouse_pause_position) |
5776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5777 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5778 | | p = self.view.picked_object(x, y) |
5779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5780 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5781 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5782 | | beyond, |
5783 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5784 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5785 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5786 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5787 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5788 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5790 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5791 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5792 | | exclude=exclude) |
5793 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5794 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5795 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5796 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5797 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5798 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5800 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5801 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5802 | | exclude=exclude) |
5803 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5804 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5805 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5806 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5807 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5808 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5810 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5811 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5813 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5814 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5816 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5817 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5818 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5819 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5820 | | cget(self._c_pointers, n, pointer(values)) |
5821 | | OSError: exception: access violation reading 0x0000000000041468 |
5822 | | |
5823 | | OSError: exception: access violation reading 0x0000000000041468 |
5824 | | |
5825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5826 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5827 | | cget(self._c_pointers, n, pointer(values)) |
5828 | | |
5829 | | See log for complete Python traceback. |
5830 | | |
5831 | | Traceback (most recent call last): |
5832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5833 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5834 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5836 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5837 | | mouse_pause_tracking |
5838 | | self._mouse_pause() |
5839 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5840 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5841 | | m.pause(self._mouse_pause_position) |
5842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5843 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5844 | | p = self.view.picked_object(x, y) |
5845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5846 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5847 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5848 | | beyond, |
5849 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5850 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5851 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5852 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5853 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5854 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5856 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5857 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5858 | | exclude=exclude) |
5859 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5860 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5861 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5862 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5863 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5864 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5866 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5867 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5868 | | exclude=exclude) |
5869 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5870 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5871 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5872 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5873 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5874 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5876 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5877 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5879 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5880 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5882 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5883 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5884 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5885 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5886 | | cget(self._c_pointers, n, pointer(values)) |
5887 | | OSError: exception: access violation reading 0x0000000000041468 |
5888 | | |
5889 | | OSError: exception: access violation reading 0x0000000000041468 |
5890 | | |
5891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5892 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5893 | | cget(self._c_pointers, n, pointer(values)) |
5894 | | |
5895 | | See log for complete Python traceback. |
5896 | | |
5897 | | Traceback (most recent call last): |
5898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5899 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5900 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5902 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5903 | | mouse_pause_tracking |
5904 | | self._mouse_pause() |
5905 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5906 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5907 | | m.pause(self._mouse_pause_position) |
5908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5909 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5910 | | p = self.view.picked_object(x, y) |
5911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5912 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5913 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5914 | | beyond, |
5915 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5916 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5917 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5918 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5919 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5920 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5922 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5923 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5924 | | exclude=exclude) |
5925 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5926 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5927 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5928 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5929 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5930 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5932 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5933 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5934 | | exclude=exclude) |
5935 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5936 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5937 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5938 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5939 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
5940 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
5941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5942 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
5943 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
5944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5945 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
5946 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
5947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5948 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
5949 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
5950 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5951 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5952 | | cget(self._c_pointers, n, pointer(values)) |
5953 | | OSError: exception: access violation reading 0x0000000000041468 |
5954 | | |
5955 | | OSError: exception: access violation reading 0x0000000000041468 |
5956 | | |
5957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5958 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
5959 | | cget(self._c_pointers, n, pointer(values)) |
5960 | | |
5961 | | See log for complete Python traceback. |
5962 | | |
5963 | | Traceback (most recent call last): |
5964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5965 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
5966 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
5967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5968 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
5969 | | mouse_pause_tracking |
5970 | | self._mouse_pause() |
5971 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5972 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
5973 | | m.pause(self._mouse_pause_position) |
5974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5975 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
5976 | | p = self.view.picked_object(x, y) |
5977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5978 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
5979 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
5980 | | beyond, |
5981 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5982 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
5983 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
5984 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5985 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5986 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5988 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5989 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
5990 | | exclude=exclude) |
5991 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5992 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
5993 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
5994 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5995 | | packages\chimerax\core\models.py", line 126, in first_intercept |
5996 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
5997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
5998 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
5999 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6000 | | exclude=exclude) |
6001 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6002 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6003 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6004 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6005 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6006 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6008 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6009 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6011 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6012 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6014 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6015 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6016 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6017 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6018 | | cget(self._c_pointers, n, pointer(values)) |
6019 | | OSError: exception: access violation reading 0x0000000000041468 |
6020 | | |
6021 | | OSError: exception: access violation reading 0x0000000000041468 |
6022 | | |
6023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6024 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6025 | | cget(self._c_pointers, n, pointer(values)) |
6026 | | |
6027 | | See log for complete Python traceback. |
6028 | | |
6029 | | Traceback (most recent call last): |
6030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6031 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6032 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6034 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6035 | | mouse_pause_tracking |
6036 | | self._mouse_pause() |
6037 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6038 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6039 | | m.pause(self._mouse_pause_position) |
6040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6041 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6042 | | p = self.view.picked_object(x, y) |
6043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6044 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6045 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6046 | | beyond, |
6047 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6048 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6049 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6050 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6051 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6052 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6054 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6055 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6056 | | exclude=exclude) |
6057 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6058 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6059 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6060 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6061 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6062 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6064 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6065 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6066 | | exclude=exclude) |
6067 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6068 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6069 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6070 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6071 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6072 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6074 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6075 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6077 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6078 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6080 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6081 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6082 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6083 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6084 | | cget(self._c_pointers, n, pointer(values)) |
6085 | | OSError: exception: access violation reading 0x0000000000041468 |
6086 | | |
6087 | | OSError: exception: access violation reading 0x0000000000041468 |
6088 | | |
6089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6090 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6091 | | cget(self._c_pointers, n, pointer(values)) |
6092 | | |
6093 | | See log for complete Python traceback. |
6094 | | |
6095 | | Traceback (most recent call last): |
6096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6097 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6098 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6100 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6101 | | mouse_pause_tracking |
6102 | | self._mouse_pause() |
6103 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6104 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6105 | | m.pause(self._mouse_pause_position) |
6106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6107 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6108 | | p = self.view.picked_object(x, y) |
6109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6110 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6111 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6112 | | beyond, |
6113 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6114 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6115 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6116 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6117 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6118 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6120 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6121 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6122 | | exclude=exclude) |
6123 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6124 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6125 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6126 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6127 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6128 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6130 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6131 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6132 | | exclude=exclude) |
6133 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6134 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6135 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6136 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6137 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6138 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6140 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6141 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6143 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6144 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6146 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6147 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6148 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6149 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6150 | | cget(self._c_pointers, n, pointer(values)) |
6151 | | OSError: exception: access violation reading 0x0000000000041468 |
6152 | | |
6153 | | OSError: exception: access violation reading 0x0000000000041468 |
6154 | | |
6155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6156 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6157 | | cget(self._c_pointers, n, pointer(values)) |
6158 | | |
6159 | | See log for complete Python traceback. |
6160 | | |
6161 | | Traceback (most recent call last): |
6162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6163 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6164 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6166 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6167 | | mouse_pause_tracking |
6168 | | self._mouse_pause() |
6169 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6170 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6171 | | m.pause(self._mouse_pause_position) |
6172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6173 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6174 | | p = self.view.picked_object(x, y) |
6175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6176 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6177 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6178 | | beyond, |
6179 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6180 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6181 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6182 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6183 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6184 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6186 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6187 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6188 | | exclude=exclude) |
6189 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6190 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6191 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6192 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6193 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6194 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6196 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6197 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6198 | | exclude=exclude) |
6199 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6200 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6201 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6202 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6203 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6204 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6206 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6207 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6209 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6210 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6212 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6213 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6214 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6215 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6216 | | cget(self._c_pointers, n, pointer(values)) |
6217 | | OSError: exception: access violation reading 0x0000000000041468 |
6218 | | |
6219 | | OSError: exception: access violation reading 0x0000000000041468 |
6220 | | |
6221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6222 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6223 | | cget(self._c_pointers, n, pointer(values)) |
6224 | | |
6225 | | See log for complete Python traceback. |
6226 | | |
6227 | | Traceback (most recent call last): |
6228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6229 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6230 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6232 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6233 | | mouse_pause_tracking |
6234 | | self._mouse_pause() |
6235 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6236 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6237 | | m.pause(self._mouse_pause_position) |
6238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6239 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6240 | | p = self.view.picked_object(x, y) |
6241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6242 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6243 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6244 | | beyond, |
6245 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6246 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6247 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6248 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6249 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6250 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6252 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6253 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6254 | | exclude=exclude) |
6255 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6256 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6257 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6258 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6259 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6260 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6262 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6263 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6264 | | exclude=exclude) |
6265 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6266 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6267 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6268 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6269 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6270 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6272 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6273 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6275 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6276 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6278 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6279 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6280 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6281 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6282 | | cget(self._c_pointers, n, pointer(values)) |
6283 | | OSError: exception: access violation reading 0x0000000000041468 |
6284 | | |
6285 | | OSError: exception: access violation reading 0x0000000000041468 |
6286 | | |
6287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6288 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6289 | | cget(self._c_pointers, n, pointer(values)) |
6290 | | |
6291 | | See log for complete Python traceback. |
6292 | | |
6293 | | Traceback (most recent call last): |
6294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6295 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6296 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6298 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6299 | | mouse_pause_tracking |
6300 | | self._mouse_pause() |
6301 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6302 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6303 | | m.pause(self._mouse_pause_position) |
6304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6305 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6306 | | p = self.view.picked_object(x, y) |
6307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6308 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6309 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6310 | | beyond, |
6311 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6312 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6313 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6314 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6315 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6316 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6318 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6319 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6320 | | exclude=exclude) |
6321 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6322 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6323 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6324 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6325 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6326 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6328 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6329 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6330 | | exclude=exclude) |
6331 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6332 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6333 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6334 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6335 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6336 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6338 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6339 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6341 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6342 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6344 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6345 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6346 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6347 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6348 | | cget(self._c_pointers, n, pointer(values)) |
6349 | | OSError: exception: access violation reading 0x0000000000041468 |
6350 | | |
6351 | | OSError: exception: access violation reading 0x0000000000041468 |
6352 | | |
6353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6354 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6355 | | cget(self._c_pointers, n, pointer(values)) |
6356 | | |
6357 | | See log for complete Python traceback. |
6358 | | |
6359 | | Traceback (most recent call last): |
6360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6361 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6362 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6364 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6365 | | mouse_pause_tracking |
6366 | | self._mouse_pause() |
6367 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6368 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6369 | | m.pause(self._mouse_pause_position) |
6370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6371 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6372 | | p = self.view.picked_object(x, y) |
6373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6374 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6375 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6376 | | beyond, |
6377 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6378 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6379 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6380 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6381 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6382 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6384 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6385 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6386 | | exclude=exclude) |
6387 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6388 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6389 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6390 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6391 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6392 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6394 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6395 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6396 | | exclude=exclude) |
6397 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6398 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6399 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6400 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6401 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6402 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6404 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6405 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6407 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6408 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6410 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6411 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6412 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6413 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6414 | | cget(self._c_pointers, n, pointer(values)) |
6415 | | OSError: exception: access violation reading 0x0000000000041468 |
6416 | | |
6417 | | OSError: exception: access violation reading 0x0000000000041468 |
6418 | | |
6419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6420 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6421 | | cget(self._c_pointers, n, pointer(values)) |
6422 | | |
6423 | | See log for complete Python traceback. |
6424 | | |
6425 | | Traceback (most recent call last): |
6426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6427 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6428 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6430 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6431 | | mouse_pause_tracking |
6432 | | self._mouse_pause() |
6433 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6434 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6435 | | m.pause(self._mouse_pause_position) |
6436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6437 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6438 | | p = self.view.picked_object(x, y) |
6439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6440 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6441 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6442 | | beyond, |
6443 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6444 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6445 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6446 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6447 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6448 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6450 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6451 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6452 | | exclude=exclude) |
6453 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6454 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6455 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6456 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6457 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6458 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6460 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6461 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6462 | | exclude=exclude) |
6463 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6464 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6465 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6466 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6467 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6468 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6470 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6471 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6473 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6474 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6476 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6477 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6478 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6479 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6480 | | cget(self._c_pointers, n, pointer(values)) |
6481 | | OSError: exception: access violation reading 0x0000000000041468 |
6482 | | |
6483 | | OSError: exception: access violation reading 0x0000000000041468 |
6484 | | |
6485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6486 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6487 | | cget(self._c_pointers, n, pointer(values)) |
6488 | | |
6489 | | See log for complete Python traceback. |
6490 | | |
6491 | | Traceback (most recent call last): |
6492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6493 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6494 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6496 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6497 | | mouse_pause_tracking |
6498 | | self._mouse_pause() |
6499 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6500 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6501 | | m.pause(self._mouse_pause_position) |
6502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6503 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6504 | | p = self.view.picked_object(x, y) |
6505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6506 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6507 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6508 | | beyond, |
6509 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6510 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6511 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6512 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6513 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6514 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6516 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6517 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6518 | | exclude=exclude) |
6519 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6520 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6521 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6522 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6523 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6524 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6526 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6527 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6528 | | exclude=exclude) |
6529 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6530 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6531 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6532 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6533 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6534 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6536 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6537 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6539 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6540 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6542 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6543 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6544 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6545 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6546 | | cget(self._c_pointers, n, pointer(values)) |
6547 | | OSError: exception: access violation reading 0x0000000000041468 |
6548 | | |
6549 | | OSError: exception: access violation reading 0x0000000000041468 |
6550 | | |
6551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6552 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6553 | | cget(self._c_pointers, n, pointer(values)) |
6554 | | |
6555 | | See log for complete Python traceback. |
6556 | | |
6557 | | Traceback (most recent call last): |
6558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6559 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6560 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6562 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6563 | | mouse_pause_tracking |
6564 | | self._mouse_pause() |
6565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6566 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6567 | | m.pause(self._mouse_pause_position) |
6568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6569 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6570 | | p = self.view.picked_object(x, y) |
6571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6572 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6573 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6574 | | beyond, |
6575 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6576 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6577 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6579 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6580 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6582 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6583 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6584 | | exclude=exclude) |
6585 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6586 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6587 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6588 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6589 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6590 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6592 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6593 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6594 | | exclude=exclude) |
6595 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6596 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6597 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6598 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6599 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6600 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6602 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6603 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6605 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6606 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6608 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6609 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6610 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6611 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6612 | | cget(self._c_pointers, n, pointer(values)) |
6613 | | OSError: exception: access violation reading 0x0000000000041468 |
6614 | | |
6615 | | OSError: exception: access violation reading 0x0000000000041468 |
6616 | | |
6617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6618 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6619 | | cget(self._c_pointers, n, pointer(values)) |
6620 | | |
6621 | | See log for complete Python traceback. |
6622 | | |
6623 | | Traceback (most recent call last): |
6624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6625 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6626 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6628 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6629 | | mouse_pause_tracking |
6630 | | self._mouse_pause() |
6631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6632 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6633 | | m.pause(self._mouse_pause_position) |
6634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6635 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6636 | | p = self.view.picked_object(x, y) |
6637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6638 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6639 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6640 | | beyond, |
6641 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6642 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6643 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6645 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6646 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6648 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6649 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6650 | | exclude=exclude) |
6651 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6652 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6653 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6654 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6655 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6656 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6658 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6659 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6660 | | exclude=exclude) |
6661 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6662 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6663 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6664 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6665 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6666 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6668 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6669 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6671 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6672 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6674 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6675 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6676 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6677 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6678 | | cget(self._c_pointers, n, pointer(values)) |
6679 | | OSError: exception: access violation reading 0x0000000000041468 |
6680 | | |
6681 | | OSError: exception: access violation reading 0x0000000000041468 |
6682 | | |
6683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6684 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6685 | | cget(self._c_pointers, n, pointer(values)) |
6686 | | |
6687 | | See log for complete Python traceback. |
6688 | | |
6689 | | Traceback (most recent call last): |
6690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6691 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6692 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6694 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6695 | | mouse_pause_tracking |
6696 | | self._mouse_pause() |
6697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6698 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6699 | | m.pause(self._mouse_pause_position) |
6700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6701 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6702 | | p = self.view.picked_object(x, y) |
6703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6704 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6705 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6706 | | beyond, |
6707 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6708 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6709 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6711 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6712 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6714 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6715 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6716 | | exclude=exclude) |
6717 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6718 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6719 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6720 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6721 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6722 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6724 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6725 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6726 | | exclude=exclude) |
6727 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6728 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6729 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6730 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6731 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6732 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6734 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6735 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6737 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6738 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6740 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6741 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6742 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6743 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6744 | | cget(self._c_pointers, n, pointer(values)) |
6745 | | OSError: exception: access violation reading 0x0000000000041468 |
6746 | | |
6747 | | OSError: exception: access violation reading 0x0000000000041468 |
6748 | | |
6749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6750 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6751 | | cget(self._c_pointers, n, pointer(values)) |
6752 | | |
6753 | | See log for complete Python traceback. |
6754 | | |
6755 | | Traceback (most recent call last): |
6756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6757 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6758 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6760 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6761 | | mouse_pause_tracking |
6762 | | self._mouse_pause() |
6763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6764 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6765 | | m.pause(self._mouse_pause_position) |
6766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6767 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6768 | | p = self.view.picked_object(x, y) |
6769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6770 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6771 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6772 | | beyond, |
6773 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6774 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6775 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6777 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6778 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6780 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6781 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6782 | | exclude=exclude) |
6783 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6784 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6785 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6786 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6787 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6788 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6790 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6791 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6792 | | exclude=exclude) |
6793 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6794 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6795 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6796 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6797 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6798 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6800 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6801 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6803 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6804 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6806 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6807 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6808 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6809 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6810 | | cget(self._c_pointers, n, pointer(values)) |
6811 | | OSError: exception: access violation reading 0x0000000000041468 |
6812 | | |
6813 | | OSError: exception: access violation reading 0x0000000000041468 |
6814 | | |
6815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6816 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6817 | | cget(self._c_pointers, n, pointer(values)) |
6818 | | |
6819 | | See log for complete Python traceback. |
6820 | | |
6821 | | Traceback (most recent call last): |
6822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6823 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6824 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6826 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6827 | | mouse_pause_tracking |
6828 | | self._mouse_pause() |
6829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6830 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6831 | | m.pause(self._mouse_pause_position) |
6832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6833 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6834 | | p = self.view.picked_object(x, y) |
6835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6836 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6837 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6838 | | beyond, |
6839 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6840 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6841 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6843 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6844 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6846 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6847 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6848 | | exclude=exclude) |
6849 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6850 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6851 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6852 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6853 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6854 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6856 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6857 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6858 | | exclude=exclude) |
6859 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6860 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6861 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6862 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6863 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6864 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6866 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6867 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6869 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6870 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6872 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6873 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6874 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6875 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6876 | | cget(self._c_pointers, n, pointer(values)) |
6877 | | OSError: exception: access violation reading 0x0000000000041468 |
6878 | | |
6879 | | OSError: exception: access violation reading 0x0000000000041468 |
6880 | | |
6881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6882 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6883 | | cget(self._c_pointers, n, pointer(values)) |
6884 | | |
6885 | | See log for complete Python traceback. |
6886 | | |
6887 | | Traceback (most recent call last): |
6888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6889 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6890 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6892 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6893 | | mouse_pause_tracking |
6894 | | self._mouse_pause() |
6895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6896 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6897 | | m.pause(self._mouse_pause_position) |
6898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6899 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6900 | | p = self.view.picked_object(x, y) |
6901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6902 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6903 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6904 | | beyond, |
6905 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6906 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6907 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6909 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6910 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6912 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6913 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6914 | | exclude=exclude) |
6915 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6916 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6917 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6918 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6919 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6920 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6922 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6923 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6924 | | exclude=exclude) |
6925 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6926 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6927 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6928 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6929 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6930 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6932 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6933 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
6934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6935 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
6936 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
6937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6938 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
6939 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
6940 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6941 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6942 | | cget(self._c_pointers, n, pointer(values)) |
6943 | | OSError: exception: access violation reading 0x0000000000041468 |
6944 | | |
6945 | | OSError: exception: access violation reading 0x0000000000041468 |
6946 | | |
6947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6948 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
6949 | | cget(self._c_pointers, n, pointer(values)) |
6950 | | |
6951 | | See log for complete Python traceback. |
6952 | | |
6953 | | Traceback (most recent call last): |
6954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6955 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
6956 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
6957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6958 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
6959 | | mouse_pause_tracking |
6960 | | self._mouse_pause() |
6961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6962 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
6963 | | m.pause(self._mouse_pause_position) |
6964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6965 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
6966 | | p = self.view.picked_object(x, y) |
6967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6968 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
6969 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
6970 | | beyond, |
6971 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6972 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
6973 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
6974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6975 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6976 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6978 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6979 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6980 | | exclude=exclude) |
6981 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6982 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6983 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6984 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6985 | | packages\chimerax\core\models.py", line 126, in first_intercept |
6986 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
6987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6988 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
6989 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
6990 | | exclude=exclude) |
6991 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6992 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
6993 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
6994 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6995 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
6996 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
6997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
6998 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
6999 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7001 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7002 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7004 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7005 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7006 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7007 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7008 | | cget(self._c_pointers, n, pointer(values)) |
7009 | | OSError: exception: access violation reading 0x0000000000041468 |
7010 | | |
7011 | | OSError: exception: access violation reading 0x0000000000041468 |
7012 | | |
7013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7014 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7015 | | cget(self._c_pointers, n, pointer(values)) |
7016 | | |
7017 | | See log for complete Python traceback. |
7018 | | |
7019 | | Traceback (most recent call last): |
7020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7021 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7022 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7024 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7025 | | mouse_pause_tracking |
7026 | | self._mouse_pause() |
7027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7028 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7029 | | m.pause(self._mouse_pause_position) |
7030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7031 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7032 | | p = self.view.picked_object(x, y) |
7033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7034 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7035 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7036 | | beyond, |
7037 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7038 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7039 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7041 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7042 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7044 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7045 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7046 | | exclude=exclude) |
7047 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7048 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7049 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7050 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7051 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7052 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7054 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7055 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7056 | | exclude=exclude) |
7057 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7058 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7059 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7060 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7061 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7062 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7064 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7065 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7067 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7068 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7070 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7071 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7072 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7073 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7074 | | cget(self._c_pointers, n, pointer(values)) |
7075 | | OSError: exception: access violation reading 0x0000000000041468 |
7076 | | |
7077 | | OSError: exception: access violation reading 0x0000000000041468 |
7078 | | |
7079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7080 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7081 | | cget(self._c_pointers, n, pointer(values)) |
7082 | | |
7083 | | See log for complete Python traceback. |
7084 | | |
7085 | | Traceback (most recent call last): |
7086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7087 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7088 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7090 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7091 | | mouse_pause_tracking |
7092 | | self._mouse_pause() |
7093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7094 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7095 | | m.pause(self._mouse_pause_position) |
7096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7097 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7098 | | p = self.view.picked_object(x, y) |
7099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7100 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7101 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7102 | | beyond, |
7103 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7104 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7105 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7107 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7108 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7110 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7111 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7112 | | exclude=exclude) |
7113 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7114 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7115 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7116 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7117 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7118 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7120 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7121 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7122 | | exclude=exclude) |
7123 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7124 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7125 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7126 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7127 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7128 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7130 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7131 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7133 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7134 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7136 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7137 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7138 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7139 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7140 | | cget(self._c_pointers, n, pointer(values)) |
7141 | | OSError: exception: access violation reading 0x0000000000041468 |
7142 | | |
7143 | | OSError: exception: access violation reading 0x0000000000041468 |
7144 | | |
7145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7146 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7147 | | cget(self._c_pointers, n, pointer(values)) |
7148 | | |
7149 | | See log for complete Python traceback. |
7150 | | |
7151 | | Traceback (most recent call last): |
7152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7153 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7154 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7156 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7157 | | mouse_pause_tracking |
7158 | | self._mouse_pause() |
7159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7160 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7161 | | m.pause(self._mouse_pause_position) |
7162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7163 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7164 | | p = self.view.picked_object(x, y) |
7165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7166 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7167 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7168 | | beyond, |
7169 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7170 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7171 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7173 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7174 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7176 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7177 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7178 | | exclude=exclude) |
7179 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7180 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7181 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7182 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7183 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7184 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7186 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7187 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7188 | | exclude=exclude) |
7189 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7190 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7191 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7192 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7193 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7194 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7196 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7197 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7198 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7199 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7200 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7202 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7203 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7204 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7205 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7206 | | cget(self._c_pointers, n, pointer(values)) |
7207 | | OSError: exception: access violation reading 0x0000000000041468 |
7208 | | |
7209 | | OSError: exception: access violation reading 0x0000000000041468 |
7210 | | |
7211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7212 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7213 | | cget(self._c_pointers, n, pointer(values)) |
7214 | | |
7215 | | See log for complete Python traceback. |
7216 | | |
7217 | | Traceback (most recent call last): |
7218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7219 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7220 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7222 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7223 | | mouse_pause_tracking |
7224 | | self._mouse_pause() |
7225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7226 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7227 | | m.pause(self._mouse_pause_position) |
7228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7229 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7230 | | p = self.view.picked_object(x, y) |
7231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7232 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7233 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7234 | | beyond, |
7235 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7236 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7237 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7239 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7240 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7242 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7243 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7244 | | exclude=exclude) |
7245 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7246 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7247 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7248 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7249 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7250 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7252 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7253 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7254 | | exclude=exclude) |
7255 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7256 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7257 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7258 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7259 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7260 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7262 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7263 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7264 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7265 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7266 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7268 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7269 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7270 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7271 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7272 | | cget(self._c_pointers, n, pointer(values)) |
7273 | | OSError: exception: access violation reading 0x0000000000041468 |
7274 | | |
7275 | | OSError: exception: access violation reading 0x0000000000041468 |
7276 | | |
7277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7278 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7279 | | cget(self._c_pointers, n, pointer(values)) |
7280 | | |
7281 | | See log for complete Python traceback. |
7282 | | |
7283 | | Traceback (most recent call last): |
7284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7285 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7286 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7288 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7289 | | mouse_pause_tracking |
7290 | | self._mouse_pause() |
7291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7292 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7293 | | m.pause(self._mouse_pause_position) |
7294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7295 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7296 | | p = self.view.picked_object(x, y) |
7297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7298 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7299 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7300 | | beyond, |
7301 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7302 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7303 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7305 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7306 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7308 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7309 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7310 | | exclude=exclude) |
7311 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7312 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7313 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7314 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7315 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7316 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7318 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7319 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7320 | | exclude=exclude) |
7321 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7322 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7323 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7324 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7325 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7326 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7328 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7329 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7330 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7331 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7332 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7334 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7335 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7336 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7337 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7338 | | cget(self._c_pointers, n, pointer(values)) |
7339 | | OSError: exception: access violation reading 0x0000000000041468 |
7340 | | |
7341 | | OSError: exception: access violation reading 0x0000000000041468 |
7342 | | |
7343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7344 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7345 | | cget(self._c_pointers, n, pointer(values)) |
7346 | | |
7347 | | See log for complete Python traceback. |
7348 | | |
7349 | | Traceback (most recent call last): |
7350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7351 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7352 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7354 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7355 | | mouse_pause_tracking |
7356 | | self._mouse_pause() |
7357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7358 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7359 | | m.pause(self._mouse_pause_position) |
7360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7361 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7362 | | p = self.view.picked_object(x, y) |
7363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7364 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7365 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7366 | | beyond, |
7367 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7368 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7369 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7371 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7372 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7374 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7375 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7376 | | exclude=exclude) |
7377 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7378 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7379 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7380 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7381 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7382 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7384 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7385 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7386 | | exclude=exclude) |
7387 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7388 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7389 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7390 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7391 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7392 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7394 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7395 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7396 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7397 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7398 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7400 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7401 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7402 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7403 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7404 | | cget(self._c_pointers, n, pointer(values)) |
7405 | | OSError: exception: access violation reading 0x0000000000041468 |
7406 | | |
7407 | | OSError: exception: access violation reading 0x0000000000041468 |
7408 | | |
7409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7410 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7411 | | cget(self._c_pointers, n, pointer(values)) |
7412 | | |
7413 | | See log for complete Python traceback. |
7414 | | |
7415 | | Traceback (most recent call last): |
7416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7417 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7418 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7420 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7421 | | mouse_pause_tracking |
7422 | | self._mouse_pause() |
7423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7424 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7425 | | m.pause(self._mouse_pause_position) |
7426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7427 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7428 | | p = self.view.picked_object(x, y) |
7429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7430 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7431 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7432 | | beyond, |
7433 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7434 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7435 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7437 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7438 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7440 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7441 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7442 | | exclude=exclude) |
7443 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7444 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7445 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7446 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7447 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7448 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7450 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7451 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7452 | | exclude=exclude) |
7453 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7454 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7455 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7456 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7457 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7458 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7460 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7461 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7462 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7463 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7464 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7466 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7467 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7468 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7469 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7470 | | cget(self._c_pointers, n, pointer(values)) |
7471 | | OSError: exception: access violation reading 0x0000000000041468 |
7472 | | |
7473 | | OSError: exception: access violation reading 0x0000000000041468 |
7474 | | |
7475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7476 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7477 | | cget(self._c_pointers, n, pointer(values)) |
7478 | | |
7479 | | See log for complete Python traceback. |
7480 | | |
7481 | | Traceback (most recent call last): |
7482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7483 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7484 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7486 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7487 | | mouse_pause_tracking |
7488 | | self._mouse_pause() |
7489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7490 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7491 | | m.pause(self._mouse_pause_position) |
7492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7493 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7494 | | p = self.view.picked_object(x, y) |
7495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7496 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7497 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7498 | | beyond, |
7499 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7500 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7501 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7503 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7504 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7506 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7507 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7508 | | exclude=exclude) |
7509 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7510 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7511 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7512 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7513 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7514 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7516 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7517 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7518 | | exclude=exclude) |
7519 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7520 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7521 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7522 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7523 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7524 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7526 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7527 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7528 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7529 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7530 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7532 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7533 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7534 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7535 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7536 | | cget(self._c_pointers, n, pointer(values)) |
7537 | | OSError: exception: access violation reading 0x0000000000041468 |
7538 | | |
7539 | | OSError: exception: access violation reading 0x0000000000041468 |
7540 | | |
7541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7542 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7543 | | cget(self._c_pointers, n, pointer(values)) |
7544 | | |
7545 | | See log for complete Python traceback. |
7546 | | |
7547 | | Traceback (most recent call last): |
7548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7549 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7550 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7552 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7553 | | mouse_pause_tracking |
7554 | | self._mouse_pause() |
7555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7556 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7557 | | m.pause(self._mouse_pause_position) |
7558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7559 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7560 | | p = self.view.picked_object(x, y) |
7561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7562 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7563 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7564 | | beyond, |
7565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7566 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7567 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7569 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7570 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7572 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7573 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7574 | | exclude=exclude) |
7575 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7576 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7577 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7579 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7580 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7582 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7583 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7584 | | exclude=exclude) |
7585 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7586 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7587 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7588 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7589 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7590 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7592 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7593 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7594 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7595 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7596 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7598 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7599 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7600 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7601 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7602 | | cget(self._c_pointers, n, pointer(values)) |
7603 | | OSError: exception: access violation reading 0x0000000000041468 |
7604 | | |
7605 | | OSError: exception: access violation reading 0x0000000000041468 |
7606 | | |
7607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7608 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7609 | | cget(self._c_pointers, n, pointer(values)) |
7610 | | |
7611 | | See log for complete Python traceback. |
7612 | | |
7613 | | Traceback (most recent call last): |
7614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7615 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7616 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7618 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7619 | | mouse_pause_tracking |
7620 | | self._mouse_pause() |
7621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7622 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7623 | | m.pause(self._mouse_pause_position) |
7624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7625 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7626 | | p = self.view.picked_object(x, y) |
7627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7628 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7629 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7630 | | beyond, |
7631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7632 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7633 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7635 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7636 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7638 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7639 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7640 | | exclude=exclude) |
7641 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7642 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7643 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7645 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7646 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7648 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7649 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7650 | | exclude=exclude) |
7651 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7652 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7653 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7654 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7655 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7656 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7658 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7659 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7660 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7661 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7662 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7664 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7665 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7666 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7667 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7668 | | cget(self._c_pointers, n, pointer(values)) |
7669 | | OSError: exception: access violation reading 0x0000000000041468 |
7670 | | |
7671 | | OSError: exception: access violation reading 0x0000000000041468 |
7672 | | |
7673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7674 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7675 | | cget(self._c_pointers, n, pointer(values)) |
7676 | | |
7677 | | See log for complete Python traceback. |
7678 | | |
7679 | | Traceback (most recent call last): |
7680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7681 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7682 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7684 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7685 | | mouse_pause_tracking |
7686 | | self._mouse_pause() |
7687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7688 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7689 | | m.pause(self._mouse_pause_position) |
7690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7691 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7692 | | p = self.view.picked_object(x, y) |
7693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7694 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7695 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7696 | | beyond, |
7697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7698 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7699 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7701 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7702 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7704 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7705 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7706 | | exclude=exclude) |
7707 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7708 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7709 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7711 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7712 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7714 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7715 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7716 | | exclude=exclude) |
7717 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7718 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7719 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7720 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7721 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7722 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7724 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7725 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7726 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7727 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7728 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7730 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7731 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7732 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7733 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7734 | | cget(self._c_pointers, n, pointer(values)) |
7735 | | OSError: exception: access violation reading 0x0000000000041468 |
7736 | | |
7737 | | OSError: exception: access violation reading 0x0000000000041468 |
7738 | | |
7739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7740 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7741 | | cget(self._c_pointers, n, pointer(values)) |
7742 | | |
7743 | | See log for complete Python traceback. |
7744 | | |
7745 | | Traceback (most recent call last): |
7746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7747 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7748 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7750 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7751 | | mouse_pause_tracking |
7752 | | self._mouse_pause() |
7753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7754 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7755 | | m.pause(self._mouse_pause_position) |
7756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7757 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7758 | | p = self.view.picked_object(x, y) |
7759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7760 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7761 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7762 | | beyond, |
7763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7764 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7765 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7767 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7768 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7770 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7771 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7772 | | exclude=exclude) |
7773 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7774 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7775 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7777 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7778 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7780 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7781 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7782 | | exclude=exclude) |
7783 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7784 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7785 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7786 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7787 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7788 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7790 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7791 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7792 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7793 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7794 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7796 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7797 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7798 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7799 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7800 | | cget(self._c_pointers, n, pointer(values)) |
7801 | | OSError: exception: access violation reading 0x0000000000041468 |
7802 | | |
7803 | | OSError: exception: access violation reading 0x0000000000041468 |
7804 | | |
7805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7806 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7807 | | cget(self._c_pointers, n, pointer(values)) |
7808 | | |
7809 | | See log for complete Python traceback. |
7810 | | |
7811 | | Traceback (most recent call last): |
7812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7813 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7814 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7816 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7817 | | mouse_pause_tracking |
7818 | | self._mouse_pause() |
7819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7820 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7821 | | m.pause(self._mouse_pause_position) |
7822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7823 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7824 | | p = self.view.picked_object(x, y) |
7825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7826 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7827 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7828 | | beyond, |
7829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7830 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7831 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7833 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7834 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7836 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7837 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7838 | | exclude=exclude) |
7839 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7840 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7841 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7843 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7844 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7846 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7847 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7848 | | exclude=exclude) |
7849 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7850 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7851 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7852 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7853 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7854 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7856 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7857 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7858 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7859 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7860 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7862 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7863 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7864 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7865 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7866 | | cget(self._c_pointers, n, pointer(values)) |
7867 | | OSError: exception: access violation reading 0x0000000000041468 |
7868 | | |
7869 | | OSError: exception: access violation reading 0x0000000000041468 |
7870 | | |
7871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7872 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7873 | | cget(self._c_pointers, n, pointer(values)) |
7874 | | |
7875 | | See log for complete Python traceback. |
7876 | | |
7877 | | Traceback (most recent call last): |
7878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7879 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7880 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7882 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7883 | | mouse_pause_tracking |
7884 | | self._mouse_pause() |
7885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7886 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7887 | | m.pause(self._mouse_pause_position) |
7888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7889 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7890 | | p = self.view.picked_object(x, y) |
7891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7892 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7893 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7894 | | beyond, |
7895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7896 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7897 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7899 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7900 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7902 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7903 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7904 | | exclude=exclude) |
7905 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7906 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7907 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7909 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7910 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7912 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7913 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7914 | | exclude=exclude) |
7915 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7916 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7917 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7918 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7919 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7920 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7922 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7923 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7924 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7925 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7926 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7928 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7929 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7930 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7931 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7932 | | cget(self._c_pointers, n, pointer(values)) |
7933 | | OSError: exception: access violation reading 0x0000000000041468 |
7934 | | |
7935 | | OSError: exception: access violation reading 0x0000000000041468 |
7936 | | |
7937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7938 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7939 | | cget(self._c_pointers, n, pointer(values)) |
7940 | | |
7941 | | See log for complete Python traceback. |
7942 | | |
7943 | | Traceback (most recent call last): |
7944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7945 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
7946 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
7947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7948 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
7949 | | mouse_pause_tracking |
7950 | | self._mouse_pause() |
7951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7952 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
7953 | | m.pause(self._mouse_pause_position) |
7954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7955 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
7956 | | p = self.view.picked_object(x, y) |
7957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7958 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
7959 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
7960 | | beyond, |
7961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7962 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
7963 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
7964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7965 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7966 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7968 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7969 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7970 | | exclude=exclude) |
7971 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7972 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7973 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7975 | | packages\chimerax\core\models.py", line 126, in first_intercept |
7976 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
7977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7978 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
7979 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
7980 | | exclude=exclude) |
7981 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7982 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
7983 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
7984 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7985 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
7986 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
7987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7988 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
7989 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
7990 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7991 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
7992 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
7993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7994 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
7995 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
7996 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
7997 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
7998 | | cget(self._c_pointers, n, pointer(values)) |
7999 | | OSError: exception: access violation reading 0x0000000000041468 |
8000 | | |
8001 | | OSError: exception: access violation reading 0x0000000000041468 |
8002 | | |
8003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8004 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8005 | | cget(self._c_pointers, n, pointer(values)) |
8006 | | |
8007 | | See log for complete Python traceback. |
8008 | | |
8009 | | Traceback (most recent call last): |
8010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8011 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8012 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8014 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8015 | | mouse_pause_tracking |
8016 | | self._mouse_pause() |
8017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8018 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8019 | | m.pause(self._mouse_pause_position) |
8020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8021 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8022 | | p = self.view.picked_object(x, y) |
8023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8024 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8025 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8026 | | beyond, |
8027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8028 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8029 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8031 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8032 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8034 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8035 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8036 | | exclude=exclude) |
8037 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8038 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8039 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8041 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8042 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8044 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8045 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8046 | | exclude=exclude) |
8047 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8048 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8049 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8050 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8051 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8052 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8054 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8055 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8056 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8057 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8058 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8060 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8061 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8062 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8063 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8064 | | cget(self._c_pointers, n, pointer(values)) |
8065 | | OSError: exception: access violation reading 0x0000000000041468 |
8066 | | |
8067 | | OSError: exception: access violation reading 0x0000000000041468 |
8068 | | |
8069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8070 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8071 | | cget(self._c_pointers, n, pointer(values)) |
8072 | | |
8073 | | See log for complete Python traceback. |
8074 | | |
8075 | | Traceback (most recent call last): |
8076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8077 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8078 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8080 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8081 | | mouse_pause_tracking |
8082 | | self._mouse_pause() |
8083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8084 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8085 | | m.pause(self._mouse_pause_position) |
8086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8087 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8088 | | p = self.view.picked_object(x, y) |
8089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8090 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8091 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8092 | | beyond, |
8093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8094 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8095 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8097 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8098 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8100 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8101 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8102 | | exclude=exclude) |
8103 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8104 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8105 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8107 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8108 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8110 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8111 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8112 | | exclude=exclude) |
8113 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8114 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8115 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8116 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8117 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8118 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8120 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8121 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8122 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8123 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8124 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8126 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8127 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8128 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8129 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8130 | | cget(self._c_pointers, n, pointer(values)) |
8131 | | OSError: exception: access violation reading 0x0000000000041468 |
8132 | | |
8133 | | OSError: exception: access violation reading 0x0000000000041468 |
8134 | | |
8135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8136 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8137 | | cget(self._c_pointers, n, pointer(values)) |
8138 | | |
8139 | | See log for complete Python traceback. |
8140 | | |
8141 | | Traceback (most recent call last): |
8142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8143 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8144 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8146 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8147 | | mouse_pause_tracking |
8148 | | self._mouse_pause() |
8149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8150 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8151 | | m.pause(self._mouse_pause_position) |
8152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8153 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8154 | | p = self.view.picked_object(x, y) |
8155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8156 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8157 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8158 | | beyond, |
8159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8160 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8161 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8163 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8164 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8166 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8167 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8168 | | exclude=exclude) |
8169 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8170 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8171 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8173 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8174 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8176 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8177 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8178 | | exclude=exclude) |
8179 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8180 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8181 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8182 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8183 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8184 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8186 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8187 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8188 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8189 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8190 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8191 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8192 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8193 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8194 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8195 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8196 | | cget(self._c_pointers, n, pointer(values)) |
8197 | | OSError: exception: access violation reading 0x0000000000041468 |
8198 | | |
8199 | | OSError: exception: access violation reading 0x0000000000041468 |
8200 | | |
8201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8202 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8203 | | cget(self._c_pointers, n, pointer(values)) |
8204 | | |
8205 | | See log for complete Python traceback. |
8206 | | |
8207 | | Traceback (most recent call last): |
8208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8209 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8210 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8212 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8213 | | mouse_pause_tracking |
8214 | | self._mouse_pause() |
8215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8216 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8217 | | m.pause(self._mouse_pause_position) |
8218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8219 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8220 | | p = self.view.picked_object(x, y) |
8221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8222 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8223 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8224 | | beyond, |
8225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8226 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8227 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8229 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8230 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8232 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8233 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8234 | | exclude=exclude) |
8235 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8236 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8237 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8239 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8240 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8242 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8243 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8244 | | exclude=exclude) |
8245 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8246 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8247 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8248 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8249 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8250 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8252 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8253 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8254 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8255 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8256 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8257 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8258 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8259 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8260 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8261 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8262 | | cget(self._c_pointers, n, pointer(values)) |
8263 | | OSError: exception: access violation reading 0x0000000000041468 |
8264 | | |
8265 | | OSError: exception: access violation reading 0x0000000000041468 |
8266 | | |
8267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8268 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8269 | | cget(self._c_pointers, n, pointer(values)) |
8270 | | |
8271 | | See log for complete Python traceback. |
8272 | | |
8273 | | Traceback (most recent call last): |
8274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8275 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8276 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8278 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8279 | | mouse_pause_tracking |
8280 | | self._mouse_pause() |
8281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8282 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8283 | | m.pause(self._mouse_pause_position) |
8284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8285 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8286 | | p = self.view.picked_object(x, y) |
8287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8288 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8289 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8290 | | beyond, |
8291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8292 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8293 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8295 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8296 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8298 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8299 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8300 | | exclude=exclude) |
8301 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8302 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8303 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8305 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8306 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8308 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8309 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8310 | | exclude=exclude) |
8311 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8312 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8313 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8314 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8315 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8316 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8318 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8319 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8320 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8321 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8322 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8323 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8324 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8325 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8326 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8327 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8328 | | cget(self._c_pointers, n, pointer(values)) |
8329 | | OSError: exception: access violation reading 0x0000000000041468 |
8330 | | |
8331 | | OSError: exception: access violation reading 0x0000000000041468 |
8332 | | |
8333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8334 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8335 | | cget(self._c_pointers, n, pointer(values)) |
8336 | | |
8337 | | See log for complete Python traceback. |
8338 | | |
8339 | | Traceback (most recent call last): |
8340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8341 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8342 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8344 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8345 | | mouse_pause_tracking |
8346 | | self._mouse_pause() |
8347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8348 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8349 | | m.pause(self._mouse_pause_position) |
8350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8351 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8352 | | p = self.view.picked_object(x, y) |
8353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8354 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8355 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8356 | | beyond, |
8357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8358 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8359 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8361 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8362 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8364 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8365 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8366 | | exclude=exclude) |
8367 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8368 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8369 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8371 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8372 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8374 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8375 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8376 | | exclude=exclude) |
8377 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8378 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8379 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8380 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8381 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8382 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8384 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8385 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8386 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8387 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8388 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8389 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8390 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8391 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8392 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8393 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8394 | | cget(self._c_pointers, n, pointer(values)) |
8395 | | OSError: exception: access violation reading 0x0000000000041468 |
8396 | | |
8397 | | OSError: exception: access violation reading 0x0000000000041468 |
8398 | | |
8399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8400 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8401 | | cget(self._c_pointers, n, pointer(values)) |
8402 | | |
8403 | | See log for complete Python traceback. |
8404 | | |
8405 | | Traceback (most recent call last): |
8406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8407 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8408 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8410 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8411 | | mouse_pause_tracking |
8412 | | self._mouse_pause() |
8413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8414 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8415 | | m.pause(self._mouse_pause_position) |
8416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8417 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8418 | | p = self.view.picked_object(x, y) |
8419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8420 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8421 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8422 | | beyond, |
8423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8424 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8425 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8427 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8428 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8430 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8431 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8432 | | exclude=exclude) |
8433 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8434 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8435 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8437 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8438 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8440 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8441 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8442 | | exclude=exclude) |
8443 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8444 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8445 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8446 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8447 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8448 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8450 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8451 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8452 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8453 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8454 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8455 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8456 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8457 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8458 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8459 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8460 | | cget(self._c_pointers, n, pointer(values)) |
8461 | | OSError: exception: access violation reading 0x0000000000041468 |
8462 | | |
8463 | | OSError: exception: access violation reading 0x0000000000041468 |
8464 | | |
8465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8466 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8467 | | cget(self._c_pointers, n, pointer(values)) |
8468 | | |
8469 | | See log for complete Python traceback. |
8470 | | |
8471 | | Traceback (most recent call last): |
8472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8473 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8474 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8476 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8477 | | mouse_pause_tracking |
8478 | | self._mouse_pause() |
8479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8480 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8481 | | m.pause(self._mouse_pause_position) |
8482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8483 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8484 | | p = self.view.picked_object(x, y) |
8485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8486 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8487 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8488 | | beyond, |
8489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8490 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8491 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8493 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8494 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8496 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8497 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8498 | | exclude=exclude) |
8499 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8500 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8501 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8503 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8504 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8506 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8507 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8508 | | exclude=exclude) |
8509 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8510 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8511 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8512 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8513 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8514 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8516 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8517 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8518 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8519 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8520 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8521 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8522 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8523 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8524 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8525 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8526 | | cget(self._c_pointers, n, pointer(values)) |
8527 | | OSError: exception: access violation reading 0x0000000000041468 |
8528 | | |
8529 | | OSError: exception: access violation reading 0x0000000000041468 |
8530 | | |
8531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8532 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8533 | | cget(self._c_pointers, n, pointer(values)) |
8534 | | |
8535 | | See log for complete Python traceback. |
8536 | | |
8537 | | Traceback (most recent call last): |
8538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8539 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8540 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8542 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8543 | | mouse_pause_tracking |
8544 | | self._mouse_pause() |
8545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8546 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8547 | | m.pause(self._mouse_pause_position) |
8548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8549 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8550 | | p = self.view.picked_object(x, y) |
8551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8552 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8553 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8554 | | beyond, |
8555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8556 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8557 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8559 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8560 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8562 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8563 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8564 | | exclude=exclude) |
8565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8566 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8567 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8569 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8570 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8572 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8573 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8574 | | exclude=exclude) |
8575 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8576 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8577 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8578 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8579 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8580 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8582 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8583 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8584 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8585 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8586 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8587 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8588 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8589 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8590 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8591 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8592 | | cget(self._c_pointers, n, pointer(values)) |
8593 | | OSError: exception: access violation reading 0x0000000000041468 |
8594 | | |
8595 | | OSError: exception: access violation reading 0x0000000000041468 |
8596 | | |
8597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8598 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8599 | | cget(self._c_pointers, n, pointer(values)) |
8600 | | |
8601 | | See log for complete Python traceback. |
8602 | | |
8603 | | Traceback (most recent call last): |
8604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8605 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8606 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8608 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8609 | | mouse_pause_tracking |
8610 | | self._mouse_pause() |
8611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8612 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8613 | | m.pause(self._mouse_pause_position) |
8614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8615 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8616 | | p = self.view.picked_object(x, y) |
8617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8618 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8619 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8620 | | beyond, |
8621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8622 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8623 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8625 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8626 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8628 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8629 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8630 | | exclude=exclude) |
8631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8632 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8633 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8635 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8636 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8638 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8639 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8640 | | exclude=exclude) |
8641 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8642 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8643 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8644 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8645 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8646 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8648 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8649 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8650 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8651 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8652 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8653 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8654 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8655 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8656 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8657 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8658 | | cget(self._c_pointers, n, pointer(values)) |
8659 | | OSError: exception: access violation reading 0x0000000000041468 |
8660 | | |
8661 | | OSError: exception: access violation reading 0x0000000000041468 |
8662 | | |
8663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8664 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8665 | | cget(self._c_pointers, n, pointer(values)) |
8666 | | |
8667 | | See log for complete Python traceback. |
8668 | | |
8669 | | Traceback (most recent call last): |
8670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8671 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8672 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8674 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8675 | | mouse_pause_tracking |
8676 | | self._mouse_pause() |
8677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8678 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8679 | | m.pause(self._mouse_pause_position) |
8680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8681 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8682 | | p = self.view.picked_object(x, y) |
8683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8684 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8685 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8686 | | beyond, |
8687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8688 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8689 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8691 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8692 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8694 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8695 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8696 | | exclude=exclude) |
8697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8698 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8699 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8701 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8702 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8704 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8705 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8706 | | exclude=exclude) |
8707 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8708 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8709 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8710 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8711 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8712 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8714 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8715 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8716 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8717 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8718 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8719 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8720 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8721 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8722 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8723 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8724 | | cget(self._c_pointers, n, pointer(values)) |
8725 | | OSError: exception: access violation reading 0x0000000000041468 |
8726 | | |
8727 | | OSError: exception: access violation reading 0x0000000000041468 |
8728 | | |
8729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8730 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8731 | | cget(self._c_pointers, n, pointer(values)) |
8732 | | |
8733 | | See log for complete Python traceback. |
8734 | | |
8735 | | Traceback (most recent call last): |
8736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8737 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8738 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8740 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8741 | | mouse_pause_tracking |
8742 | | self._mouse_pause() |
8743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8744 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8745 | | m.pause(self._mouse_pause_position) |
8746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8747 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8748 | | p = self.view.picked_object(x, y) |
8749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8750 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8751 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8752 | | beyond, |
8753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8754 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8755 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8757 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8758 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8760 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8761 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8762 | | exclude=exclude) |
8763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8764 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8765 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8767 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8768 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8770 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8771 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8772 | | exclude=exclude) |
8773 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8774 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8775 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8776 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8777 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8778 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8780 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8781 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8782 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8783 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8784 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8785 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8786 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8787 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8788 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8789 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8790 | | cget(self._c_pointers, n, pointer(values)) |
8791 | | OSError: exception: access violation reading 0x0000000000041468 |
8792 | | |
8793 | | OSError: exception: access violation reading 0x0000000000041468 |
8794 | | |
8795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8796 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8797 | | cget(self._c_pointers, n, pointer(values)) |
8798 | | |
8799 | | See log for complete Python traceback. |
8800 | | |
8801 | | Traceback (most recent call last): |
8802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8803 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8804 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8806 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8807 | | mouse_pause_tracking |
8808 | | self._mouse_pause() |
8809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8810 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8811 | | m.pause(self._mouse_pause_position) |
8812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8813 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8814 | | p = self.view.picked_object(x, y) |
8815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8816 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8817 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8818 | | beyond, |
8819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8820 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8821 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8823 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8824 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8826 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8827 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8828 | | exclude=exclude) |
8829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8830 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8831 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8833 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8834 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8836 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8837 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8838 | | exclude=exclude) |
8839 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8840 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8841 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8842 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8843 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8844 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8846 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8847 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8848 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8849 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8850 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8851 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8852 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8853 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8854 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8855 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8856 | | cget(self._c_pointers, n, pointer(values)) |
8857 | | OSError: exception: access violation reading 0x0000000000041468 |
8858 | | |
8859 | | OSError: exception: access violation reading 0x0000000000041468 |
8860 | | |
8861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8862 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8863 | | cget(self._c_pointers, n, pointer(values)) |
8864 | | |
8865 | | See log for complete Python traceback. |
8866 | | |
8867 | | Traceback (most recent call last): |
8868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8869 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8870 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8872 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8873 | | mouse_pause_tracking |
8874 | | self._mouse_pause() |
8875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8876 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8877 | | m.pause(self._mouse_pause_position) |
8878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8879 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8880 | | p = self.view.picked_object(x, y) |
8881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8882 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8883 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8884 | | beyond, |
8885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8886 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8887 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8889 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8890 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8892 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8893 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8894 | | exclude=exclude) |
8895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8896 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8897 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8899 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8900 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8902 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8903 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8904 | | exclude=exclude) |
8905 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8906 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8907 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8908 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8909 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8910 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8912 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8913 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8914 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8915 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8916 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8917 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8918 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8919 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8920 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8921 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8922 | | cget(self._c_pointers, n, pointer(values)) |
8923 | | OSError: exception: access violation reading 0x0000000000041468 |
8924 | | |
8925 | | OSError: exception: access violation reading 0x0000000000041468 |
8926 | | |
8927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8928 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8929 | | cget(self._c_pointers, n, pointer(values)) |
8930 | | |
8931 | | See log for complete Python traceback. |
8932 | | |
8933 | | Traceback (most recent call last): |
8934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8935 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
8936 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
8937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8938 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
8939 | | mouse_pause_tracking |
8940 | | self._mouse_pause() |
8941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8942 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
8943 | | m.pause(self._mouse_pause_position) |
8944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8945 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
8946 | | p = self.view.picked_object(x, y) |
8947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8948 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
8949 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
8950 | | beyond, |
8951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8952 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
8953 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
8954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8955 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8956 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8958 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8959 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8960 | | exclude=exclude) |
8961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8962 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8963 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8965 | | packages\chimerax\core\models.py", line 126, in first_intercept |
8966 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
8967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8968 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
8969 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
8970 | | exclude=exclude) |
8971 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8972 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
8973 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
8974 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8975 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
8976 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
8977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8978 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
8979 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
8980 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8981 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
8982 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
8983 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8984 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
8985 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
8986 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8987 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8988 | | cget(self._c_pointers, n, pointer(values)) |
8989 | | OSError: exception: access violation reading 0x0000000000041468 |
8990 | | |
8991 | | OSError: exception: access violation reading 0x0000000000041468 |
8992 | | |
8993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
8994 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
8995 | | cget(self._c_pointers, n, pointer(values)) |
8996 | | |
8997 | | See log for complete Python traceback. |
8998 | | |
8999 | | Traceback (most recent call last): |
9000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9001 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9002 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9004 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9005 | | mouse_pause_tracking |
9006 | | self._mouse_pause() |
9007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9008 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9009 | | m.pause(self._mouse_pause_position) |
9010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9011 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9012 | | p = self.view.picked_object(x, y) |
9013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9014 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9015 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9016 | | beyond, |
9017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9018 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9019 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9021 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9022 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9024 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9025 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9026 | | exclude=exclude) |
9027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9028 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9029 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9031 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9032 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9034 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9035 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9036 | | exclude=exclude) |
9037 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9038 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9039 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9040 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9041 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9042 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9044 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9045 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9046 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9047 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9048 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9049 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9050 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9051 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9052 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9053 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9054 | | cget(self._c_pointers, n, pointer(values)) |
9055 | | OSError: exception: access violation reading 0x0000000000041468 |
9056 | | |
9057 | | OSError: exception: access violation reading 0x0000000000041468 |
9058 | | |
9059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9060 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9061 | | cget(self._c_pointers, n, pointer(values)) |
9062 | | |
9063 | | See log for complete Python traceback. |
9064 | | |
9065 | | Traceback (most recent call last): |
9066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9067 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9068 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9070 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9071 | | mouse_pause_tracking |
9072 | | self._mouse_pause() |
9073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9074 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9075 | | m.pause(self._mouse_pause_position) |
9076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9077 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9078 | | p = self.view.picked_object(x, y) |
9079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9080 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9081 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9082 | | beyond, |
9083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9084 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9085 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9087 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9088 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9090 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9091 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9092 | | exclude=exclude) |
9093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9094 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9095 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9097 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9098 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9100 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9101 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9102 | | exclude=exclude) |
9103 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9104 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9105 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9106 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9107 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9108 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9110 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9111 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9112 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9113 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9114 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9115 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9116 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9117 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9118 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9119 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9120 | | cget(self._c_pointers, n, pointer(values)) |
9121 | | OSError: exception: access violation reading 0x0000000000041468 |
9122 | | |
9123 | | OSError: exception: access violation reading 0x0000000000041468 |
9124 | | |
9125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9126 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9127 | | cget(self._c_pointers, n, pointer(values)) |
9128 | | |
9129 | | See log for complete Python traceback. |
9130 | | |
9131 | | Traceback (most recent call last): |
9132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9133 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9134 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9136 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9137 | | mouse_pause_tracking |
9138 | | self._mouse_pause() |
9139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9140 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9141 | | m.pause(self._mouse_pause_position) |
9142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9143 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9144 | | p = self.view.picked_object(x, y) |
9145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9146 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9147 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9148 | | beyond, |
9149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9150 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9151 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9153 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9154 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9156 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9157 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9158 | | exclude=exclude) |
9159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9160 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9161 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9163 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9164 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9166 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9167 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9168 | | exclude=exclude) |
9169 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9170 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9171 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9172 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9173 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9174 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9176 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9177 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9178 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9179 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9180 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9181 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9182 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9183 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9184 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9185 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9186 | | cget(self._c_pointers, n, pointer(values)) |
9187 | | OSError: exception: access violation reading 0x0000000000041468 |
9188 | | |
9189 | | OSError: exception: access violation reading 0x0000000000041468 |
9190 | | |
9191 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9192 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9193 | | cget(self._c_pointers, n, pointer(values)) |
9194 | | |
9195 | | See log for complete Python traceback. |
9196 | | |
9197 | | Traceback (most recent call last): |
9198 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9199 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9200 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9202 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9203 | | mouse_pause_tracking |
9204 | | self._mouse_pause() |
9205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9206 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9207 | | m.pause(self._mouse_pause_position) |
9208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9209 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9210 | | p = self.view.picked_object(x, y) |
9211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9212 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9213 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9214 | | beyond, |
9215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9216 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9217 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9219 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9220 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9222 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9223 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9224 | | exclude=exclude) |
9225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9226 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9227 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9229 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9230 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9232 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9233 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9234 | | exclude=exclude) |
9235 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9236 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9237 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9238 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9239 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9240 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9242 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9243 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9244 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9245 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9246 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9247 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9248 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9249 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9250 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9251 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9252 | | cget(self._c_pointers, n, pointer(values)) |
9253 | | OSError: exception: access violation reading 0x0000000000041468 |
9254 | | |
9255 | | OSError: exception: access violation reading 0x0000000000041468 |
9256 | | |
9257 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9258 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9259 | | cget(self._c_pointers, n, pointer(values)) |
9260 | | |
9261 | | See log for complete Python traceback. |
9262 | | |
9263 | | Traceback (most recent call last): |
9264 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9265 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9266 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9268 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9269 | | mouse_pause_tracking |
9270 | | self._mouse_pause() |
9271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9272 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9273 | | m.pause(self._mouse_pause_position) |
9274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9275 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9276 | | p = self.view.picked_object(x, y) |
9277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9278 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9279 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9280 | | beyond, |
9281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9282 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9283 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9285 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9286 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9288 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9289 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9290 | | exclude=exclude) |
9291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9292 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9293 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9295 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9296 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9298 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9299 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9300 | | exclude=exclude) |
9301 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9302 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9303 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9304 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9305 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9306 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9308 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9309 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9310 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9311 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9312 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9313 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9314 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9315 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9316 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9317 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9318 | | cget(self._c_pointers, n, pointer(values)) |
9319 | | OSError: exception: access violation reading 0x0000000000041468 |
9320 | | |
9321 | | OSError: exception: access violation reading 0x0000000000041468 |
9322 | | |
9323 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9324 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9325 | | cget(self._c_pointers, n, pointer(values)) |
9326 | | |
9327 | | See log for complete Python traceback. |
9328 | | |
9329 | | Traceback (most recent call last): |
9330 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9331 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9332 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9334 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9335 | | mouse_pause_tracking |
9336 | | self._mouse_pause() |
9337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9338 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9339 | | m.pause(self._mouse_pause_position) |
9340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9341 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9342 | | p = self.view.picked_object(x, y) |
9343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9344 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9345 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9346 | | beyond, |
9347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9348 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9349 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9351 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9352 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9354 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9355 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9356 | | exclude=exclude) |
9357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9358 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9359 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9361 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9362 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9364 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9365 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9366 | | exclude=exclude) |
9367 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9368 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9369 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9370 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9371 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9372 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9374 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9375 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9376 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9377 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9378 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9379 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9380 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9381 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9382 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9383 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9384 | | cget(self._c_pointers, n, pointer(values)) |
9385 | | OSError: exception: access violation reading 0x0000000000041468 |
9386 | | |
9387 | | OSError: exception: access violation reading 0x0000000000041468 |
9388 | | |
9389 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9390 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9391 | | cget(self._c_pointers, n, pointer(values)) |
9392 | | |
9393 | | See log for complete Python traceback. |
9394 | | |
9395 | | Traceback (most recent call last): |
9396 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9397 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9398 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9400 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9401 | | mouse_pause_tracking |
9402 | | self._mouse_pause() |
9403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9404 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9405 | | m.pause(self._mouse_pause_position) |
9406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9407 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9408 | | p = self.view.picked_object(x, y) |
9409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9410 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9411 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9412 | | beyond, |
9413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9414 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9415 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9417 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9418 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9420 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9421 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9422 | | exclude=exclude) |
9423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9424 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9425 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9427 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9428 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9430 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9431 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9432 | | exclude=exclude) |
9433 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9434 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9435 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9436 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9437 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9438 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9440 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9441 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9442 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9443 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9444 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9445 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9446 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9447 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9448 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9449 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9450 | | cget(self._c_pointers, n, pointer(values)) |
9451 | | OSError: exception: access violation reading 0x0000000000041468 |
9452 | | |
9453 | | OSError: exception: access violation reading 0x0000000000041468 |
9454 | | |
9455 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9456 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9457 | | cget(self._c_pointers, n, pointer(values)) |
9458 | | |
9459 | | See log for complete Python traceback. |
9460 | | |
9461 | | Traceback (most recent call last): |
9462 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9463 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9464 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9466 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9467 | | mouse_pause_tracking |
9468 | | self._mouse_pause() |
9469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9470 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9471 | | m.pause(self._mouse_pause_position) |
9472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9473 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9474 | | p = self.view.picked_object(x, y) |
9475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9476 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9477 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9478 | | beyond, |
9479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9480 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9481 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9483 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9484 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9486 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9487 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9488 | | exclude=exclude) |
9489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9490 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9491 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9493 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9494 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9496 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9497 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9498 | | exclude=exclude) |
9499 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9500 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9501 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9502 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9503 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9504 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9506 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9507 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9508 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9509 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9510 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9511 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9512 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9513 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9514 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9515 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9516 | | cget(self._c_pointers, n, pointer(values)) |
9517 | | OSError: exception: access violation reading 0x0000000000041468 |
9518 | | |
9519 | | OSError: exception: access violation reading 0x0000000000041468 |
9520 | | |
9521 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9522 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9523 | | cget(self._c_pointers, n, pointer(values)) |
9524 | | |
9525 | | See log for complete Python traceback. |
9526 | | |
9527 | | Traceback (most recent call last): |
9528 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9529 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9530 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9532 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9533 | | mouse_pause_tracking |
9534 | | self._mouse_pause() |
9535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9536 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9537 | | m.pause(self._mouse_pause_position) |
9538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9539 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9540 | | p = self.view.picked_object(x, y) |
9541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9542 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9543 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9544 | | beyond, |
9545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9546 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9547 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9549 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9550 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9552 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9553 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9554 | | exclude=exclude) |
9555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9556 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9557 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9559 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9560 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9562 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9563 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9564 | | exclude=exclude) |
9565 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9566 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9567 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9568 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9569 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9570 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9572 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9573 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9574 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9575 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9576 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9577 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9578 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9579 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9580 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9581 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9582 | | cget(self._c_pointers, n, pointer(values)) |
9583 | | OSError: exception: access violation reading 0x0000000000041468 |
9584 | | |
9585 | | OSError: exception: access violation reading 0x0000000000041468 |
9586 | | |
9587 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9588 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9589 | | cget(self._c_pointers, n, pointer(values)) |
9590 | | |
9591 | | See log for complete Python traceback. |
9592 | | |
9593 | | Traceback (most recent call last): |
9594 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9595 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9596 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9598 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9599 | | mouse_pause_tracking |
9600 | | self._mouse_pause() |
9601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9602 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9603 | | m.pause(self._mouse_pause_position) |
9604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9605 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9606 | | p = self.view.picked_object(x, y) |
9607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9608 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9609 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9610 | | beyond, |
9611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9612 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9613 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9615 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9616 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9618 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9619 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9620 | | exclude=exclude) |
9621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9622 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9623 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9625 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9626 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9628 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9629 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9630 | | exclude=exclude) |
9631 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9632 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9633 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9634 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9635 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9636 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9638 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9639 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9640 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9641 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9642 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9643 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9644 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9645 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9646 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9647 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9648 | | cget(self._c_pointers, n, pointer(values)) |
9649 | | OSError: exception: access violation reading 0x0000000000041468 |
9650 | | |
9651 | | OSError: exception: access violation reading 0x0000000000041468 |
9652 | | |
9653 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9654 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9655 | | cget(self._c_pointers, n, pointer(values)) |
9656 | | |
9657 | | See log for complete Python traceback. |
9658 | | |
9659 | | Traceback (most recent call last): |
9660 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9661 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9662 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9664 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9665 | | mouse_pause_tracking |
9666 | | self._mouse_pause() |
9667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9668 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9669 | | m.pause(self._mouse_pause_position) |
9670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9671 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9672 | | p = self.view.picked_object(x, y) |
9673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9674 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9675 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9676 | | beyond, |
9677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9678 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9679 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9681 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9682 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9684 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9685 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9686 | | exclude=exclude) |
9687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9688 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9689 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9691 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9692 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9694 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9695 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9696 | | exclude=exclude) |
9697 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9698 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9699 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9700 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9701 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9702 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9704 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9705 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9706 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9707 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9708 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9709 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9710 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9711 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9712 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9713 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9714 | | cget(self._c_pointers, n, pointer(values)) |
9715 | | OSError: exception: access violation reading 0x0000000000041468 |
9716 | | |
9717 | | OSError: exception: access violation reading 0x0000000000041468 |
9718 | | |
9719 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9720 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9721 | | cget(self._c_pointers, n, pointer(values)) |
9722 | | |
9723 | | See log for complete Python traceback. |
9724 | | |
9725 | | Traceback (most recent call last): |
9726 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9727 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9728 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9730 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9731 | | mouse_pause_tracking |
9732 | | self._mouse_pause() |
9733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9734 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9735 | | m.pause(self._mouse_pause_position) |
9736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9737 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9738 | | p = self.view.picked_object(x, y) |
9739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9740 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9741 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9742 | | beyond, |
9743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9744 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9745 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9747 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9748 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9750 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9751 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9752 | | exclude=exclude) |
9753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9754 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9755 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9757 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9758 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9760 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9761 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9762 | | exclude=exclude) |
9763 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9764 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9765 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9766 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9767 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9768 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9770 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9771 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9772 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9773 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9774 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9775 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9776 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9777 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9778 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9779 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9780 | | cget(self._c_pointers, n, pointer(values)) |
9781 | | OSError: exception: access violation reading 0x0000000000041468 |
9782 | | |
9783 | | OSError: exception: access violation reading 0x0000000000041468 |
9784 | | |
9785 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9786 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9787 | | cget(self._c_pointers, n, pointer(values)) |
9788 | | |
9789 | | See log for complete Python traceback. |
9790 | | |
9791 | | Traceback (most recent call last): |
9792 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9793 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9794 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9796 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9797 | | mouse_pause_tracking |
9798 | | self._mouse_pause() |
9799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9800 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9801 | | m.pause(self._mouse_pause_position) |
9802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9803 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9804 | | p = self.view.picked_object(x, y) |
9805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9806 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9807 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9808 | | beyond, |
9809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9810 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9811 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9813 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9814 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9816 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9817 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9818 | | exclude=exclude) |
9819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9820 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9821 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9823 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9824 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9826 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9827 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9828 | | exclude=exclude) |
9829 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9830 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9831 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9832 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9833 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9834 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9836 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9837 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9838 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9839 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9840 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9841 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9842 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9843 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9844 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9845 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9846 | | cget(self._c_pointers, n, pointer(values)) |
9847 | | OSError: exception: access violation reading 0x0000000000041468 |
9848 | | |
9849 | | OSError: exception: access violation reading 0x0000000000041468 |
9850 | | |
9851 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9852 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9853 | | cget(self._c_pointers, n, pointer(values)) |
9854 | | |
9855 | | See log for complete Python traceback. |
9856 | | |
9857 | | Traceback (most recent call last): |
9858 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9859 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9860 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9862 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9863 | | mouse_pause_tracking |
9864 | | self._mouse_pause() |
9865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9866 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9867 | | m.pause(self._mouse_pause_position) |
9868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9869 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9870 | | p = self.view.picked_object(x, y) |
9871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9872 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9873 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9874 | | beyond, |
9875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9876 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9877 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9879 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9880 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9882 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9883 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9884 | | exclude=exclude) |
9885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9886 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9887 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9889 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9890 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9892 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9893 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9894 | | exclude=exclude) |
9895 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9896 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9897 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9898 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9899 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9900 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9902 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9903 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9904 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9905 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9906 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9907 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9908 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9909 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9910 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9911 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9912 | | cget(self._c_pointers, n, pointer(values)) |
9913 | | OSError: exception: access violation reading 0x0000000000041468 |
9914 | | |
9915 | | OSError: exception: access violation reading 0x0000000000041468 |
9916 | | |
9917 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9918 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9919 | | cget(self._c_pointers, n, pointer(values)) |
9920 | | |
9921 | | See log for complete Python traceback. |
9922 | | |
9923 | | Traceback (most recent call last): |
9924 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9925 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9926 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9928 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9929 | | mouse_pause_tracking |
9930 | | self._mouse_pause() |
9931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9932 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9933 | | m.pause(self._mouse_pause_position) |
9934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9935 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
9936 | | p = self.view.picked_object(x, y) |
9937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9938 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
9939 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
9940 | | beyond, |
9941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9942 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
9943 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
9944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9945 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9946 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9948 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9949 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9950 | | exclude=exclude) |
9951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9952 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9953 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9955 | | packages\chimerax\core\models.py", line 126, in first_intercept |
9956 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
9957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9958 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
9959 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
9960 | | exclude=exclude) |
9961 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9962 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
9963 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
9964 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9965 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
9966 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
9967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9968 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
9969 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
9970 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9971 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
9972 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
9973 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9974 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
9975 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
9976 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9977 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9978 | | cget(self._c_pointers, n, pointer(values)) |
9979 | | OSError: exception: access violation reading 0x0000000000041468 |
9980 | | |
9981 | | OSError: exception: access violation reading 0x0000000000041468 |
9982 | | |
9983 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9984 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
9985 | | cget(self._c_pointers, n, pointer(values)) |
9986 | | |
9987 | | See log for complete Python traceback. |
9988 | | |
9989 | | Traceback (most recent call last): |
9990 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9991 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
9992 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
9993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9994 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
9995 | | mouse_pause_tracking |
9996 | | self._mouse_pause() |
9997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
9998 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
9999 | | m.pause(self._mouse_pause_position) |
10000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10001 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10002 | | p = self.view.picked_object(x, y) |
10003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10004 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10005 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10006 | | beyond, |
10007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10008 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10009 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10011 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10012 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10014 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10015 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10016 | | exclude=exclude) |
10017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10018 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10019 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10021 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10022 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10024 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10025 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10026 | | exclude=exclude) |
10027 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10028 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10029 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10030 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10031 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10032 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10034 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10035 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10036 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10037 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10038 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10039 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10040 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10041 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10042 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10043 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10044 | | cget(self._c_pointers, n, pointer(values)) |
10045 | | OSError: exception: access violation reading 0x0000000000041468 |
10046 | | |
10047 | | OSError: exception: access violation reading 0x0000000000041468 |
10048 | | |
10049 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10050 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10051 | | cget(self._c_pointers, n, pointer(values)) |
10052 | | |
10053 | | See log for complete Python traceback. |
10054 | | |
10055 | | Traceback (most recent call last): |
10056 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10057 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10058 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10060 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10061 | | mouse_pause_tracking |
10062 | | self._mouse_pause() |
10063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10064 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10065 | | m.pause(self._mouse_pause_position) |
10066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10067 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10068 | | p = self.view.picked_object(x, y) |
10069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10070 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10071 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10072 | | beyond, |
10073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10074 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10075 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10077 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10078 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10080 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10081 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10082 | | exclude=exclude) |
10083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10084 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10085 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10087 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10088 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10090 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10091 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10092 | | exclude=exclude) |
10093 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10094 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10095 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10096 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10097 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10098 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10100 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10101 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10102 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10103 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10104 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10105 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10106 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10107 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10108 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10109 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10110 | | cget(self._c_pointers, n, pointer(values)) |
10111 | | OSError: exception: access violation reading 0x0000000000041468 |
10112 | | |
10113 | | OSError: exception: access violation reading 0x0000000000041468 |
10114 | | |
10115 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10116 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10117 | | cget(self._c_pointers, n, pointer(values)) |
10118 | | |
10119 | | See log for complete Python traceback. |
10120 | | |
10121 | | Traceback (most recent call last): |
10122 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10123 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10124 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10126 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10127 | | mouse_pause_tracking |
10128 | | self._mouse_pause() |
10129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10130 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10131 | | m.pause(self._mouse_pause_position) |
10132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10133 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10134 | | p = self.view.picked_object(x, y) |
10135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10136 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10137 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10138 | | beyond, |
10139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10140 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10141 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10143 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10144 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10146 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10147 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10148 | | exclude=exclude) |
10149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10150 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10151 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10153 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10154 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10156 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10157 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10158 | | exclude=exclude) |
10159 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10160 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10161 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10162 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10163 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10164 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10165 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10166 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10167 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10168 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10169 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10170 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10171 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10172 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10173 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10174 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10175 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10176 | | cget(self._c_pointers, n, pointer(values)) |
10177 | | OSError: exception: access violation reading 0x0000000000041468 |
10178 | | |
10179 | | OSError: exception: access violation reading 0x0000000000041468 |
10180 | | |
10181 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10182 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10183 | | cget(self._c_pointers, n, pointer(values)) |
10184 | | |
10185 | | See log for complete Python traceback. |
10186 | | |
10187 | | Traceback (most recent call last): |
10188 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10189 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10190 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10191 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10192 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10193 | | mouse_pause_tracking |
10194 | | self._mouse_pause() |
10195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10196 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10197 | | m.pause(self._mouse_pause_position) |
10198 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10199 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10200 | | p = self.view.picked_object(x, y) |
10201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10202 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10203 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10204 | | beyond, |
10205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10206 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10207 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10209 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10210 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10212 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10213 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10214 | | exclude=exclude) |
10215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10216 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10217 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10219 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10220 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10222 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10223 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10224 | | exclude=exclude) |
10225 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10226 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10227 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10228 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10229 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10230 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10231 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10232 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10233 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10234 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10235 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10236 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10237 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10238 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10239 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10240 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10241 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10242 | | cget(self._c_pointers, n, pointer(values)) |
10243 | | OSError: exception: access violation reading 0x0000000000041468 |
10244 | | |
10245 | | OSError: exception: access violation reading 0x0000000000041468 |
10246 | | |
10247 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10248 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10249 | | cget(self._c_pointers, n, pointer(values)) |
10250 | | |
10251 | | See log for complete Python traceback. |
10252 | | |
10253 | | Traceback (most recent call last): |
10254 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10255 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10256 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10257 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10258 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10259 | | mouse_pause_tracking |
10260 | | self._mouse_pause() |
10261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10262 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10263 | | m.pause(self._mouse_pause_position) |
10264 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10265 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10266 | | p = self.view.picked_object(x, y) |
10267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10268 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10269 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10270 | | beyond, |
10271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10272 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10273 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10275 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10276 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10278 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10279 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10280 | | exclude=exclude) |
10281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10282 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10283 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10285 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10286 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10288 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10289 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10290 | | exclude=exclude) |
10291 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10292 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10293 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10294 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10295 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10296 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10297 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10298 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10299 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10300 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10301 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10302 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10303 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10304 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10305 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10306 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10307 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10308 | | cget(self._c_pointers, n, pointer(values)) |
10309 | | OSError: exception: access violation reading 0x0000000000041468 |
10310 | | |
10311 | | OSError: exception: access violation reading 0x0000000000041468 |
10312 | | |
10313 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10314 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10315 | | cget(self._c_pointers, n, pointer(values)) |
10316 | | |
10317 | | See log for complete Python traceback. |
10318 | | |
10319 | | Traceback (most recent call last): |
10320 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10321 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10322 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10323 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10324 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10325 | | mouse_pause_tracking |
10326 | | self._mouse_pause() |
10327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10328 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10329 | | m.pause(self._mouse_pause_position) |
10330 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10331 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10332 | | p = self.view.picked_object(x, y) |
10333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10334 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10335 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10336 | | beyond, |
10337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10338 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10339 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10341 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10342 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10344 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10345 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10346 | | exclude=exclude) |
10347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10348 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10349 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10351 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10352 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10354 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10355 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10356 | | exclude=exclude) |
10357 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10358 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10359 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10360 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10361 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10362 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10363 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10364 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10365 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10366 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10367 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10368 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10369 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10370 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10371 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10372 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10373 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10374 | | cget(self._c_pointers, n, pointer(values)) |
10375 | | OSError: exception: access violation reading 0x0000000000041468 |
10376 | | |
10377 | | OSError: exception: access violation reading 0x0000000000041468 |
10378 | | |
10379 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10380 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10381 | | cget(self._c_pointers, n, pointer(values)) |
10382 | | |
10383 | | See log for complete Python traceback. |
10384 | | |
10385 | | Traceback (most recent call last): |
10386 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10387 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10388 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10389 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10390 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10391 | | mouse_pause_tracking |
10392 | | self._mouse_pause() |
10393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10394 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10395 | | m.pause(self._mouse_pause_position) |
10396 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10397 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10398 | | p = self.view.picked_object(x, y) |
10399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10400 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10401 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10402 | | beyond, |
10403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10404 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10405 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10407 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10408 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10410 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10411 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10412 | | exclude=exclude) |
10413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10414 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10415 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10417 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10418 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10420 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10421 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10422 | | exclude=exclude) |
10423 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10424 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10425 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10426 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10427 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10428 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10429 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10430 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10431 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10432 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10433 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10434 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10435 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10436 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10437 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10438 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10439 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10440 | | cget(self._c_pointers, n, pointer(values)) |
10441 | | OSError: exception: access violation reading 0x0000000000041468 |
10442 | | |
10443 | | OSError: exception: access violation reading 0x0000000000041468 |
10444 | | |
10445 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10446 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10447 | | cget(self._c_pointers, n, pointer(values)) |
10448 | | |
10449 | | See log for complete Python traceback. |
10450 | | |
10451 | | Traceback (most recent call last): |
10452 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10453 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10454 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10455 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10456 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10457 | | mouse_pause_tracking |
10458 | | self._mouse_pause() |
10459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10460 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10461 | | m.pause(self._mouse_pause_position) |
10462 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10463 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10464 | | p = self.view.picked_object(x, y) |
10465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10466 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10467 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10468 | | beyond, |
10469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10470 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10471 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10473 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10474 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10476 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10477 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10478 | | exclude=exclude) |
10479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10480 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10481 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10483 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10484 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10486 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10487 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10488 | | exclude=exclude) |
10489 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10490 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10491 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10492 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10493 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10494 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10495 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10496 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10497 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10498 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10499 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10500 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10501 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10502 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10503 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10504 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10505 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10506 | | cget(self._c_pointers, n, pointer(values)) |
10507 | | OSError: exception: access violation reading 0x0000000000041468 |
10508 | | |
10509 | | OSError: exception: access violation reading 0x0000000000041468 |
10510 | | |
10511 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10512 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10513 | | cget(self._c_pointers, n, pointer(values)) |
10514 | | |
10515 | | See log for complete Python traceback. |
10516 | | |
10517 | | Traceback (most recent call last): |
10518 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10519 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10520 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10521 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10522 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10523 | | mouse_pause_tracking |
10524 | | self._mouse_pause() |
10525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10526 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10527 | | m.pause(self._mouse_pause_position) |
10528 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10529 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10530 | | p = self.view.picked_object(x, y) |
10531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10532 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10533 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10534 | | beyond, |
10535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10536 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10537 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10539 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10540 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10542 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10543 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10544 | | exclude=exclude) |
10545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10546 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10547 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10549 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10550 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10552 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10553 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10554 | | exclude=exclude) |
10555 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10556 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10557 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10558 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10559 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10560 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10561 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10562 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10563 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10564 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10565 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10566 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10567 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10568 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10569 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10570 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10571 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10572 | | cget(self._c_pointers, n, pointer(values)) |
10573 | | OSError: exception: access violation reading 0x0000000000041468 |
10574 | | |
10575 | | OSError: exception: access violation reading 0x0000000000041468 |
10576 | | |
10577 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10578 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10579 | | cget(self._c_pointers, n, pointer(values)) |
10580 | | |
10581 | | See log for complete Python traceback. |
10582 | | |
10583 | | Traceback (most recent call last): |
10584 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10585 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10586 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10587 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10588 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10589 | | mouse_pause_tracking |
10590 | | self._mouse_pause() |
10591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10592 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10593 | | m.pause(self._mouse_pause_position) |
10594 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10595 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10596 | | p = self.view.picked_object(x, y) |
10597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10598 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10599 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10600 | | beyond, |
10601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10602 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10603 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10605 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10606 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10608 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10609 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10610 | | exclude=exclude) |
10611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10612 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10613 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10615 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10616 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10618 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10619 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10620 | | exclude=exclude) |
10621 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10622 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10623 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10624 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10625 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10626 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10627 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10628 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10629 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10630 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10631 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10632 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10633 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10634 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10635 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10636 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10637 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10638 | | cget(self._c_pointers, n, pointer(values)) |
10639 | | OSError: exception: access violation reading 0x0000000000041468 |
10640 | | |
10641 | | OSError: exception: access violation reading 0x0000000000041468 |
10642 | | |
10643 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10644 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10645 | | cget(self._c_pointers, n, pointer(values)) |
10646 | | |
10647 | | See log for complete Python traceback. |
10648 | | |
10649 | | Traceback (most recent call last): |
10650 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10651 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10652 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10653 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10654 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10655 | | mouse_pause_tracking |
10656 | | self._mouse_pause() |
10657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10658 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10659 | | m.pause(self._mouse_pause_position) |
10660 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10661 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10662 | | p = self.view.picked_object(x, y) |
10663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10664 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10665 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10666 | | beyond, |
10667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10668 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10669 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10671 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10672 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10674 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10675 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10676 | | exclude=exclude) |
10677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10678 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10679 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10681 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10682 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10684 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10685 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10686 | | exclude=exclude) |
10687 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10688 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10689 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10690 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10691 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10692 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10693 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10694 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10695 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10696 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10697 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10698 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10699 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10700 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10701 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10702 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10703 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10704 | | cget(self._c_pointers, n, pointer(values)) |
10705 | | OSError: exception: access violation reading 0x0000000000041468 |
10706 | | |
10707 | | OSError: exception: access violation reading 0x0000000000041468 |
10708 | | |
10709 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10710 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10711 | | cget(self._c_pointers, n, pointer(values)) |
10712 | | |
10713 | | See log for complete Python traceback. |
10714 | | |
10715 | | Traceback (most recent call last): |
10716 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10717 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10718 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10719 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10720 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10721 | | mouse_pause_tracking |
10722 | | self._mouse_pause() |
10723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10724 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10725 | | m.pause(self._mouse_pause_position) |
10726 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10727 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10728 | | p = self.view.picked_object(x, y) |
10729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10730 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10731 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10732 | | beyond, |
10733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10734 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10735 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10737 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10738 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10740 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10741 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10742 | | exclude=exclude) |
10743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10744 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10745 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10747 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10748 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10750 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10751 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10752 | | exclude=exclude) |
10753 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10754 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10755 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10756 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10757 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10758 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10759 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10760 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10761 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10762 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10763 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10764 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10765 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10766 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10767 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10768 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10769 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10770 | | cget(self._c_pointers, n, pointer(values)) |
10771 | | OSError: exception: access violation reading 0x0000000000041468 |
10772 | | |
10773 | | OSError: exception: access violation reading 0x0000000000041468 |
10774 | | |
10775 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10776 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10777 | | cget(self._c_pointers, n, pointer(values)) |
10778 | | |
10779 | | See log for complete Python traceback. |
10780 | | |
10781 | | Traceback (most recent call last): |
10782 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10783 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10784 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10785 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10786 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10787 | | mouse_pause_tracking |
10788 | | self._mouse_pause() |
10789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10790 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10791 | | m.pause(self._mouse_pause_position) |
10792 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10793 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10794 | | p = self.view.picked_object(x, y) |
10795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10796 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10797 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10798 | | beyond, |
10799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10800 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10801 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10803 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10804 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10806 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10807 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10808 | | exclude=exclude) |
10809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10810 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10811 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10813 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10814 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10816 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10817 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10818 | | exclude=exclude) |
10819 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10820 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10821 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10822 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10823 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10824 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10825 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10826 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10827 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10828 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10829 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10830 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10831 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10832 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10833 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10834 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10835 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10836 | | cget(self._c_pointers, n, pointer(values)) |
10837 | | OSError: exception: access violation reading 0x0000000000041468 |
10838 | | |
10839 | | OSError: exception: access violation reading 0x0000000000041468 |
10840 | | |
10841 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10842 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10843 | | cget(self._c_pointers, n, pointer(values)) |
10844 | | |
10845 | | See log for complete Python traceback. |
10846 | | |
10847 | | Traceback (most recent call last): |
10848 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10849 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10850 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10851 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10852 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10853 | | mouse_pause_tracking |
10854 | | self._mouse_pause() |
10855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10856 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10857 | | m.pause(self._mouse_pause_position) |
10858 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10859 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10860 | | p = self.view.picked_object(x, y) |
10861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10862 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10863 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10864 | | beyond, |
10865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10866 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10867 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10869 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10870 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10872 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10873 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10874 | | exclude=exclude) |
10875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10876 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10877 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10879 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10880 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10882 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10883 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10884 | | exclude=exclude) |
10885 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10886 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10887 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10888 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10889 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10890 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10891 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10892 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10893 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10894 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10895 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10896 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10897 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10898 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10899 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10900 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10901 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10902 | | cget(self._c_pointers, n, pointer(values)) |
10903 | | OSError: exception: access violation reading 0x0000000000041468 |
10904 | | |
10905 | | OSError: exception: access violation reading 0x0000000000041468 |
10906 | | |
10907 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10908 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10909 | | cget(self._c_pointers, n, pointer(values)) |
10910 | | |
10911 | | See log for complete Python traceback. |
10912 | | |
10913 | | Traceback (most recent call last): |
10914 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10915 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10916 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10917 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10918 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10919 | | mouse_pause_tracking |
10920 | | self._mouse_pause() |
10921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10922 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10923 | | m.pause(self._mouse_pause_position) |
10924 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10925 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10926 | | p = self.view.picked_object(x, y) |
10927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10928 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10929 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10930 | | beyond, |
10931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10932 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10933 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
10934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10935 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10936 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10938 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10939 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10940 | | exclude=exclude) |
10941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10942 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10943 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10945 | | packages\chimerax\core\models.py", line 126, in first_intercept |
10946 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
10947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10948 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
10949 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
10950 | | exclude=exclude) |
10951 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10952 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
10953 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
10954 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10955 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
10956 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
10957 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10958 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
10959 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
10960 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10961 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
10962 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
10963 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10964 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
10965 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
10966 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10967 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10968 | | cget(self._c_pointers, n, pointer(values)) |
10969 | | OSError: exception: access violation reading 0x0000000000041468 |
10970 | | |
10971 | | OSError: exception: access violation reading 0x0000000000041468 |
10972 | | |
10973 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10974 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
10975 | | cget(self._c_pointers, n, pointer(values)) |
10976 | | |
10977 | | See log for complete Python traceback. |
10978 | | |
10979 | | Traceback (most recent call last): |
10980 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10981 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
10982 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
10983 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10984 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
10985 | | mouse_pause_tracking |
10986 | | self._mouse_pause() |
10987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10988 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
10989 | | m.pause(self._mouse_pause_position) |
10990 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10991 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
10992 | | p = self.view.picked_object(x, y) |
10993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10994 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
10995 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
10996 | | beyond, |
10997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
10998 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
10999 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11001 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11002 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11004 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11005 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11006 | | exclude=exclude) |
11007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11008 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11009 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11011 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11012 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11014 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11015 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11016 | | exclude=exclude) |
11017 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11018 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11019 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11020 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11021 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11022 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11023 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11024 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11025 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11026 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11027 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11028 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11029 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11030 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11031 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11032 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11033 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11034 | | cget(self._c_pointers, n, pointer(values)) |
11035 | | OSError: exception: access violation reading 0x0000000000041468 |
11036 | | |
11037 | | OSError: exception: access violation reading 0x0000000000041468 |
11038 | | |
11039 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11040 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11041 | | cget(self._c_pointers, n, pointer(values)) |
11042 | | |
11043 | | See log for complete Python traceback. |
11044 | | |
11045 | | Traceback (most recent call last): |
11046 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11047 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11048 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11049 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11050 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11051 | | mouse_pause_tracking |
11052 | | self._mouse_pause() |
11053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11054 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11055 | | m.pause(self._mouse_pause_position) |
11056 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11057 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11058 | | p = self.view.picked_object(x, y) |
11059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11060 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11061 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11062 | | beyond, |
11063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11064 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11065 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11067 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11068 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11070 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11071 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11072 | | exclude=exclude) |
11073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11074 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11075 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11077 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11078 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11080 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11081 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11082 | | exclude=exclude) |
11083 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11084 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11085 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11086 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11087 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11088 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11089 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11090 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11091 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11092 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11093 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11094 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11095 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11096 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11097 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11098 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11099 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11100 | | cget(self._c_pointers, n, pointer(values)) |
11101 | | OSError: exception: access violation reading 0x0000000000041468 |
11102 | | |
11103 | | OSError: exception: access violation reading 0x0000000000041468 |
11104 | | |
11105 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11106 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11107 | | cget(self._c_pointers, n, pointer(values)) |
11108 | | |
11109 | | See log for complete Python traceback. |
11110 | | |
11111 | | Traceback (most recent call last): |
11112 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11113 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11114 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11115 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11116 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11117 | | mouse_pause_tracking |
11118 | | self._mouse_pause() |
11119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11120 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11121 | | m.pause(self._mouse_pause_position) |
11122 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11123 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11124 | | p = self.view.picked_object(x, y) |
11125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11126 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11127 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11128 | | beyond, |
11129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11130 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11131 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11133 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11134 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11136 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11137 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11138 | | exclude=exclude) |
11139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11140 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11141 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11143 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11144 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11146 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11147 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11148 | | exclude=exclude) |
11149 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11150 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11151 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11152 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11153 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11154 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11155 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11156 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11157 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11158 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11159 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11160 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11161 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11162 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11163 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11164 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11165 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11166 | | cget(self._c_pointers, n, pointer(values)) |
11167 | | OSError: exception: access violation reading 0x0000000000041468 |
11168 | | |
11169 | | OSError: exception: access violation reading 0x0000000000041468 |
11170 | | |
11171 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11172 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11173 | | cget(self._c_pointers, n, pointer(values)) |
11174 | | |
11175 | | See log for complete Python traceback. |
11176 | | |
11177 | | Traceback (most recent call last): |
11178 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11179 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11180 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11181 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11182 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11183 | | mouse_pause_tracking |
11184 | | self._mouse_pause() |
11185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11186 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11187 | | m.pause(self._mouse_pause_position) |
11188 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11189 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11190 | | p = self.view.picked_object(x, y) |
11191 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11192 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11193 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11194 | | beyond, |
11195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11196 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11197 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11198 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11199 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11200 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11202 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11203 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11204 | | exclude=exclude) |
11205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11206 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11207 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11209 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11210 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11212 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11213 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11214 | | exclude=exclude) |
11215 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11216 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11217 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11218 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11219 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11220 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11221 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11222 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11223 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11224 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11225 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11226 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11227 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11228 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11229 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11230 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11231 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11232 | | cget(self._c_pointers, n, pointer(values)) |
11233 | | OSError: exception: access violation reading 0x0000000000041468 |
11234 | | |
11235 | | OSError: exception: access violation reading 0x0000000000041468 |
11236 | | |
11237 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11238 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11239 | | cget(self._c_pointers, n, pointer(values)) |
11240 | | |
11241 | | See log for complete Python traceback. |
11242 | | |
11243 | | Traceback (most recent call last): |
11244 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11245 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11246 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11247 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11248 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11249 | | mouse_pause_tracking |
11250 | | self._mouse_pause() |
11251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11252 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11253 | | m.pause(self._mouse_pause_position) |
11254 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11255 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11256 | | p = self.view.picked_object(x, y) |
11257 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11258 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11259 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11260 | | beyond, |
11261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11262 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11263 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11264 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11265 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11266 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11268 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11269 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11270 | | exclude=exclude) |
11271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11272 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11273 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11275 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11276 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11278 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11279 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11280 | | exclude=exclude) |
11281 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11282 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11283 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11284 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11285 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11286 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11287 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11288 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11289 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11290 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11291 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11292 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11293 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11294 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11295 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11296 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11297 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11298 | | cget(self._c_pointers, n, pointer(values)) |
11299 | | OSError: exception: access violation reading 0x0000000000041468 |
11300 | | |
11301 | | OSError: exception: access violation reading 0x0000000000041468 |
11302 | | |
11303 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11304 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11305 | | cget(self._c_pointers, n, pointer(values)) |
11306 | | |
11307 | | See log for complete Python traceback. |
11308 | | |
11309 | | Traceback (most recent call last): |
11310 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11311 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11312 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11313 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11314 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11315 | | mouse_pause_tracking |
11316 | | self._mouse_pause() |
11317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11318 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11319 | | m.pause(self._mouse_pause_position) |
11320 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11321 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11322 | | p = self.view.picked_object(x, y) |
11323 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11324 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11325 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11326 | | beyond, |
11327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11328 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11329 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11330 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11331 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11332 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11334 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11335 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11336 | | exclude=exclude) |
11337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11338 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11339 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11341 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11342 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11344 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11345 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11346 | | exclude=exclude) |
11347 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11348 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11349 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11350 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11351 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11352 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11353 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11354 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11355 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11356 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11357 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11358 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11359 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11360 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11361 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11362 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11363 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11364 | | cget(self._c_pointers, n, pointer(values)) |
11365 | | OSError: exception: access violation reading 0x0000000000041468 |
11366 | | |
11367 | | OSError: exception: access violation reading 0x0000000000041468 |
11368 | | |
11369 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11370 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11371 | | cget(self._c_pointers, n, pointer(values)) |
11372 | | |
11373 | | See log for complete Python traceback. |
11374 | | |
11375 | | Traceback (most recent call last): |
11376 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11377 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11378 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11379 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11380 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11381 | | mouse_pause_tracking |
11382 | | self._mouse_pause() |
11383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11384 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11385 | | m.pause(self._mouse_pause_position) |
11386 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11387 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11388 | | p = self.view.picked_object(x, y) |
11389 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11390 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11391 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11392 | | beyond, |
11393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11394 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11395 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11396 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11397 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11398 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11400 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11401 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11402 | | exclude=exclude) |
11403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11404 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11405 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11407 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11408 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11410 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11411 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11412 | | exclude=exclude) |
11413 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11414 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11415 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11416 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11417 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11418 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11419 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11420 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11421 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11422 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11423 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11424 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11425 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11426 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11427 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11428 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11429 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11430 | | cget(self._c_pointers, n, pointer(values)) |
11431 | | OSError: exception: access violation reading 0x0000000000041468 |
11432 | | |
11433 | | OSError: exception: access violation reading 0x0000000000041468 |
11434 | | |
11435 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11436 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11437 | | cget(self._c_pointers, n, pointer(values)) |
11438 | | |
11439 | | See log for complete Python traceback. |
11440 | | |
11441 | | Traceback (most recent call last): |
11442 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11443 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11444 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11445 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11446 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11447 | | mouse_pause_tracking |
11448 | | self._mouse_pause() |
11449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11450 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11451 | | m.pause(self._mouse_pause_position) |
11452 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11453 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11454 | | p = self.view.picked_object(x, y) |
11455 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11456 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11457 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11458 | | beyond, |
11459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11460 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11461 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11462 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11463 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11464 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11466 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11467 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11468 | | exclude=exclude) |
11469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11470 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11471 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11473 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11474 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11476 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11477 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11478 | | exclude=exclude) |
11479 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11480 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11481 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11482 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11483 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11484 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11485 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11486 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11487 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11488 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11489 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11490 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11491 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11492 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11493 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11494 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11495 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11496 | | cget(self._c_pointers, n, pointer(values)) |
11497 | | OSError: exception: access violation reading 0x0000000000041468 |
11498 | | |
11499 | | OSError: exception: access violation reading 0x0000000000041468 |
11500 | | |
11501 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11502 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11503 | | cget(self._c_pointers, n, pointer(values)) |
11504 | | |
11505 | | See log for complete Python traceback. |
11506 | | |
11507 | | Traceback (most recent call last): |
11508 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11509 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11510 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11511 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11512 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11513 | | mouse_pause_tracking |
11514 | | self._mouse_pause() |
11515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11516 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11517 | | m.pause(self._mouse_pause_position) |
11518 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11519 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11520 | | p = self.view.picked_object(x, y) |
11521 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11522 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11523 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11524 | | beyond, |
11525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11526 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11527 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11528 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11529 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11530 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11532 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11533 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11534 | | exclude=exclude) |
11535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11536 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11537 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11539 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11540 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11542 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11543 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11544 | | exclude=exclude) |
11545 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11546 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11547 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11548 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11549 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11550 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11551 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11552 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11553 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11554 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11555 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11556 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11557 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11558 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11559 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11560 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11561 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11562 | | cget(self._c_pointers, n, pointer(values)) |
11563 | | OSError: exception: access violation reading 0x0000000000041468 |
11564 | | |
11565 | | OSError: exception: access violation reading 0x0000000000041468 |
11566 | | |
11567 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11568 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11569 | | cget(self._c_pointers, n, pointer(values)) |
11570 | | |
11571 | | See log for complete Python traceback. |
11572 | | |
11573 | | Traceback (most recent call last): |
11574 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11575 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11576 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11577 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11578 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11579 | | mouse_pause_tracking |
11580 | | self._mouse_pause() |
11581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11582 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11583 | | m.pause(self._mouse_pause_position) |
11584 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11585 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11586 | | p = self.view.picked_object(x, y) |
11587 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11588 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11589 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11590 | | beyond, |
11591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11592 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11593 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11594 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11595 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11596 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11598 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11599 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11600 | | exclude=exclude) |
11601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11602 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11603 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11605 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11606 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11608 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11609 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11610 | | exclude=exclude) |
11611 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11612 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11613 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11614 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11615 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11616 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11617 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11618 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11619 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11620 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11621 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11622 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11623 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11624 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11625 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11626 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11627 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11628 | | cget(self._c_pointers, n, pointer(values)) |
11629 | | OSError: exception: access violation reading 0x0000000000041468 |
11630 | | |
11631 | | OSError: exception: access violation reading 0x0000000000041468 |
11632 | | |
11633 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11634 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11635 | | cget(self._c_pointers, n, pointer(values)) |
11636 | | |
11637 | | See log for complete Python traceback. |
11638 | | |
11639 | | Traceback (most recent call last): |
11640 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11641 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11642 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11643 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11644 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11645 | | mouse_pause_tracking |
11646 | | self._mouse_pause() |
11647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11648 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11649 | | m.pause(self._mouse_pause_position) |
11650 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11651 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11652 | | p = self.view.picked_object(x, y) |
11653 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11654 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11655 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11656 | | beyond, |
11657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11658 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11659 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11660 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11661 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11662 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11664 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11665 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11666 | | exclude=exclude) |
11667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11668 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11669 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11671 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11672 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11674 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11675 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11676 | | exclude=exclude) |
11677 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11678 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11679 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11680 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11681 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11682 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11683 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11684 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11685 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11686 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11687 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11688 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11689 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11690 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11691 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11692 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11693 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11694 | | cget(self._c_pointers, n, pointer(values)) |
11695 | | OSError: exception: access violation reading 0x0000000000041468 |
11696 | | |
11697 | | OSError: exception: access violation reading 0x0000000000041468 |
11698 | | |
11699 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11700 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11701 | | cget(self._c_pointers, n, pointer(values)) |
11702 | | |
11703 | | See log for complete Python traceback. |
11704 | | |
11705 | | Traceback (most recent call last): |
11706 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11707 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11708 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11709 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11710 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11711 | | mouse_pause_tracking |
11712 | | self._mouse_pause() |
11713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11714 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11715 | | m.pause(self._mouse_pause_position) |
11716 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11717 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11718 | | p = self.view.picked_object(x, y) |
11719 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11720 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11721 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11722 | | beyond, |
11723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11724 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11725 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11726 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11727 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11728 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11730 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11731 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11732 | | exclude=exclude) |
11733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11734 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11735 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11737 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11738 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11740 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11741 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11742 | | exclude=exclude) |
11743 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11744 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11745 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11746 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11747 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11748 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11749 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11750 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11751 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11752 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11753 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11754 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11755 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11756 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11757 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11758 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11759 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11760 | | cget(self._c_pointers, n, pointer(values)) |
11761 | | OSError: exception: access violation reading 0x0000000000041468 |
11762 | | |
11763 | | OSError: exception: access violation reading 0x0000000000041468 |
11764 | | |
11765 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11766 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11767 | | cget(self._c_pointers, n, pointer(values)) |
11768 | | |
11769 | | See log for complete Python traceback. |
11770 | | |
11771 | | Traceback (most recent call last): |
11772 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11773 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11774 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11775 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11776 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11777 | | mouse_pause_tracking |
11778 | | self._mouse_pause() |
11779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11780 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11781 | | m.pause(self._mouse_pause_position) |
11782 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11783 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11784 | | p = self.view.picked_object(x, y) |
11785 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11786 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11787 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11788 | | beyond, |
11789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11790 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11791 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11792 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11793 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11794 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11796 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11797 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11798 | | exclude=exclude) |
11799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11800 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11801 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11803 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11804 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11806 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11807 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11808 | | exclude=exclude) |
11809 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11810 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11811 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11812 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11813 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11814 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11815 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11816 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11817 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11818 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11819 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11820 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11821 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11822 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11823 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11824 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11825 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11826 | | cget(self._c_pointers, n, pointer(values)) |
11827 | | OSError: exception: access violation reading 0x0000000000041468 |
11828 | | |
11829 | | OSError: exception: access violation reading 0x0000000000041468 |
11830 | | |
11831 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11832 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11833 | | cget(self._c_pointers, n, pointer(values)) |
11834 | | |
11835 | | See log for complete Python traceback. |
11836 | | |
11837 | | Traceback (most recent call last): |
11838 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11839 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11840 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11841 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11842 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11843 | | mouse_pause_tracking |
11844 | | self._mouse_pause() |
11845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11846 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11847 | | m.pause(self._mouse_pause_position) |
11848 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11849 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11850 | | p = self.view.picked_object(x, y) |
11851 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11852 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11853 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11854 | | beyond, |
11855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11856 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11857 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11858 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11859 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11860 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11862 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11863 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11864 | | exclude=exclude) |
11865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11866 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11867 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11869 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11870 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11872 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11873 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11874 | | exclude=exclude) |
11875 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11876 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11877 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11878 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11879 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11880 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11881 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11882 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11883 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11884 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11885 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11886 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11887 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11888 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11889 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11890 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11891 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11892 | | cget(self._c_pointers, n, pointer(values)) |
11893 | | OSError: exception: access violation reading 0x0000000000041468 |
11894 | | |
11895 | | OSError: exception: access violation reading 0x0000000000041468 |
11896 | | |
11897 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11898 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11899 | | cget(self._c_pointers, n, pointer(values)) |
11900 | | |
11901 | | See log for complete Python traceback. |
11902 | | |
11903 | | Traceback (most recent call last): |
11904 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11905 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11906 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11907 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11908 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11909 | | mouse_pause_tracking |
11910 | | self._mouse_pause() |
11911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11912 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11913 | | m.pause(self._mouse_pause_position) |
11914 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11915 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11916 | | p = self.view.picked_object(x, y) |
11917 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11918 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11919 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11920 | | beyond, |
11921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11922 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11923 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11924 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11925 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11926 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11928 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11929 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11930 | | exclude=exclude) |
11931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11932 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11933 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11935 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11936 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11938 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11939 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11940 | | exclude=exclude) |
11941 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11942 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11943 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
11944 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11945 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
11946 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
11947 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11948 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
11949 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
11950 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11951 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
11952 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
11953 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11954 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
11955 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
11956 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11957 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11958 | | cget(self._c_pointers, n, pointer(values)) |
11959 | | OSError: exception: access violation reading 0x0000000000041468 |
11960 | | |
11961 | | OSError: exception: access violation reading 0x0000000000041468 |
11962 | | |
11963 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11964 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
11965 | | cget(self._c_pointers, n, pointer(values)) |
11966 | | |
11967 | | See log for complete Python traceback. |
11968 | | |
11969 | | Traceback (most recent call last): |
11970 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11971 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
11972 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
11973 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11974 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
11975 | | mouse_pause_tracking |
11976 | | self._mouse_pause() |
11977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11978 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
11979 | | m.pause(self._mouse_pause_position) |
11980 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11981 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
11982 | | p = self.view.picked_object(x, y) |
11983 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11984 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
11985 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
11986 | | beyond, |
11987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11988 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
11989 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
11990 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11991 | | packages\chimerax\core\models.py", line 126, in first_intercept |
11992 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
11993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11994 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
11995 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
11996 | | exclude=exclude) |
11997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
11998 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
11999 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12001 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12002 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12004 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12005 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12006 | | exclude=exclude) |
12007 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12008 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12009 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12010 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12011 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12012 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12013 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12014 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12015 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12016 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12017 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12018 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12019 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12020 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12021 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12022 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12023 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12024 | | cget(self._c_pointers, n, pointer(values)) |
12025 | | OSError: exception: access violation reading 0x0000000000041468 |
12026 | | |
12027 | | OSError: exception: access violation reading 0x0000000000041468 |
12028 | | |
12029 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12030 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12031 | | cget(self._c_pointers, n, pointer(values)) |
12032 | | |
12033 | | See log for complete Python traceback. |
12034 | | |
12035 | | Traceback (most recent call last): |
12036 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12037 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12038 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12039 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12040 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12041 | | mouse_pause_tracking |
12042 | | self._mouse_pause() |
12043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12044 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12045 | | m.pause(self._mouse_pause_position) |
12046 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12047 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12048 | | p = self.view.picked_object(x, y) |
12049 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12050 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12051 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12052 | | beyond, |
12053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12054 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12055 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12056 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12057 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12058 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12060 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12061 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12062 | | exclude=exclude) |
12063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12064 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12065 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12067 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12068 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12070 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12071 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12072 | | exclude=exclude) |
12073 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12074 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12075 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12076 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12077 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12078 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12079 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12080 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12081 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12082 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12083 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12084 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12085 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12086 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12087 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12088 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12089 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12090 | | cget(self._c_pointers, n, pointer(values)) |
12091 | | OSError: exception: access violation reading 0x0000000000041468 |
12092 | | |
12093 | | OSError: exception: access violation reading 0x0000000000041468 |
12094 | | |
12095 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12096 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12097 | | cget(self._c_pointers, n, pointer(values)) |
12098 | | |
12099 | | See log for complete Python traceback. |
12100 | | |
12101 | | Traceback (most recent call last): |
12102 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12103 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12104 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12105 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12106 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12107 | | mouse_pause_tracking |
12108 | | self._mouse_pause() |
12109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12110 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12111 | | m.pause(self._mouse_pause_position) |
12112 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12113 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12114 | | p = self.view.picked_object(x, y) |
12115 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12116 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12117 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12118 | | beyond, |
12119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12120 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12121 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12122 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12123 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12124 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12126 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12127 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12128 | | exclude=exclude) |
12129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12130 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12131 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12133 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12134 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12136 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12137 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12138 | | exclude=exclude) |
12139 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12140 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12141 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12142 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12143 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12144 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12145 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12146 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12147 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12148 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12149 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12150 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12151 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12152 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12153 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12154 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12155 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12156 | | cget(self._c_pointers, n, pointer(values)) |
12157 | | OSError: exception: access violation reading 0x0000000000041468 |
12158 | | |
12159 | | OSError: exception: access violation reading 0x0000000000041468 |
12160 | | |
12161 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12162 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12163 | | cget(self._c_pointers, n, pointer(values)) |
12164 | | |
12165 | | See log for complete Python traceback. |
12166 | | |
12167 | | Traceback (most recent call last): |
12168 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12169 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12170 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12171 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12172 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12173 | | mouse_pause_tracking |
12174 | | self._mouse_pause() |
12175 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12176 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12177 | | m.pause(self._mouse_pause_position) |
12178 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12179 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12180 | | p = self.view.picked_object(x, y) |
12181 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12182 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12183 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12184 | | beyond, |
12185 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12186 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12187 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12188 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12189 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12190 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12191 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12192 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12193 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12194 | | exclude=exclude) |
12195 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12196 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12197 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12198 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12199 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12200 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12201 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12202 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12203 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12204 | | exclude=exclude) |
12205 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12206 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12207 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12208 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12209 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12210 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12211 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12212 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12213 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12214 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12215 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12216 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12217 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12218 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12219 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12220 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12221 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12222 | | cget(self._c_pointers, n, pointer(values)) |
12223 | | OSError: exception: access violation reading 0x0000000000041468 |
12224 | | |
12225 | | OSError: exception: access violation reading 0x0000000000041468 |
12226 | | |
12227 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12228 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12229 | | cget(self._c_pointers, n, pointer(values)) |
12230 | | |
12231 | | See log for complete Python traceback. |
12232 | | |
12233 | | Traceback (most recent call last): |
12234 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12235 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12236 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12237 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12238 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12239 | | mouse_pause_tracking |
12240 | | self._mouse_pause() |
12241 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12242 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12243 | | m.pause(self._mouse_pause_position) |
12244 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12245 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12246 | | p = self.view.picked_object(x, y) |
12247 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12248 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12249 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12250 | | beyond, |
12251 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12252 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12253 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12254 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12255 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12256 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12257 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12258 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12259 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12260 | | exclude=exclude) |
12261 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12262 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12263 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12264 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12265 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12266 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12267 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12268 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12269 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12270 | | exclude=exclude) |
12271 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12272 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12273 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12274 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12275 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12276 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12277 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12278 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12279 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12280 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12281 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12282 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12283 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12284 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12285 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12286 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12287 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12288 | | cget(self._c_pointers, n, pointer(values)) |
12289 | | OSError: exception: access violation reading 0x0000000000041468 |
12290 | | |
12291 | | OSError: exception: access violation reading 0x0000000000041468 |
12292 | | |
12293 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12294 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12295 | | cget(self._c_pointers, n, pointer(values)) |
12296 | | |
12297 | | See log for complete Python traceback. |
12298 | | |
12299 | | Traceback (most recent call last): |
12300 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12301 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12302 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12303 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12304 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12305 | | mouse_pause_tracking |
12306 | | self._mouse_pause() |
12307 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12308 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12309 | | m.pause(self._mouse_pause_position) |
12310 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12311 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12312 | | p = self.view.picked_object(x, y) |
12313 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12314 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12315 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12316 | | beyond, |
12317 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12318 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12319 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12320 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12321 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12322 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12323 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12324 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12325 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12326 | | exclude=exclude) |
12327 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12328 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12329 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12330 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12331 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12332 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12333 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12334 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12335 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12336 | | exclude=exclude) |
12337 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12338 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12339 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12340 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12341 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12342 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12343 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12344 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12345 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12346 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12347 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12348 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12349 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12350 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12351 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12352 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12353 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12354 | | cget(self._c_pointers, n, pointer(values)) |
12355 | | OSError: exception: access violation reading 0x0000000000041468 |
12356 | | |
12357 | | OSError: exception: access violation reading 0x0000000000041468 |
12358 | | |
12359 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12360 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12361 | | cget(self._c_pointers, n, pointer(values)) |
12362 | | |
12363 | | See log for complete Python traceback. |
12364 | | |
12365 | | Traceback (most recent call last): |
12366 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12367 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12368 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12369 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12370 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12371 | | mouse_pause_tracking |
12372 | | self._mouse_pause() |
12373 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12374 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12375 | | m.pause(self._mouse_pause_position) |
12376 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12377 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12378 | | p = self.view.picked_object(x, y) |
12379 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12380 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12381 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12382 | | beyond, |
12383 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12384 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12385 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12386 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12387 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12388 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12389 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12390 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12391 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12392 | | exclude=exclude) |
12393 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12394 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12395 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12396 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12397 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12398 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12399 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12400 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12401 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12402 | | exclude=exclude) |
12403 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12404 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12405 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12406 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12407 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12408 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12409 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12410 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12411 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12412 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12413 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12414 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12415 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12416 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12417 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12418 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12419 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12420 | | cget(self._c_pointers, n, pointer(values)) |
12421 | | OSError: exception: access violation reading 0x0000000000041468 |
12422 | | |
12423 | | OSError: exception: access violation reading 0x0000000000041468 |
12424 | | |
12425 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12426 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12427 | | cget(self._c_pointers, n, pointer(values)) |
12428 | | |
12429 | | See log for complete Python traceback. |
12430 | | |
12431 | | Traceback (most recent call last): |
12432 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12433 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12434 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12435 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12436 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12437 | | mouse_pause_tracking |
12438 | | self._mouse_pause() |
12439 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12440 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12441 | | m.pause(self._mouse_pause_position) |
12442 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12443 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12444 | | p = self.view.picked_object(x, y) |
12445 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12446 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12447 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12448 | | beyond, |
12449 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12450 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12451 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12452 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12453 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12454 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12455 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12456 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12457 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12458 | | exclude=exclude) |
12459 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12460 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12461 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12462 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12463 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12464 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12465 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12466 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12467 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12468 | | exclude=exclude) |
12469 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12470 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12471 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12472 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12473 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12474 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12475 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12476 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12477 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12478 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12479 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12480 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12481 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12482 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12483 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12484 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12485 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12486 | | cget(self._c_pointers, n, pointer(values)) |
12487 | | OSError: exception: access violation reading 0x0000000000041468 |
12488 | | |
12489 | | OSError: exception: access violation reading 0x0000000000041468 |
12490 | | |
12491 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12492 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12493 | | cget(self._c_pointers, n, pointer(values)) |
12494 | | |
12495 | | See log for complete Python traceback. |
12496 | | |
12497 | | Traceback (most recent call last): |
12498 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12499 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12500 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12501 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12502 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12503 | | mouse_pause_tracking |
12504 | | self._mouse_pause() |
12505 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12506 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12507 | | m.pause(self._mouse_pause_position) |
12508 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12509 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12510 | | p = self.view.picked_object(x, y) |
12511 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12512 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12513 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12514 | | beyond, |
12515 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12516 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12517 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12518 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12519 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12520 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12521 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12522 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12523 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12524 | | exclude=exclude) |
12525 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12526 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12527 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12528 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12529 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12530 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12531 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12532 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12533 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12534 | | exclude=exclude) |
12535 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12536 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12537 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12538 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12539 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12540 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12541 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12542 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12543 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12544 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12545 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12546 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12547 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12548 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12549 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12550 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12551 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12552 | | cget(self._c_pointers, n, pointer(values)) |
12553 | | OSError: exception: access violation reading 0x0000000000041468 |
12554 | | |
12555 | | OSError: exception: access violation reading 0x0000000000041468 |
12556 | | |
12557 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12558 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12559 | | cget(self._c_pointers, n, pointer(values)) |
12560 | | |
12561 | | See log for complete Python traceback. |
12562 | | |
12563 | | Traceback (most recent call last): |
12564 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12565 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12566 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12567 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12568 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12569 | | mouse_pause_tracking |
12570 | | self._mouse_pause() |
12571 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12572 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12573 | | m.pause(self._mouse_pause_position) |
12574 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12575 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12576 | | p = self.view.picked_object(x, y) |
12577 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12578 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12579 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12580 | | beyond, |
12581 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12582 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12583 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12584 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12585 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12586 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12587 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12588 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12589 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12590 | | exclude=exclude) |
12591 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12592 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12593 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12594 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12595 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12596 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12597 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12598 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12599 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12600 | | exclude=exclude) |
12601 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12602 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12603 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12604 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12605 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12606 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12607 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12608 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12609 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12610 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12611 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12612 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12613 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12614 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12615 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12616 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12617 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12618 | | cget(self._c_pointers, n, pointer(values)) |
12619 | | OSError: exception: access violation reading 0x0000000000041468 |
12620 | | |
12621 | | OSError: exception: access violation reading 0x0000000000041468 |
12622 | | |
12623 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12624 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12625 | | cget(self._c_pointers, n, pointer(values)) |
12626 | | |
12627 | | See log for complete Python traceback. |
12628 | | |
12629 | | Traceback (most recent call last): |
12630 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12631 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12632 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12633 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12634 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12635 | | mouse_pause_tracking |
12636 | | self._mouse_pause() |
12637 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12638 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12639 | | m.pause(self._mouse_pause_position) |
12640 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12641 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12642 | | p = self.view.picked_object(x, y) |
12643 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12644 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12645 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12646 | | beyond, |
12647 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12648 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12649 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12650 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12651 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12652 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12653 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12654 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12655 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12656 | | exclude=exclude) |
12657 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12658 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12659 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12660 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12661 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12662 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12663 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12664 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12665 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12666 | | exclude=exclude) |
12667 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12668 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12669 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12670 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12671 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12672 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12673 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12674 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12675 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12676 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12677 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12678 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12679 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12680 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12681 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12682 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12683 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12684 | | cget(self._c_pointers, n, pointer(values)) |
12685 | | OSError: exception: access violation reading 0x0000000000041468 |
12686 | | |
12687 | | OSError: exception: access violation reading 0x0000000000041468 |
12688 | | |
12689 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12690 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12691 | | cget(self._c_pointers, n, pointer(values)) |
12692 | | |
12693 | | See log for complete Python traceback. |
12694 | | |
12695 | | Traceback (most recent call last): |
12696 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12697 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12698 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12699 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12700 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12701 | | mouse_pause_tracking |
12702 | | self._mouse_pause() |
12703 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12704 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12705 | | m.pause(self._mouse_pause_position) |
12706 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12707 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12708 | | p = self.view.picked_object(x, y) |
12709 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12710 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12711 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12712 | | beyond, |
12713 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12714 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12715 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12716 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12717 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12718 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12719 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12720 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12721 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12722 | | exclude=exclude) |
12723 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12724 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12725 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12726 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12727 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12728 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12729 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12730 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12731 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12732 | | exclude=exclude) |
12733 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12734 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12735 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12736 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12737 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12738 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12739 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12740 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12741 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12742 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12743 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12744 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12745 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12746 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12747 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12748 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12749 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12750 | | cget(self._c_pointers, n, pointer(values)) |
12751 | | OSError: exception: access violation reading 0x0000000000041468 |
12752 | | |
12753 | | OSError: exception: access violation reading 0x0000000000041468 |
12754 | | |
12755 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12756 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12757 | | cget(self._c_pointers, n, pointer(values)) |
12758 | | |
12759 | | See log for complete Python traceback. |
12760 | | |
12761 | | Traceback (most recent call last): |
12762 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12763 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12764 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12765 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12766 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12767 | | mouse_pause_tracking |
12768 | | self._mouse_pause() |
12769 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12770 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12771 | | m.pause(self._mouse_pause_position) |
12772 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12773 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12774 | | p = self.view.picked_object(x, y) |
12775 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12776 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12777 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12778 | | beyond, |
12779 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12780 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12781 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12782 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12783 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12784 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12785 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12786 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12787 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12788 | | exclude=exclude) |
12789 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12790 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12791 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12792 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12793 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12794 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12795 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12796 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12797 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12798 | | exclude=exclude) |
12799 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12800 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12801 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12802 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12803 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12804 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12805 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12806 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12807 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12808 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12809 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12810 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12811 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12812 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12813 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12814 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12815 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12816 | | cget(self._c_pointers, n, pointer(values)) |
12817 | | OSError: exception: access violation reading 0x0000000000041468 |
12818 | | |
12819 | | OSError: exception: access violation reading 0x0000000000041468 |
12820 | | |
12821 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12822 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12823 | | cget(self._c_pointers, n, pointer(values)) |
12824 | | |
12825 | | See log for complete Python traceback. |
12826 | | |
12827 | | Traceback (most recent call last): |
12828 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12829 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12830 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12831 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12832 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12833 | | mouse_pause_tracking |
12834 | | self._mouse_pause() |
12835 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12836 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12837 | | m.pause(self._mouse_pause_position) |
12838 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12839 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12840 | | p = self.view.picked_object(x, y) |
12841 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12842 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12843 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12844 | | beyond, |
12845 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12846 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12847 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12848 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12849 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12850 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12851 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12852 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12853 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12854 | | exclude=exclude) |
12855 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12856 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12857 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12858 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12859 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12860 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12861 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12862 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12863 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12864 | | exclude=exclude) |
12865 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12866 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12867 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12868 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12869 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12870 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12871 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12872 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12873 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12874 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12875 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12876 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12877 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12878 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12879 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12880 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12881 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12882 | | cget(self._c_pointers, n, pointer(values)) |
12883 | | OSError: exception: access violation reading 0x0000000000041468 |
12884 | | |
12885 | | OSError: exception: access violation reading 0x0000000000041468 |
12886 | | |
12887 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12888 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12889 | | cget(self._c_pointers, n, pointer(values)) |
12890 | | |
12891 | | See log for complete Python traceback. |
12892 | | |
12893 | | Traceback (most recent call last): |
12894 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12895 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12896 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12897 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12898 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12899 | | mouse_pause_tracking |
12900 | | self._mouse_pause() |
12901 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12902 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12903 | | m.pause(self._mouse_pause_position) |
12904 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12905 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12906 | | p = self.view.picked_object(x, y) |
12907 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12908 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12909 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12910 | | beyond, |
12911 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12912 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12913 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12914 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12915 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12916 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12917 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12918 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12919 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12920 | | exclude=exclude) |
12921 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12922 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12923 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12924 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12925 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12926 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12927 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12928 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12929 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12930 | | exclude=exclude) |
12931 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12932 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12933 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12934 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12935 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
12936 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
12937 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12938 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
12939 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
12940 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12941 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
12942 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
12943 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12944 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
12945 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
12946 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12947 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12948 | | cget(self._c_pointers, n, pointer(values)) |
12949 | | OSError: exception: access violation reading 0x0000000000041468 |
12950 | | |
12951 | | OSError: exception: access violation reading 0x0000000000041468 |
12952 | | |
12953 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12954 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
12955 | | cget(self._c_pointers, n, pointer(values)) |
12956 | | |
12957 | | See log for complete Python traceback. |
12958 | | |
12959 | | Traceback (most recent call last): |
12960 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12961 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
12962 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
12963 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12964 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
12965 | | mouse_pause_tracking |
12966 | | self._mouse_pause() |
12967 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12968 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
12969 | | m.pause(self._mouse_pause_position) |
12970 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12971 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
12972 | | p = self.view.picked_object(x, y) |
12973 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12974 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
12975 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
12976 | | beyond, |
12977 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12978 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
12979 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
12980 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12981 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12982 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12983 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12984 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12985 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12986 | | exclude=exclude) |
12987 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12988 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12989 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
12990 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12991 | | packages\chimerax\core\models.py", line 126, in first_intercept |
12992 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
12993 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12994 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
12995 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
12996 | | exclude=exclude) |
12997 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
12998 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
12999 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
13000 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13001 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
13002 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
13003 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13004 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
13005 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
13006 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13007 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
13008 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
13009 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13010 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
13011 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
13012 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13013 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13014 | | cget(self._c_pointers, n, pointer(values)) |
13015 | | OSError: exception: access violation reading 0x0000000000041468 |
13016 | | |
13017 | | OSError: exception: access violation reading 0x0000000000041468 |
13018 | | |
13019 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13020 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13021 | | cget(self._c_pointers, n, pointer(values)) |
13022 | | |
13023 | | See log for complete Python traceback. |
13024 | | |
13025 | | Traceback (most recent call last): |
13026 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13027 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
13028 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
13029 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13030 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
13031 | | mouse_pause_tracking |
13032 | | self._mouse_pause() |
13033 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13034 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
13035 | | m.pause(self._mouse_pause_position) |
13036 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13037 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
13038 | | p = self.view.picked_object(x, y) |
13039 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13040 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
13041 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
13042 | | beyond, |
13043 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13044 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
13045 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
13046 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13047 | | packages\chimerax\core\models.py", line 126, in first_intercept |
13048 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
13049 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13050 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
13051 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
13052 | | exclude=exclude) |
13053 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13054 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
13055 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
13056 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13057 | | packages\chimerax\core\models.py", line 126, in first_intercept |
13058 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
13059 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13060 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
13061 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
13062 | | exclude=exclude) |
13063 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13064 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
13065 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
13066 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13067 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
13068 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
13069 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13070 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
13071 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
13072 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13073 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
13074 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
13075 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13076 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
13077 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
13078 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13079 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13080 | | cget(self._c_pointers, n, pointer(values)) |
13081 | | OSError: exception: access violation reading 0x0000000000041468 |
13082 | | |
13083 | | OSError: exception: access violation reading 0x0000000000041468 |
13084 | | |
13085 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13086 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13087 | | cget(self._c_pointers, n, pointer(values)) |
13088 | | |
13089 | | See log for complete Python traceback. |
13090 | | |
13091 | | Traceback (most recent call last): |
13092 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13093 | | packages\chimerax\core\updateloop.py", line 140, in _redraw_timer_callback |
13094 | | self.session.ui.mouse_modes.mouse_pause_tracking() |
13095 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13096 | | packages\chimerax\mouse_modes\mousemodes.py", line 493, in |
13097 | | mouse_pause_tracking |
13098 | | self._mouse_pause() |
13099 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13100 | | packages\chimerax\mouse_modes\mousemodes.py", line 628, in _mouse_pause |
13101 | | m.pause(self._mouse_pause_position) |
13102 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13103 | | packages\chimerax\mouse_modes\std_modes.py", line 779, in pause |
13104 | | p = self.view.picked_object(x, y) |
13105 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13106 | | packages\chimerax\graphics\view.py", line 817, in picked_object |
13107 | | p = self.picked_object_on_segment(xyz1, xyz2, exclude = exclude, beyond = |
13108 | | beyond, |
13109 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13110 | | packages\chimerax\graphics\view.py", line 849, in picked_object_on_segment |
13111 | | p = self.drawing.first_intercept(xyz1, xyz2, exclude=exclude) |
13112 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13113 | | packages\chimerax\core\models.py", line 126, in first_intercept |
13114 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
13115 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13116 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
13117 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
13118 | | exclude=exclude) |
13119 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13120 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
13121 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
13122 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13123 | | packages\chimerax\core\models.py", line 126, in first_intercept |
13124 | | pick = super().first_intercept(mxyz1, mxyz2, exclude=exclude) |
13125 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13126 | | packages\chimerax\graphics\drawing.py", line 1053, in first_intercept |
13127 | | p = self.first_intercept_children(self.child_drawings(), mxyz1, mxyz2, |
13128 | | exclude=exclude) |
13129 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13130 | | packages\chimerax\graphics\drawing.py", line 1070, in first_intercept_children |
13131 | | p = d.first_intercept(cxyz1, cxyz2, exclude=exclude) |
13132 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13133 | | packages\chimerax\atomic\structure.py", line 687, in first_intercept |
13134 | | ppicks = self._position_intercepts(self.positions[pn], mxyz1, mxyz2, exclude) |
13135 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13136 | | packages\chimerax\atomic\structure.py", line 720, in _position_intercepts |
13137 | | p = d.first_intercept(xyz1, xyz2, exclude=exclude) |
13138 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13139 | | packages\chimerax\atomic\pbgroup.py", line 265, in first_intercept |
13140 | | b,f = structure._bond_intercept(self.pseudobonds, mxyz1, mxyz2) |
13141 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13142 | | packages\chimerax\atomic\structure.py", line 2105, in _bond_intercept |
13143 | | cxyz1, cxyz2 = (a1.pb_coords, a2.pb_coords) |
13144 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13145 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13146 | | cget(self._c_pointers, n, pointer(values)) |
13147 | | OSError: exception: access violation reading 0x0000000000041468 |
13148 | | |
13149 | | OSError: exception: access violation reading 0x0000000000041468 |
13150 | | |
13151 | | File "C:\Program Files\ChimeraX\bin\lib\site- |
13152 | | packages\chimerax\atomic\molc.py", line 197, in get_prop |
13153 | | cget(self._c_pointers, n, pointer(values)) |
13154 | | |
13155 | | See log for complete Python traceback. |
13156 | | |
| 2531 | |
| 2532 | [deleted many of these] |
| 2533 | |