| 1 | <!--
|
|---|
| 2 | ChimeraX bundle names must start with "ChimeraX-"
|
|---|
| 3 | to avoid clashes with package names in pypi.python.org.
|
|---|
| 4 | When uploaded to the ChimeraX toolshed, the bundle
|
|---|
| 5 | will be displayed without the ChimeraX- prefix.
|
|---|
| 6 | -->
|
|---|
| 7 |
|
|---|
| 8 | <BundleInfo name="ChimeraX-XMAS"
|
|---|
| 9 | version="1.0.1" package="chimerax.xmas"
|
|---|
| 10 | minSessionVersion="1" maxSessionVersion="1">
|
|---|
| 11 |
|
|---|
| 12 | <!-- Additional information about bundle source -->
|
|---|
| 13 | <Author>I.M. Lagerwaard</Author>
|
|---|
| 14 | <Email>i.m.lagerwaard@students.uu.nl</Email>
|
|---|
| 15 | <URL>https://scheltemalab.wpcomstaging.com/</URL>
|
|---|
| 16 |
|
|---|
| 17 | <!-- Synopsis is a one-line description
|
|---|
| 18 | Description is a full multi-line description -->
|
|---|
| 19 | <Synopsis>Tool to map crosslink data on structural models</Synopsis>
|
|---|
| 20 | <Description>A gui in which a Proteome Discoverer output file containing crosslink data
|
|---|
| 21 | can be selected. From this file, peptide pairs are aligned to structural ChimeraX models. Pseudobonds for
|
|---|
| 22 | perfectly aligning peptide pairs are opened.
|
|---|
| 23 | </Description>
|
|---|
| 24 |
|
|---|
| 25 | <!-- Categories is a list where this bundle should appear -->
|
|---|
| 26 | <Categories>
|
|---|
| 27 | <Category name="General"/>
|
|---|
| 28 | </Categories>
|
|---|
| 29 |
|
|---|
| 30 | <!-- Dependencies on other ChimeraX/Python packages -->
|
|---|
| 31 | <Dependencies>
|
|---|
| 32 | <Dependency name="ChimeraX-Core" version="~=1.1"/>
|
|---|
| 33 | <Dependency name="ChimeraX-UI" version="~=1.0"/>
|
|---|
| 34 | <Dependency name="pandas"/>
|
|---|
| 35 | <Dependency name="openpyxl"/>
|
|---|
| 36 | <Dependency name="matplotlib_venn"/>
|
|---|
| 37 | <Dependency name="seaborn"/>
|
|---|
| 38 | <Dependency name="qtrangeslider"/>
|
|---|
| 39 | </Dependencies>
|
|---|
| 40 |
|
|---|
| 41 | <Classifiers>
|
|---|
| 42 | <!-- Development Status should be compatible with bundle version number -->
|
|---|
| 43 | <PythonClassifier>Development Status :: 3 - Alpha</PythonClassifier>
|
|---|
| 44 | <PythonClassifier>License :: Freeware</PythonClassifier>
|
|---|
| 45 | <!-- ChimeraX classifiers describe supplied functionality -->
|
|---|
| 46 | <!-- Register a graphical interface tool -->
|
|---|
| 47 | <ChimeraXClassifier>ChimeraX :: Tool :: XMAS ::
|
|---|
| 48 | Structure Analysis :: Align crosslinked peptides to structures</ChimeraXClassifier>
|
|---|
| 49 | </Classifiers>
|
|---|
| 50 |
|
|---|
| 51 | </BundleInfo>
|
|---|