Ticket #16222: 2gbp_mmseqs2_pdb.sms

{"hits": [{"pident": 100.0, "evalue": 7.65e-201, "bits": 620, "alnlen": 309, "mismatch": 0, "gapopen": 0, "qstart": 1, "qend": 309, "qlen": 309, "tstart": 1, "tend": 309, "tlen": 309, "qaln": "ADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK", "taln": "ADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK", "pdb_entity_id": "1GLG_1", "pdb_id": "1GLG", "database_id": "1GLG", "database": "pdb", "description": "GALACTOSE/GLUCOSE-BINDING PROTEIN", "taxname": "Escherichia coli", 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305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321]}, {"pident": 21.7, "evalue": 8.011e-16, "bits": 82, "alnlen": 308, "mismatch": 207, "gapopen": 8, "qstart": 2, "qend": 307, "qlen": 309, "tstart": 46, "tend": 321, "tlen": 322, "qaln": "DTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNK-EPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAAN-QGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFS", "taln": "DLKLGVSISTTNNPYFVAMKDGIDKYA-SNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRGSEGGKVLTT------VASDNVAAGKMAADYAVKKLGKKAKAFELSGVPGASATVDRGKGFHSVAKS--------------KLDMLSSQSANFDRAKALNTTQNMIQG--HKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKGDISATIAQQPAKMGEIAIQAAIDYYKGK--------KVEKETISPIYL-VTKDNVEKYN", "pdb_entity_id": "7E7M_1", "pdb_id": "7E7M", "database_id": "7E7M", "database": "pdb", "description": "D-ribose ABC transporter substrate-binding protein", "taxname": "Streptococcus agalactiae ZQ0910", "chain_id": "B", "database_full_id": "7E7M_B", "aligned_residue_offsets": [45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 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"tend": 280, "tlen": 320, "qaln": "RKAIEQDAKAAPD---VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNK---SSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGK", "taln": "RTANTESIKSAAEEAGVNLKFADANGEQEKQISAIRSFIQQGVDVIAFSPVVRTGWDAVLQETKNAGIPVILTDRAVDTQDTDVYKT--FIGADFIEEGRRAGQWVADQYA-------SATGPVNIVQLEGTTGADPAIDRKTGFAEGIS-KNPNLKIVASQTGDFTRSGGKQVMEAFLK--STPQIDVVFAQNDDMGLGAMEAIEAAGKKPGTDIKIVAVDATHDGMQALADGKF-NYIVECNPLLGPELMDLAKKVAAGE", "pdb_entity_id": "6HBM_1", "pdb_id": "6HBM", "database_id": "6HBM", "database": "pdb", "description": "ABC transporter periplasmic-binding protein YtfQ", "taxname": "Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)", "chain_id": "A", "database_full_id": "6HBM_A", "aligned_residue_offsets": [31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 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"bits": 59, "alnlen": 296, "mismatch": 189, "gapopen": 11, "qstart": 20, "qend": 305, "qlen": 309, "tstart": 25, "tend": 294, "tlen": 313, "qaln": "VRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAE---ARTTYVIKELNDKG-IKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKS-SIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPY-----VGVDKDNLAE", "taln": "VKKAESLGAK------VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR-----MINDADIDFYISFDNEKVGELQAKALV---------DIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG-WLPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL--GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD", "pdb_entity_id": "3M9X_1", "pdb_id": "3M9X", "database_id": "3M9X", "database": "pdb", "description": "D-xylose-binding periplasmic protein", "taxname": "Escherichia coli", "chain_id": "A", "database_full_id": "3M9X_A", 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"mismatch": 144, "gapopen": 11, "qstart": 20, "qend": 254, "qlen": 309, "tstart": 40, "tend": 266, "tlen": 309, "qaln": "VRKAIEQDAKA-APDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALA------INLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKA-----YYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEAR---TTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLS-GPNANKIEVVIANNDAMAMGAVEALKAHNK-SSIPVFGVDALPEALALVKSGALAGTV", "taln": "MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKKYKGIAFAPLSSVNLVMPVA------RAWQKGLYLVNLDEKID---MDNLKKAGGNVEGFVTTDNVAVGAKGADFIINKLGAEGG---------EVAIIEGKAGNASGEARRNGATEAFKKANQIKLVASQ----PADWDRIKALDVATNVLQRNPN---LKAFYCANDTMAMGVAQAVANAGKIGKVLVVGTDGIPEARKMVEAGQMTATV", "pdb_entity_id": "8WL5_1", "pdb_id": "8WL5", "database_id": "8WL5", "database": "pdb", "description": "Allose ABC transporter", "taxname": "Enterobacter cloacae", "chain_id": "A", "database_full_id": "8WL5_A", "aligned_residue_offsets": [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 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"MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKKYKGIAFAPLSSVNLVMPVA------RAWQKGLYLVNLDEKID---MDNLKKAGGNVEGFVTTDNVAVGAKGADFIINKLGAEGG---------EVAIIEGKAGNASGEARRNGATEAFKKANQIKLVASQ----PADWDRIKALDVATNVLQRNPN---LKAFYCANDTMAMGVAQAVANAGKIGKVLVVGTDGIPEARKMVEAGQMTATV", "pdb_entity_id": "8WL7_1", "pdb_id": "8WL7", "database_id": "8WL7", "database": "pdb", "description": "Allose ABC transporter", "taxname": "Enterobacter cloacae", "chain_id": "A", "database_full_id": "8WL7_A", "aligned_residue_offsets": [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 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"VRKAIEQDAKA-APDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALA------INLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKA-----YYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEAR---TTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLS-GPNANKIEVVIANNDAMAMGAVEALKAHNK-SSIPVFGVDALPEALALVKSGALAGTV", "taln": "MKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKKYKGIAFAPLSSVNLVMPVA------RAWQKGLYLVNLDEKID---MDNLKKAGGNVEGFVTTDNVAVGAKGADFIINKLGAEGG---------EVAIIEGKAGNASGEARRNGATEAFKKANQIKLVASQ----PADWDRIKALDVATNVLQRNPN---LKAFYCANDTMAMGVAQAVANAGKIGKVLVVGTDGIPEARKMVEAGQMTATV", "pdb_entity_id": "8WL9_1", "pdb_id": "8WL9", "database_id": "8WL9", "database": "pdb", "description": "Allose ABC transporter", "taxname": "Enterobacter cloacae", "chain_id": "A", "database_full_id": "8WL9_A", "aligned_residue_offsets": [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 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"8WLB_1", "pdb_id": "8WLB", "database_id": "8WLB", "database": "pdb", "description": "Allose ABC transporter", "taxname": "Enterobacter cloacae", "chain_id": "A", "database_full_id": "8WLB_A", "aligned_residue_offsets": [39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 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