1 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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2 | REMARK run at = Wed Aug 29 15:29:15 CEST 2018
|
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3 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
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4 | REMARK user = vincent
|
---|
5 | REMARK cmd = \
|
---|
6 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20180515/autoBUS
|
---|
7 | REMARK -p Refine26/refine26-coot-39-isolde6-noH.pdb -m \
|
---|
8 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS \
|
---|
9 | REMARK tls-TMD-NBD.dat -nthreads 16 -R 30 3.95 \
|
---|
10 | REMARK StopOnGellySanityCheckError=no -d Refine31 -nbig 20 -nsmall \
|
---|
11 | REMARK 500
|
---|
12 | REMARK Files used:
|
---|
13 | REMARK PDB = Refine31/pdbchk.pdb
|
---|
14 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
---|
15 | REMARK output written to subdirectory = Refine31
|
---|
16 | REMARK best refinement for F,SIGF with R/Rfree 0.2640/0.2985
|
---|
17 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
---|
18 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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19 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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20 | REMARK run at = Fri Jun 15 13:47:22 CEST 2018
|
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21 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
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22 | REMARK user = vincent
|
---|
23 | REMARK cmd = \
|
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24 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20180515/autoBUS
|
---|
25 | REMARK -p Refine23/ISOLDE-03-13-coot-3_modified2.pdb -m \
|
---|
26 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS \
|
---|
27 | REMARK tls-TMD-NBD.dat -nthreads 16 -R 30 3.95 \
|
---|
28 | REMARK StopOnGellySanityCheckError=no -d Refine26 -nbig 20 -nsmall \
|
---|
29 | REMARK 500
|
---|
30 | REMARK Files used:
|
---|
31 | REMARK PDB = Refine26/pdbchk.pdb
|
---|
32 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
---|
33 | REMARK output written to subdirectory = Refine26
|
---|
34 | REMARK best refinement for F,SIGF with R/Rfree 0.2737/0.3059
|
---|
35 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
---|
36 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
37 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
38 | REMARK run at = Wed May 2 16:06:29 CEST 2018
|
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39 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
---|
40 | REMARK user = vincent
|
---|
41 | REMARK cmd = \
|
---|
42 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20170920/autoBUS
|
---|
43 | REMARK -p Refine20/refine20-coot-4.pdb -m \
|
---|
44 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS -nthreads \
|
---|
45 | REMARK 16 -R 30 3.95 StopOnGellySanityCheckError=no -d Refine21 \
|
---|
46 | REMARK -nbig 20 -nsmall 500
|
---|
47 | REMARK Files used:
|
---|
48 | REMARK PDB = Refine21/pdbchk.pdb
|
---|
49 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
---|
50 | REMARK output written to subdirectory = Refine21
|
---|
51 | REMARK best refinement for F,SIGF with R/Rfree 0.3029/0.3303
|
---|
52 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
---|
53 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
54 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
55 | REMARK run at = Mon Apr 30 12:00:55 CEST 2018
|
---|
56 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
---|
57 | REMARK user = vincent
|
---|
58 | REMARK cmd = \
|
---|
59 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20170920/autoBUS
|
---|
60 | REMARK -p Refine19/refine19-coot-6.pdb -m \
|
---|
61 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS -nthreads \
|
---|
62 | REMARK 16 -R 30 3.95 StopOnGellySanityCheckError=no -d Refine20 \
|
---|
63 | REMARK -nbig 10 -nsmall 500
|
---|
64 | REMARK Files used:
|
---|
65 | REMARK PDB = Refine20/pdbchk.pdb
|
---|
66 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
---|
67 | REMARK output written to subdirectory = Refine20
|
---|
68 | REMARK best refinement for F,SIGF with R/Rfree 0.3303/0.3386
|
---|
69 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
---|
70 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
71 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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72 | REMARK run at = Thu Apr 26 10:57:34 CEST 2018
|
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73 | REMARK in = /xray/veronica/Y-SOLEIL-20180208/BUSTER
|
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74 | REMARK user = veronica
|
---|
75 | REMARK cmd = \
|
---|
76 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20170920/autoBUS
|
---|
77 | REMARK -p Refine12/refine12-coot-18.pdb -m \
|
---|
78 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS -nthreads \
|
---|
79 | REMARK 16 -R 30 3.95 XrayWeight_max=6 StopOnGellySanityCheckError=no
|
---|
80 | REMARK -d Refine19 -nbig 1 -nsmall 500
|
---|
81 | REMARK Files used:
|
---|
82 | REMARK PDB = Refine19/pdbchk.pdb
|
---|
83 | REMARK MTZ = /xray/veronica/Y-SOLEIL-20180208/BUSTER/staraniso_al
|
---|
84 | REMARK output written to subdirectory = Refine19
|
---|
85 | REMARK best refinement for F,SIGF with R/Rfree 0.3479/0.3557
|
---|
86 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
---|
87 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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88 | REMARK --------------------- added by autoBUSTER -------------------------------
|
---|
89 | REMARK run at = Tue Apr 17 11:05:02 CEST 2018
|
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90 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
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91 | REMARK user = vincent
|
---|
92 | REMARK cmd = \
|
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93 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20170920/autoBUS
|
---|
94 | REMARK -p Refine8/refine8-work-polyALA-coot-17.pdb -m \
|
---|
95 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS -nthreads \
|
---|
96 | REMARK 16 -R 30 3.95 StopOnGellySanityCheckError=no -d Refine12 \
|
---|
97 | REMARK -nbig 10
|
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98 | REMARK Files used:
|
---|
99 | REMARK PDB = Refine12/pdbchk.pdb
|
---|
100 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
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101 | REMARK output written to subdirectory = Refine12
|
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102 | REMARK best refinement for F,SIGF with R/Rfree 0.3516/0.3563
|
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103 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
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104 | REMARK --------------------- added by autoBUSTER -------------------------------
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105 | REMARK --------------------- added by autoBUSTER -------------------------------
|
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106 | REMARK run at = Wed Mar 28 09:58:50 CEST 2018
|
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107 | REMARK in = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER
|
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108 | REMARK user = vincent
|
---|
109 | REMARK cmd = \
|
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110 | REMARK /xray/softxtal/LINUX64/BUSTER/BUSTER_snapshot_20170920/autoBUS
|
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111 | REMARK -p ../phaser_6/Y-SOLEIL-xxl_phaser.1.pdb -m \
|
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112 | REMARK staraniso_alldata-Rfree.mtz -autoncs_noprune -TLS -nthreads 8
|
---|
113 | REMARK -R 20 3.95 -d Refine8
|
---|
114 | REMARK Files used:
|
---|
115 | REMARK PDB = Refine8/pdbchk.pdb
|
---|
116 | REMARK MTZ = /xray/vincent/Y-SOLEIL-PX1-20180208/BUSTER/staraniso
|
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117 | REMARK output written to subdirectory = Refine8
|
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118 | REMARK best refinement for F,SIGF with R/Rfree 0.3892/0.3949
|
---|
119 | REMARK header records are copied from input PDB file (apart from REMARK 3!)
|
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120 | REMARK --------------------- added by autoBUSTER -------------------------------
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121 | REMARK TITLE [no title set]
|
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122 | REMARK Log-Likelihood Gain: 626.798
|
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123 | REMARK RFZ=6.8 TFZ=7.5 PAK=0 LLG=139 TFZ==10.5 RF++ TFZ=21.3 PAK=1 LLG=448 TFZ=
|
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124 | REMARK ENSEMBLE ense_1 EULER 85.64 26.78 33.91 FRAC 0.638 -0.995 -0.009
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125 | REMARK ENSEMBLE ense_1 EULER 209.19 65.83 106.96 FRAC -0.316 1.006 0.032
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126 | REMARK 3
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127 | REMARK 3 REFINEMENT.
|
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128 | REMARK 3 PROGRAM : BUSTER 2.10.3
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129 | REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
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130 | REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,WOMACK;
|
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131 | REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD
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132 | REMARK 3
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133 | REMARK 3 DATA USED IN REFINEMENT.
|
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134 | REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.95
|
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135 | REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.21
|
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136 | REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
|
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137 | REMARK 3 COMPLETENESS FOR RANGE (%) : 57.8
|
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138 | REMARK 3 NUMBER OF REFLECTIONS : 20345
|
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139 | REMARK 3
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140 | REMARK 3 FIT TO DATA USED IN REFINEMENT.
|
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141 | REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
|
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142 | REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
|
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143 | REMARK 3 R VALUE (WORKING + TEST SET) : 0.264
|
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144 | REMARK 3 R VALUE (WORKING SET) : 0.261
|
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145 | REMARK 3 FREE R VALUE : 0.303
|
---|
146 | REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990
|
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147 | REMARK 3 FREE R VALUE TEST SET COUNT : 1015
|
---|
148 | REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
|
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149 | REMARK 3
|
---|
150 | REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
|
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151 | REMARK 3 TOTAL NUMBER OF BINS USED : 50
|
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152 | REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.95
|
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153 | REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.17
|
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154 | REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 7.68
|
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155 | REMARK 3 REFLECTIONS IN BIN (WORKING+TEST) : 407
|
---|
156 | REMARK 3 BIN R VALUE (WORKING+TEST) : 0.2265
|
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157 | REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 385
|
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158 | REMARK 3 BIN R VALUE (WORKING SET) : 0.2222
|
---|
159 | REMARK 3 BIN FREE R VALUE : 0.2995
|
---|
160 | REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41
|
---|
161 | REMARK 3 BIN FREE R VALUE TEST SET COUNT : 22
|
---|
162 | REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
|
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163 | REMARK 3
|
---|
164 | REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
|
---|
165 | REMARK 3 PROTEIN ATOMS : 17810
|
---|
166 | REMARK 3 NUCLEIC ACID ATOMS : 0
|
---|
167 | REMARK 3 HETEROGEN ATOMS : 128
|
---|
168 | REMARK 3 SOLVENT ATOMS : 0
|
---|
169 | REMARK 3
|
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170 | REMARK 3 B VALUES.
|
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171 | REMARK 3 FROM WILSON PLOT (A**2) : 178.80
|
---|
172 | REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.39
|
---|
173 | REMARK 3 OVERALL ANISOTROPIC B VALUE.
|
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174 | REMARK 3 B11 (A**2) : -2.45630
|
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175 | REMARK 3 B22 (A**2) : 13.44160
|
---|
176 | REMARK 3 B33 (A**2) : -10.98530
|
---|
177 | REMARK 3 B12 (A**2) : 0.00000
|
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178 | REMARK 3 B13 (A**2) : 13.44470
|
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179 | REMARK 3 B23 (A**2) : 0.00000
|
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180 | REMARK 3
|
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181 | REMARK 3 ESTIMATED COORDINATE ERROR.
|
---|
182 | REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.81
|
---|
183 | REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 1.290
|
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184 | REMARK 3
|
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185 | REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
|
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186 | REMARK 3
|
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187 | REMARK 3 CORRELATION COEFFICIENTS.
|
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188 | REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.601
|
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189 | REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.587
|
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190 | REMARK 3
|
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191 | REMARK 3 X-RAY WEIGHT : 31.66
|
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192 | REMARK 3
|
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193 | REMARK 3 GEOMETRY FUNCTION.
|
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194 | REMARK 3 RESTRAINT LIBRARIES.
|
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195 | REMARK 3 NUMBER OF LIBRARIES USED : 8
|
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196 | REMARK 3 LIBRARY 1 : protgeo_eh99.dat (V1.6.4.11) 20171211 STANDARD
|
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197 | REMARK 3 AMINO ACID DICTIONARY. BONDS AND ANGLES FROM
|
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198 | REMARK 3 ENGH AND HUBER EH99. OTHER VALUES BASED ON
|
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199 | REMARK 3 PREVIOUS TNT OR TAKEN FROM CCP4. INCLUDES
|
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200 | REMARK 3 HYDROGEN ATOMS.
|
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201 | REMARK 3 LIBRARY 2 : exoticaa.dat (V1.3.4.9) 20171211 COLLECTION OF
|
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202 | REMARK 3 NON-STANDARD AMINO ACIDS, MAINLY EH91 WITHOUT
|
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203 | REMARK 3 IDEAL DISTANCE INFO
|
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204 | REMARK 3 LIBRARY 3 : nuclgeo.dat (V1.13.4.5) 20151210
|
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205 | REMARK 3 LIBRARY 4 : bcorrel.dat (V1.15) 20080423
|
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206 | REMARK 3 LIBRARY 5 : contact.dat (V1.15.12.7) 20121002
|
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207 | REMARK 3 LIBRARY 6 : idealdist_contact.dat (V1.3.4.7) 20121011
|
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208 | REMARK 3 IDEAL-DISTANCE CONTACT TERM DATA AS USED IN
|
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209 | REMARK 3 PROLSQ. VALUES USED HERE ARE BASED ON THE REFMAC
|
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210 | REMARK 3 5.5 IMPLEMENTATION.
|
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211 | REMARK 3 LIBRARY 7 : restraints for ATP (ADENOSINE-5_-TRIPHOSPHATE)
|
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212 | REMARK 3 from cif dictionary ATP.cif; buster
|
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213 | REMARK 3 common-compounds v 3.0 (25 Oct 2012) from GRADE
|
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214 | REMARK 3 1.2.0
|
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215 | REMARK 3 LIBRARY 8 : assume.dat (V1.9.4.1) 20110113
|
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216 | REMARK 3
|
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217 | REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
|
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218 | REMARK 3 TERM COUNT WEIGHT FUNCTION.
|
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219 | REMARK 3 BOND LENGTHS : 18206 ; 2.00 ; HARMONIC
|
---|
220 | REMARK 3 BOND ANGLES : 24657 ; 2.00 ; HARMONIC
|
---|
221 | REMARK 3 TORSION ANGLES : 6475 ; 2.00 ; SINUSOIDAL
|
---|
222 | REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL
|
---|
223 | REMARK 3 GENERAL PLANES : 3061 ; 5.00 ; HARMONIC
|
---|
224 | REMARK 3 ISOTROPIC THERMAL FACTORS : 18206 ; 20.00 ; HARMONIC
|
---|
225 | REMARK 3 BAD NON-BONDED CONTACTS : 8 ; 5.00 ; SEMIHARMONIC
|
---|
226 | REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
|
---|
227 | REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
|
---|
228 | REMARK 3 CHIRAL IMPROPER TORSION : 2493 ; 5.00 ; SEMIHARMONIC
|
---|
229 | REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
|
---|
230 | REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
|
---|
231 | REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
|
---|
232 | REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
|
---|
233 | REMARK 3 IDEAL-DIST CONTACT TERM : 21908 ; 4.00 ; SEMIHARMONIC
|
---|
234 | REMARK 3
|
---|
235 | REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
|
---|
236 | REMARK 3 BOND LENGTHS (A) : 0.010
|
---|
237 | REMARK 3 BOND ANGLES (DEGREES) : 1.31
|
---|
238 | REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.62
|
---|
239 | REMARK 3 OTHER TORSION ANGLES (DEGREES) : 25.62
|
---|
240 | REMARK 3
|
---|
241 | REMARK 3 SIMILARITY.
|
---|
242 | REMARK 3 NCS.
|
---|
243 | REMARK 3 NCS METHOD: RESTRAINT LSSR (-AUTONCS)
|
---|
244 | REMARK 3 TARGET RESTRAINTS.
|
---|
245 | REMARK 3 TARGET REPRESENTATION : NONE
|
---|
246 | REMARK 3 TARGET STRUCTURE : NULL
|
---|
247 | REMARK 3
|
---|
248 | REMARK 3 TLS DETAILS.
|
---|
249 | REMARK 3 NUMBER OF TLS GROUPS : 4
|
---|
250 | REMARK 3
|
---|
251 | REMARK 3 TLS GROUP : 1
|
---|
252 | REMARK 3 SET : { A|1 - A|322 B|1 - B|322 }
|
---|
253 | REMARK 3 ORIGIN FOR THE GROUP (A): 35.9552 24.7790 24.0325
|
---|
254 | REMARK 3 T TENSOR
|
---|
255 | REMARK 3 T11: -0.2870 T22: -0.3039
|
---|
256 | REMARK 3 T33: -0.3189 T12: -0.1432
|
---|
257 | REMARK 3 T13: -0.1499 T23: -0.1603
|
---|
258 | REMARK 3 L TENSOR
|
---|
259 | REMARK 3 L11: 0.1349 L22: 4.9053
|
---|
260 | REMARK 3 L33: -0.1059 L12: 2.7418
|
---|
261 | REMARK 3 L13: -0.9343 L23: 3.0698
|
---|
262 | REMARK 3 S TENSOR
|
---|
263 | REMARK 3 S11: -0.1075 S12: -0.1097 S13: 0.5160
|
---|
264 | REMARK 3 S21: 0.5377 S22: -0.2841 S23: -0.2154
|
---|
265 | REMARK 3 S31: -0.5722 S32: 0.5319 S33: 0.3916
|
---|
266 | REMARK 3
|
---|
267 | REMARK 3 TLS GROUP : 2
|
---|
268 | REMARK 3 SET : { C|1 - C|322 D|1 - D|322 }
|
---|
269 | REMARK 3 ORIGIN FOR THE GROUP (A): -40.5223 -23.1551 53.2564
|
---|
270 | REMARK 3 T TENSOR
|
---|
271 | REMARK 3 T11: -0.1275 T22: -0.1313
|
---|
272 | REMARK 3 T33: -0.2859 T12: -0.1432
|
---|
273 | REMARK 3 T13: 0.1587 T23: -0.1603
|
---|
274 | REMARK 3 L TENSOR
|
---|
275 | REMARK 3 L11: 0.1008 L22: 0.8018
|
---|
276 | REMARK 3 L33: -0.0643 L12: 2.8183
|
---|
277 | REMARK 3 L13: -0.8913 L23: 1.7148
|
---|
278 | REMARK 3 S TENSOR
|
---|
279 | REMARK 3 S11: 0.0483 S12: -0.2697 S13: -0.5156
|
---|
280 | REMARK 3 S21: 0.1809 S22: 0.4096 S23: 0.5420
|
---|
281 | REMARK 3 S31: 0.5591 S32: -0.0821 S33: -0.4580
|
---|
282 | REMARK 3
|
---|
283 | REMARK 3 TLS GROUP : 3
|
---|
284 | REMARK 3 SET : { A|336 - A|600 B|336 - B|600 }
|
---|
285 | REMARK 3 ORIGIN FOR THE GROUP (A): 7.5677 -18.8234 8.3227
|
---|
286 | REMARK 3 T TENSOR
|
---|
287 | REMARK 3 T11: -0.2760 T22: -0.3025
|
---|
288 | REMARK 3 T33: -0.0527 T12: -0.1432
|
---|
289 | REMARK 3 T13: -0.1653 T23: -0.1603
|
---|
290 | REMARK 3 L TENSOR
|
---|
291 | REMARK 3 L11: 0.3343 L22: 0.0000
|
---|
292 | REMARK 3 L33: 1.9000 L12: 2.7418
|
---|
293 | REMARK 3 L13: -3.0157 L23: 3.0698
|
---|
294 | REMARK 3 S TENSOR
|
---|
295 | REMARK 3 S11: 0.1026 S12: -0.3401 S13: -0.5276
|
---|
296 | REMARK 3 S21: -0.3151 S22: -0.2170 S23: 0.5273
|
---|
297 | REMARK 3 S31: 0.5373 S32: -0.3587 S33: 0.1145
|
---|
298 | REMARK 3
|
---|
299 | REMARK 3 TLS GROUP : 4
|
---|
300 | REMARK 3 SET : { C|336 - C|600 D|336 - D|600 }
|
---|
301 | REMARK 3 ORIGIN FOR THE GROUP (A): -12.6948 20.6798 70.0209
|
---|
302 | REMARK 3 T TENSOR
|
---|
303 | REMARK 3 T11: -0.2525 T22: -0.3002
|
---|
304 | REMARK 3 T33: -0.1277 T12: -0.1431
|
---|
305 | REMARK 3 T13: -0.1600 T23: -0.1603
|
---|
306 | REMARK 3 L TENSOR
|
---|
307 | REMARK 3 L11: 0.3913 L22: 0.0000
|
---|
308 | REMARK 3 L33: 2.7087 L12: 2.7418
|
---|
309 | REMARK 3 L13: -2.3786 L23: 3.0698
|
---|
310 | REMARK 3 S TENSOR
|
---|
311 | REMARK 3 S11: -0.0604 S12: -0.5029 S13: 0.4424
|
---|
312 | REMARK 3 S21: 0.4913 S22: 0.0990 S23: -0.2685
|
---|
313 | REMARK 3 S31: -0.3718 S32: 0.1457 S33: -0.0386
|
---|
314 | REMARK 3
|
---|
315 | REMARK 3 REFINEMENT NOTES.
|
---|
316 | REMARK 3 NUMBER OF REFINEMENT NOTES : 1
|
---|
317 | REMARK 3 NOTE 1 : IDEAL-DIST CONTACT TERM CONTACT SETUP. RESIDUE
|
---|
318 | REMARK 3 TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=MG. NUMBER
|
---|
319 | REMARK 3 OF ATOMS WITH PROPER CCP4 ATOM TYPE=17934. NUMBER
|
---|
320 | REMARK 3 WITH APPROX DEFAULT CCP4 ATOM TYPE=0. NUMBER
|
---|
321 | REMARK 3 TREATED BY BAD NON-BONDED CONTACTS=4.
|
---|
322 | REMARK 3
|
---|
323 | REMARK 3 OTHER REFINEMENT REMARKS: NULL
|
---|
324 | REMARK 3
|
---|
325 | REMARK 290
|
---|
326 | REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
|
---|
327 | REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
|
---|
328 | REMARK 290
|
---|
329 | REMARK 290 SYMOP SYMMETRY
|
---|
330 | REMARK 290 NNNMMM OPERATOR
|
---|
331 | REMARK 290 1555 X,Y,Z
|
---|
332 | REMARK 290 2555 -X,1/2+Y,-Z
|
---|
333 | REMARK 290
|
---|
334 | REMARK 290 WHERE NNN -> OPERATOR NUMBER
|
---|
335 | REMARK 290 MMM -> TRANSLATION VECTOR
|
---|
336 | REMARK 290
|
---|
337 | REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
|
---|
338 | REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
|
---|
339 | REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
|
---|
340 | REMARK 290 RELATED MOLECULES.
|
---|
341 | REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
|
---|
342 | REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
|
---|
343 | REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
|
---|
344 | REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
|
---|
345 | REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 55.37700
|
---|
346 | REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
|
---|
347 | REMARK 290
|
---|
348 | REMARK 290 REMARK: NULL
|
---|
349 | HELIX 1 1 THR C 381 PHE C 384 1 4
|
---|
350 | CISPEP 1 LYS A 351 PRO A 352 0 -1.48
|
---|
351 | CISPEP 2 SER A 392 PRO A 393 0 -5.91
|
---|
352 | CISPEP 3 SER B 392 PRO B 393 0 -4.92
|
---|
353 | CISPEP 4 LYS C 351 PRO C 352 0 -2.16
|
---|
354 | CISPEP 5 LYS D 351 PRO D 352 0 -1.51
|
---|
355 | CISPEP 6 SER D 392 PRO D 393 0 -5.41
|
---|
356 | CRYST1 117.805 110.754 155.615 90.00 93.23 90.00 P 1 21 1
|
---|
357 | ATOM 1 N GLY C 374 -11.977 31.264 60.470 1.00 21.35 N
|
---|
358 | ATOM 2 CA GLY C 374 -13.310 31.758 60.119 1.00 22.06 C
|
---|
359 | ATOM 3 C GLY C 374 -14.395 31.383 61.114 1.00 20.12 C
|
---|
360 | ATOM 4 O GLY C 374 -14.506 30.196 61.435 1.00 15.69 O
|
---|
361 | ATOM 5 N PRO C 375 -15.221 32.346 61.636 1.00 45.93 N
|
---|
362 | ATOM 6 CA PRO C 375 -16.263 31.969 62.609 1.00 46.70 C
|
---|
363 | ATOM 7 C PRO C 375 -17.278 30.988 62.031 1.00 41.65 C
|
---|
364 | ATOM 8 O PRO C 375 -17.606 31.082 60.840 1.00 16.23 O
|
---|
365 | ATOM 9 CB PRO C 375 -16.889 33.304 63.008 1.00 54.58 C
|
---|
366 | ATOM 10 CG PRO C 375 -16.608 34.194 61.877 1.00 56.37 C
|
---|
367 | ATOM 11 CD PRO C 375 -15.256 33.796 61.377 1.00 50.13 C
|
---|
368 | ATOM 12 N SER C 376 -17.711 30.013 62.884 1.00 40.38 N
|
---|
369 | ATOM 13 CA SER C 376 -18.638 28.892 62.642 1.00 14.11 C
|
---|
370 | ATOM 14 C SER C 376 -19.614 29.102 61.486 1.00 38.21 C
|
---|
371 | ATOM 15 O SER C 376 -20.283 30.136 61.391 1.00 44.50 O
|
---|
372 | ATOM 16 CB SER C 376 -19.391 28.517 63.918 1.00 13.24 C
|
---|
373 | ATOM 17 OG SER C 376 -20.417 27.567 63.687 1.00 36.39 O
|
---|
374 | ATOM 18 N GLY C 377 -19.671 28.099 60.622 1.00 6.82 N
|
---|
375 | ATOM 19 CA GLY C 377 -20.525 28.107 59.443 1.00 34.78 C
|
---|
376 | ATOM 20 C GLY C 377 -19.929 28.899 58.303 1.00 38.46 C
|
---|
377 | ATOM 21 O GLY C 377 -20.661 29.426 57.459 1.00 39.68 O
|
---|
378 | ATOM 22 N GLY C 378 -18.603 28.968 58.286 1.00 40.48 N
|
---|
379 | ATOM 23 CA GLY C 378 -17.867 29.694 57.270 1.00 44.73 C
|
---|
380 | ATOM 24 C GLY C 378 -17.821 28.939 55.967 1.00 14.87 C
|
---|
381 | ATOM 25 O GLY C 378 -18.674 29.127 55.096 1.00 8.65 O
|
---|
382 | ATOM 26 N GLY C 379 -16.832 28.070 55.861 1.00 6.83 N
|
---|
383 | ATOM 27 CA GLY C 379 -16.584 27.268 54.673 1.00 5.85 C
|
---|
384 | ATOM 28 C GLY C 379 -15.196 26.662 54.676 1.00 5.23 C
|
---|
385 | ATOM 29 O GLY C 379 -14.665 26.292 53.617 1.00 5.29 O
|
---|
386 | ATOM 30 N LYS C 380 -14.608 26.549 55.888 1.00 4.83 N
|
---|
387 | ATOM 31 CA LYS C 380 -13.270 25.988 56.113 1.00 4.34 C
|
---|
388 | ATOM 32 C LYS C 380 -13.266 24.502 55.720 1.00 3.00 C
|
---|
389 | ATOM 33 O LYS C 380 -12.822 24.184 54.618 1.00 3.00 O
|
---|
390 | ATOM 34 CB LYS C 380 -12.803 26.193 57.575 1.00 4.41 C
|
---|
391 | ATOM 35 CG LYS C 380 -13.111 27.577 58.163 1.00 6.05 C
|
---|
392 | ATOM 36 CD LYS C 380 -12.684 27.700 59.623 1.00 6.44 C
|
---|
393 | ATOM 37 CE LYS C 380 -13.565 26.933 60.584 1.00 5.11 C
|
---|
394 | ATOM 38 NZ LYS C 380 -12.910 26.690 61.895 1.00 5.22 N
|
---|
395 | ATOM 39 N THR C 381 -13.847 23.621 56.566 1.00 3.00 N
|
---|
396 | ATOM 40 CA THR C 381 -13.927 22.185 56.321 1.00 3.00 C
|
---|
397 | ATOM 41 C THR C 381 -14.333 21.868 54.888 1.00 3.00 C
|
---|
398 | ATOM 42 O THR C 381 -13.611 21.109 54.240 1.00 3.00 O
|
---|
399 | ATOM 43 CB THR C 381 -14.960 21.560 57.277 1.00 3.00 C
|
---|
400 | ATOM 44 OG1 THR C 381 -16.239 22.144 57.023 1.00 3.00 O
|
---|
401 | ATOM 45 CG2 THR C 381 -14.551 21.840 58.725 1.00 3.00 C
|
---|
402 | ATOM 46 N THR C 382 -15.431 22.491 54.368 1.00 3.00 N
|
---|
403 | ATOM 47 CA THR C 382 -15.904 22.273 52.986 1.00 3.00 C
|
---|
404 | ATOM 48 C THR C 382 -14.760 22.411 51.995 1.00 3.00 C
|
---|
405 | ATOM 49 O THR C 382 -14.559 21.499 51.193 1.00 3.00 O
|
---|
406 | ATOM 50 CB THR C 382 -17.058 23.201 52.588 1.00 3.00 C
|
---|
407 | ATOM 51 CG2 THR C 382 -18.336 22.921 53.350 1.00 3.00 C
|
---|
408 | ATOM 52 OG1 THR C 382 -16.645 24.555 52.748 1.00 3.00 O
|
---|
409 | ATOM 53 N LEU C 383 -13.960 23.497 52.113 1.00 3.00 N
|
---|
410 | ATOM 54 CA LEU C 383 -12.816 23.746 51.246 1.00 3.57 C
|
---|
411 | ATOM 55 C LEU C 383 -11.803 22.601 51.205 1.00 3.00 C
|
---|
412 | ATOM 56 O LEU C 383 -11.247 22.329 50.145 1.00 3.22 O
|
---|
413 | ATOM 57 CB LEU C 383 -12.139 25.050 51.606 1.00 5.17 C
|
---|
414 | ATOM 58 CG LEU C 383 -11.517 25.744 50.429 1.00 10.05 C
|
---|
415 | ATOM 59 CD1 LEU C 383 -12.104 27.128 50.248 1.00 11.50 C
|
---|
416 | ATOM 60 CD2 LEU C 383 -10.014 25.763 50.546 1.00 15.02 C
|
---|
417 | ATOM 61 N PHE C 384 -11.609 21.900 52.328 1.00 3.00 N
|
---|
418 | ATOM 62 CA PHE C 384 -10.677 20.772 52.428 1.00 3.00 C
|
---|
419 | ATOM 63 C PHE C 384 -11.194 19.515 51.780 1.00 3.00 C
|
---|
420 | ATOM 64 O PHE C 384 -10.404 18.730 51.263 1.00 3.00 O
|
---|
421 | ATOM 65 CB PHE C 384 -10.265 20.533 53.876 1.00 3.00 C
|
---|
422 | ATOM 66 CG PHE C 384 -9.540 21.754 54.363 1.00 3.00 C
|
---|
423 | ATOM 67 CD1 PHE C 384 -8.182 21.913 54.125 1.00 3.00 C
|
---|
424 | ATOM 68 CD2 PHE C 384 -10.236 22.809 54.938 1.00 3.00 C
|
---|
425 | ATOM 69 CE1 PHE C 384 -7.520 23.087 54.505 1.00 6.54 C
|
---|
426 | ATOM 70 CE2 PHE C 384 -9.587 23.996 55.279 1.00 3.53 C
|
---|
427 | ATOM 71 CZ PHE C 384 -8.228 24.125 55.071 1.00 7.35 C
|
---|
428 | TER 72 PHE C 384
|
---|
429 | HETATM 73 PA ATP I 4 -18.274 23.902 57.008 1.00 20.00 P
|
---|
430 | HETATM 74 PB ATP I 4 -16.830 25.474 58.937 1.00 20.00 P
|
---|
431 | HETATM 75 PG ATP I 4 -16.635 25.050 61.855 1.00 20.00 P
|
---|
432 | HETATM 76 C5' ATP I 4 -20.299 25.178 55.866 1.00 20.00 C
|
---|
433 | HETATM 77 O5' ATP I 4 -19.734 23.928 56.304 1.00 20.00 O
|
---|
434 | HETATM 78 C4' ATP I 4 -21.809 25.192 55.867 1.00 20.00 C
|
---|
435 | HETATM 79 O4' ATP I 4 -22.342 24.306 54.867 1.00 20.00 O
|
---|
436 | HETATM 80 C3' ATP I 4 -22.557 24.769 57.124 1.00 20.00 C
|
---|
437 | HETATM 81 O3' ATP I 4 -22.540 25.772 58.131 1.00 20.00 O
|
---|
438 | HETATM 82 C2' ATP I 4 -23.980 24.593 56.586 1.00 20.00 C
|
---|
439 | HETATM 83 O2' ATP I 4 -24.672 25.841 56.585 1.00 20.00 O
|
---|
440 | HETATM 84 C1' ATP I 4 -23.728 24.157 55.130 1.00 20.00 C
|
---|
441 | HETATM 85 N1 ATP I 4 -22.505 19.129 54.991 1.00 20.00 N
|
---|
442 | HETATM 86 O1A ATP I 4 -17.961 22.589 57.606 1.00 20.00 O
|
---|
443 | HETATM 87 O1B ATP I 4 -16.806 26.944 59.106 1.00 20.00 O
|
---|
444 | HETATM 88 O1G ATP I 4 -15.568 24.338 62.593 1.00 20.00 O
|
---|
445 | HETATM 89 C2 ATP I 4 -21.838 20.190 55.460 1.00 20.00 C
|
---|
446 | HETATM 90 O2A ATP I 4 -17.203 24.222 55.980 1.00 20.00 O
|
---|
447 | HETATM 91 O2B ATP I 4 -15.654 25.044 58.111 1.00 20.00 O
|
---|
448 | HETATM 92 O2G ATP I 4 -16.454 26.546 61.895 1.00 20.00 O
|
---|
449 | HETATM 93 N3 ATP I 4 -22.213 21.474 55.476 1.00 20.00 N
|
---|
450 | HETATM 94 O3A ATP I 4 -18.121 25.034 58.117 1.00 20.00 O
|
---|
451 | HETATM 95 O3B ATP I 4 -16.723 24.668 60.309 1.00 20.00 O
|
---|
452 | HETATM 96 O3G ATP I 4 -17.999 24.773 62.461 1.00 20.00 O
|
---|
453 | HETATM 97 C4 ATP I 4 -23.437 21.628 54.943 1.00 20.00 C
|
---|
454 | HETATM 98 C5 ATP I 4 -24.249 20.628 54.432 1.00 20.00 C
|
---|
455 | HETATM 99 C6 ATP I 4 -23.736 19.316 54.456 1.00 20.00 C
|
---|
456 | HETATM 100 N6 ATP I 4 -24.393 18.259 53.980 1.00 20.00 N
|
---|
457 | HETATM 101 N7 ATP I 4 -25.457 21.150 53.997 1.00 20.00 N
|
---|
458 | HETATM 102 C8 ATP I 4 -25.348 22.433 54.244 1.00 20.00 C
|
---|
459 | HETATM 103 N9 ATP I 4 -24.151 22.795 54.806 1.00 20.00 N
|
---|
460 | HETATM 104 MG MG J 4 -15.185 23.572 59.839 1.00 30.00 Mg
|
---|
461 | CONECT 61 62 55
|
---|
462 | CONECT 62 61 65 63
|
---|
463 | CONECT 63 62 64
|
---|
464 | CONECT 64 63
|
---|
465 | CONECT 65 62 66
|
---|
466 | CONECT 66 65 67 68
|
---|
467 | CONECT 67 66 69
|
---|
468 | CONECT 68 66 70
|
---|
469 | CONECT 69 67 71
|
---|
470 | CONECT 70 68 71
|
---|
471 | CONECT 71 69 70
|
---|
472 | CONECT 73 77 86 90 94
|
---|
473 | CONECT 74 87 91 94 95
|
---|
474 | CONECT 75 88 92 95 96
|
---|
475 | CONECT 76 77 78
|
---|
476 | CONECT 77 73 76
|
---|
477 | CONECT 78 76 79 80
|
---|
478 | CONECT 79 78 84
|
---|
479 | CONECT 80 78 81 82
|
---|
480 | CONECT 81 80
|
---|
481 | CONECT 82 80 83 84
|
---|
482 | CONECT 83 82
|
---|
483 | CONECT 84 79 82 103
|
---|
484 | CONECT 85 89 99
|
---|
485 | CONECT 86 73
|
---|
486 | CONECT 87 74
|
---|
487 | CONECT 88 75
|
---|
488 | CONECT 89 85 93
|
---|
489 | CONECT 90 73
|
---|
490 | CONECT 91 74
|
---|
491 | CONECT 92 75
|
---|
492 | CONECT 93 89 97
|
---|
493 | CONECT 94 73 74
|
---|
494 | CONECT 95 74 75
|
---|
495 | CONECT 96 75
|
---|
496 | CONECT 97 93 98 103
|
---|
497 | CONECT 98 97 99 101
|
---|
498 | CONECT 99 85 98 100
|
---|
499 | CONECT 100 99
|
---|
500 | CONECT 101 98 102
|
---|
501 | CONECT 102 101 103
|
---|
502 | CONECT 103 84 97 102
|
---|
503 | END
|
---|