[Chimera-users] Saving .pdb file in location of .mrc file

[Elaine Meng]

For the others on the list,
although I’m not sure what solution you hit upon, the issue is discussed here, in “Saving Maps after Fitting” (bottom of page):

<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting>

Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jun 25, 2019, at 6:49 PM, Ryan Harlich <ryanharlich at hotmail.com> wrote:
> 
> Hi Chimera,
>  
> I was able to figure this out after several hours. You can disregard the below email.
>  
> Best,
> Ryan Harlich
>  
> Sent from Mail for Windows 10
>  
> From: Ryan Harlich
> Sent: Tuesday, June 25, 2019 4:46:11 PM
> To: chimera-users at cgl.ucsf.edu
> Subject: Saving .pdb file in location of .mrc file
>  
> Hi Chimera,
>  
> I am having a bit of difficulty figuring out how to move the location of a map and save it in that location. I am able to move it but when I save and reopen it is back to where it is. I see I can use molmap and use onGrid to achieve this but this overwrites gridSpacing 1 which is crucial as I need to set the resolution to 1.
>  
> So the problem is when I save a molmap with gridSpacing after performing move cofr and reopen it, it is not in the location of my .mrc. If I use onGrid I cannot achieve gridSpacing 1.
>  
> An alternative if possible would be to have the .ent/.pdb saved to the new location where the .mrc density map is and reopened to this same location because then I can do the rest from there.
>  
> Best,
> Ryan Harlich
>  
> Sent from Mail for Windows 10
>  
> _______________________________________________
> Chimera-users mailing list: Chimera-users at cgl.ucsf.edu
> Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users