[Chimera-users] Coordinates of atoms and volumes

[Michał Kadlof]

Thank you, and how can I get the value of volume in the point where marker
is?

--
pozdrawiam serdecznie
Michał Kadlof <m.kadlof at cent.uw.edu.pl>

2017-11-16 19:17 GMT+01:00 Tom Goddard <goddard at sonic.net>:

> The Chimera getcrd command will report atom coordinates.  In Python code
> you can get the coordinates for atom a with a.coord or a.xformCoord if you
> want to include the viewing direction.
>
> To specify a point in a density map you usually put a marker on it with
> the Volume Tracer.  A marker is actually and atom so getcrd works for that.
>
> Tom
>
>
> On Nov 16, 2017, at 3:36 AM, Michał Kadlof <m.kadlof at cent.uw.edu.pl>
> wrote:
>
> Hi,
>
> 1. is there any way to get the exact Cartesian coordinates of any atom
> directly in Chimera?
>
> 2. Is there any way to get exact value from exact place inside density
> volumetric data?
>
> --
> ​best wishes​
>
> Michał Kadlof <m.kadlof at cent.uw.edu.pl>
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