[Chimera-users] Joining models question

[Kyle J. Lauersen]

Thanks Elaine. 

I was omitting the .A. Since they only had one chain I didn't think it was required. But it's working now. 

Best,

Kyle

Dr. Kyle J. Lauersen
Algae Biotechnology & Bioenergy
Center for Biotechnology
Bielefeld University
p: +49 (0) 521 106 12261
e: kyle.lauersen at uni-bielefeld.de

> On 29.01.2016, at 20:43, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi Kyle,
> The following works for me:
> 
> I opened YFP and PcPs in that order, then:
> 
> commands: 
> ~ribbon
> disp @n,ca,c
> sel #1:559.a at C #0:2.a at N
> 
> menu: Tools….Structure Editing… Build Structure, change to Join Models section of the resulting dialog.
> 
> Then I chose the “C-N peptide bond” option and clicked Apply, and the join appears to take place successfully.
> 
> However, I see your point that something weird is going on:  I repeated the process several times, and sometimes (but not always!!) if I didn’t change from ribbon to atom display, the Apply button was grayed out.  We should look into why that is happening.
> 
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
> 
>> On Jan 29, 2016, at 5:33 AM, Kyle J. Lauersen <kyle.lauersen at uni-bielefeld.de> wrote:
>> 
>> Hello,
>> 
>> I am trying to join the two models attached to this sequence.
>> 
>> I have used the sequence selection code in atom specifier: #1:559.a at C #0:2.a at N
>> 
>> Where model #0 is YFP and #1 is PcPs.
>> 
>> When I go to join models, the Apply button is not accessible.
>> 
>> Can you indicate if I am doing something incorrect in the selection of the C and N atoms?
>> 
>> Thank you for your time.
>> 
>> Kyle
>> 
>> <YFP.pdb>
>> <PcPs.pdb>
>> 
>> Dr. Kyle J. Lauersen
>> Algae Biotechnology & Bioenergy 
>> Center for Biotechnology 
>> Bielefeld University 
>> p: +49 (0) 521 106 12289
>> e: kyle.lauersen at uni-bielefeld.de
>> 
>> _______________________________________________
>> Chimera-users mailing list
>> Chimera-users at cgl.ucsf.edu
>> http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users
> 
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