[Chimera-users] Creating a cubic box for a density map

[Tom Goddard]

Hi Juan,

  The Chimera Segger dialog menu entry Regions / Extract Densities let’s you make cube shaped maps for selected segmented regions.  I guess you were using Segger menu File / Save Selected Regions which does not give that option.

	Tom


> On Jan 18, 2015, at 7:55 AM, Juan Luis Loredo Varela <jlvl500 at york.ac.uk> wrote:
> 
> Dear Chimera users
> 
> When I use the Segment map option to save a specific fragment as .mrc file, Chimera uses the minimal box containing the segment. Does anyone know how to modify the dimensions of a density map to have it in a cubic box that can be used in Flex-EM?
> 
> Thanks
> 
> Juan
> 
> 
> 
> -- 
> Juan Luis Loredo Varela
> 
> PhD Student
> Antson Group
> York Structural Biology Laboratory L0
> Department of Chemistry
> University of York
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