[Chimera-users] MODELLER interface

Elaine Meng meng at cgl.ucsf.edu
Fri Sep 17 15:49:22 PDT 2010


Hi Domenico,
How to show the MODELLER interface is described in those documentation links I sent.
>>   Here's the documentation, which is also included with the build:
>> 
>> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/multalignviewer/multalignviewer.html#modeller>
>> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/multalignviewer/modeller.html>

To summarize, you would start it from the Structure menu in Multalign Viewer, the dialog that shows sequence alignments.  IThe top link above describes how to get a sequence alignment if you don't have one already.

However, it is also possible that you didn't get a new enough daily build.  Earlier today one of the Mac builds in that table was older than that date, but I see that some more builds have now become available, and now all are new enough (Sept 17 for all platforms):
>> <http://www.cgl.ucsf.edu/chimera/download.html#daily>

> 


Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco



On Sep 17, 2010, at 10:51 AM, Domenico Raimondo wrote:

> Thanks a lot.
> just a question, I downloaded 	chimera version for Mac OS X 10.5 and 10.6, X Windows, but I am not able to find it! As I often use modeller i want to try it! 
> Thanks,
> Domenico.
> 
> On 17/set/10, at 19:19, Elaine Meng wrote:
> 
>> Hi Domenico,
>> Yes, we are pleased to announce this feature -- it is only in the very latest daily builds, I believe dated Sept 14 and newer.
>> <http://www.cgl.ucsf.edu/chimera/download.html#daily>
>> 
>> 
>> Best
>> Elaine
>> -----
>> Elaine C. Meng, Ph.D.                       
>> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
>> Department of Pharmaceutical Chemistry
>> University of California, San Francisco
>> 
>> On Sep 17, 2010, at 6:29 AM, Domenico Raimondo wrote:
>> 
>>> Hi,
>>> I have found on the MODELLER web page that Chimera has a Modeller interface in the latest nightly builds. Is it right? and is it possible to use it?
>>> Thanks a lot,
>>> Domenico.
>> 
> 
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> Chimera-users at cgl.ucsf.edu
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