[Chimera-users] problems reading .rec file

Elaine Meng meng at cgl.ucsf.edu
Tue May 25 15:54:06 PDT 2010


Hi Matt,
There is a Volume Viewer setting that just shows 1 plane at first if  
the dataset is bigger than some cutoff.

In the Volume Viewer "Features" menu,
- choose "Planes" to put plane options in the dialog, then click All  
to show all planes
- to control initial display, choose "Data display options" to put  
those options in the dialog, then turn the "show plane..." option off  
or change the cutoff size

<http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/volumeviewer.html#features 
 >
<http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/volumeviewer.html#planes 
 >
<http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/volumeviewer.html#disp-options 
 >

I hope this helps,
ELaine
-----
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On May 24, 2010, at 3:00 PM, Shawkey,Matthew D wrote:

> Hi,
> I have a .rec density map 2000x2000x1000 (xyz) but when i open it in  
> Chimera it only shows the first image of the series (i.e. the  
> dimensions are 2000x2000x1). do i need to convert it to a different  
> format?
> thanks
> Matt




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