[Chimera-users] problems reading .rec file
Tom Goddard
goddard at cgl.ucsf.edu
Tue May 25 15:52:19 PDT 2010
Hi Matt,
That is normal Chimera behavior. If you open a large volume file it
shows just one plane and there is a slider in the volume dialog to flip
through planes. This is to allow fast initial display. If you want to
display all planes press the "All" button below the Planes slider. The
volume size at which only a single plane is shown is controlled by the
volume dialog setting under "data display options" called "show plane
when data larger than X voxels". I think the default is 256 million
voxels (grid points). You can change that and save the default volume
dialog settings (menu entry at bottom of Features menu).
With a 4 Gvoxel map (2000x2000x1000) Chimera is going to of course
subsample the data, i.e. volume step size is going to be greater than 1
if you try to show the full data.
Tom
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