[Chimera-users] save manipulated electron density maps in spider

Elaine Meng meng at cgl.ucsf.edu
Mon Feb 25 09:43:42 PST 2008


Dear Jan-Christian,
You can save BRIX format from recent versions of Chimera, with  
"File... Save map as" in the Volume Viewer menu or with the "volume"  
command.
http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/ 
volumeviewer.html#organization
http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/volume.html

Probably you just need to get a newer version!  This ability was  
added after the Nov 2007 release.  Try getting the snapshot from this  
month:
http://www.cgl.ucsf.edu/chimera/download.html#snapshots

Best,
Elaine
-----
Elaine C. Meng, Ph.D.                          meng at cgl.ucsf.edu
UCSF Computer Graphics Lab and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco
                      http://www.cgl.ucsf.edu/home/meng/index.html




On Feb 25, 2008, at 6:52 AM, Jan-Christian Schuette wrote:

> Dear Chimera Developers,
>
> I quite often have to manipulate electron density maps in the spider
> format. When using chimeras volume eraser function, it doesn't  
> allow me
> to save the new map back to spider or another easy-to-convert file
> format (such as brix or ccp4).
>
> I would be great if you could add such a feature in the next  
> version of
> the software.
>
> Best regards,
>
> Jan-Christian Schuette
>
> _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users




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