[Chimera-users] discontinuous ribbon for nuc. structure

[bala]

Hello,

While i make the ribbon representation for an RNA duplex, sometimes ribbon is discontinuous in between, what could be the reason for it ?
I hve two conformation sof the same duplex taken at 1ns interval from MD trajectory.  For one conformation, ribbon is continuous but for the other there is a discontinuity at the middle.. I analysed the structure, it seems ok.

thanks in advance,
Bala

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