[chimera-dev] Chimera Error

[Elaine Meng]

HI Vishakha Kamble
First thing is to try getting a newer version of Chimera.  In Chimera 1.15 release version I can minimize 5ulp chain A with no problems -- it automatically removes an extra hydrogen from the VAL which is probably the same one causing your error.

In the future if you have a Chimera error with specific data, do not e-mail here.  Instead use Help... Report a Bug (in the Chimera menu) and attach the data file or a session file so that we can actually take a look at it.  This bug reporting method sends information about the Chimera version and type of computer you are using, which is often needed to solve the problem. This e-mail address  is for questions about programming Chimera, e.g. writing code.

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On May 1, 2021, at 4:57 AM, Vishakha Kamble <kamblevishakha78 at gmail.com> wrote:
> 
> Dear Sir/Madam,
> I am facing this error while doing Minimization step on my protein.(5ULP)
> "Correct charges are unknown for 1 non-standard atom names in otherwise standard residues
> 
> Charges of 0.0 were assigned to the unknown atoms
> 
> Details in reply log
> 
> No MMTK name for atom "HXT" in standard residue "VAL" "
> 
> Please could you help me solve this issue
> Thanks & Regards
> Vishakha Kamble