[Chimera-users] crystal contacts
meng at cgl.ucsf.edu
Mon May 9 10:55:59 PDT 2022
If you use the command "crystalcontacts" there is an option to list the residues in the Reply Log, for example, if your structure is open as model #0 and you want to use distance 2.5 Angstroms:
crystalcontacts #0 2.5 residueInfo true
See command help and list of options:
If you are considering switching to ChimeraX, note that ChimeraX also has a Crystal Contacts tool and a "crystalcontacts" command with the residueInfo option.
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On May 9, 2022, at 9:55 AM, Meital Bachar via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> my name is Meital and I am a Ph.D. student at the school of chemistry at Tel-Aviv university.
> i am trying to identify the crystal contacts of a protein that I am studying.
> and I was wondering if it is possible to get an output for the calculated crystal contacts in a way that the actual residues are listed.
> appreciate a lot your response.
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