[Chimera-users] Icosaedron coordinates

[Yasser Almeida]

Great, thanks!

El mar., 30 jun. 2020 a las 17:09, Elaine Meng (<meng at cgl.ucsf.edu>)
escribió:

> Hi Yasser,
> You can change the vertices and edges in the icosahedron surface into a
> "molecule" (dummy atoms and bonds) with the "meshmol" command, and then
> save the resulting coordinates as a PDB file.
>
> For example, if your icosahedron surface is #0, command:
>
> meshmol #0 0.25
>
> ...for bond stick-display radius 0.25; you could use some other number,
> doesn't really matter if the purpose is to save coordinates. That will
> create a new molecule model with name "Mesh Icosahedron."
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/meshmol.html>
>
> ...and then use command "write" or menu: File... Save PDB to save that
> molecule model.
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#pdb>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Jun 30, 2020, at 3:05 AM, Yasser Almeida <yasser.almeida at gmail.com>
> wrote:
> >
> > Hello,
> > I am using the icosahedron surface tool to build a triangulated sphere
> cage around a model. How can I write its coordinates?
> > Thanks in advance,
> > Yasser
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20200630/6e487d21/attachment.html>