[Chimera-users] ViewDock problem

Elaine Meng meng at cgl.ucsf.edu
Thu Jul 30 08:31:11 PDT 2020

Hi Denis,
It's a little hard to see when you have the molecular surface also shown, but I'm guessing you need to turn on the H-Bond option "If endpoint atom hidden, show endpoint residue"


This is because the H-bond line can't be shown unless the atoms on both of its ends are shown.  That option will show more residues of the receptor so that all of the identified H-bonds will be shown.

Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jul 30, 2020, at 5:20 AM, Krivic, Denis <denis.krivic at medunigraz.at> wrote:
> Hello,
> Does anybody know why the viewdock calculates Hbonds, but doesn't want to show them (in some cases-picture, not always)?
> Kind regards,
> Denis

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