[Chimera-users] Volume information from segmentation data

Juleen Dickson jdickson6 at gmail.com
Mon Dec 14 07:58:28 PST 2020

Good Morning Everyone,

I fear the answer to my question is probably 'no' but I wanted to ask the
experts first. I have segmentation of vesicles that I did from a cryo-EM
tomogram that I did in EMAN2. I can open the segmentations and view them in
chimera, however, I wanted to find a way to extract volume and surface area
data on the segmentations so I can do statistics on them. If I use the
Volume--> Measure and color blobs, the individual blob information will
show up in the log. I am not sure if this information is accurate.  Is
there away to do this for all of the vesicles and download the data, maybe
with the volume--> Segment map? If so, how do I do it? Thanks for your help.


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