[Chimera-users] Fetch by ID
sette at uniroma2.it
Fri Nov 8 04:52:18 PST 2019
no problems with the new version indeed.
Thanks a lot,
Il 07/11/19 18:46, Eric Pettersen ha scritto:
> In addition to what Elaine says, you need to upgrade your version of
> Chimera to at least 1.13.1. The UniProt web site changed not that
> long ago and previous versions of Chimera aren’t compatible with those
> Eric Pettersen
> UCSF Computer Graphics Lab
>> On Nov 7, 2019, at 7:30 AM, Elaine Meng <meng at cgl.ucsf.edu
>> <mailto:meng at cgl.ucsf.edu>> wrote:
>> Hi Marco,
>> Did you check that ID at the UniProt website? I tried these
>> fetches that I’d never done before (so the files weren’t already
>> cached locally) and they worked fine.
>> open uniprot:DMD_HUMAN
>> open uniprot:P08069
>> So maybe the ID that you entered is obsolete. If you can see that
>> specific entry at the UniProt database but the fetch doesn’t work,
>> then you would have to let us know what ID you used.
>> I hope this helps,
>> Elaine C. Meng, Ph.D.
>> UCSF Chimera(X) team
>> Department of Pharmaceutical Chemistry
>> University of California, San Francisco
>>> On Nov 7, 2019, at 6:16 AM, Marco Sette <sette at uniroma2.it
>>> <mailto:sette at uniroma2.it>> wrote:
>>> Dear all,
>>> i'm experiencing some problems with the Fetch by ID on the Uniprot
>>> The error message is
>>> Invalid Uniprot accessio number: "about: legacy-compat"
>>> The Fetch by ID onto the PDB database works fine.
>>> Any suggestions?
>> Chimera-users mailing list: Chimera-users at cgl.ucsf.edu
>> <mailto:Chimera-users at cgl.ucsf.edu>
>> Manage subscription:
Dr.Marco Sette, Ph.D.
Department of Chemical Sciences and Technology
University of Rome, "Tor Vergata"
via della Ricerca Scientifica, 00133, Rome, Italy
e-mail: sette at uniroma2.it
e-mail: m77it at yahoo.it
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